Pregenerated sensors for LINC00456 (Homo sapiens)
Ensembl gene IDs: ENSG00000233124Ensembl transcript IDs: ENST00000453862.1, ENST00000657031.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GACAGGTTACAGAAGGTGTCCCAAATCACCAAAGACAGAAAGTGCTaGAGCCTAGACCTGCAGCTGTGTCCTTTGTGGGCAAAGGTCGTC | + |
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Preference number: 5 (lower is better) Translates to: DRLQKVSQITKDRKC*SLDLQLCPLWAKVV Trigger: GACGACCTTTGCCCACAAAGGACACAGCTGCAGGTCTAGGCTCCAGCACTTTCTGTCTTTGGTGATTTGGGACACCTTCTGTAACCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | TTTGCTCGGCTCTCATTCTCTCTTTGCCTGCTGCTATGTAAGATGTaGCTTTTGCCTTCCACCATGATTGTGATGCCTCCCCAGCCACGT | + |
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Preference number: 5 (lower is better) Translates to: FARLSFSLCLLLCKM*LLPSTMIVMPPQPR Trigger: ACGTGGCTGGGGAGGCATCACAATCATGGTGGAAGGCAAAAGGCACATCTTACATAGCAGCAGGCAAAGAGAGAATGAGAGCCGAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | GTTAGGGATTTTACAAAGGAAGTTTGGGGGTGGCTAGGCAGTGGGTaGTTGCTGCTGATTGGTTGGGTTGGAGGTGAAATCATAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: VRDFTKEVWGWLGSG*LLLIGWVGGEIIGA Trigger: AGCTCCTATGATTTCACCTCCAACCCAACCAATCAGCAGCAAGCACCCACTGCCTAGCCACCCCCAAACTTCCTTTGTAAAATCCCTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | TTAGACAGGTTACAGAAGGTGTCCCAAATCACCAAAGACAGAAAGTaGTGGAGCCTAGACCTGCAGCTGTGTCCTTTGTGGGCAAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LDRLQKVSQITKDRK*WSLDLQLCPLWAKV Trigger: GACCTTTGCCCACAAAGGACACAGCTGCAGGTCTAGGCTCCAGCACTTTCTGTCTTTGGTGATTTGGGACACCTTCTGTAACCTGTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 90 bp | TTGCACTTCCTTAACCTAGGTTCCTGTCTGGACTGTCTTCTGGGCTaGTTCCTTAGCAAAGTGCTTTCTCCCTGCTTCCCTGGACTTAAA | + |
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Preference number: 5 (lower is better) Translates to: LHFLNLGSCLDCLLG*FLSKVLSPCFPGLK Trigger: TTTAAGTCCAGGGAAGCAGGGAGAAAGCACTTTGCTAAGGAATCAGCCCAGAAGACAGTCCAGACAGGAACCTAGGTTAAGGAAGTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453862.1 |
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| CDS TCA 90 bp | TCCTCCTTCCCAGGGCTTATGGTTGTATGGGTGAGAAGGTCAAGTTaGAAAGTATACACTACTCTTGCAGCCTGCCCTTCCATTTATGAC | + |
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Preference number: 5 (lower is better) Translates to: SSFPGLMVVWVRRSS*KVYTTLAACPSIYD Trigger: GTCATAAATGGAAGGGCAGGCTGCAAGAGTAGTGTATACTTTTCAACTTGACCTTCTCACCCATACAACCATAAGCCCTGGGAAGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | TGGAAGTACTGGAATTCAAATGTAGGTTGGTCTGATCTCACAGTTTaGACAGGACTGTCTCCCCACTTCAACCCTAGCTCTTTCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: WKYWNSNVGWSDLTV*TGLSPHFNPSSFSR Trigger: TCTGGAGAAAGAGCTAGGGTTGAAGTGGGGAGACAGTCCTGTGCAAACTGTGAGATCAGACCAACCTACATTTGAATTCCAGTACTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | TCATTTCTGGATTTCTTTCAGAAATGTACAGGGTGTGCTCAGAGATaGCCTCTACACAGCCTCCCTGTCAACAGCCATTTTAGGGACCAA | + |
