Pregenerated sensors for LINC00454 (Homo sapiens)
Ensembl gene IDs: ENSG00000226921Ensembl transcript IDs: ENST00000425483.2, ENST00000430978.7, ENST00000442500.7, ENST00000608044.5, ENST00000609493.5, ENST00000609861.6, ENST00000610194.1, ENST00000661456.1, ENST00000671045.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTACCTTCGCAGGAAGTGGCCTCACTAGAGTAGAGGTGATGGGGTaGGAGCCGAGCCTCAACACGGGGGCCCTGGTGCGCATCCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: ATFAGSGLTRVEVMG*EPSLNTGALVRIPL Trigger: TAGAGGGATGCGCACCAGGGCCCCCGTGTTGAGGCTCGGCTCCCACCCCATCACCTCTACTCTAGTGAGGCCACTTCCTGCGAAGGTAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS TCA 90 bp | GCAGGGTTGAGATGTGAGTCCGGTGTCTTGGACCTCAGACTCCTATaGTGCTGCGAGGCCGCTGGTGGCTGGACTGTGGGGACCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: AGLRCESGVLDLRLL*CCEAAGGWTVGTHS Trigger: GCTGTGGGTCCCCACAGTCCAGCCACCAGCGGCCTCGCAGCATCATAGGAGTCTGAGGTCCAAGACACCGGACTCACATCTCAACCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS GCA 90 bp | GGCCTCACCTATGGTGCCAGCTCAGCCATGTGGGTGTCTCCAGGATaGCATCGCCAGGGAGTTCACATGAGGTCAGCCTGCCAGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GLTYGASSAMWVSPG*HRQGVHMRSACQLG Trigger: CCCCAACTGGCAGGCTGACCTCATGTGAACTCCCTGGCGATGGCATCCTGGAGACACCCACATGGCTGAGCTGGCACCATAGGTGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000661456.1 |
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| CDS CCA 90 bp | CCAGTGGCACAGGGAGTCCTTGGTCGCCAGGGCTGTCATCATTTCTaGAGGAGCCGTGTTGCACCTGGGGCCACTGAGACCCAGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PVAQGVLGRQGCHHF*RSRVAPGATETQKV Trigger: CACCTTCTGGGTCTCAGTGGCCCCAGGTGCAACACGGCTCCTCCAGAAATGATGACAGCCCTGGCGACCAAGGACTCCCTGTGCCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000609861.6 ENST00000661456.1 ENST00000671045.1 |
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| CDS TCA 90 bp | CAGCCATGTGGGTGTCTCCAGGATGCCATCGCCAGGGAGTTCACATaGGGTCAGCCTGCCAGTTGGGGCTGCGAAAGTCGGGCTCACATC | + |
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Preference number: 5 (lower is better) Translates to: QPCGCLQDAIAREFT*GQPASWGCESRAHI Trigger: GATGTGAGCCCGACTTTCGCAGCCCCAACTGGCAGGCTGACCTCATGTGAACTCCCTGGCGATGGCATCCTGGAGACACCCACATGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 |
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| CDS TCA 90 bp | ATTCACTCAACAGCCCCATGTTGTGCCTCCCTTGCTGGCCATGTCTaGGGCAAGCAACCACGGTCCCCATGGCCCTGGTGCCCTCACCCT | + |
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Preference number: 5 (lower is better) Translates to: IHSTAPCCASLAGHV*GKQPRSPWPWCPHP Trigger: AGGGTGAGGGCACCAGGGCCATGGGGACCGTGGTTGCTTGCCTCAGACATGGCCAGCAAGGGAGGCACAACATGGGGCTGTTGAGTGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS GCA 90 bp | GTGTCTCCAGGATGCCATCGCCAGGGAGTTCACATGAGGTCAGCCTaGCAGTTGGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: VSPGCHRQGVHMRSA*QLGLRKSGSHPGQS Trigger: GCTTTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCCAACTGGCAGGCTGACCTCATGTGAACTCCCTGGCGATGGCATCCTGGAGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 |
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| CDS GCA 90 bp | GGGGACCCACAGCCTCTCACACATTCACTCAACAGCCCCATGTTGTaGCTCCCTTGCTGGCCATGTCTGAGGCAAGCAACCACGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: GDPQPLTHSLNSPML*LPCWPCLRQATTVP Trigger: GGGGACCGTGGTTGCTTGCCTCAGACATGGCCAGCAAGGGAGGCACAACATGGGGCTGTTGAGTGAATGTGTGAGAGGCTGTGGGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS GCA 90 bp | ATGAGTGCCTATGGTGCCAGCTCAGCCATGTGGGTGTCTCCAGGATaGCATCGCCAGGGAGTTCACATGAGGTCAGCCTGCCAGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: MSAYGASSAMWVSPG*HRQGVHMRSACQLG Trigger: CCCCAACTGGCAGGCTGACCTCATGTGAACTCCCTGGCGATGGCATCCTGGAGACACCCACATGGCTGAGCTGGCACCATAGGCACTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 |
