Pregenerated sensors for LINC00452 (Homo sapiens)
Ensembl gene IDs: ENSG00000229373Ensembl transcript IDs: ENST00000426859.1, ENST00000609661.5, ENST00000671032.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCACAGGGCCTGCGGGGGCGTCGAGCTTCACAGTGGACAAATCCTaGCAGCCTGGCACGTGGCCTCCAGCCTGGGGCCCGACACCTGCT | + |
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Preference number: 5 (lower is better) Translates to: STGPAGASSFTVDKS*QPGTWPPAWGPTPA Trigger: AGCAGGTGTCGGGCCCCAGGCTGGAGGCCACGTGCCAGGCTGGCAGGATTTGTCCACTGTGAAGCTCGACGCCCCCGCAGGCCCTGTGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000671032.1 |
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| CDS GCA 90 bp | AGCACAGGGCCTGCGGGGGCGTCGAGCTTCACAGTGGACAAATCCTaGCAGCCTGGCACGTGGCCTCCAGCCTGGGGCCCGACACCTGTG | + |
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Preference number: 5 (lower is better) Translates to: STGPAGASSFTVDKS*QPGTWPPAWGPTPV Trigger: CACAGGTGTCGGGCCCCAGGCTGGAGGCCACGTGCCAGGCTGGCAGGATTTGTCCACTGTGAAGCTCGACGCCCCCGCAGGCCCTGTGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 90 bp | CGTTTGCCTCTTTGGAGTTTCCAGGTGCTGGGCCCAAGCCCTCTGTaGAGGCCCCAGAGCAGCGGCTGGGAATTCGGAGGGTGTGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: RLPLWSFQVLGPSPL*RPQSSGWEFGGCGG Trigger: CCCTCCACACCCTCCGAATTCCCAGCCGCTGCTCTGGGGCCTGCACAGAGGGCTTGGGCCCAGCACCTGGAAACTCCAAAGAGGCAAACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS GCA 90 bp | GCCCAGGAGATGCAAGGAAGCGGAGCACCACTCTGTCCACTCAGATaGCCAGCTCTGCACTCAGCAGCCACGGCGAAGAGGGCAGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: AQEMQGSGAPLCPLR*PALHSAATAKRAAS Trigger: CGAGGCTGCCCTCTTCGCCGTGGCTGCTGAGTGCAGAGCTGGGCATCTGAGTGGACAGAGTGGTGCTCCGCTTCCTTGCATCTCCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS CCA 90 bp | GCAATGTTGGCGTGGACGTGGAAGCGTGCAGGGAACAGTCGGCACTaGCATCAAGGCCCCAGGATATGGCCATCCACCCCCGATGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: AMLAWTWKRAGNSRH*HQGPRIWPSTPDGP Trigger: GGGGCCATCGGGGGTGGATGGCCATATCCTGGGGCCTTGATGCCAGTGCCGACTGTTCCCTGCACGCTTCCACGTCCACGCCAACATTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS GCA 90 bp | GCCCCCAGGCCCTACCCCGAGGGCTTCCTGCAGGACAGTGCACATTaGAGCTGCTGCAGCAGGAACGGGATGCACTGGTCACTCACAAAC | + |
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Preference number: 5 (lower is better) Translates to: APRPYPEGFLQDSAH*SCCSRNGMHWSLTN Trigger: GTTTGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGTCCTGCAGGAAGCCCTCGGGGTAGGGCCTGGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS TCA 90 bp | CTCATTCAGGTGCGATGGAATGGGAGCACTGGAGACACAGACAGCTaGACGTCGCACGCTGTTGCCCAAGGCTGGTCCGGCTGCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LIQVRWNGSTGDTDS*TSHAVAQGWSGCWG Trigger: GCCCCAGCAGCCGGACCAGCCTTGGGCAACAGCGTGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCCATCGCACCTGAATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS GCA 90 bp | AGGAGCGATGCAGTGGGCACAGGTCACCACGCATGGCCCAGGAGATaGAAGGAAGCGGAGCACCACTCTGTCCACTCAGATGCCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: RSDAVGTGHHAWPRR*KEAEHHSVHSDAQL Trigger: GAGCTGGGCATCTGAGTGGACAGAGTGGTGCTCCGCTTCCTTGCATCTCCTGGGCCATGCGTGGTGACCTGTGCCCACTGCATCGCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS GCA 90 bp | CGCTGTTATGGGCGGGACCCCTGTAAGCCCAGAGTCAGCGCTTGCTaGATCCCTGCTCTCAGAGGCGTGTGGCAGTTGCCTTTCCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RCYGRDPCKPRVSAC*IPALRGVWQLPFPV Trigger: CACAGGGAAAGGCAACTGCCACACGCCTCTGAGAGCAGGGATGCAGCAAGCGCTGACTCTGGGCTTACAGGGGTCCCGCCCATAACAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 90 bp | GTGCGCTGTTATGGGCGGGACCCCTGTAAGCCCAGAGTCAGCGCTTaGTGCATCCCTGCTCTCAGAGGCGTGTGGCAGTTGCCTTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VRCYGRDPCKPRVSA*CIPALRGVWQLPFP Trigger: AGGGAAAGGCAACTGCCACACGCCTCTGAGAGCAGGGATGCAGCAAGCGCTGACTCTGGGCTTACAGGGGTCCCGCCCATAACAGCGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 90 bp | CACAGGGCACACAGGAGCGATGCAGTGGGCACAGGTCACCACGCATaGCCCAGGAGATGCAAGGAAGCGGAGCACCACTCTGTCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: HRAHRSDAVGTGHHA*PRRCKEAEHHSVHS Trigger: TGAGTGGACAGAGTGGTGCTCCGCTTCCTTGCATCTCCTGGGCCATGCGTGGTGACCTGTGCCCACTGCATCGCTCCTGTGTGCCCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS GCA 90 bp | CCCTACCCCGAGGGCTTCCTGCAGGACAGTGCACATTGCAGCTGCTaGAGCAGGAACGGGATGCACTGGTCACTCACAAACCACAAAGCG | + |
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Preference number: 5 (lower is better) Translates to: PYPEGFLQDSAHCSC*SRNGMHWSLTNHKA Trigger: CGCTTTGTGGTTTGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGTCCTGCAGGAAGCCCTCGGGGTAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 90 bp | AAGCCCAGAGTCAGCGCTTGCTGCATCCCTGCTCTCAGAGGCGTGTaGCAGTTGCCTTTCCCTGTGGAGGGTTGGGTGAGATTGCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KPRVSACCIPALRGV*QLPFPVEGWVRLPL Trigger: CAAGGGCAATCTCACCCAACCCTCCACAGGGAAAGGCAACTGCCACACGCCTCTGAGAGCAGGGATGCAGCAAGCGCTGACTCTGGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 90 bp | AGGCCCTACCCCGAGGGCTTCCTGCAGGACAGTGCACATTGCAGCTaGTGCAGCAGGAACGGGATGCACTGGTCACTCACAAACCACAAA | + |
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Preference number: 5 (lower is better) Translates to: RPYPEGFLQDSAHCS*CSRNGMHWSLTNHK Trigger: TTTGTGGTTTGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGTCCTGCAGGAAGCCCTCGGGGTAGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 90 bp | GATGTTGGCCTTTCTGCCTCCAGGACTGAGCGAGAAAAATGTTTGTaGGGTGAGCCCTGGTCTGTGGTGCGCTGTTATGGGCGGGACCCC | + |
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Preference number: 5 (lower is better) Translates to: DVGLSASRTEREKCL*GEPWSVVRCYGRDP Trigger: GGGGTCCCGCCCATAACAGCGCACCACAGACCAGGGCTCACCCCACAAACATTTTTCTCGCTCAGTCCTGGAGGCAGAAAGGCCAACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS TCA 90 bp | TGGTGGACACAGACGTGGACAAGGTGTCCCAGAGCATCCTGGTCATaGTGCAGGAGAAGCTCGAACGCACGCTCAGCCCTGTTTTACCTC | + |
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Preference number: 5 (lower is better) Translates to: WWTQTWTRCPRASWS*CRRSSNARSALFYL Trigger: GAGGTAAAACAGGGCTGAGCGTGCGTTCGAGCTTCTCCTGCATCATGACCAGGATGCTCTGGGACACCTTGTCCACGTCTGTGTCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS CCA 90 bp | GTCATCACTGTAGCTGTTCCAGTCCGTGACATAGCCTTGCAATGTTaGCGTGGACGTGGAAGCGTGCAGGGAACAGTCGGCACTGGCATC | + |
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Preference number: 5 (lower is better) Translates to: VITVAVPVRDIALQC*RGRGSVQGTVGTGI Trigger: GATGCCAGTGCCGACTGTTCCCTGCACGCTTCCACGTCCACGCCAACATTGCAAGGCTATGTCACGGACTGGAACAGCTACAGTGATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS CCA 90 bp | TGTCTCTCCCAAATCCCTCATTCAGGTGCGATGGAATGGGAGCACTaGAGACACAGACAGCTGAACGTCGCACGCTGTTGCCCAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CLSQIPHSGAMEWEH*RHRQLNVARCCPRL Trigger: CAGCCTTGGGCAACAGCGTGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCCATCGCACCTGAATGAGGGATTTGGGAGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 90 bp | TTTACCTCCCAAATCCCTCATTCAGGTGCGATGGAATGGGAGCACTaGAGACACAGACAGCTGAACGTCGCACGCTGTTGCCCAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FTSQIPHSGAMEWEH*RHRQLNVARCCPRL Trigger: CAGCCTTGGGCAACAGCGTGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCCATCGCACCTGAATGAGGGATTTGGGAGGTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS CCA 90 bp | CAGCCCTGTTTTACCTCCCAAATCCCTCATTCAGGTGCGATGGAATaGGAGCACTGGAGACACAGACAGCTGAACGTCGCACGCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: QPCFTSQIPHSGAME*EHWRHRQLNVARCC Trigger: GCAACAGCGTGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCCATCGCACCTGAATGAGGGATTTGGGAGGTAAAACAGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS TCA 90 bp | GAAGGACGATTGAGGGCCCTAGATCTCTGGGTGCAGGGCACCTGGTaGAACGACCCGCCACACATGACTGATTTTCAGCCAAAGATCACT | + |
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Preference number: 5 (lower is better) Translates to: EGRLRALDLWVQGTW*NDPPHMTDFQPKIT Trigger: AGTGATCTTTGGCTGAAAATCAGTCATGTGTGGCGGGTCGTTTCACCAGGTGCCCTGCACCCAGAGATCTAGGGCCCTCAATCGTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 90 bp | GTCAGACGAGGGTTAAGTCAAGTCATGCACCCTGTTAGTCACCCCTaGCCCATGTTTCGGGTGCAGATGTCCTCATCGCTGACTCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: VRRGLSQVMHPVSHP*PMFRVQMSSSLTLG Trigger: ACCTAGAGTCAGCGATGAGGACATCTGCACCCGAAACATGGGGCAGGGGTGACTAACAGGGTGCATGACTTGACTTAACCCTCGTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 90 bp | CAGGACAGTGCACATTGCAGCTGCTGCAGCAGGAACGGGATGCACTaGTCACTCACAAACCACAAAGCGGAACTGGAAGACATGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: QDSAHCSCCSRNGMH*SLTNHKAELEDMKQ Trigger: CTGCTTCATGTCTTCCAGTTCCGCTTTGTGGTTTGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS GCA 90 bp | ACCTTTGCAGGCTCAGCTGTGAAGTTTCTAGATTCCACATGCACTTaGCCCATGAGAGGCCAGGATGCTGCTGGAGTTGTGTTCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: TFAGSAVKFLDSTCT*PMRGQDAAGVVFTS Trigger: TGAGGTGAACACAACTCCAGCAGCATCCTGGCCTCTCATGGGGCAAGTGCATGTGGAATCTAGAAACTTCACAGCTGAGCCTGCAAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000671032.1 |
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| CDS CCA 90 bp | GTCCTTTCAGCCCCTCCGTGTTTATTTCCTAGGGAAACTCTGGTTTaGAACCATAATGTGTGCACCCAACACACTGGGTGCTGGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: VLSAPPCLFPRETLV*NHNVCTQHTGCWEG Trigger: TCCCTCCCAGCACCCAGTGTGTTGGGTGCACACATTATGGTTCCAAACCAGAGTTTCCCTAGGAAATAAACACGGAGGGGCTGAAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS GCA 90 bp | GAGCCAATATATATCTCGTCCACCTGTAACGCCTGTCCCCTAAAGTaGATGAAGCCAGACTGTAATCCAGGCACCTCAGGAACACTCACT | + |
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Preference number: 5 (lower is better) Translates to: EPIYISSTCNACPLK*MKPDCNPGTSGTLT Trigger: AGTGAGTGTTCCTGAGGTGCCTGGATTACAGTCTGGCTTCATGCACTTTAGGGGACAGGCGTTACAGGTGGACGAGATATATATTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS TCA 90 bp | AAAATAAAGAGGAAGACCTGGGATCCAACACATAGTGGATTCAACTaGGAAAAGTTGTGGAGGGAAGTCCCAGGAGGAGAGCTGCACACT | + |