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Preference number: 5 (lower is better) Translates to: SFLDFFQKCTGCAQR*PLHSLPVNSHFRDQ Trigger: TTGGTCCCTAAAATGGCTGTTGACAGGGAGGCTGTGTAGAGGGCATCTCTGAGCACACCCTGTACATTTCTGAAAGAAATCCAGAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 90 bp | GCTTCATCACCATCAGTTAAGAGCCTAGAACATGAGGCCTCCAAATaGCTGAAAAGGTCAGCATGTAACTGTAAGTCTCCCATCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ASSPSVKSLEHEASK*LKRSACNCKSPISS Trigger: GGAAGAGATGGGAGACTTACAGTTACATGCTGACCTTTTCAGTCATTTGGAGGCCTCATGTTCTAGGCTCTTAACTGATGGTGATGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453862.1 ENST00000657031.1 |
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| CDS CCA 90 bp | TCACCCAAAGTTGTACAGTGGAAGTACTGGAATTCAAATGTAGGTTaGTCTGATCTCACAGTTTGCACAGGACTGTCTCCCCACTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: SPKVVQWKYWNSNVG*SDLTVCTGLSPHFN Trigger: GTTGAAGTGGGGAGACAGTCCTGTGCAAACTGTGAGATCAGACCAACCTACATTTGAATTCCAGTACTTCCACTGTACAACTTTGGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 90 bp | TGTAGCTCCCATAATTCCCATGTGTTATGGGAGATAATTGAATCATaGGGGCAGTTTCCCCAGTCTCTTCTCATGGTAGCGAATAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CSSHNSHVLWEIIES*GQFPQSLLMVANKS Trigger: TGACTTATTCGCTACCATGAGAAGAGACTGGGGAAACTGCCCCCATGATTCAATTATCTCCCATAACACATGGGAATTATGGGAGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 90 bp | AGTGCTTTCTCATGCCTTGTCTCATCTGATCTCTCAGAAGCCTCTTaGGGACCTTTTACTATTCTCACCATGTTACATAGGAGGTATCTG | + |
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Preference number: 5 (lower is better) Translates to: SAFSCLVSSDLSEAS*GPFTILTMLHRRYL Trigger: CAGATACCTCCTATGTAACATGGTGAGAATAGTAAAAGGTCCCCAAGAGGCTTCTGAGAGATCAGATGAGACAAGGCATGAGAAAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 90 bp | GCACTTCAGCAATTTACAAAGTGCTTTCTCATGCCTTGTCTCATCTaGTCTCTCAGAAGCCTCTTGGGGACCTTTTACTATTCTCACCAT | + |
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Preference number: 5 (lower is better) Translates to: ALQQFTKCFLMPCLI*SLRSLLGTFYYSHH Trigger: ATGGTGAGAATAGTAAAAGGTCCCCAAGAGGCTTCTGAGAGATCAGATGAGACAAGGCATGAGAAAGCACTTTGTAAATTGCTGAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | AGCCAAATATATGCCATCTGCCTACAGGGAATACATTTAGAATTATaGCCCTTTTCCCAACCAAGTCTACCTAGATTCCTGCAGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SQIYAICLQGIHLEL*PFSQPSLPRFLQSA Trigger: TGCTGACTGCAGGAATCTAGGTAGACTTGGTTGGGAAAAGGGGCATAATTCTAAATGTATTCCCTGTAGGCAGATGGCATATATTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 90 bp | CCAAATCTCATCTTGAATTGTAGCTCCCATAATTCCCATGTGTTATaGGAGATAATTGAATCATGGGGGCAGTTTCCCCAGTCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PNLILNCSSHNSHVL*EIIESWGQFPQSLL Trigger: GAGAAGAGACTGGGGAAACTGCCCCCATGATTCAATTATCTCCCATAACACATGGGAATTATGGGAGCTACAATTCAAGATGAGATTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 90 bp | TGGCATCATGAATTCAGAAATGACCACATAATAGTCTTTCGCATTTaGAGATCTTCCTCCTTCCCAGGGCTTATGGTTGTATGGGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: WHHEFRNDHIIVFRI*RSSSFPGLMVVWVR Trigger: TCTCACCCATACAACCATAAGCCCTGGGAAGGAGGAAGATCTTCAAATGCGAAAGACTATTATGTGGTCATTTCTGAATTCATGATGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | ATAACATTTCTGTGGCACTTCAGCAATTTACAAAGTGCTTTCTCATaGCTTGTCTCATCTGATCTCTCAGAAGCCTCTTGGGGACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: