Pregenerated sensors for LINC00426 (Homo sapiens)
Ensembl gene IDs: ENSG00000238121Ensembl transcript IDs: ENST00000416261.2, ENST00000417079.5, ENST00000420210.6, ENST00000420219.5, ENST00000429808.5, ENST00000444319.1, ENST00000447147.5, ENST00000450327.5, ENST00000452659.5, ENST00000654979.1, ENST00000655621.1, ENST00000657545.1
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CACAGGGAGCCTATGGCCGGGGCCTGCCACTTAGCTGGAAGCTTCTaGAGGCAGGATGACTCAGTGGAGCAGGCCCTGATGCAAGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: HREPMAGACHLAGSF*RQDDSVEQALMQEE Trigger: TTCCTCTTGCATCAGGGCCTGCTCCACTGAGTCATCCTGCCTTCAGAAGCTTCCAGCTAAGTGGCAGGCCCCGGCCATAGGCTCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS CCA 90 bp | AGGCATCAGGTGTCCGTGGTTTACCCTTCTGATGGCAGGGCTGCCTaGGTGCTTTGGCTCACAGCCATGCCCAGCATCAGGAGAGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: RHQVSVVYPSDGRAA*VLWLTAMPSIRRVS Trigger: TGACACTCTCCTGATGCTGGGCATGGCTGTGAGCCAAAGCACCCAGGCAGCCCTGCCATCAGAAGGGTAAACCACGGACACCTGATGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CCA 90 bp | CCCATTTGCTGTGTCCTGACCTCCAGCTTCCTCCCCACGGCCAGTTaGTTAGAACGTGTAGGGAGTGTACCTCTCCCAGCCGTGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: PICCVLTSSFLPTAS*LERVGSVPLPAVES Trigger: GGATTCCACGGCTGGGAGAGGTACACTCCCTACACGTTCTAACCAACTGGCCGTGGGGAGGAAGCTGGAGGTCAGGACACAGCAAATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444319.1 ENST00000447147.5 |
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| CDS TCA 90 bp | ATGGCCGAGTGTGGTCTGACCACACTTGATCCAAAGCCCTTCCTCTaGGCTCTCAGCTCCACGTCACAACCTCGTGACCACGTGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: MAECGLTTLDPKPFL*ALSSTSQPRDHVPL Trigger: GAGAGGCACGTGGTCACGAGGTTGTGACGTGGAGCTGAGAGCTCAGAGGAAGGGCTTTGGATCAAGTGTGGTCAGACCACACTCGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS TCA 90 bp | TGGGGATGCTACAACGACAGGGTCATCAATTTCTCTCTCTTCTGCTaGGGCTGGAGAACCACGGGTAGAAGGCGCTGGAGCATCAACGCT | + |
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Preference number: 5 (lower is better) Translates to: WGCYNDRVINFSLFC*GWRTTGRRRWSINA Trigger: AGCGTTGATGCTCCAGCGCCTTCTACCCGTGGTTCTCCAGCCTCAGCAGAAGAGAGAGAAATTGATGACCCTGTCGTTGTAGCATCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS TCA 90 bp | GTTCAAAGACAGCATGGCCGAATTGTGACCATCCACCCAGTCACATaGGGCAAAAACCCAGGCCCTACCTGTGTCCTGACCTCCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VQRQHGRIVTIHPVT*GKNPGPTCVLTSSF Trigger: GAAGCTGGAGGTCAGGACACAGGTAGGGCCTGGGTTTTTGCCTCATGTGACTGGGTGGATGGTCACAATTCGGCCATGCTGTCTTTGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS GCA 90 bp | GAAAGGGACAGTGACATCTCACTTCCCAGTAGACCCCTGATAAGCTaGAGAACTGCAGGCCCCTTCTGGAATGGAGCTAAGGGCGATGAG | + |
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Preference number: 5 (lower is better) Translates to: ERDSDISLPSRPLIS*RTAGPFWNGAKGDE Trigger: CTCATCGCCCTTAGCTCCATTCCAGAAGGGGCCTGCAGTTCTGCAGCTTATCAGGGGTCTACTGGGAAGTGAGATGTCACTGTCCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS GCA 90 bp | GGCCAAGGCTTTCTCTCACCATCTCTCATGGTACATGGGCCTCAGTaGACTGAGTACACCCTCATTTTGCTGCAGCCCAGCCCATGGTTT | + |
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Preference number: 5 (lower is better) Translates to: GQGFLSPSLMVHGPQ*TEYTLILLQPSPWF Trigger: AAACCATGGGCTGGGCTGCAGCAAAATGAGGGTGTACTCAGTGCACTGAGGCCCATGTACCATGAGAGATGGTGAGAGAAAGCCTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429808.5 |
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| CDS CCA 90 bp | CAATCTCTAACCTCAGGGGCAGTCAGCAGCATCAGCACAGCTTCCTaGTTCAGCAGCTTTCCGGCCTGCAGCACAGGCAATGTGGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: QSLTSGAVSSISTAS*FSSFPACSTGNVVF Trigger: AAAAACCACATTGCCTGTGCTGCAGGCCGGAAAGCTGCTGAACCAGGAAGCTGTGCTGATGCTGCTGACTGCCCCTGAGGTTAGAGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420219.5 |
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| CDS CCA 90 bp | GCCATCCTTTTCCATTTTCATCAACGTGACTGTGTTGGGTCAGGCTaGCAGCAGGGCTCCTTGCTCTGCCGGCATTTACAGCACCACACT | + |
