Pregenerated sensors for LINC00437 (Homo sapiens)

Ensembl gene IDs: ENSG00000236354

Ensembl transcript IDs: ENST00000414161.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCAATATATTTCTATTCACATTCCATAGGCCAGATCTCAGTCACGTaGCCATATCTTCCTGCAAGGCAGGCCAAGAATGAAGTCTTCATT	+
Preference number: 5 (lower is better) Translates to: AIYFYSHSIGQISVT*PYLPARQAKNEVFI Trigger: AATGAAGACTTCATTCTTGGCCTGCCTTGCAGGAAGATATGGCCACGTGACTGAGATCTGGCCTATGGAATGTGAATAGAAATATATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414161.1
CDS TCA 90 bp	ATGGAGTTTCAGCAGCCGATCCAAGTTCCAAGAAACTGGATAAAATaGTCAGAAGAAGAAGAAAGGGGGAGGTGCAATATATTTCTATTC	+
Preference number: 5 (lower is better) Translates to: MEFQQPIQVPRNWIK*SEEEERGRCNIFLF Trigger: GAATAGAAATATATTGCACCTCCCCCTTTCTTCTTCTTCTGATCATTTTATCCAGTTTCTTGGAACTTGGATCGGCTGCTGAAACTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414161.1
CDS CCA 72 bp	TTCTATTCACATTCCATAGGCCAGATCTCAGTCACGTaGCCATATCTTCCTGCAAGGCAGGCCAAGAATGAA	+
Preference number: 6 (lower is better) Translates to: FYSHSIGQISVT*PYLPARQAKNE Trigger: TTCATTCTTGGCCTGCCTTGCAGGAAGATATGGCCACGTGACTGAGATCTGGCCTATGGAATGTGAATAGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414161.1
CDS TCA 72 bp	TTCCTGCAAGGCAGGCCAAGAATGAAGTCTTCATTTTaGGTGGCCATGTGCCCAGCTAAACATCTTGTTACT	+
Preference number: 6 (lower is better) Translates to: FLQGRPRMKSSF*VAMCPAKHLVT Trigger: AGTAACAAGATGTTTAGCTGGGCACATGGCCACTCAAAATGAAGACTTCATTCTTGGCCTGCCTTGCAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414161.1

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