ITFLWHFSNLQSAFS*LVSSDLSEASWGPF Trigger: AAAAGGTCCCCAAGAGGCTTCTGAGAGATCAGATGAGACAAGGCATGAGAAAGCACTTTGTAAATTGCTGAAGTGCCACAGAAATGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 90 bp | GCCACACCACGCAGGGATATAGACTTATTACTCAAATCAATATCATaGAAAGCTCGTAGGTTAGGGATTTTACAAAGGAAGTTTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: ATPRRDIDLLLKSIS*KARRLGILQRKFGG Trigger: ACCCCCAAACTTCCTTTGTAAAATCCCTAACCTACGAGCTTTCCATGATATTGATTTGAGTAATAAGTCTATATCCCTGCGTGGTGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 90 bp | CATGGAAAAAGGGACTTTGCAGCTGCAGTTAGGAATCTTGAGATCTaGAGATTATCTTGGATTAGCCATATTGAGCTCAATGTACTCACA | + |
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Preference number: 5 (lower is better) Translates to: HGKRDFAAAVRNLEI*RLSWISHIELNVLT Trigger: TGTGAGTACATTGAGCTCAATATGGCTAATCCAAGATAATCTTCAGATCTCAAGATTCCTAACTGCAGCTGCAAAGTCCCTTTTTCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 90 bp | GACACTCTGCTGGACACCAGACATAGAGTGGTGACAAGAAGGGCTTaGAAAATGGATGGTTTAATTTCTATCTATCAGTTTTCGAATACT | + |
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Preference number: 5 (lower is better) Translates to: DTLLDTRHRVVTRRA*KMDGLISIYQFSNT Trigger: AGTATTCGAAAACTGATAGATAGAAATTAAACCATCCATTTTTCAAGCCCTTCTTGTCACCACTCTATGTCTGGTGTCCAGCAGAGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | CTGTCTCCCCACTTCAACCCTAGCTCTTTCTCCAGAGTTCAACTATaGCCACTTAAGTGTAATAGTAGTTCATATATAACACTTCCTATA | + |
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Preference number: 5 (lower is better) Translates to: LSPHFNPSSFSRVQL*PLKCNSSSYITLPI Trigger: TATAGGAAGTGTTATATATGAACTACTATTACACTTAAGTGGGCATAGTTGAACTCTGGAGAAAGAGCTAGGGTTGAAGTGGGGAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 90 bp | TCAACTCAGGTGGTTCCATTTTCTTACATTCAGATCCTCCAAGAGTaGATTGAAAAACCAAATAATGCAATAGTGTTTCAGACACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: STQVVPFSYIQILQE*IEKPNNAIVFQTLC Trigger: GCAGAGTGTCTGAAACACTATTGCATTATTTGGTTTTTCAATCCACTCTTGGAGGATCTGAATGTAAGAAAATGGAACCACCTGAGTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 90 bp | ATCTTGCCAAAAGCCACACCATTTGTAAGTTATAGAACTGGAATTTaGAAGCTGACAGTGCCAGAATCTTTGCTGGCAACTACTATATTA | + |
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Preference number: 5 (lower is better) Translates to: ILPKATPFVSYRTGI*KLTVPESLLATTIL Trigger: TAATATAGTAGTTGCCAGCAAAGATTCTGGCACTGTCAGCTTTCAAATTCCAGTTCTATAACTTACAAATGGTGTGGCTTTTGGCAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 90 bp | GGAACTCACAATGCTGCACTTGATTTCTTGACTTTAATCCAAATGTaGTGGCTTCAATTTAGTGCATTTTGGGAAAAAGATCCAGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GTHNAALDFLTLIQM*WLQFSAFWEKDPVA Trigger: AGCAACTGGATCTTTTTCCCAAAATGCACTAAATTGAAGCCATCACATTTGGATTAAAGTCAAGAAATCAAGTGCAGCATTGTGAGTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | TACATAAATCATTTAGAGTTGAAACCAAGCCAAATATATGCCATCTaGCTACAGGGAATACATTTAGAATTATGCCCCTTTTCCCAACCA | + |