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Preference number: 5 (lower is better) Translates to: KIKRKTWDPTHSGFN*EKLWREVPGGELHT Trigger: AGTGTGCAGCTCTCCTCCTGGGACTTCCCTCCACAACTTTTCTCAGTTGAATCCACTATGTGTTGGATCCCAGGTCTTCCTCTTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 90 bp | ACCAAATCTATATTTTGTTATTATCACAATACCATGGCAACAGTCTaGAAACCAGGAAGAGAGCCTCACCAGACGCCAGCCATGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: TKSIFCYYHNTMATV*KPGREPHQTPAMLA Trigger: TGCCAGCATGGCTGGCGTCTGGTGAGGCTCTCTTCCTGGTTTGCAGACTGTTGCCATGGTATTGTGATAATAACAAAATATAGATTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 90 bp | CTAATGGTGAGCAACTTGTTTAAAAAGGAAAATTCTGTATGGCTGTaGATCTGCGGCTGCTGTCAAAGGGTTGCTTTCAGTAACTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LMVSNLFKKENSVWL*ICGCCQRVAFSNLP Trigger: TGGCAAGTTACTGAAAGCAACCCTTTGACAGCAGCCGCAGATCCACAGCCATACAGAATTTTCCTTTTTAAACAAGTTGCTCACCATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 90 bp | TCACATCTATTAAGGTTCATCTGTAAAATCACTGTAGTTGGGGTTTaGAACACAGAGAAACTCACACATGAAGCAGCACTGAATACACGG | + |
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Preference number: 5 (lower is better) Translates to: SHLLRFICKITVVGV*NTEKLTHEAALNTR Trigger: CCGTGTATTCAGTGCTGCTTCATGTGTGAGTTTCTCTGTGTTCCAAACCCCAACTACAGTGATTTTACAGATGAACCTTAATAGATGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671032.1 |
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| CDS CCA 90 bp | ACTCAAGAGGTTCCAGGTCTCTTAGAAGCTCTGGTGTTGGGAATCTaGGACGAAGACCAAATCTATATTTTGTTATTATCACAATACCAT | + |
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Preference number: 5 (lower is better) Translates to: TQEVPGLLEALVLGI*DEDQIYILLLSQYH Trigger: ATGGTATTGTGATAATAACAAAATATAGATTTGGTCTTCGTCCCAGATTCCCAACACCAGAGCTTCTAAGAGACCTGGAACCTCTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 72 bp | CCTGCGGGGGCGTCGAGCTTCACAGTGGACAAATCCTaGCAGCCTGGCACGTGGCCTCCAGCCTGGGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PAGASSFTVDKS*QPGTWPPAWGP Trigger: CGGGCCCCAGGCTGGAGGCCACGTGCCAGGCTGGCAGGATTTGTCCACTGTGAAGCTCGACGCCCCCGCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS CAA 90 bp | GGAATGGGAGCACTGGAGACACAGACAGCTGAACGTCGCACGCTGTaGCCCAAGGCTGGTCCGGCTGCTGGGGCTGCACGCCAGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GMGALETQTAERRTL*PKAGPAAGAARQAG Trigger: CCCGGCCTGGCGTGCAGCCCCAGCAGCCGGACCAGCCTTGGGCAACAGCGTGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 72 bp | GGCGTCGAGCTTCACAGTGGACAAATCCTGCCAGCCTaGCACGTGGCCTCCAGCCTGGGGCCCGACACCTGC | + |
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Preference number: 6 (lower is better) Translates to: GVELHSGQILPA*HVASSLGPDTC Trigger: GCAGGTGTCGGGCCCCAGGCTGGAGGCCACGTGCCAGGCTGGCAGGATTTGTCCACTGTGAAGCTCGACGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000671032.1 |
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| CDS GCA 72 bp | CACTGGAGACACAGACAGCTGAACGTCGCACGCTGTTaGCCAAGGCTGGTCCGGCTGCTGGGGCTGCACGCC | + |
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Preference number: 6 (lower is better) Translates to: HWRHRQLNVARC*PRLVRLLGLHA Trigger: GGCGTGCAGCCCCAGCAGCCGGACCAGCCTTGGGCAACAGCGTGCGACGTTCAGCTGTCTGTGTCTCCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 72 bp | GGCGTCGAGCTTCACAGTGGACAAATCCTGCCAGCCTaGCACGTGGCCTCCAGCCTGGGGCCCGACACCTGT | + |
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Preference number: 6 (lower is better) Translates to: GVELHSGQILPA*HVASSLGPDTC Trigger: ACAGGTGTCGGGCCCCAGGCTGGAGGCCACGTGCCAGGCTGGCAGGATTTGTCCACTGTGAAGCTCGACGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CAA 90 bp | AGCCCCCAGGCCCTACCCCGAGGGCTTCCTGCAGGACAGTGCACATaGCAGCTGCTGCAGCAGGAACGGGATGCACTGGTCACTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: SPQALPRGLPAGQCT*QLLQQERDALVTHK Trigger: TTTGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGTCCTGCAGGAAGCCCTCGGGGTAGGGCCTGGGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS TCA 72 bp | GTGCGATGGAATGGGAGCACTGGAGACACAGACAGCTaGACGTCGCACGCTGTTGCCCAAGGCTGGTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: VRWNGSTGDTDS*TSHAVAQGWSG Trigger: GCCGGACCAGCCTTGGGCAACAGCGTGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCCATCGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS GCA 72 bp | CCCTACCCCGAGGGCTTCCTGCAGGACAGTGCACATTaGAGCTGCTGCAGCAGGAACGGGATGCACTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PYPEGFLQDSAH*SCCSRNGMHWS Trigger: TGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGTCCTGCAGGAAGCCCTCGGGGTAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS GCA 72 bp | TATGGGCGGGACCCCTGTAAGCCCAGAGTCAGCGCTTaGTGCATCCCTGCTCTCAGAGGCGTGTGGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: YGRDPCKPRVSA*CIPALRGVWQL Trigger: CAACTGCCACACGCCTCTGAGAGCAGGGATGCAGCAAGCGCTGACTCTGGGCTTACAGGGGTCCCGCCCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 72 bp | CACAGGAGCGATGCAGTGGGCACAGGTCACCACGCATaGCCCAGGAGATGCAAGGAAGCGGAGCACCACTCT | + |
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Preference number: 6 (lower is better) Translates to: HRSDAVGTGHHA*PRRCKEAEHHS Trigger: AGAGTGGTGCTCCGCTTCCTTGCATCTCCTGGGCCATGCGTGGTGACCTGTGCCCACTGCATCGCTCCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS CCA 72 bp | ACGGTCACATGCACAGGGCACACAGGAGCGATGCAGTaGGCACAGGTCACCACGCATGGCCCAGGAGATGCA | + |
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Preference number: 6 (lower is better) Translates to: TVTCTGHTGAMQ*AQVTTHGPGDA Trigger: TGCATCTCCTGGGCCATGCGTGGTGACCTGTGCCCACTGCATCGCTCCTGTGTGCCCTGTGCATGTGACCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS GCA 72 bp | GGACATGAACCCGTTTGCCTCTTTGGAGTTTCCAGGTaGTGGGCCCAAGCCCTCTGTGCAGGCCCCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GHEPVCLFGVSR*WAQALCAGPRA Trigger: TGCTCTGGGGCCTGCACAGAGGGCTTGGGCCCAGCACCTGGAAACTCCAAAGAGGCAAACGGGTTCATGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS GCA 72 bp | ATGCAAGGAAGCGGAGCACCACTCTGTCCACTCAGATaGCCAGCTCTGCACTCAGCAGCCACGGCGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: MQGSGAPLCPLR*PALHSAATAKR Trigger: CCTCTTCGCCGTGGCTGCTGAGTGCAGAGCTGGGCATCTGAGTGGACAGAGTGGTGCTCCGCTTCCTTGCAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS GCA 72 bp | GCAGTGGGCACAGGTCACCACGCATGGCCCAGGAGATaGAAGGAAGCGGAGCACCACTCTGTCCACTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: AVGTGHHAWPRR*KEAEHHSVHSD Trigger: ATCTGAGTGGACAGAGTGGTGCTCCGCTTCCTTGCATCTCCTGGGCCATGCGTGGTGACCTGTGCCCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS GCA 72 bp | CCCGAGGGCTTCCTGCAGGACAGTGCACATTGCAGCTaGTGCAGCAGGAACGGGATGCACTGGTCACTCACA | + |
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Preference number: 6 (lower is better) Translates to: PEGFLQDSAHCS*CSRNGMHWSLT Trigger: TGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGTCCTGCAGGAAGCCCTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 72 bp | AGGGTGACGCCTGGATGGGCATCGTGGAAAAGCCCCTaGGGAGATTCTGAGCAGGACTGGTGGACACAGACG | + |
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Preference number: 6 (lower is better) Translates to: RVTPGWASWKSP*GDSEQDWWTQT Trigger: CGTCTGTGTCCACCAGTCCTGCTCAGAATCTCCCCAGGGGCTTTTCCACGATGCCCATCCAGGCGTCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 72 bp | GTCAGCGCTTGCTGCATCCCTGCTCTCAGAGGCGTGTaGCAGTTGCCTTTCCCTGTGGAGGGTTGGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VSACCIPALRGV*QLPFPVEGWVR Trigger: TCTCACCCAACCCTCCACAGGGAAAGGCAACTGCCACACGCCTCTGAGAGCAGGGATGCAGCAAGCGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS TCA 72 bp | CAGACGTGGACAAGGTGTCCCAGAGCATCCTGGTCATaGTGCAGGAGAAGCTCGAACGCACGCTCAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: QTWTRCPRASWS*CRRSSNARSAL Trigger: CAGGGCTGAGCGTGCGTTCGAGCTTCTCCTGCATCATGACCAGGATGCTCTGGGACACCTTGTCCACGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS TCA 72 bp | CAGACGTGGACAAGGTGTCCCAGAGCATCCTGGTCATaGTGCAGGAGAAGCTCGAACGCACGCTCAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QTWTRCPRASWS*CRRSSNARSAL Trigger: GAGGGCTGAGCGTGCGTTCGAGCTTCTCCTGCATCATGACCAGGATGCTCTGGGACACCTTGTCCACGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 72 bp | GAGGGCTTCCTGCAGGACAGTGCACATTGCAGCTGCTaGAGCAGGAACGGGATGCACTGGTCACTCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: EGFLQDSAHCSC*SRNGMHWSLTN Trigger: GTTTGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGTCCTGCAGGAAGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 72 bp | GTAGCTGTTCCAGTCCGTGACATAGCCTTGCAATGTTaGCGTGGACGTGGAAGCGTGCAGGGAACAGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: VAVPVRDIALQC*RGRGSVQGTVG Trigger: GCCGACTGTTCCCTGCACGCTTCCACGTCCACGCCAACATTGCAAGGCTATGTCACGGACTGGAACAGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS CAA 90 bp | CTCAGGTGTGTCATCACTGTAGCTGTTCCAGTCCGTGACATAGCCTaGCAATGTTGGCGTGGACGTGGAAGCGTGCAGGGAACAGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: LRCVITVAVPVRDIA*QCWRGRGSVQGTVG Trigger: GCCGACTGTTCCCTGCACGCTTCCACGTCCACGCCAACATTGCAAGGCTATGTCACGGACTGGAACAGCTACAGTGATGACACACCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS TCA 72 bp | CTCTCCCCTCCCGCTTCCTGGAGGTTGGGGTGGATCTaGAAGTCCTCACCTATAAGTCCTGCCTTGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LSPPASWRLGWI*KSSPISPALVF Trigger: AAAGACCAAGGCAGGACTTATAGGTGAGGACTTTCAGATCCACCCCAACCTCCAGGAAGCGGGAGGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 72 bp | GGAAGCGATCTGACAAAACCTGGACATGAACCCGTTTaGCTCTTTGGAGTTTCCAGGTGCTGGGCCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GSDLTKPGHEPV*LFGVSRCWAQA Trigger: GGCTTGGGCCCAGCACCTGGAAACTCCAAAGAGGCAAACGGGTTCATGTCCAGGTTTTGTCAGATCGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426859.1 ENST00000609661.5 ENST00000671032.1 |
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| CDS GCA 72 bp | ACAGTGCACATTGCAGCTGCTGCAGCAGGAACGGGATaGACTGGTCACTCACAAACCACAAAGCGGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: TVHIAAAAAGTG*TGHSQTTKRNW Trigger: CCAGTTCCGCTTTGTGGTTTGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS GCA 72 bp | GGGTTAAGTCAAGTCATGCACCCTGTTAGTCACCCCTaGCCCATGTTTCGGGTGCAGATGTCCTCATCGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLSQVMHPVSHP*PMFRVQMSSSL Trigger: CAGCGATGAGGACATCTGCACCCGAAACATGGGGCAGGGGTGACTAACAGGGTGCATGACTTGACTTAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 72 bp | CAAATCCCTCATTCAGGTGCGATGGAATGGGAGCACTaGAGACACAGACAGCTGAACGTCGCACGCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: QIPHSGAMEWEH*RHRQLNVARCC Trigger: GCAACAGCGTGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCCATCGCACCTGAATGAGGGATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 72 bp | GCACATTGCAGCTGCTGCAGCAGGAACGGGATGCACTaGTCACTCACAAACCACAAAGCGGAACTGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: AHCSCCSRNGMH*SLTNHKAELED Trigger: GTCTTCCAGTTCCGCTTTGTGGTTTGTGAGTGACCAGTGCATCCCGTTCCTGCTGCAGCAGCTGCAATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS CCA 72 bp | CTTTCTGCCTCCAGGACTGAGCGAGAAAAATGTTTGTaGGGTGAGCCCTGGTCTGTGGTGCGCTGTTATGGG | + |