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| CDS CCA 90 bp | CCTCTCACACATTCACTCAACAGCCCCATGTTGTGCCTCCCTTGCTaGCCATGTCTGAGGCAAGCAACCACGGTCCCCATGGCCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PLTHSLNSPMLCLPC*PCLRQATTVPMALV Trigger: CACCAGGGCCATGGGGACCGTGGTTGCTTGCCTCAGACATGGCCAGCAAGGGAGGCACAACATGGGGCTGTTGAGTGAATGTGTGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS TCA 90 bp | GGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTTaGTGCTTCCTGTGTCTGTGTCTCAACACTCCCACGTCCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GAAKVGLTSWPKPQS*CFLCLCLNTPTSLS Trigger: GCTGAGGGACGTGGGAGTGTTGAGACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 |
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| CDS TCA 90 bp | GGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTTaGTGCTTCCTGTGTCTGTGTAGGTCCTACGTGCGTGCTCACGTC | + |
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Preference number: 5 (lower is better) Translates to: GAAKVGLTSWPKPQS*CFLCLCRSYVRAHV Trigger: GACGTGAGCACGCACGTAGGACCTACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000609861.6 ENST00000661456.1 |
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| CDS CCA 90 bp | ACCTTCGCAGGAAGTGGCCTCACCTATGGTGCCAGCTCAGCCATGTaGGTGTCTCCAGGATGCCATCGCCAGGGAGTTCACATGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TFAGSGLTYGASSAM*VSPGCHRQGVHMRS Trigger: TGACCTCATGTGAACTCCCTGGCGATGGCATCCTGGAGACACCCACATGGCTGAGCTGGCACCATAGGTGAGGCCACTTCCTGCGAAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000661456.1 |
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| CDS CCA 90 bp | CTGCTTGCTCCAAAGCTGCCACCTCAGCTGTATATCTCCCCAGGGTaGCGGGGCTGGAAGTGCATTCATCTCCTGGATGCTCTGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLAPKLPPQLYISPG*RGWKCIHLLDALWS Trigger: GGACCACAGAGCATCCAGGAGATGAATGCACTTCCAGCCCCGCCACCCTGGGGAGATATACAGCTGAGGTGGCAGCTTTGGAGCAAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000661456.1 ENST00000671045.1 |
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| CDS CCA 90 bp | ACCTCAGACTCCTATGATGCTGCGAGGCCGCTGGTGGCTGGACTGTaGGGACCCACAGCCTCTCACACATTCACTCAACAGCCCCATGTT | + |
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Preference number: 5 (lower is better) Translates to: TSDSYDAARPLVAGL*GPTASHTFTQQPHV Trigger: AACATGGGGCTGTTGAGTGAATGTGTGAGAGGCTGTGGGTCCCCACAGTCCAGCCACCAGCGGCCTCGCAGCATCATAGGAGTCTGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS CCA 90 bp | TCTCCACTCCTTTCTTCTAATGGTGGGTGCCTCAGATCTGTCCTGTaGGAGAAAGGACTTCGCGGAGCTCTGTGGGGGCTGCAGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SPLLSSNGGCLRSVL*EKGLRGALWGLQLR Trigger: CCTCAGCTGCAGCCCCCACAGAGCTCCGCGAAGTCCTTTCTCCCACAGGACAGATCTGAGGCACCCACCATTAGAAGAAAGGAGTGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 ENST00000671045.1 |
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| CDS TCA 90 bp | GGGCATCCTGGGGAAGCTCAGGGTTCCTGGGGCCTCTGTGCACACTaGGCCTTCCTCTCGAAGTCTTTGAAGTGCACTGTGTGCTTCATT | + |
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Preference number: 5 (lower is better) Translates to: GHPGEAQGSWGLCAH*AFLSKSLKCTVCFI Trigger: AATGAAGCACACAGTGCACTTCAAAGACTTCGAGAGGAAGGCTCAGTGTGCACAGAGGCCCCAGGAACCCTGAGCTTCCCCAGGATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610194.1 |