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Preference number: 5 (lower is better) Translates to: YINHLELKPSQIYAI*LQGIHLELCPFSQP Trigger: TGGTTGGGAAAAGGGGCATAATTCTAAATGTATTCCCTGTAGGCAGATGGCATATATTTGGCTTGGTTTCAACTCTAAATGATTTATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 90 bp | TCCTTTACTTACATTGTGACTTCATCCAAACAACCATCACCTTACTaGATGACTGAAATTATTATCATCTTAACAGTGGTAATTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SFTYIVTSSKQPSPY*MTEIIIILTVVILV Trigger: GACCAGAATTACCACTGTTAAGATGATAATAATTTCAGTCATGCAGTAAGGTGATGGTTGTTTGGATGAAGTCACAATGTAAGTAAAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | CAGTTGCTTCTGGGTGGGGGCACAGAAGCCACTGGTTaGTGGATCCAGGTGGAGCCATGGGTATCAGACATG | + |
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Preference number: 6 (lower is better) Translates to: QLLLGGGTEATG*WIQVEPWVSDM Trigger: CATGTCTGATACCCATGGCTCCACCTGGATCCACCAACCAGTGGCTTCTGTGCCCCCACCCAGAAGCAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | TTGCTTCTGGGTGGGGGCACAGAAGCCACTGGTTGGTaGATCCAGGTGGAGCCATGGGTATCAGACATGCAA | + |
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Preference number: 6 (lower is better) Translates to: LLLGGGTEATGW*IQVEPWVSDMQ Trigger: TTGCATGTCTGATACCCATGGCTCCACCTGGATCCACCAACCAGTGGCTTCTGTGCCCCCACCCAGAAGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | GCTGAAGCTGTTCTCTTGCACTCAGTTGCTTCTGGGTaGGGGCACAGAAGCCACTGGTTGGTGGATCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AEAVLLHSVASG*GHRSHWLVDPG Trigger: ACCTGGATCCACCAACCAGTGGCTTCTGTGCCCCCACCCAGAAGCAACTGAGTGCAAGAGAACAGCTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 72 bp | TCAGTTGCTTCTGGGTGGGGGCACAGAAGCCACTGGTaGGTGGATCCAGGTGGAGCCATGGGTATCAGACAT | + |
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Preference number: 6 (lower is better) Translates to: SVASGWGHRSHW*VDPGGAMGIRH Trigger: ATGTCTGATACCCATGGCTCCACCTGGATCCACCAACCAGTGGCTTCTGTGCCCCCACCCAGAAGCAACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 72 bp | TCCTGGGTGGCATCAGAGTCGGGGGTGGTCTTCCCATaGCACTTCCTTAACCTAGGTTCCTGTCTGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: SWVASESGVVFP*HFLNLGSCLDC Trigger: ACAGTCCAGACAGGAACCTAGGTTAAGGAAGTGCAATGGGAAGACCACCCCCGACTCTGATGCCACCCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453862.1 |
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| CDS CAA 90 bp | AAACTCATTTCCTGGGTGGCATCAGAGTCGGGGGTGGTCTTCCCATaGCACTTCCTTAACCTAGGTTCCTGTCTGGACTGTCTTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: KLISWVASESGVVFP*HFLNLGSCLDCLLG Trigger: GCCCAGAAGACAGTCCAGACAGGAACCTAGGTTAAGGAAGTGCAATGGGAAGACCACCCCCGACTCTGATGCCACCCAGGAAATGAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453862.1 |
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| CDS CAA 90 bp | ATTGGTTGGGTTGGAGGTGAAATCATAGGAGCTGAAGCTGTTCTCTaGCACTCAGTTGCTTCTGGGTGGGGGCACAGAAGCCACTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: IGWVGGEIIGAEAVL*HSVASGWGHRSHWL Trigger: CAACCAGTGGCTTCTGTGCCCCCACCCAGAAGCAACTGAGTGCAAGAGAACAGCTTCAGCTCCTATGATTTCACCTCCAACCCAACCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | TTTACAAAGGAAGTTTGGGGGTGGCTAGGCAGTGGGTaGTTGCTGCTGATTGGTTGGGTTGGAGGTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: FTKEVWGWLGSG*LLLIGWVGGEI Trigger: GATTTCACCTCCAACCCAACCAATCAGCAGCAAGCACCCACTGCCTAGCCACCCCCAAACTTCCTTTGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 72 bp | ACAAAGGAAGTTTGGGGGTGGCTAGGCAGTGGGTGCTaGCTGCTGATTGGTTGGGTTGGAGGTGAAATCATA | + |