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Preference number: 5 (lower is better) Translates to: AILFHFHQRDCVGSG*QQGSLLCRHLQHHT Trigger: AGTGTGGTGCTGTAAATGCCGGCAGAGCAAGGAGCCCTGCTGCCAGCCTGACCCAACACAGTCACGTTGATGAAAATGGAAAAGGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS TCA 90 bp | AGGCTTTCTCTCACCATCTCTCATGGTACATGGGCCTCAGTGCACTaGGTACACCCTCATTTTGCTGCAGCCCAGCCCATGGTTTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: RLSLTISHGTWASVH*VHPHFAAAQPMVLG Trigger: ACCCAAAACCATGGGCTGGGCTGCAGCAAAATGAGGGTGTACTCAGTGCACTGAGGCCCATGTACCATGAGAGATGGTGAGAGAAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429808.5 |
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| CDS GCA 90 bp | AGCTCCACGTCACAACCTCGTGACCACGTGCCTCTCACTGTCATGTaGTTAGATATGTGTGTGTGTGTCCACCTCACCACACACTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSTSQPRDHVPLTVM*LDMCVCVHLTTHCE Trigger: CTCACAGTGTGTGGTGAGGTGGACACACACACACATATCTAAGCACATGACAGTGAGAGGCACGTGGTCACGAGGTTGTGACGTGGAGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS GCA 90 bp | AAACAAAAACAGGCAGCAGGCCAGTCCTGGCCACTGGCCATACTTTaGCAACTCTTAATCCAGGAGAGCCACTCACAGACAATGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: KQKQAAGQSWPLAIL*QLLIQESHSQTMQG Trigger: GCCCTGCATTGTCTGTGAGTGGCTCTCCTGGATTAAGAGTTGGCAAAGTATGGCCAGTGGCCAGGACTGGCCTGCTGCCTGTTTTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS CCA 90 bp | CTTCCCAGTAGACCCCTGATAAGCTGCAGAACTGCAGGCCCCTTCTaGAATGGAGCTAAGGGCGATGAGAACATTGTGTGTTCTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LPSRPLISCRTAGPF*NGAKGDENIVCSLE Trigger: CTCCAGAGAACACACAATGTTCTCATCGCCCTTAGCTCCATTCCAGAAGGGGCCTGCAGTTCTGCAGCTTATCAGGGGTCTACTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS CCA 90 bp | CAGCTTCCTGGTTCAGCAGCTTTCCGGCCTGCAGCACAGGCAATGTaGTTTTTGAGTTCACAGTGGAAGCAGCAGATACAGCAGCTACCT | + |
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Preference number: 5 (lower is better) Translates to: QLPGSAAFRPAAQAM*FLSSQWKQQIQQLP Trigger: AGGTAGCTGCTGTATCTGCTGCTTCCACTGTGAACTCAAAAACCACATTGCCTGTGCTGCAGGCCGGAAAGCTGCTGAACCAGGAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420219.5 |
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| CDS TCA 90 bp | CTGGTTCAGCAGCTTTCCGGCCTGCAGCACAGGCAATGTGGTTTTTaGGTTCACAGTGGAAGCAGCAGATACAGCAGCTACCTGACTAAG | + |
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Preference number: 5 (lower is better) Translates to: LVQQLSGLQHRQCGF*VHSGSSRYSSYLTK Trigger: CTTAGTCAGGTAGCTGCTGTATCTGCTGCTTCCACTGTGAACTCAAAAACCACATTGCCTGTGCTGCAGGCCGGAAAGCTGCTGAACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420219.5 |
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| CDS CCA 90 bp | ATTCTTAGCTCACGGGTTAAACAAAAACAGGCAGCAGGCCAGTCCTaGCCACTGGCCATACTTTGCCAACTCTTAATCCAGGAGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: ILSSRVKQKQAAGQS*PLAILCQLLIQESH Trigger: GTGGCTCTCCTGGATTAAGAGTTGGCAAAGTATGGCCAGTGGCCAGGACTGGCCTGCTGCCTGTTTTTGTTTAACCCGTGAGCTAAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS CCA 90 bp | GCTGTAACTGAGGAGGTAAGGGGCGAGTCCTTGTCACACATTTCTTaGAGGTCAGGTCAATCCACCTGTGAGCCCAAAATTATGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: AVTEEVRGESLSHIS*RSGQSTCEPKIMLA Trigger: TGCCAGCATAATTTTGGGCTCACAGGTGGATTGACCTGACCTCCAAGAAATGTGTGACAAGGACTCGCCCCTTACCTCCTCAGTTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS GCA 90 bp | CAGCATCAGGAGAGTGTCATACAGCATATCCCTTGCCCAGGTAGATaGTCTAGTGCATGGTATAGCCTGAGCATTTTAAGTGGCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: QHQESVIQHIPCPGR*SSAWYSLSILSGHH Trigger: GTGGTGGCCACTTAAAATGCTCAGGCTATACCATGCACTAGAGCATCTACCTGGGCAAGGGATATGCTGTATGACACTCTCCTGATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS GCA 90 bp | CACAGCCATGCCCAGCATCAGGAGAGTGTCATACAGCATATCCCTTaGCCAGGTAGATGCTCTAGTGCATGGTATAGCCTGAGCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: HSHAQHQESVIQHIP*PGRCSSAWYSLSIL Trigger: TAAAATGCTCAGGCTATACCATGCACTAGAGCATCTACCTGGGCAAGGGATATGCTGTATGACACTCTCCTGATGCTGGGCATGGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS TCA 90 bp | TATGATTTTGGTGGTGTTGAGTTCAAAGACAGCATGGCCGAATTGTaGCCATCCACCCAGTCACATGAGGCAAAAACCCAGGCCCTACCT | + |