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| CDS TCA 90 bp | GCTCTGGCTGGAATGACCAGGGCTACAGCGTGCATGAAAAACAGATaGCCGTGTTCTGTGGCAGCTGCTGCATGTGGGGGCCTCTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: ALAGMTRATACMKNR*PCSVAAAACGGLFV Trigger: GACAAAGAGGCCCCCACATGCAGCAGCTGCCACAGAACACGGTCATCTGTTTTTCATGCACGCTGTAGCCCTGGTCATTCCAGCCAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS TCA 90 bp | GGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTTaGTGCTTCCTGTGTCTGTGTTGCATTCGAGGCGTTTCAACCCAT | + |
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Preference number: 5 (lower is better) Translates to: GAAKVGLTSWPKPQS*CFLCLCCIRGVSTH Trigger: ATGGGTTGAAACGCCTCGAATGCAACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609493.5 |
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| CDS TCA 90 bp | TGTCACAGCAGCTTAGACTTGGCCCTGAGCAGCACAGGGCAGGGTTaGGATGTGAGTCCGGTGTCTTGGACCTCAGACTCCTATGATGCT | + |
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Preference number: 5 (lower is better) Translates to: CHSSLDLALSSTGQG*DVSPVSWTSDSYDA Trigger: AGCATCATAGGAGTCTGAGGTCCAAGACACCGGACTCACATCTCAACCCTGCCCTGTGCTGCTCAGGGCCAAGTCTAAGCTGCTGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS CCA 90 bp | GTGTCTGTGTCTGTCTTTCCTTGTGATGGGGGAGAGACTAGTGTTTaGAGTTTGAGTGGGTTAGATGGCCCCCGAGGGCTCAGGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: VSVSVFPCDGGETSV*SLSGLDGPRGLRMG Trigger: GCCCATCCTGAGCCCTCGGGGGCCATCTAACCCACTCAAACTCCAAACACTAGTCTCTCCCCCATCACAAGGAAAGACAGACACAGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000610194.1 |
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| CDS CCA 90 bp | CCCAGAACGTGCCCTGGAAGAGCAACAAAACCTGGAGGCTCTGGCTaGAATGACCAGGGCTACAGCGTGCATGAAAAACAGATGACCGTG | + |
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Preference number: 5 (lower is better) Translates to: PRTCPGRATKPGGSG*NDQGYSVHEKQMTV Trigger: CACGGTCATCTGTTTTTCATGCACGCTGTAGCCCTGGTCATTCCAGCCAGAGCCTCCAGGTTTTGTTGCTCTTCCAGGGCACGTTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS GCA 90 bp | TCAGGGTGGGGCTCTACTTTCCTCCCTCCTAGCCTGGTAGGAAAGTaGGTCCATGCGATTGGTGAATCAGAATGGGCCTTCTTCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: SGWGSTFLPPSLVGK*VHAIGESEWAFFLH Trigger: ATGCAGGAAGAAGGCCCATTCTGATTCACCAATCGCATGGACGCACTTTCCTACCAGGCTAGGAGGGAGGAAAGTAGAGCCCCACCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000609861.6 ENST00000661456.1 ENST00000671045.1 |
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| CDS GCA 90 bp | CAGGGACATGTCTGTTCTAAGAGTGACTGTGTGAGAGCCCAGCCATaGCTGAAAATGGCAACAAGGTCGCCACACACTCCCTCCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: QGHVCSKSDCVRAQP*LKMATRSPHTPSTF Trigger: GAAGGTGGAGGGAGTGTGTGGCGACCTTGTTGCCATTTTCAGGCATGGCTGGGCTCTCACACAGTCACTCTTAGAACAGACATGTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608044.5 |
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| CDS CCA 90 bp | ATTGAATATACTTCTGAGCGCAAACCCAGTGGCACAGGGAGTCCTTaGTCGCCAGGGCTGTCATCATTTCTGGAGGAGCCGTGTTGCACC | + |
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Preference number: 5 (lower is better) Translates to: IEYTSERKPSGTGSP*SPGLSSFLEEPCCT Trigger: GGTGCAACACGGCTCCTCCAGAAATGATGACAGCCCTGGCGACCAAGGACTCCCTGTGCCACTGGGTTTGCGCTCAGAAGTATATTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000609861.6 ENST00000661456.1 ENST00000671045.1 |
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| CDS TCA 90 bp | TCAGTCGGATCTGCCTTTCTTGCTGACTCAAGAAACAGTAAAAGGTaGCAGGAAGGTGGCCCCGGAACAAATGGAGTCCCGCAGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SVGSAFLADSRNSKR*QEGGPGTNGVPQWL Trigger: GAGCCACTGCGGGACTCCATTTGTTCCGGGGCCACCTTCCTGTCACCTTTTACTGTTTCTTGAGTCAGCAAGAAAGGCAGATCCGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 ENST00000671045.1 |