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Preference number: 6 (lower is better) Translates to: TKEVWGWLGSGC*LLIGWVGGEII Trigger: TATGATTTCACCTCCAACCCAACCAATCAGCAGCAAGCACCCACTGCCTAGCCACCCCCAAACTTCCTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | AGGGATTTTACAAAGGAAGTTTGGGGGTGGCTAGGCAGTGGGTGCTaGCTGCTGATTGGTTGGGTTGGAGGTGAAATCATAGGAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RDFTKEVWGWLGSGC*LLIGWVGGEIIGAE Trigger: TTCAGCTCCTATGATTTCACCTCCAACCCAACCAATCAGCAGCAAGCACCCACTGCCTAGCCACCCCCAAACTTCCTTTGTAAAATCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | TGGGAGGTTATTTCCCTACAATGCTGCCACAATGCTTaGTGTGGCCCTTCGTCATGGAACTCACAATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WEVISLQCCHNA*CGPSSWNSQCC Trigger: GCAGCATTGTGAGTTCCATGACGAAGGGCCACATCAAGCATTGTGGCAGCATTGTAGGGAAATAACCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | GGTGGTTTCCTGGGAGGTTATTTCCCTACAATGCTGCCACAATGCTaGATGTGGCCCTTCGTCATGGAACTCACAATGCTGCACTTGATT | + |
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Preference number: 6 (lower is better) Translates to: GGFLGGYFPTMLPQC*MWPFVMELTMLHLI Trigger: AATCAAGTGCAGCATTGTGAGTTCCATGACGAAGGGCCACATCAAGCATTGTGGCAGCATTGTAGGGAAATAACCTCCCAGGAAACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | TTCCTGGGAGGTTATTTCCCTACAATGCTGCCACAATaGTTGATGTGGCCCTTCGTCATGGAACTCACAATG | + |
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Preference number: 6 (lower is better) Translates to: FLGGYFPTMLPQ*LMWPFVMELTM Trigger: CATTGTGAGTTCCATGACGAAGGGCCACATCAAGCATTGTGGCAGCATTGTAGGGAAATAACCTCCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 72 bp | TTAGTCCATTTCAAGATGAGGGTGAAGAGCTTGTTTTaGTGGTATCCACCAGGATCACGGGCAGTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LVHFKMRVKSLF*WYPPGSRAVEQ Trigger: CTGCTCCACTGCCCGTGATCCTGGTGGATACCACAAAAACAAGCTCTTCACCCTCATCTTGAAATGGACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | CTCTTCCACCTCTTCCAGAGCTCAGTGAAGGCAGAGTTTTCTTCTTaGGTGCTTCCTATTTTGCACAGAAGAGTGTTTAGCACAGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LFHLFQSSVKAEFSS*VLPILHRRVFSTEW Trigger: CCACTCTGTGCTAAACACTCTTCTGTGCAAAATAGGAAGCACCAAAGAAGAAAACTCTGCCTTCACTGAGCTCTGGAAGAGGTGGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | TGGAATTCAAATGTAGGTTGGTCTGATCTCACAGTTTaGACAGGACTGTCTCCCCACTTCAACCCTAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: WNSNVGWSDLTV*TGLSPHFNPSS Trigger: AGAGCTAGGGTTGAAGTGGGGAGACAGTCCTGTGCAAACTGTGAGATCAGACCAACCTACATTTGAATTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | GATTTCTTTCAGAAATGTACAGGGTGTGCTCAGAGATaGCCTCTACACAGCCTCCCTGTCAACAGCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: DFFQKCTGCAQR*PLHSLPVNSHF Trigger: AAAATGGCTGTTGACAGGGAGGCTGTGTAGAGGGCATCTCTGAGCACACCCTGTACATTTCTGAAAGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | CTTGGATTAGCCATATTGAGCTCAATGTACTCACAATaGACCTGTCTGTTGCCTTCTGCCACTGGGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: LGLAILSSMYSQ*TCLLPSATGNP Trigger: AGGATTCCCAGTGGCAGAAGGCAACAGACAGGTCCATTGTGAGTACATTGAGCTCAATATGGCTAATCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | CCATCAGTTAAGAGCCTAGAACATGAGGCCTCCAAATaGCTGAAAAGGTCAGCATGTAACTGTAAGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PSVKSLEHEASK*LKRSACNCKSP Trigger: GGGAGACTTACAGTTACATGCTGACCTTTTCAGTCATTTGGAGGCCTCATGTTCTAGGCTCTTAACTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453862.1 ENST00000657031.1 |