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Preference number: 5 (lower is better) Translates to: YDFGGVEFKDSMAEL*PSTQSHEAKTQALP Trigger: AGGTAGGGCCTGGGTTTTTGCCTCATGTGACTGGGTGGATGGTCACAATTCGGCCATGCTGTCTTTGAACTCAACACCACCAAAATCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS TCA 90 bp | TGCTTTCCCTACAAATTGGACAAGAGTTTCTTCTTGGCTTCCATATaGCATCAGGTCTTTCTTGTGATCGCGGCTACTCGGGAGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: CFPYKLDKSFFLASI*HQVFLVIAATREAE Trigger: CTCAGCCTCCCGAGTAGCCGCGATCACAAGAAAGACCTGATGTCATATGGAAGCCAAGAAGAAACTCTTGTCCAATTTGTAGGGAAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS TCA 90 bp | ATCTGCTCCAGGAGGCGGCTTGGTGTTGATTTGACAGCTGGATGCTaGGTATTGATCCCAGTGTTCAGGGATAGTTACTTCATTAAGACT | + |
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Preference number: 5 (lower is better) Translates to: ICSRRRLGVDLTAGC*VLIPVFRDSYFIKT Trigger: AGTCTTAATGAAGTAACTATCCCTGAACACTGGGATCAATACTCAGCATCCAGCTGTCAAATCAACACCAAGCCGCCTCCTGGAGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000420219.5 ENST00000450327.5 ENST00000654979.1 |
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| CDS TCA 90 bp | TGGGCGACGAGTGAAACGCTTGGTGTTGATTTGACAGCTGGATGCTaGGTATTGATCCCAGTGTTCAGGGATAGTTACTTCATTAAGACT | + |
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Preference number: 5 (lower is better) Translates to: WATSETLGVDLTAGC*VLIPVFRDSYFIKT Trigger: AGTCTTAATGAAGTAACTATCCCTGAACACTGGGATCAATACTCAGCATCCAGCTGTCAAATCAACACCAAGCGTTTCACTCGTCGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000447147.5 ENST00000452659.5 |
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| CDS TCA 90 bp | AAATTCTCTTTTGTGGACTTTTCATGCCCATCAGGCAGCGTAATCTaGCAATGGAGAACTTTGCAACTGAAGGCCTGTAATCCCAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: KFSFVDFSCPSGSVI*QWRTLQLKACNPSY Trigger: GTAGCTGGGATTACAGGCCTTCAGTTGCAAAGTTCTCCATTGTCAGATTACGCTGCCTGATGGGCATGAAAAGTCCACAAAAGAGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420210.6 |
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| CDS TCA 90 bp | CTCCCAATCTCGTCTTCATTTCCTGTCCCAACACATCCTTGCTCTTaGCATTCTGCTCTGGGTTTTCTTTTCTGCTCCACACATTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LPISSSFPVPTHPCS*HSALGFLFCSTHFF Trigger: AAAGAAATGTGTGGAGCAGAAAAGAAAACCCAGAGCAGAATGTCAAGAGCAAGGATGTGTTGGGACAGGAAATGAAGACGAGATTGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS TCA 90 bp | AAATTCTCTTTTGTGGACTTTTCATGCCCATCAGGCAGCGTAATCTaGCAATGGAGAACTTTGCAACTGAAGGCCTCCAGCCATCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: KFSFVDFSCPSGSVI*QWRTLQLKASSHPF Trigger: AAAAGGATGGCTGGAGGCCTTCAGTTGCAAAGTTCTCCATTGTCAGATTACGCTGCCTGATGGGCATGAAAAGTCCACAAAAGAGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS GCA 90 bp | GTCTCCTCCATCTTCCTAATTCCAAGATACGAGAGGAAACAGATGTaGGTTGGGGAGAGTAATGAGAAAGAGCAACTCTGCTTTCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: VSSIFLIPRYERKQM*VGESNEKEQLCFPF Trigger: AAAAGGAAAGCAGAGTTGCTCTTTCTCATTACTCTCCCCAACGCACATCTGTTTCCTCTCGTATCTTGGAATTAGGAAGATGGAGGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS TCA 90 bp | CTCCAGTTAGGTATAGACCTTGGTGTTGATTTGACAGCTGGATGCTaGGTATTGATCCCAGTGTTCAGGGATAGTTACTTCATTAAGACT | + |
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Preference number: 5 (lower is better) Translates to: LQLGIDLGVDLTAGC*VLIPVFRDSYFIKT Trigger: AGTCTTAATGAAGTAACTATCCCTGAACACTGGGATCAATACTCAGCATCCAGCTGTCAAATCAACACCAAGGTCTATACCTAACTGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444319.1 |