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| CDS TCA 90 bp | GGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTTaGTGCTTCCTGTGTCTGTGTCCTAAAGGTTTTGCCACTTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: GAAKVGLTSWPKPQS*CFLCLCPKGFATCL Trigger: CAAACAAGTGGCAAAACCTTTAGGACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608044.5 |
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| CDS TCA 90 bp | AGTTTCACATGCAGCTCCATTCATCATAGCAAGTGGTTTCCCTGCTaGACAAGGCAGGCAGGTCTGACAAACACAGTGGCTGCCAGATTC | + |
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Preference number: 5 (lower is better) Translates to: SFTCSSIHHSKWFPC*TRQAGLTNTVAARF Trigger: GAATCTGGCAGCCACTGTGTTTGTCAGACCTGCCTGCCTTGTTCAGCAGGGAAACCACTTGCTATGATGAATGGAGCTGCATGTGAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608044.5 |
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| CDS CCA 90 bp | CCTAGCCTGGTAGGAAAGTGCGTCCATGCGATTGGTGAATCAGAATaGGCCTTCTTCCTGCATATCATTTCTCCACTCCTTTCTTCTAAT | + |
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Preference number: 5 (lower is better) Translates to: PSLVGKCVHAIGESE*AFFLHIISPLLSSN Trigger: ATTAGAAGAAAGGAGTGGAGAAATGATATGCAGGAAGAAGGCCCATTCTGATTCACCAATCGCATGGACGCACTTTCCTACCAGGCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 ENST00000671045.1 |
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| CDS CCA 72 bp | GCAGGAAGTGGCCTCACTAGAGTAGAGGTGATGGGGTaGGAGCCGAGCCTCAACACGGGGGCCCTGGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: AGSGLTRVEVMG*EPSLNTGALVR Trigger: GCGCACCAGGGCCCCCGTGTTGAGGCTCGGCTCCCACCCCATCACCTCTACTCTAGTGAGGCCACTTCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS GCA 72 bp | AGGGTGGCGGGGCTGGAAGTGCATTCATCTCCTGGATaGTCTGTGGTCCGGGGGCAGCTCCAGGCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RVAGLEVHSSPG*SVVRGQLQAGA Trigger: TGCTCCTGCCTGGAGCTGCCCCCGGACCACAGAGCATCCAGGAGATGAATGCACTTCCAGCCCCGCCACCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000661456.1 ENST00000671045.1 |
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| CDS TCA 72 bp | ACAGCCCCATGTTGTGCCTCCCTTGCTGGCCATGTCTaGGGCAAGCAACCACGGTCCCCATGGCCCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: TAPCCASLAGHV*GKQPRSPWPWC Trigger: GCACCAGGGCCATGGGGACCGTGGTTGCTTGCCTCAGACATGGCCAGCAAGGGAGGCACAACATGGGGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS TCA 72 bp | GGGTGTCTCCAGGATGCCATCGCCAGGGAGTTCACATaGGGTCAGCCTGCCAGTTGGGGCTGCGAAAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: GCLQDAIAREFT*GQPASWGCESR Trigger: CCGACTTTCGCAGCCCCAACTGGCAGGCTGACCTCATGTGAACTCCCTGGCGATGGCATCCTGGAGACACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 |
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| CDS CCA 72 bp | CAGGGAGTCCTTGGTCGCCAGGGCTGTCATCATTTCTaGAGGAGCCGTGTTGCACCTGGGGCCACTGAGACC | + |
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Preference number: 6 (lower is better) Translates to: QGVLGRQGCHHF*RSRVAPGATET Trigger: GGTCTCAGTGGCCCCAGGTGCAACACGGCTCCTCCAGAAATGATGACAGCCCTGGCGACCAAGGACTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000609861.6 ENST00000661456.1 ENST00000671045.1 |
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| CDS CCA 72 bp | TGCAGATGTTCTAATGGTCTCATCCTTGGCCGATGGTaGCCCGCGTGCGCTGCCTCAGCGTCCCCATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CRCSNGLILGRW*PACAASASPCP Trigger: GGGACATGGGGACGCTGAGGCAGCGCACGCGGGCCACCATCGGCCAAGGATGAGACCATTAGAACATCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609493.5 |
