Pregenerated sensors for LINC00407 (Homo sapiens)

Ensembl gene IDs: ENSG00000237585

Ensembl transcript IDs: ENST00000426509.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	CATTTGAAACAGGATTCTCAACCTCTTTGTAGGGTAGAAGTCATCTaGCTGGGATCCACCTCACAGGGTGGTGATGGACATGAACACAGC	+
Preference number: 6 (lower is better) Translates to: HLKQDSQPLCRVEVI*LGSTSQGGDGHEHS Trigger: GCTGTGTTCATGTCCATCACCACCCTGTGAGGTGGATCCCAGCAAGATGACTTCTACCCTACAAAGAGGTTGAGAATCCTGTTTCAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426509.1
CDS CAA 90 bp	GTCTCCCTTCTTAAAGTGACAGATTCACAGGGATCCATCCAGCATTaGAAACAGGATTCTCAACCTCTTTGTAGGGTAGAAGTCATCTTG	+
Preference number: 6 (lower is better) Translates to: VSLLKVTDSQGSIQH*KQDSQPLCRVEVIL Trigger: CAAGATGACTTCTACCCTACAAAGAGGTTGAGAATCCTGTTTCAAATGCTGGATGGATCCCTGTGAATCTGTCACTTTAAGAAGGGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426509.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu