Pregenerated sensors for LINC00449 (Homo sapiens)

Ensembl gene IDs: ENSG00000203441

Ensembl transcript IDs: ENST00000366259.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCCCTTAAAGAGATGTGTGCACACAATCACTGCCCAATGCAAGAATaGACCACTGCATCCAATGCTTGGAAATTGTCCGTGAAGATGCCT	+
Preference number: 5 (lower is better) Translates to: SLKEMCAHNHCPMQE*TTASNAWKLSVKMP Trigger: AGGCATCTTCACGGACAATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCATTGGGCAGTGATTGTGTGCACACATCTCTTTAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS GCA 90 bp	ACCCCATTTCCACTCTCCCTTAAAGAGATGTGTGCACACAATCACTaGCCAATGCAAGAATGCACCACTGCATCCAATGCTTGGAAATTG	+
Preference number: 5 (lower is better) Translates to: TPFPLSLKEMCAHNH*PMQECTTASNAWKL Trigger: CAATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCATTGGGCAGTGATTGTGTGCACACATCTCTTTAAGGGAGAGTGGAAATGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS CCA 90 bp	CACAATCACTGCCCAATGCAAGAATGCACCACTGCATCCAATGCTTaGAAATTGTCCGTGAAGATGCCTTTGAGTAGCTGTCTATTTGAG	+
Preference number: 5 (lower is better) Translates to: HNHCPMQECTTASNA*KLSVKMPLSSCLFE Trigger: CTCAAATAGACAGCTACTCAAAGGCATCTTCACGGACAATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCATTGGGCAGTGATTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS GCA 90 bp	GAGTTCACTGGCCCTCAACTTTCTGAGCTTACTATTTCACAAACCTaGCTATTCTTGAATTCTGAGCTGGAGGTCATGATTCTCTCTTAT	+
Preference number: 5 (lower is better) Translates to: EFTGPQLSELTISQT*LFLNSELEVMILSY Trigger: ATAAGAGAGAATCATGACCTCCAGCTCAGAATTCAAGAATAGGCAGGTTTGTGAAATAGTAAGCTCAGAAAGTTGAGGGCCAGTGAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS GCA 72 bp	TGCACACAATCACTGCCCAATGCAAGAATGCACCACTaGATCCAATGCTTGGAAATTGTCCGTGAAGATGCC	+
Preference number: 6 (lower is better) Translates to: CTQSLPNARMHH*IQCLEIVREDA Trigger: GGCATCTTCACGGACAATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCATTGGGCAGTGATTGTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS GCA 72 bp	GAGATGTGTGCACACAATCACTGCCCAATGCAAGAATaGACCACTGCATCCAATGCTTGGAAATTGTCCGTG	+
Preference number: 6 (lower is better) Translates to: EMCAHNHCPMQE*TTASNAWKLSV Trigger: CACGGACAATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCATTGGGCAGTGATTGTGTGCACACATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS CCA 72 bp	TGCCCAATGCAAGAATGCACCACTGCATCCAATGCTTaGAAATTGTCCGTGAAGATGCCTTTGAGTAGCTGT	+
Preference number: 6 (lower is better) Translates to: CPMQECTTASNA*KLSVKMPLSSC Trigger: ACAGCTACTCAAAGGCATCTTCACGGACAATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCATTGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS CAA 90 bp	TGCACCACTGCATCCAATGCTTGGAAATTGTCCGTGAAGATGCCTTaGAGTAGCTGTCTATTTGAGGATTTGTGGCTAATTCCTCCCCAT	+
Preference number: 6 (lower is better) Translates to: CTTASNAWKLSVKMP*SSCLFEDLWLIPPH Trigger: ATGGGGAGGAATTAGCCACAAATCCTCAAATAGACAGCTACTCAAAGGCATCTTCACGGACAATTTCCAAGCATTGGATGCAGTGGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS CAA 90 bp	CACTGCCCAATGCAAGAATGCACCACTGCATCCAATGCTTGGAAATaGTCCGTGAAGATGCCTTTGAGTAGCTGTCTATTTGAGGATTTG	+
Preference number: 6 (lower is better) Translates to: HCPMQECTTASNAWK*SVKMPLSSCLFEDL Trigger: CAAATCCTCAAATAGACAGCTACTCAAAGGCATCTTCACGGACAATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCATTGGGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS GCA 72 bp	CCCTTAAAGAGATGTGTGCACACAATCACTGCCCAATaGAAGAATGCACCACTGCATCCAATGCTTGGAAAT	+
Preference number: 6 (lower is better) Translates to: PLKRCVHTITAQ*KNAPLHPMLGN Trigger: ATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCATTGGGCAGTGATTGTGTGCACACATCTCTTTAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS GCA 72 bp	GGCCCTCAACTTTCTGAGCTTACTATTTCACAAACCTaGCTATTCTTGAATTCTGAGCTGGAGGTCATGATT	+
Preference number: 6 (lower is better) Translates to: GPQLSELTISQT*LFLNSELEVMI Trigger: AATCATGACCTCCAGCTCAGAATTCAAGAATAGGCAGGTTTGTGAAATAGTAAGCTCAGAAAGTTGAGGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS CAA 72 bp	ATGCAAGAATGCACCACTGCATCCAATGCTTGGAAATaGTCCGTGAAGATGCCTTTGAGTAGCTGTCTATTT	+
Preference number: 6 (lower is better) Translates to: MQECTTASNAWK*SVKMPLSSCLF Trigger: AAATAGACAGCTACTCAAAGGCATCTTCACGGACAATTTCCAAGCATTGGATGCAGTGGTGCATTCTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS CAA 72 bp	GCATCCAATGCTTGGAAATTGTCCGTGAAGATGCCTTaGAGTAGCTGTCTATTTGAGGATTTGTGGCTAATT	+
Preference number: 6 (lower is better) Translates to: ASNAWKLSVKMP*SSCLFEDLWLI Trigger: AATTAGCCACAAATCCTCAAATAGACAGCTACTCAAAGGCATCTTCACGGACAATTTCCAAGCATTGGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS TCA 72 bp	GAACTTGAAATAGGAGTTCACTGGCCCTCAACTTTCTaGGCTTACTATTTCACAAACCTGCCTATTCTTGAA	+
Preference number: 6 (lower is better) Translates to: ELEIGVHWPSTF*AYYFTNLPILE Trigger: TTCAAGAATAGGCAGGTTTGTGAAATAGTAAGCTCAGAAAGTTGAGGGCCAGTGAACTCCTATTTCAAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2
CDS CAA 72 bp	CTTTCTGAGCTTACTATTTCACAAACCTGCCTATTCTaGAATTCTGAGCTGGAGGTCATGATTCTCTCTTAT	+
Preference number: 6 (lower is better) Translates to: LSELTISQTCLF*NSELEVMILSY Trigger: ATAAGAGAGAATCATGACCTCCAGCTCAGAATTCAAGAATAGGCAGGTTTGTGAAATAGTAAGCTCAGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366259.2