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| CDS TCA 90 bp | CCACCTGTGAGCCCAAAATTATGCTGGCAGAAGGAAGAAGCGAGATaGTTTTTAATTGTTATGAAGTGTGCTGGTAACTTAAGTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PPVSPKLCWQKEEAR*FLIVMKCAGNLSCS Trigger: AGAACAACTTAAGTTACCAGCACACTTCATAACAATTAAAAATCATCTCGCTTCTTCCTTCTGCCAGCATAATTTTGGGCTCACAGGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS GCA 72 bp | CACCACAGTGCCCCTCTGGAAGCACAGAGGTGGAGGTaGTTCGGACCTTCTCCAGCAGGGATGACAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HHSAPLEAQRWR*FGPSPAGMTVA Trigger: TGCCACTGTCATCCCTGCTGGAGAAGGTCCGAAGCACCTCCACCTCTGTGCTTCCAGAGGGGCACTGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS GCA 72 bp | CCGTGGTTTACCCTTCTGATGGCAGGGCTGCCTGGGTaGTTTGGCTCACAGCCATGCCCAGCATCAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PWFTLLMAGLPG*FGSQPCPASGE Trigger: CTCTCCTGATGCTGGGCATGGCTGTGAGCCAAAGCACCCAGGCAGCCCTGCCATCAGAAGGGTAAACCACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CCA 72 bp | GTGTCCGTGGTTTACCCTTCTGATGGCAGGGCTGCCTaGGTGCTTTGGCTCACAGCCATGCCCAGCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: VSVVYPSDGRAA*VLWLTAMPSIR Trigger: CCTGATGCTGGGCATGGCTGTGAGCCAAAGCACCCAGGCAGCCCTGCCATCAGAAGGGTAAACCACGGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CCA 72 bp | TGTGTCCTGACCTCCAGCTTCCTCCCCACGGCCAGTTaGTTAGAACGTGTAGGGAGTGTACCTCTCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CVLTSSFLPTAS*LERVGSVPLPA Trigger: GGCTGGGAGAGGTACACTCCCTACACGTTCTAACCAACTGGCCGTGGGGAGGAAGCTGGAGGTCAGGACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000444319.1 ENST00000447147.5 |
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| CDS CCA 72 bp | ACCTCAGGGGCAGTCAGCAGCATCAGCACAGCTTCCTaGTTCAGCAGCTTTCCGGCCTGCAGCACAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: TSGAVSSISTAS*FSSFPACSTGN Trigger: ATTGCCTGTGCTGCAGGCCGGAAAGCTGCTGAACCAGGAAGCTGTGCTGATGCTGCTGACTGCCCCTGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420219.5 |
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| CDS CAA 72 bp | CTGTGTCCTGACCTCCAGCTTCCTCCCCACGGCCAGTaGGTTAGAACGTGTAGGGAGTGTACCTCTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LCPDLQLPPHGQ*VRTCRECTSPS Trigger: GCTGGGAGAGGTACACTCCCTACACGTTCTAACCAACTGGCCGTGGGGAGGAAGCTGGAGGTCAGGACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000444319.1 ENST00000447147.5 |
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| CDS CAA 90 bp | CCCCATTTGCTGTGTCCTGACCTCCAGCTTCCTCCCCACGGCCAGTaGGTTAGAACGTGTAGGGAGTGTACCTCTCCCAGCCGTGGAATC | + |
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Preference number: 6 (lower is better) Translates to: PHLLCPDLQLPPHGQ*VRTCRECTSPSRGI Trigger: GATTCCACGGCTGGGAGAGGTACACTCCCTACACGTTCTAACCAACTGGCCGTGGGGAGGAAGCTGGAGGTCAGGACACAGCAAATGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000444319.1 ENST00000447147.5 |
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| CDS TCA 72 bp | TTCAGGAAGGCATCAGGTGTCCGTGGTTTACCCTTCTaGTGGCAGGGCTGCCTGGGTGCTTTGGCTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: FRKASGVRGLPF*WQGCLGALAHS Trigger: GCTGTGAGCCAAAGCACCCAGGCAGCCCTGCCATCAGAAGGGTAAACCACGGACACCTGATGCCTTCCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS GCA 72 bp | ATGGCAGGGCTGCCTGGGTGCTTTGGCTCACAGCCATaGCCAGCATCAGGAGAGTGTCATACAGCATATCCC | + |
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Preference number: 6 (lower is better) Translates to: MAGLPGCFGSQP*PASGECHTAYP Trigger: GGGATATGCTGTATGACACTCTCCTGATGCTGGGCATGGCTGTGAGCCAAAGCACCCAGGCAGCCCTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CCA 72 bp | GTTTACCCTTCTGATGGCAGGGCTGCCTGGGTGCTTTaGCTCACAGCCATGCCCAGCATCAGGAGAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: VYPSDGRAAWVL*LTAMPSIRRVS Trigger: TGACACTCTCCTGATGCTGGGCATGGCTGTGAGCCAAAGCACCCAGGCAGCCCTGCCATCAGAAGGGTAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CCA 72 bp | GTAGTGCTCTTCCTTCAGGAAGGCATCAGGTGTCCGTaGTTTACCCTTCTGATGGCAGGGCTGCCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VVLFLQEGIRCP*FTLLMAGLPGC Trigger: GCACCCAGGCAGCCCTGCCATCAGAAGGGTAAACCACGGACACCTGATGCCTTCCTGAAGGAAGAGCACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CAA 90 bp | TCTCTCATGGTACATGGGCCTCAGTGCACTGAGTACACCCTCATTTaGCTGCAGCCCAGCCCATGGTTTTGGGTCTGGAGGGGACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SLMVHGPQCTEYTLI*LQPSPWFWVWRGQE Trigger: CTCCTGTCCCCTCCAGACCCAAAACCATGGGCTGGGCTGCAGCAAAATGAGGGTGTACTCAGTGCACTGAGGCCCATGTACCATGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000420219.5 ENST00000429808.5 ENST00000450327.5 |