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Preference number: 6 (lower is better) Translates to: LSASRTEREKCL*GEPWSVVRCYG Trigger: CCCATAACAGCGCACCACAGACCAGGGCTCACCCCACAAACATTTTTCTCGCTCAGTCCTGGAGGCAGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CAA 72 bp | GTCATCACTGTAGCTGTTCCAGTCCGTGACATAGCCTaGCAATGTTGGCGTGGACGTGGAAGCGTGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VITVAVPVRDIA*QCWRGRGSVQG Trigger: TCCCTGCACGCTTCCACGTCCACGCCAACATTGCAAGGCTATGTCACGGACTGGAACAGCTACAGTGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS GCA 72 bp | GGCTCAGCTGTGAAGTTTCTAGATTCCACATGCACTTaGCCCATGAGAGGCCAGGATGCTGCTGGAGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSAVKFLDSTCT*PMRGQDAAGVV Trigger: CACAACTCCAGCAGCATCCTGGCCTCTCATGGGGCAAGTGCATGTGGAATCTAGAAACTTCACAGCTGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000671032.1 |
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| CDS CCA 72 bp | TGTCTCTCCCAAATCCCTCATTCAGGTGCGATGGAATaGGAGCACTGGAGACACAGACAGCTGAACGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: CLSQIPHSGAME*EHWRHRQLNVA Trigger: TGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCCATCGCACCTGAATGAGGGATTTGGGAGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CAA 90 bp | CACCTTTGCAGGCTCAGCTGTGAAGTTTCTAGATTCCACATGCACTaGCCCCATGAGAGGCCAGGATGCTGCTGGAGTTGTGTTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: HLCRLSCEVSRFHMH*PHERPGCCWSCVHL Trigger: GAGGTGAACACAACTCCAGCAGCATCCTGGCCTCTCATGGGGCAAGTGCATGTGGAATCTAGAAACTTCACAGCTGAGCCTGCAAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000671032.1 |
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| CDS TCA 72 bp | GGGTGCAGGGCACCTGGTGAAACGACCCGCCACACATaGCTGATTTTCAGCCAAAGATCACTTGTAGCTTAC | + |
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Preference number: 6 (lower is better) Translates to: GCRAPGETTRHT*LIFSQRSLVAY Trigger: GTAAGCTACAAGTGATCTTTGGCTGAAAATCAGTCATGTGTGGCGGGTCGTTTCACCAGGTGCCCTGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 72 bp | GTTGGGGTGGATCTGAAAGTCCTCACCTATAAGTCCTaGCTTGGTCTTTCTGGGGAGCAGTCCCTTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: VGVDLKVLTYKS*LGLSGEQSLPE Trigger: TTCAGGAAGGGACTGCTCCCCAGAAAGACCAAGGCAGGACTTATAGGTGAGGACTTTCAGATCCACCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 72 bp | TTTACCTCCCAAATCCCTCATTCAGGTGCGATGGAATaGGAGCACTGGAGACACAGACAGCTGAACGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: FTSQIPHSGAME*EHWRHRQLNVA Trigger: TGCGACGTTCAGCTGTCTGTGTCTCCAGTGCTCCCATTCCATCGCACCTGAATGAGGGATTTGGGAGGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS CAA 90 bp | TGGCTGTGGATCTGCGGCTGCTGTCAAAGGGTTGCTTTCAGTAACTaGCCAATAACGGTGGAGCTGTTGTGCTTGCTTCCTAGCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: WLWICGCCQRVAFSN*PITVELLCLLPSQR Trigger: TCTCTGGCTAGGAAGCAAGCACAACAGCTCCACCGTTATTGGCAAGTTACTGAAAGCAACCCTTTGACAGCAGCCGCAGATCCACAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS TCA 72 bp | AACCACAAAGCGGAACTGGAAGACATGAAGCAGCACTaGATACACGGGAAAGACACGGTCACATGCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: NHKAELEDMKQH*IHGKDTVTCTG Trigger: CCCTGTGCATGTGACCGTGTCTTTCCCGTGTATTCAGTGCTGCTTCATGTCTTCCAGTTCCGCTTTGTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426859.1 ENST00000609661.5 |
