Pregenerated sensors for LINC00421 (Homo sapiens)

Ensembl gene IDs: ENSG00000236834

Ensembl transcript IDs: ENST00000413833.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GAGCTAAATCTGCCATCGTTGCTGGGGGAAATCACTCCAGCACTCTaGCTCAGTTTGCTCATCCATAAAATAGAAACACATCCTTCCCTA	+
Preference number: 5 (lower is better) Translates to: ELNLPSLLGEITPAL*LSLLIHKIETHPSL Trigger: TAGGGAAGGATGTGTTTCTATTTTATGGATGAGCAAACTGAGGCAGAGTGCTGGAGTGATTTCCCCCAGCAACGATGGCAGATTTAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413833.1
CDS CAA 72 bp	TTGCTGGGGGAAATCACTCCAGCACTCTGCCTCAGTTaGCTCATCCATAAAATAGAAACACATCCTTCCCTA	+
Preference number: 6 (lower is better) Translates to: LLGEITPALCLS*LIHKIETHPSL Trigger: TAGGGAAGGATGTGTTTCTATTTTATGGATGAGCAAACTGAGGCAGAGTGCTGGAGTGATTTCCCCCAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413833.1
CDS CAA 72 bp	TTCTGTGGAGAGAAAGCCCATGATACATCATGGTATTaGAGAGGGAGGATCCTAAAATCTAAGCCCTGGAGC	+
Preference number: 6 (lower is better) Translates to: FCGEKAHDTSWY*RGRILKSKPWS Trigger: GCTCCAGGGCTTAGATTTTAGGATCCTCCCTCTCAAATACCATGATGTATCATGGGCTTTCTCTCCACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413833.1

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