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| CDS TCA 72 bp | ACAGTGGAAGTACTGGAATTCAAATGTAGGTTGGTCTaGTCTCACAGTTTGCACAGGACTGTCTCCCCACTT | + |
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Preference number: 6 (lower is better) Translates to: TVEVLEFKCRLV*SHSLHRTVSPL Trigger: AAGTGGGGAGACAGTCCTGTGCAAACTGTGAGATCAGACCAACCTACATTTGAATTCCAGTACTTCCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | CATAATTCCCATGTGTTATGGGAGATAATTGAATCATaGGGGCAGTTTCCCCAGTCTCTTCTCATGGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: HNSHVLWEIIES*GQFPQSLLMVA Trigger: CGCTACCATGAGAAGAGACTGGGGAAACTGCCCCCATGATTCAATTATCTCCCATAACACATGGGAATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | GTTGTACAGTGGAAGTACTGGAATTCAAATGTAGGTTaGTCTGATCTCACAGTTTGCACAGGACTGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VVQWKYWNSNVG*SDLTVCTGLSP Trigger: GGGAGACAGTCCTGTGCAAACTGTGAGATCAGACCAACCTACATTTGAATTCCAGTACTTCCACTGTACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | ACTATAAACATGTCTCCCAAAGCTATCTTGGCAGATTaGAGGCTAAAGACAAGAGGGAGAGGAGCTGGATCA | + |
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Preference number: 6 (lower is better) Translates to: TINMSPKAILAD*RLKTRGRGAGS Trigger: TGATCCAGCTCCTCTCCCTCTTGTCTTTAGCCTTCAATCTGCCAAGATAGCTTTGGGAGACATGTTTATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | TCATGCCTTGTCTCATCTGATCTCTCAGAAGCCTCTTaGGGACCTTTTACTATTCTCACCATGTTACATAGG | + |
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Preference number: 6 (lower is better) Translates to: SCLVSSDLSEAS*GPFTILTMLHR Trigger: CCTATGTAACATGGTGAGAATAGTAAAAGGTCCCCAAGAGGCTTCTGAGAGATCAGATGAGACAAGGCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 72 bp | TTTTCATTAGTCCATTTCAAGATGAGGGTGAAGAGCTaGTTTTTGTGGTATCCACCAGGATCACGGGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: FSLVHFKMRVKS*FLWYPPGSRAV Trigger: CACTGCCCGTGATCCTGGTGGATACCACAAAAACAAGCTCTTCACCCTCATCTTGAAATGGACTAATGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | CATTTCTGTGGCACTTCAGCAATTTACAAAGTGCTTTCTCATGCCTaGTCTCATCTGATCTCTCAGAAGCCTCTTGGGGACCTTTTACTA | + |
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Preference number: 6 (lower is better) Translates to: HFCGTSAIYKVLSHA*SHLISQKPLGDLLL Trigger: TAGTAAAAGGTCCCCAAGAGGCTTCTGAGAGATCAGATGAGACAAGGCATGAGAAAGCACTTTGTAAATTGCTGAAGTGCCACAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | ACAGAAGAGTGTTTAGCACAGAGTGGAGGCTTGGAATaGGAATCAGGTTTTTCCAGAATGCCTTTACATTCC | + |