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| CDS CAA 90 bp | CCAGGATGCCATCGCCAGGGAGTTCACATGAGGTCAGCCTGCCAGTaGGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PGCHRQGVHMRSACQ*GLRKSGSHPGQSLR Trigger: TCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCCAACTGGCAGGCTGACCTCATGTGAACTCCCTGGCGATGGCATCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 |
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| CDS GCA 72 bp | GGATGCCATCGCCAGGGAGTTCACATGAGGTCAGCCTaGCAGTTGGGGCTGCGAAAGTCGGGCTCACATCCT | + |
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Preference number: 6 (lower is better) Translates to: GCHRQGVHMRSA*QLGLRKSGSHP Trigger: AGGATGTGAGCCCGACTTTCGCAGCCCCAACTGGCAGGCTGACCTCATGTGAACTCCCTGGCGATGGCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 |
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| CDS CCA 72 bp | GGAAGTGGCCTCACCTATGGTGCCAGCTCAGCCATGTaGGTGTCTCCAGGATGCCATCGCCAGGGAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GSGLTYGASSAM*VSPGCHRQGVH Trigger: GTGAACTCCCTGGCGATGGCATCCTGGAGACACCCACATGGCTGAGCTGGCACCATAGGTGAGGCCACTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000661456.1 |
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| CDS CAA 72 bp | CATCGCCAGGGAGTTCACATGAGGTCAGCCTGCCAGTaGGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: HRQGVHMRSACQ*GLRKSGSHPGQ Trigger: TTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCCAACTGGCAGGCTGACCTCATGTGAACTCCCTGGCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 |
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| CDS GCA 72 bp | TATGGTGCCAGCTCAGCCATGTGGGTGTCTCCAGGATaGCATCGCCAGGGAGTTCACATGAGGTCAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: YGASSAMWVSPG*HRQGVHMRSAC Trigger: GCAGGCTGACCTCATGTGAACTCCCTGGCGATGGCATCCTGGAGACACCCACATGGCTGAGCTGGCACCATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 |
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| CDS CCA 72 bp | CCACCTCAGCTGTATATCTCCCCAGGGTGGCGGGGCTaGAAGTGCATTCATCTCCTGGATGCTCTGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PPQLYISPGWRG*KCIHLLDALWS Trigger: GGACCACAGAGCATCCAGGAGATGAATGCACTTCCAGCCCCGCCACCCTGGGGAGATATACAGCTGAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000661456.1 ENST00000671045.1 |
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| CDS CCA 72 bp | CATTGCAGATGTTCTAATGGTCTCATCCTTGGCCGATaGTGGCCCGCGTGCGCTGCCTCAGCGTCCCCATGT | + |
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Preference number: 6 (lower is better) Translates to: HCRCSNGLILGR*WPACAASASPC Trigger: ACATGGGGACGCTGAGGCAGCGCACGCGGGCCACCATCGGCCAAGGATGAGACCATTAGAACATCTGCAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609493.5 |
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| CDS CCA 72 bp | TCCTATGATGCTGCGAGGCCGCTGGTGGCTGGACTGTaGGGACCCACAGCCTCTCACACATTCACTCAACAG | + |
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Preference number: 6 (lower is better) Translates to: SYDAARPLVAGL*GPTASHTFTQQ Trigger: CTGTTGAGTGAATGTGTGAGAGGCTGTGGGTCCCCACAGTCCAGCCACCAGCGGCCTCGCAGCATCATAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS CAA 90 bp | TTCGAGGCGTTTCAACCCATTGCAGATGTTCTAATGGTCTCATCCTaGGCCGATGGTGGCCCGCGTGCGCTGCCTCAGCGTCCCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: FEAFQPIADVLMVSS*ADGGPRALPQRPHV Trigger: GACATGGGGACGCTGAGGCAGCGCACGCGGGCCACCATCGGCCAAGGATGAGACCATTAGAACATCTGCAATGGGTTGAAACGCCTCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609493.5 |