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| CDS GCA 72 bp | TATATCTCGTCCACCTGTAACGCCTGTCCCCTAAAGTaGATGAAGCCAGACTGTAATCCAGGCACCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: YISSTCNACPLK*MKPDCNPGTSG Trigger: TCCTGAGGTGCCTGGATTACAGTCTGGCTTCATGCACTTTAGGGGACAGGCGTTACAGGTGGACGAGATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 72 bp | GCCCCTCCGTGTTTATTTCCTAGGGAAACTCTGGTTTaGAACCATAATGTGTGCACCCAACACACTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: APPCLFPRETLV*NHNVCTQHTGC Trigger: GCACCCAGTGTGTTGGGTGCACACATTATGGTTCCAAACCAGAGTTTCCCTAGGAAATAAACACGGAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426859.1 |
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| CDS TCA 72 bp | AGGAAGACCTGGGATCCAACACATAGTGGATTCAACTaGGAAAAGTTGTGGAGGGAAGTCCCAGGAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: RKTWDPTHSGFN*EKLWREVPGGE Trigger: CTCTCCTCCTGGGACTTCCCTCCACAACTTTTCTCAGTTGAATCCACTATGTGTTGGATCCCAGGTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CAA 72 bp | ATCTGCGGCTGCTGTCAAAGGGTTGCTTTCAGTAACTaGCCAATAACGGTGGAGCTGTTGTGCTTGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ICGCCQRVAFSN*PITVELLCLLP Trigger: AGGAAGCAAGCACAACAGCTCCACCGTTATTGGCAAGTTACTGAAAGCAACCCTTTGACAGCAGCCGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 72 bp | ATATTTTGTTATTATCACAATACCATGGCAACAGTCTaGAAACCAGGAAGAGAGCCTCACCAGACGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: IFCYYHNTMATV*KPGREPHQTPA Trigger: GGCTGGCGTCTGGTGAGGCTCTCTTCCTGGTTTGCAGACTGTTGCCATGGTATTGTGATAATAACAAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CAA 72 bp | TTCCGGCCAACCAGAAGCTCTCTGAACTCTGTCCTTTaGGGATTTTATGGAGGCTATCATGTAGGCATGATT | + |
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Preference number: 6 (lower is better) Translates to: FRPTRSSLNSVL*GFYGGYHVGMI Trigger: AATCATGCCTACATGATAGCCTCCATAAAATCCCAAAAGGACAGAGTTCAGAGAGCTTCTGGTTGGCCGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CAA 72 bp | GTTGCTTTCAGTAACTTGCCAATAACGGTGGAGCTGTaGTGCTTGCTTCCTAGCCAGAGATCGTGTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: VAFSNLPITVEL*CLLPSQRSCQI Trigger: TATTTGACACGATCTCTGGCTAGGAAGCAAGCACAACAGCTCCACCGTTATTGGCAAGTTACTGAAAGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS GCA 72 bp | GCTTTCAGTAACTTGCCAATAACGGTGGAGCTGTTGTaGTTGCTTCCTAGCCAGAGATCGTGTCAAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: AFSNLPITVELL*LLPSQRSCQIK Trigger: TTTTATTTGACACGATCTCTGGCTAGGAAGCAAGCACAACAGCTCCACCGTTATTGGCAAGTTACTGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CAA 90 bp | GAAGCTCTGGTGTTGGGAATCTGGGACGAAGACCAAATCTATATTTaGTTATTATCACAATACCATGGCAACAGTCTGCAAACCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: EALVLGIWDEDQIYI*LLSQYHGNSLQTRK Trigger: CTTCCTGGTTTGCAGACTGTTGCCATGGTATTGTGATAATAACAAAATATAGATTTGGTCTTCGTCCCAGATTCCCAACACCAGAGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CCA 72 bp | GTTCCAGGTCTCTTAGAAGCTCTGGTGTTGGGAATCTaGGACGAAGACCAAATCTATATTTTGTTATTATCA | + |
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Preference number: 6 (lower is better) Translates to: VPGLLEALVLGI*DEDQIYILLLS Trigger: TGATAATAACAAAATATAGATTTGGTCTTCGTCCCAGATTCCCAACACCAGAGCTTCTAAGAGACCTGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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| CDS CAA 72 bp | TTTGGGATTTTATGGAGGCTATCATGTAGGCATGATTaGTTAAATCACTGTCCACTGGTGATCAACTTGACC | + |
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Preference number: 6 (lower is better) Translates to: FGILWRLSCRHD*LNHCPLVINLT Trigger: GGTCAAGTTGATCACCAGTGGACAGTGATTTAACAAATCATGCCTACATGATAGCCTCCATAAAATCCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609661.5 |
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