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Preference number: 6 (lower is better) Translates to: TEECLAQSGGLE*ESGFSRMPLHS Trigger: GGAATGTAAAGGCATTCTGGAAAAACCTGATTCTCATTCCAAGCCTCCACTCTGTGCTAAACACTCTTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | GCTATCTGTGACAAGTCTTGTCGCACTGTAGCAAGATaGATTCTTGGGTCTTCATCTAATCCTAGAAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: AICDKSCRTVAR*ILGSSSNPRRD Trigger: GTCTCTTCTAGGATTAGATGAAGACCCAAGAATTCATCTTGCTACAGTGCGACAAGACTTGTCACAGATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | CATGAGATTGATGGTTTAATAAGGGGAAACTCTTTTTaGTCGGCTCTCATTCTCTCTTTGCCTGCTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: HEIDGLIRGNSF*SALILSLPAAM Trigger: CATAGCAGCAGGCAAAGAGAGAATGAGAGCCGAGCAAAAAGAGTTTCCCCTTATTAAACCATCAATCTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | TATGCCATCTGCCTACAGGGAATACATTTAGAATTATaGCCCTTTTCCCAACCAAGTCTACCTAGATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: YAICLQGIHLEL*PFSQPSLPRFL Trigger: CAGGAATCTAGGTAGACTTGGTTGGGAAAAGGGGCATAATTCTAAATGTATTCCCTGTAGGCAGATGGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | CATACTTGTAACTGCCCAATTAGTTTCCCTGCCAGTTaGACAAACAAAGATGACAGCATTGCTGTAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HTCNCPISFPAS*TNKDDSIAVER Trigger: TCTCTCTACAGCAATGCTGTCATCTTTGTTTGTGCAACTGGCAGGGAAACTAATTGGGCAGTTACAAGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | CAGTTAGGAATCTTGAGATCTGAAGATTATCTTGGATTAGCCATATaGAGCTCAATGTACTCACAATGGACCTGTCTGTTGCCTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: QLGILRSEDYLGLAI*SSMYSQWTCLLPSA Trigger: GGCAGAAGGCAACAGACAGGTCCATTGTGAGTACATTGAGCTCAATATGGCTAATCCAAGATAATCTTCAGATCTCAAGATTCCTAACTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | ACAGCCTCCCTGTCAACAGCCATTTTAGGGACCAATAACTTCTTATaGATGTATCCAAGTCAGATTGCTGAATACTCCATAATCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: TASLSTAILGTNNFL*MYPSQIAEYSIIWG Trigger: ACCCCAGATTATGGAGTATTCAGCAATCTGACTTGGATACATCAATAAGAAGTTATTGGTCCCTAAAATGGCTGTTGACAGGGAGGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | AGTATACACTACTCTTGCAGCCTGCCCTTCCATTTATaGCTGTGCCAATCTTTCCAAACCTTGTCTAATATG | + |
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Preference number: 6 (lower is better) Translates to: SIHYSCSLPFHL*LCQSFQTLSNM Trigger: CATATTAGACAAGGTTTGGAAAGATTGGCACAGTCATAAATGGAAGGGCAGGCTGCAAGAGTAGTGTATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | CAATTTACAAAGTGCTTTCTCATGCCTTGTCTCATCTaGTCTCTCAGAAGCCTCTTGGGGACCTTTTACTAT | + |
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Preference number: 6 (lower is better) Translates to: QFTKCFLMPCLI*SLRSLLGTFYY Trigger: ATAGTAAAAGGTCCCCAAGAGGCTTCTGAGAGATCAGATGAGACAAGGCATGAGAAAGCACTTTGTAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | CCATCATTTTATTTAACTGATGATGAGGTGGTTTCCTaGGAGGTTATTTCCCTACAATGCTGCCACAATGCT | + |
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Preference number: 6 (lower is better) Translates to: PSFYLTDDEVVS*EVISLQCCHNA Trigger: AGCATTGTGGCAGCATTGTAGGGAAATAACCTCCCAGGAAACCACCTCATCATCAGTTAAATAAAATGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | TTCCTGGAACCTGAGAATATGTTACCTTACATGGAAAAAGGGACTTaGCAGCTGCAGTTAGGAATCTTGAGATCTGAAGATTATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: FLEPENMLPYMEKGT*QLQLGILRSEDYLG Trigger: TCCAAGATAATCTTCAGATCTCAAGATTCCTAACTGCAGCTGCAAAGTCCCTTTTTCCATGTAAGGTAACATATTCTCAGGTTCCAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | TATCATTTAAACTATAAACATGTCTCCCAAAGCTATCTTGGCAGATaGAAGGCTAAAGACAAGAGGGAGAGGAGCTGGATCAAATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: YHLNYKHVSQSYLGR*KAKDKRERSWIKSP Trigger: AGGAGATTTGATCCAGCTCCTCTCCCTCTTGTCTTTAGCCTTCAATCTGCCAAGATAGCTTTGGGAGACATGTTTATAGTTTAAATGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | AGGGACTTTGCAGCTGCAGTTAGGAATCTTGAGATCTaGAGATTATCTTGGATTAGCCATATTGAGCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: RDFAAAVRNLEI*RLSWISHIELN Trigger: ATTGAGCTCAATATGGCTAATCCAAGATAATCTTCAGATCTCAAGATTCCTAACTGCAGCTGCAAAGTCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | GAATTCAGAAATGACCACATAATAGTCTTTCGCATTTaGAGATCTTCCTCCTTCCCAGGGCTTATGGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: EFRNDHIIVFRI*RSSSFPGLMVV Trigger: TACAACCATAAGCCCTGGGAAGGAGGAAGATCTTCAAATGCGAAAGACTATTATGTGGTCATTTCTGAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | GTAAGTAACTCACCCAAAGTTGTACAGTGGAAGTACTaGAATTCAAATGTAGGTTGGTCTGATCTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: VSNSPKVVQWKY*NSNVGWSDLTV Trigger: AACTGTGAGATCAGACCAACCTACATTTGAATTCCAGTACTTCCACTGTACAACTTTGGGTGAGTTACTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 90 bp | TTACCTTACATGGAAAAAGGGACTTTGCAGCTGCAGTTAGGAATCTaGAGATCTGAAGATTATCTTGGATTAGCCATATTGAGCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LPYMEKGTLQLQLGI*RSEDYLGLAILSSM Trigger: CATTGAGCTCAATATGGCTAATCCAAGATAATCTTCAGATCTCAAGATTCCTAACTGCAGCTGCAAAGTCCCTTTTTCCATGTAAGGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS TCA 72 bp | CTTTTACTATTCTCACCATGTTACATAGGAGGTATCTaGAATTTAGACAGGTTACAGAAGGTGTCCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: LLLFSPCYIGGI*NLDRLQKVSQI Trigger: GATTTGGGACACCTTCTGTAACCTGTCTAAATTTCAGATACCTCCTATGTAACATGGTGAGAATAGTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | CATTTAGAGTTGAAACCAAGCCAAATATATGCCATCTaGCTACAGGGAATACATTTAGAATTATGCCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: HLELKPSQIYAI*LQGIHLELCPF Trigger: AAAGGGGCATAATTCTAAATGTATTCCCTGTAGGCAGATGGCATATATTTGGCTTGGTTTCAACTCTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CCA 72 bp | CGCAGGGATATAGACTTATTACTCAAATCAATATCATaGAAAGCTCGTAGGTTAGGGATTTTACAAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RRDIDLLLKSIS*KARRLGILQRK Trigger: CTTCCTTTGTAAAATCCCTAACCTACGAGCTTTCCATGATATTGATTTGAGTAATAAGTCTATATCCCTGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS CAA 72 bp | CTGTCAACAGCCATTTTAGGGACCAATAACTTCTTATaGATGTATCCAAGTCAGATTGCTGAATACTCCATA | + |
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Preference number: 6 (lower is better) Translates to: LSTAILGTNNFL*MYPSQIAEYSI Trigger: TATGGAGTATTCAGCAATCTGACTTGGATACATCAATAAGAAGTTATTGGTCCCTAAAATGGCTGTTGACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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| CDS GCA 72 bp | TACATTGTGACTTCATCCAAACAACCATCACCTTACTaGATGACTGAAATTATTATCATCTTAACAGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: YIVTSSKQPSPY*MTEIIIILTVV Trigger: TACCACTGTTAAGATGATAATAATTTCAGTCATGCAGTAAGGTGATGGTTGTTTGGATGAAGTCACAATGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657031.1 |
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