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| CDS CAA 90 bp | ACAGCCTCTCACACATTCACTCAACAGCCCCATGTTGTGCCTCCCTaGCTGGCCATGTCTGAGGCAAGCAACCACGGTCCCCATGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TASHTFTQQPHVVPP*LAMSEASNHGPHGP Trigger: AGGGCCATGGGGACCGTGGTTGCTTGCCTCAGACATGGCCAGCAAGGGAGGCACAACATGGGGCTGTTGAGTGAATGTGTGAGAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS CAA 90 bp | TGTGGGGACCCACAGCCTCTCACACATTCACTCAACAGCCCCATGTaGTGCCTCCCTTGCTGGCCATGTCTGAGGCAAGCAACCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: CGDPQPLTHSLNSPM*CLPCWPCLRQATTV Trigger: GACCGTGGTTGCTTGCCTCAGACATGGCCAGCAAGGGAGGCACAACATGGGGCTGTTGAGTGAATGTGTGAGAGGCTGTGGGTCCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS CAA 90 bp | TGGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTaGATGCTTCCTGTGTCTGTGTCTCAACACTCCCACGTCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: WGCESRAHILAKASE*MLPVSVSQHSHVPQ Trigger: CTGAGGGACGTGGGAGTGTTGAGACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 |
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| CDS TCA 72 bp | AGCTTAGACTTGGCCCTGAGCAGCACAGGGCAGGGTTaGGATGTGAGTCCGGTGTCTTGGACCTCAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: SLDLALSSTGQG*DVSPVSWTSDS Trigger: GGAGTCTGAGGTCCAAGACACCGGACTCACATCTCAACCCTGCCCTGTGCTGCTCAGGGCCAAGTCTAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS CCA 72 bp | CCAAAGCTGCCACCTCAGCTGTATATCTCCCCAGGGTaGCGGGGCTGGAAGTGCATTCATCTCCTGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: PKLPPQLYISPG*RGWKCIHLLDA Trigger: AGCATCCAGGAGATGAATGCACTTCCAGCCCCGCCACCCTGGGGAGATATACAGCTGAGGTGGCAGCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000661456.1 ENST00000671045.1 |
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| CDS CCA 72 bp | CAGTCCAGCCTCCATCACACAGCCCAGAACGTGCCCTaGAAGAGCAACAAAACCTGGAGGCTCTGGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: QSSLHHTAQNVP*KSNKTWRLWLE Trigger: TTCCAGCCAGAGCCTCCAGGTTTTGTTGCTCTTCCAGGGCACGTTCTGGGCTGTGTGATGGAGGCTGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS CAA 72 bp | CACACATTCACTCAACAGCCCCATGTTGTGCCTCCCTaGCTGGCCATGTCTGAGGCAAGCAACCACGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: HTFTQQPHVVPP*LAMSEASNHGP Trigger: GGGACCGTGGTTGCTTGCCTCAGACATGGCCAGCAAGGGAGGCACAACATGGGGCTGTTGAGTGAATGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS TCA 72 bp | GGAATGACCAGGGCTACAGCGTGCATGAAAAACAGATaGCCGTGTTCTGTGGCAGCTGCTGCATGTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: GMTRATACMKNR*PCSVAAAACGG Trigger: GCCCCCACATGCAGCAGCTGCCACAGAACACGGTCATCTGTTTTTCATGCACGCTGTAGCCCTGGTCATTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS CCA 72 bp | CTTTCTTCTAATGGTGGGTGCCTCAGATCTGTCCTGTaGGAGAAAGGACTTCGCGGAGCTCTGTGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSNGGCLRSVL*EKGLRGALWGL Trigger: CAGCCCCCACAGAGCTCCGCGAAGTCCTTTCTCCCACAGGACAGATCTGAGGCACCCACCATTAGAAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 ENST00000671045.1 |
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| CDS CCA 72 bp | TGGATTATGAGTGCCTATGGTGCCAGCTCAGCCATGTaGGTGTCTCCAGGATGCCATCGCCAGGGAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: WIMSAYGASSAM*VSPGCHRQGVH Trigger: GTGAACTCCCTGGCGATGGCATCCTGGAGACACCCACATGGCTGAGCTGGCACCATAGGCACTCATAATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 |
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| CDS CAA 72 bp | TTTCAACCCATTGCAGATGTTCTAATGGTCTCATCCTaGGCCGATGGTGGCCCGCGTGCGCTGCCTCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: FQPIADVLMVSS*ADGGPRALPQR Trigger: ACGCTGAGGCAGCGCACGCGGGCCACCATCGGCCAAGGATGAGACCATTAGAACATCTGCAATGGGTTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609493.5 |