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| CDS GCA 72 bp | CAGGCAGCAGGCCAGTCCTGGCCACTGGCCATACTTTaGCAACTCTTAATCCAGGAGAGCCACTCACAGACA | + |
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Preference number: 6 (lower is better) Translates to: QAAGQSWPLAIL*QLLIQESHSQT Trigger: TGTCTGTGAGTGGCTCTCCTGGATTAAGAGTTGGCAAAGTATGGCCAGTGGCCAGGACTGGCCTGCTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS GCA 72 bp | TACATGGGCCTCAGTGCACTGAGTACACCCTCATTTTaGTGCAGCCCAGCCCATGGTTTTGGGTCTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: YMGLSALSTPSF*CSPAHGFGSGG Trigger: CCCTCCAGACCCAAAACCATGGGCTGGGCTGCAGCAAAATGAGGGTGTACTCAGTGCACTGAGGCCCATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000420219.5 ENST00000429808.5 ENST00000450327.5 |
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| CDS CAA 72 bp | CGGGTAGAAGGCGCTGGAGCATCAACGCTTGATGGTTaGGCAGGCGTAGTGCTCTTCCTTCAGGAAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: RVEGAGASTLDG*AGVVLFLQEGI Trigger: GATGCCTTCCTGAAGGAAGAGCACTACGCCTGCCAAACCATCAAGCGTTGATGCTCCAGCGCCTTCTACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CAA 72 bp | ACAGGCAGCAGGCCAGTCCTGGCCACTGGCCATACTTaGCCAACTCTTAATCCAGGAGAGCCACTCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: TGSRPVLATGHT*PTLNPGEPLTD Trigger: GTCTGTGAGTGGCTCTCCTGGATTAAGAGTTGGCAAAGTATGGCCAGTGGCCAGGACTGGCCTGCTGCCTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS CAA 72 bp | GTACATGGGCCTCAGTGCACTGAGTACACCCTCATTTaGCTGCAGCCCAGCCCATGGTTTTGGGTCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VHGPQCTEYTLI*LQPSPWFWVWR Trigger: CCTCCAGACCCAAAACCATGGGCTGGGCTGCAGCAAAATGAGGGTGTACTCAGTGCACTGAGGCCCATGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000420219.5 ENST00000429808.5 ENST00000450327.5 |
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| CDS CAA 90 bp | ACCTATGGGTGTATGTTTTTGGCAATGTGGCTAAGTCAGGCAGCATaGAGGACTGTCCTGGTGACAGTCCGGTGCAGCCCTCACCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: TYGCMFLAMWLSQAA*RTVLVTVRCSPHPG Trigger: GCCTGGGTGAGGGCTGCACCGGACTGTCACCAGGACAGTCCTCAATGCTGCCTGACTTAGCCACATTGCCAAAAACATACACCCATAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS TCA 72 bp | TGTGGTCTGACCACACTTGATCCAAAGCCCTTCCTCTaGGCTCTCAGCTCCACGTCACAACCTCGTGACCAC | + |
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Preference number: 6 (lower is better) Translates to: CGLTTLDPKPFL*ALSSTSQPRDH Trigger: GTGGTCACGAGGTTGTGACGTGGAGCTGAGAGCTCAGAGGAAGGGCTTTGGATCAAGTGTGGTCAGACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS CAA 72 bp | AGGGGTAGTCAGAGTTGGGAGCTTGTCCCTGTCTTCTaGGCCGAGATTCCTCTGAGACAAGTGGTGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RGSQSWELVPVF*AEIPLRQVVRQ Trigger: CTGCCTCACCACTTGTCTCAGAGGAATCTCGGCCAAGAAGACAGGGACAAGCTCCCAACTCTGACTACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447147.5 |
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| CDS TCA 72 bp | AAAGACTTTCATGGCCGAGTGTGGTCTGACCACACTTaGTCCAAAGCCCTTCCTCTGAGCTCTCAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: KDFHGRVWSDHT*SKALPLSSQLH Trigger: GTGGAGCTGAGAGCTCAGAGGAAGGGCTTTGGATCAAGTGTGGTCAGACCACACTCGGCCATGAAAGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS TCA 72 bp | GCTTCTGAAGGCAGGATGACTCAGTGGAGCAGGCCCTaGTGCAAGAGGAACAGGACTCATTTGCACTCAACT | + |
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Preference number: 6 (lower is better) Translates to: ASEGRMTQWSRP*CKRNRTHLHST Trigger: AGTTGAGTGCAAATGAGTCCTGTTCCTCTTGCATCAGGGCCTGCTCCACTGAGTCATCCTGCCTTCAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS TCA 72 bp | CAGCTTTCCGGCCTGCAGCACAGGCAATGTGGTTTTTaGGTTCACAGTGGAAGCAGCAGATACAGCAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: QLSGLQHRQCGF*VHSGSSRYSSY Trigger: GTAGCTGCTGTATCTGCTGCTTCCACTGTGAACTCAAAAACCACATTGCCTGTGCTGCAGGCCGGAAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420219.5 |
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| CDS GCA 72 bp | GCCCAGCATCAGGAGAGTGTCATACAGCATATCCCTTaGCCAGGTAGATGCTCTAGTGCATGGTATAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: AQHQESVIQHIP*PGRCSSAWYSL Trigger: CAGGCTATACCATGCACTAGAGCATCTACCTGGGCAAGGGATATGCTGTATGACACTCTCCTGATGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS GCA 72 bp | ATCAGCACAGCTTCCTGGTTCAGCAGCTTTCCGGCCTaGAGCACAGGCAATGTGGTTTTTGAGTTCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: ISTASWFSSFPA*STGNVVFEFTV Trigger: CACTGTGAACTCAAAAACCACATTGCCTGTGCTGCAGGCCGGAAAGCTGCTGAACCAGGAAGCTGTGCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420219.5 |
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| CDS GCA 72 bp | TTTCTCTCACCATCTCTCATGGTACATGGGCCTCAGTaGACTGAGTACACCCTCATTTTGCTGCAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FLSPSLMVHGPQ*TEYTLILLQPS Trigger: GCTGGGCTGCAGCAAAATGAGGGTGTACTCAGTGCACTGAGGCCCATGTACCATGAGAGATGGTGAGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429808.5 |
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| CDS CCA 72 bp | AGACCCCTGATAAGCTGCAGAACTGCAGGCCCCTTCTaGAATGGAGCTAAGGGCGATGAGAACATTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RPLISCRTAGPF*NGAKGDENIVC Trigger: ACACACAATGTTCTCATCGCCCTTAGCTCCATTCCAGAAGGGGCCTGCAGTTCTGCAGCTTATCAGGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS CCA 72 bp | GGTTCAGCAGCTTTCCGGCCTGCAGCACAGGCAATGTaGTTTTTGAGTTCACAGTGGAAGCAGCAGATACAG | + |
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Preference number: 6 (lower is better) Translates to: GSAAFRPAAQAM*FLSSQWKQQIQ Trigger: CTGTATCTGCTGCTTCCACTGTGAACTCAAAAACCACATTGCCTGTGCTGCAGGCCGGAAAGCTGCTGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420219.5 |
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| CDS CAA 72 bp | TGTATGTTTTTGGCAATGTGGCTAAGTCAGGCAGCATaGAGGACTGTCCTGGTGACAGTCCGGTGCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: CMFLAMWLSQAA*RTVLVTVRCSP Trigger: AGGGCTGCACCGGACTGTCACCAGGACAGTCCTCAATGCTGCCTGACTTAGCCACATTGCCAAAAACATACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS CAA 72 bp | GCAGCTTTCCGGCCTGCAGCACAGGCAATGTGGTTTTaGAGTTCACAGTGGAAGCAGCAGATACAGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: AAFRPAAQAMWF*SSQWKQQIQQL Trigger: TAGCTGCTGTATCTGCTGCTTCCACTGTGAACTCAAAAACCACATTGCCTGTGCTGCAGGCCGGAAAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420219.5 |
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| CDS CAA 90 bp | AGGGCTCCTTGCTCTGCCGGCATTTACAGCACCACACTGTTCTCTTaGGCCACCTTAATTAGCACTCTCTCATCATGTGCCTTTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RAPCSAGIYSTTLFS*ATLISTLSSCAFAP Trigger: AGGAGCAAAGGCACATGATGAGAGAGTGCTAATTAAGGTGGCCAAAGAGAACAGTGTGGTGCTGTAAATGCCGGCAGAGCAAGGAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS CAA 90 bp | ATAAACACCAAACGTGCTGTAACTGAGGAGGTAAGGGGCGAGTCCTaGTCACACATTTCTTGGAGGTCAGGTCAATCCACCTGTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: INTKRAVTEEVRGES*SHISWRSGQSTCEP Trigger: GGGCTCACAGGTGGATTGACCTGACCTCCAAGAAATGTGTGACAAGGACTCGCCCCTTACCTCCTCAGTTACAGCACGTTTGGTGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS TCA 72 bp | GGTGGTGTTGAGTTCAAAGACAGCATGGCCGAATTGTaGCCATCCACCCAGTCACATGAGGCAAAAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: GGVEFKDSMAEL*PSTQSHEAKTQ Trigger: CTGGGTTTTTGCCTCATGTGACTGGGTGGATGGTCACAATTCGGCCATGCTGTCTTTGAACTCAACACCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS CCA 72 bp | GAGGAGGTAAGGGGCGAGTCCTTGTCACACATTTCTTaGAGGTCAGGTCAATCCACCTGTGAGCCCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: EEVRGESLSHIS*RSGQSTCEPKI Trigger: AATTTTGGGCTCACAGGTGGATTGACCTGACCTCCAAGAAATGTGTGACAAGGACTCGCCCCTTACCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS CAA 72 bp | AAACGTGCTGTAACTGAGGAGGTAAGGGGCGAGTCCTaGTCACACATTTCTTGGAGGTCAGGTCAATCCACC | + |