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| CDS CAA 90 bp | GTGTCTGTCTTTCCTTGTGATGGGGGAGAGACTAGTGTTTGGAGTTaGAGTGGGTTAGATGGCCCCCGAGGGCTCAGGATGGGCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSVFPCDGGETSVWS*SGLDGPRGLRMGIL Trigger: CAGGATGCCCATCCTGAGCCCTCGGGGGCCATCTAACCCACTCAAACTCCAAACACTAGTCTCTCCCCCATCACAAGGAAAGACAGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000610194.1 |
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| CDS CAA 90 bp | TGGGGCTGCGAAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTaGATGCTTCCTGTGTCTGTGTTGCATTCGAGGCGTTTCAACCCA | + |
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Preference number: 6 (lower is better) Translates to: WGCESRAHILAKASE*MLPVSVLHSRRFNP Trigger: TGGGTTGAAACGCCTCGAATGCAACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTTCGCAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609493.5 |
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| CDS TCA 72 bp | AAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTTaGTGCTTCCTGTGTCTGTGTCTCAACACTCCCACG | + |
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Preference number: 6 (lower is better) Translates to: KVGLTSWPKPQS*CFLCLCLNTPT Trigger: CGTGGGAGTGTTGAGACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425483.2 ENST00000430978.7 ENST00000442500.7 |
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| CDS TCA 72 bp | AAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTTaGTGCTTCCTGTGTCTGTGTAGGTCCTACGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: KVGLTSWPKPQS*CFLCLCRSYVR Trigger: ACGCACGTAGGACCTACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609861.6 ENST00000661456.1 |
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| CDS GCA 72 bp | GGCTCTACTTTCCTCCCTCCTAGCCTGGTAGGAAAGTaGGTCCATGCGATTGGTGAATCAGAATGGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSTFLPPSLVGK*VHAIGESEWAF Trigger: GAAGGCCCATTCTGATTCACCAATCGCATGGACGCACTTTCCTACCAGGCTAGGAGGGAGGAAAGTAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000609861.6 ENST00000661456.1 ENST00000671045.1 |
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| CDS GCA 72 bp | GTCTGTTCTAAGAGTGACTGTGTGAGAGCCCAGCCATaGCTGAAAATGGCAACAAGGTCGCCACACACTCCC | + |
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Preference number: 6 (lower is better) Translates to: VCSKSDCVRAQP*LKMATRSPHTP Trigger: GGGAGTGTGTGGCGACCTTGTTGCCATTTTCAGGCATGGCTGGGCTCTCACACAGTCACTCTTAGAACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608044.5 |
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| CDS CCA 72 bp | CAGGAAGGTGGCCCCGGAACAAATGGAGTCCCGCAGTaGCTCCAGCCATGTGGAATAAACCAAATTAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QEGGPGTNGVPQ*LQPCGINQISA Trigger: AGCACTAATTTGGTTTATTCCACATGGCTGGAGCCACTGCGGGACTCCATTTGTTCCGGGGCCACCTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 ENST00000671045.1 |
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| CDS CCA 72 bp | TCTGTCTTTCCTTGTGATGGGGGAGAGACTAGTGTTTaGAGTTTGAGTGGGTTAGATGGCCCCCGAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SVFPCDGGETSV*SLSGLDGPRGL Trigger: GAGCCCTCGGGGGCCATCTAACCCACTCAAACTCCAAACACTAGTCTCTCCCCCATCACAAGGAAAGACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000610194.1 |
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| CDS CCA 72 bp | TGCCCTGGAAGAGCAACAAAACCTGGAGGCTCTGGCTaGAATGACCAGGGCTACAGCGTGCATGAAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: CPGRATKPGGSG*NDQGYSVHEKQ Trigger: CTGTTTTTCATGCACGCTGTAGCCCTGGTCATTCCAGCCAGAGCCTCCAGGTTTTGTTGCTCTTCCAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671045.1 |
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| CDS TCA 72 bp | AAAGTCGGGCTCACATCCTGGCCAAAGCCTCAGAGTTaGTGCTTCCTGTGTCTGTGTTGCATTCGAGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: KVGLTSWPKPQS*CFLCLCCIRGV Trigger: AACGCCTCGAATGCAACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGCCAGGATGTGAGCCCGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609493.5 |
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| CDS TCA 72 bp | TCTGCCTTTCTTGCTGACTCAAGAAACAGTAAAAGGTaGCAGGAAGGTGGCCCCGGAACAAATGGAGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SAFLADSRNSKR*QEGGPGTNGVP Trigger: CGGGACTCCATTTGTTCCGGGGCCACCTTCCTGTCACCTTTTACTGTTTCTTGAGTCAGCAAGAAAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 ENST00000671045.1 |
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| CDS TCA 72 bp | TGCAGCTCCATTCATCATAGCAAGTGGTTTCCCTGCTaGACAAGGCAGGCAGGTCTGACAAACACAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CSSIHHSKWFPC*TRQAGLTNTVA Trigger: AGCCACTGTGTTTGTCAGACCTGCCTGCCTTGTTCAGCAGGGAAACCACTTGCTATGATGAATGGAGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608044.5 |
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| CDS CAA 72 bp | GCCAAAGCCTCAGAGTTGATGCTTCCTGTGTCTGTGTaGCATTCGAGGCGTTTCAACCCATTGCAGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: AKASELMLPVSV*HSRRFNPLQMF Trigger: GAACATCTGCAATGGGTTGAAACGCCTCGAATGCAACACAGACACAGGAAGCATCAACTCTGAGGCTTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609493.5 |
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| CDS GCA 72 bp | CTGGAATGCTGGCACAGGAGGTGTTTTCGACCTGCCTaGTTATCTAAGTTTCACATGCAGCTCCATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: LECWHRRCFRPA*LSKFHMQLHSS Trigger: TGATGAATGGAGCTGCATGTGAAACTTAGATAAGCAGGCAGGTCGAAAACACCTCCTGTGCCAGCATTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608044.5 |
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| CDS CAA 72 bp | GGAGAGTGCTGGAGTCTTCAGTCGGATCTGCCTTTCTaGCTGACTCAAGAAACAGTAAAAGGTGACAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GECWSLQSDLPF*LTQETVKGDRK Trigger: CTTCCTGTCACCTTTTACTGTTTCTTGAGTCAGCAAGAAAGGCAGATCCGACTGAAGACTCCAGCACTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000430978.7 ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 ENST00000661456.1 ENST00000671045.1 |
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| CDS GCA 72 bp | GGTGTTTTCGACCTGCCTGCTTATCTAAGTTTCACATaGAGCTCCATTCATCATAGCAAGTGGTTTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: GVFDLPAYLSFT*SSIHHSKWFPC Trigger: GCAGGGAAACCACTTGCTATGATGAATGGAGCTGCATGTGAAACTTAGATAAGCAGGCAGGTCGAAAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608044.5 |
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| CDS CAA 90 bp | CTGAGCCTTCCTCTCGAAGTCTTTGAAGTGCACTGTGTGCTTCATTaGTTTAGCTCTAAACTCTTAAAGCTGGCAGGCGTGTCTAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: LSLPLEVFEVHCVLH*FSSKLLKLAGVSKC Trigger: ACACTTAGACACGCCTGCCAGCTTTAAGAGTTTAGAGCTAAACAAATGAAGCACACAGTGCACTTCAAAGACTTCGAGAGGAAGGCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610194.1 |
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| CDS TCA 72 bp | CCATGTGGAATAAACCAAATTAGTGCTGGCAGAAACTaGACCTGGATTATGAGTGCCTATGGTGCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PCGINQISAGRN*TWIMSAYGASS Trigger: TGAGCTGGCACCATAGGCACTCATAATCCAGGTTCAGTTTCTGCCAGCACTAATTTGGTTTATTCCACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000442500.7 ENST00000608044.5 ENST00000609493.5 ENST00000609861.6 ENST00000610194.1 |
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