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Preference number: 6 (lower is better) Translates to: KRAVTEEVRGES*SHISWRSGQST Trigger: GGTGGATTGACCTGACCTCCAAGAAATGTGTGACAAGGACTCGCCCCTTACCTCCTCAGTTACAGCACGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS GCA 72 bp | GCCATCTGTTTTGGGAGTTTTAAAGTGAGCCCAGCATaGATCAGGAGGCTAGGTGGGTCACCACTTAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: AICFGSFKVSPA*IRRLGGSPLKS Trigger: AGACTTAAGTGGTGACCCACCTAGCCTCCTGATGCATGCTGGGCTCACTTTAAAACTCCCAAAACAGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS CCA 72 bp | CAGCATATCCCTTGCCCAGGTAGATGCTCTAGTGCATaGTATAGCCTGAGCATTTTAAGTGGCCACCACAGT | + |
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Preference number: 6 (lower is better) Translates to: QHIPCPGRCSSA*YSLSILSGHHS Trigger: ACTGTGGTGGCCACTTAAAATGCTCAGGCTATACCATGCACTAGAGCATCTACCTGGGCAAGGGATATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CAA 72 bp | TGCTCTGCCGGCATTTACAGCACCACACTGTTCTCTTaGGCCACCTTAATTAGCACTCTCTCATCATGTGCC | + |
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Preference number: 6 (lower is better) Translates to: CSAGIYSTTLFS*ATLISTLSSCA Trigger: GGCACATGATGAGAGAGTGCTAATTAAGGTGGCCAAAGAGAACAGTGTGGTGCTGTAAATGCCGGCAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS TCA 72 bp | AGGAGGCGGCTTGGTGTTGATTTGACAGCTGGATGCTaGGTATTGATCCCAGTGTTCAGGGATAGTTACTTC | + |
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Preference number: 6 (lower is better) Translates to: RRRLGVDLTAGC*VLIPVFRDSYF Trigger: GAAGTAACTATCCCTGAACACTGGGATCAATACTCAGCATCCAGCTGTCAAATCAACACCAAGCCGCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000420219.5 ENST00000450327.5 ENST00000654979.1 |
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| CDS TCA 72 bp | TTTGTGGACTTTTCATGCCCATCAGGCAGCGTAATCTaGCAATGGAGAACTTTGCAACTGAAGGCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FVDFSCPSGSVI*QWRTLQLKASS Trigger: GCTGGAGGCCTTCAGTTGCAAAGTTCTCCATTGTCAGATTACGCTGCCTGATGGGCATGAAAAGTCCACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS TCA 72 bp | GTCACACATTTCTTGGAGGTCAGGTCAATCCACCTGTaGGCCCAAAATTATGCTGGCAGAAGGAAGAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: VTHFLEVRSIHL*AQNYAGRRKKR Trigger: TCGCTTCTTCCTTCTGCCAGCATAATTTTGGGCTCACAGGTGGATTGACCTGACCTCCAAGAAATGTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS CCA 72 bp | CCTATGATTTTGGTGGTGTTGAGTTCAAAGACAGCATaGCCGAATTGTGACCATCCACCCAGTCACATGAGG | + |
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Preference number: 6 (lower is better) Translates to: PMILVVLSSKTA*PNCDHPPSHMR Trigger: CCTCATGTGACTGGGTGGATGGTCACAATTCGGCCATGCTGTCTTTGAACTCAACACCACCAAAATCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416261.2 |
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| CDS CCA 72 bp | GGGGTAGTCAGAGTTGGGAGCTTGTCCCTGTCTTCTTaGCCGAGATTCCTAGAGGAAACACAAATAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: GVVRVGSLSLSS*PRFLEETQIDF Trigger: AAAGTCTATTTGTGTTTCCTCTAGGAATCTCGGCCAAGAAGACAGGGACAAGCTCCCAACTCTGACTACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000420210.6 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS CAA 72 bp | AGGGGTAGTCAGAGTTGGGAGCTTGTCCCTGTCTTCTaGGCCGAGATTCCTAGAGGAAACACAAATAGACTT | + |
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Preference number: 6 (lower is better) Translates to: RGSQSWELVPVF*AEIPRGNTNRL Trigger: AAGTCTATTTGTGTTTCCTCTAGGAATCTCGGCCAAGAAGACAGGGACAAGCTCCCAACTCTGACTACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000420210.6 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS GCA 72 bp | GAGAGTGTCATACAGCATATCCCTTGCCCAGGTAGATaGTCTAGTGCATGGTATAGCCTGAGCATTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: ESVIQHIPCPGR*SSAWYSLSILS Trigger: ACTTAAAATGCTCAGGCTATACCATGCACTAGAGCATCTACCTGGGCAAGGGATATGCTGTATGACACTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416261.2 ENST00000420219.5 ENST00000654979.1 |
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| CDS CAA 90 bp | TCTCCCAATCTCGTCTTCATTTCCTGTCCCAACACATCCTTGCTCTaGACATTCTGCTCTGGGTTTTCTTTTCTGCTCCACACATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SPNLVFISCPNTSLL*TFCSGFSFLLHTFL Trigger: AAGAAATGTGTGGAGCAGAAAAGAAAACCCAGAGCAGAATGTCAAGAGCAAGGATGTGTTGGGACAGGAAATGAAGACGAGATTGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS TCA 72 bp | TTTGTGGACTTTTCATGCCCATCAGGCAGCGTAATCTaGCAATGGAGAACTTTGCAACTGAAGGCCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: FVDFSCPSGSVI*QWRTLQLKACN Trigger: ATTACAGGCCTTCAGTTGCAAAGTTCTCCATTGTCAGATTACGCTGCCTGATGGGCATGAAAAGTCCACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420210.6 |
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| CDS TCA 72 bp | TACAAATTGGACAAGAGTTTCTTCTTGGCTTCCATATaGCATCAGGTCTTTCTTGTGATCGCGGCTACTCGG | + |
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Preference number: 6 (lower is better) Translates to: YKLDKSFFLASI*HQVFLVIAATR Trigger: CCGAGTAGCCGCGATCACAAGAAAGACCTGATGTCATATGGAAGCCAAGAAGAAACTCTTGTCCAATTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS TCA 72 bp | GGTATAGACCTTGGTGTTGATTTGACAGCTGGATGCTaGGTATTGATCCCAGTGTTCAGGGATAGTTACTTC | + |
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Preference number: 6 (lower is better) Translates to: GIDLGVDLTAGC*VLIPVFRDSYF Trigger: GAAGTAACTATCCCTGAACACTGGGATCAATACTCAGCATCCAGCTGTCAAATCAACACCAAGGTCTATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444319.1 |
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| CDS TCA 72 bp | AGTGAAACGCTTGGTGTTGATTTGACAGCTGGATGCTaGGTATTGATCCCAGTGTTCAGGGATAGTTACTTC | + |
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Preference number: 6 (lower is better) Translates to: SETLGVDLTAGC*VLIPVFRDSYF Trigger: GAAGTAACTATCCCTGAACACTGGGATCAATACTCAGCATCCAGCTGTCAAATCAACACCAAGCGTTTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000447147.5 ENST00000452659.5 |
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| CDS GCA 72 bp | ATCTTCCTAATTCCAAGATACGAGAGGAAACAGATGTaGGTTGGGGAGAGTAATGAGAAAGAGCAACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: IFLIPRYERKQM*VGESNEKEQLC Trigger: GCAGAGTTGCTCTTTCTCATTACTCTCCCCAACGCACATCTGTTTCCTCTCGTATCTTGGAATTAGGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000420210.6 ENST00000447147.5 ENST00000654979.1 ENST00000655621.1 ENST00000657545.1 |
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| CDS TCA 72 bp | TTGTTCTGTATTTCCATCCTTGTTTTGAAACCAAGCTaGAGCTCTCTCTGTCTCTCTGTCTCTCTGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LFCISILVLKPS*SSLCLSVSLLS Trigger: GGAAAGCAGAGAGACAGAGAGACAGAGAGAGCTTCAGCTTGGTTTCAAAACAAGGATGGAAATACAGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417079.5 |
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| CDS GCA 72 bp | ATCGAGGCTTTTTGTCATTTACAAAGCGCTTTTGCTTaGATGATCGTATTGAGTATAAGCATGGGTATAAGC | + |
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Preference number: 6 (lower is better) Translates to: IEAFCHLQSAFA*MIVLSISMGIS Trigger: GCTTATACCCATGCTTATACTCAATACGATCATGCAAGCAAAAGCGCTTTGTAAATGACAAAAAGCCTCGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657545.1 |
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| CDS GCA 72 bp | GCTTATCGAGGCTTTTTGTCATTTACAAAGCGCTTTTaGTTGCATGATCGTATTGAGTATAAGCATGGGTAT | + |
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Preference number: 6 (lower is better) Translates to: AYRGFLSFTKRF*LHDRIEYKHGY Trigger: ATACCCATGCTTATACTCAATACGATCATGCAAGCAAAAGCGCTTTGTAAATGACAAAAAGCCTCGATAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657545.1 |
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| CDS CAA 72 bp | TGTCATTTACAAAGCGCTTTTGCTTGCATGATCGTATaGAGTATAAGCATGGGTATAAGCACTACTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: CHLQSAFACMIV*SISMGISTTSI Trigger: AATGGAAGTAGTGCTTATACCCATGCTTATACTCAATACGATCATGCAAGCAAAAGCGCTTTGTAAATGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657545.1 |
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