Pregenerated sensors for LINC00402 (Homo sapiens)
Ensembl gene IDs: ENSG00000235532Ensembl transcript IDs: ENST00000419499.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCATCCTCGGGCTTTCTCTGGCCACAGAAGCATGCCTGGTCTATCTaGGGCACAGGCCAGAAGTTTGGGGAGGTTAATGCCCTTAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSGFLWPQKHAWSI*GTGQKFGEVNALNQ Trigger: CTGGTTAAGGGCATTAACCTCCCCAAACTTCTGGCCTGTGCCCCAGATAGACCAGGCATGCTTCTGTGGCCAGAGAAAGCCCGAGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | TGTGACTCTCCATCCTCGGGCTTTCTCTGGCCACAGAAGCATGCCTaGTCTATCTGGGGCACAGGCCAGAAGTTTGGGGAGGTTAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: CDSPSSGFLWPQKHA*SIWGTGQKFGEVNA Trigger: GGCATTAACCTCCCCAAACTTCTGGCCTGTGCCCCAGATAGACCAGGCATGCTTCTGTGGCCAGAGAAAGCCCGAGGATGGAGAGTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | CTACCTACCACAAGCATCTGTGACTCTCCATCCTCGGGCTTTCTCTaGCCACAGAAGCATGCCTGGTCTATCTGGGGCACAGGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPTTSICDSPSSGFL*PQKHAWSIWGTGQK Trigger: CTTCTGGCCTGTGCCCCAGATAGACCAGGCATGCTTCTGTGGCCAGAGAAAGCCCGAGGATGGAGAGTCACAGATGCTTGTGGTAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 90 bp | TTCCCATTTCCATACACACCACCTGCTACCTACCACAAGCATCTGTaGCTCTCCATCCTCGGGCTTTCTCTGGCCACAGAAGCATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPFPYTPPATYHKHL*LSILGLSLATEACL Trigger: CAGGCATGCTTCTGTGGCCAGAGAAAGCCCGAGGATGGAGAGTCACAGATGCTTGTGGTAGGTAGCAGGTGGTGTGTATGGAAATGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 90 bp | CCCAAATCCCCTTGGCATCCCATTCCCATTTCCATACACACCACCTaGTACCTACCACAAGCATCTGTGACTCTCCATCCTCGGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PKSPWHPIPISIHTT*YLPQASVTLHPRAF Trigger: GAAAGCCCGAGGATGGAGAGTCACAGATGCTTGTGGTAGGTAGCAGGTGGTGTGTATGGAAATGGGAATGGGATGCCAAGGGGATTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | CAATGTGCTGGAGCATCCACGGGAGAGGGGGATGAACTTTGGATCTaGGTTTTCCATCCATACATGTTCCTGCTCCATCTGGCTCACACT | + |
|
Preference number: 5 (lower is better) Translates to: QCAGASTGEGDELWI*VFHPYMFLLHLAHT Trigger: AGTGTGAGCCAGATGGAGCAGGAACATGTATGGATGGAAAACCCAGATCCAAAGTTCATCCCCCTCTCCCGTGGATGCTCCAGCACATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | ACCTTGCAATGTGCTGGAGCATCCACGGGAGAGGGGGATGAACTTTaGATCTGGGTTTTCCATCCATACATGTTCCTGCTCCATCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLQCAGASTGEGDEL*IWVFHPYMFLLHLA Trigger: AGCCAGATGGAGCAGGAACATGTATGGATGGAAAACCCAGATCCAAAGTTCATCCCCCTCTCCCGTGGATGCTCCAGCACATTGCAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 90 bp | ACCGTTTTCCTATGGCTGCATAGGAAAATGGTTTGCTTCTCCTCGTaGCATGCTGGAGAGTACAGGGACTCTCGGGAGTTAACTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVFLWLHRKMVCFSS*HAGEYRDSRELTQS Trigger: GGACTGAGTTAACTCCCGAGAGTCCCTGTACTCTCCAGCATGGCACGAGGAGAAGCAAACCATTTTCCTATGCAGCCATAGGAAAACGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 90 bp | TGTCGTGTTTGTACCGTTTTCCTATGGCTGCATAGGAAAATGGTTTaGTTCTCCTCGTGCCATGCTGGAGAGTACAGGGACTCTCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRVCTVFLWLHRKMV*FSSCHAGEYRDSRE Trigger: CTCCCGAGAGTCCCTGTACTCTCCAGCATGGCACGAGGAGAAGCAAACCATTTTCCTATGCAGCCATAGGAAAACGGTACAAACACGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 90 bp | AGGGGGATGAACTTTGGATCTGGGTTTTCCATCCATACATGTTCCTaGTCCATCTGGCTCACACTGACCATCAAGCTCTTGCGGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGMNFGSGFSIHTCS*SIWLTLTIKLLRSA Trigger: AGCTGACCGCAAGAGCTTGATGGTCAGTGTGAGCCAGATGGAGCAGGAACATGTATGGATGGAAAACCCAGATCCAAAGTTCATCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 90 bp | CTGGGTTTTCCATCCATACATGTTCCTGCTCCATCTGGCTCACACTaGCCATCAAGCTCTTGCGGTCAGCTGAATTTCAGTGTCGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGFPSIHVPAPSGSH*PSSSCGQLNFSVVF Trigger: AAACACGACACTGAAATTCAGCTGACCGCAAGAGCTTGATGGTCAGTGTGAGCCAGATGGAGCAGGAACATGTATGGATGGAAAACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | CAGCAAAGTCACACAGCTGGTGACAGGAGGCCTGGGAGTAAGATCTaGTTTCCCTTTCTCTCTGCCAAGTTCAACTTATACATAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QQSHTAGDRRPGSKI*FPFLSAKFNLYIAV Trigger: GACAGCTATGTATAAGTTGAACTTGGCAGAGAGAAAGGGAAACCAGATCTTACTCCCAGGCCTCCTGTCACCAGCTGTGTGACTTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 90 bp | GGTCAGCTGAATTTCAGTGTCGTGTTTGTACCGTTTTCCTATGGCTaGATAGGAAAATGGTTTGCTTCTCCTCGTGCCATGCTGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GQLNFSVVFVPFSYG*IGKWFASPRAMLES Trigger: ACTCTCCAGCATGGCACGAGGAGAAGCAAACCATTTTCCTATGCAGCCATAGGAAAACGGTACAAACACGACACTGAAATTCAGCTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | AAGAAACACCTGAGTGAAGAATGGAAGGCAAAATTCTGTGTGTATTaGCTTGACCATGGAAGAGAAGCTAGGCAGGAAAGAGGTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KKHLSEEWKAKFCVY*LDHGREARQERGCR Trigger: TCTGCAACCTCTTTCCTGCCTAGCTTCTCTTCCATGGTCAAGCCAATACACACAGAATTTTGCCTTCCATTCTTCACTCAGGTGTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | CCAATGTTGCCCCAGAGGTTGGCAAATGTTAACACAGTTGCGTTGTaGAAACTAATTTGGGTTCACAAAATCAGATGTGTAGAAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PMLPQRLANVNTVAL*KLIWVHKIRCVESA Trigger: TGCACTTTCTACACATCTGATTTTGTGAACCCAAATTAGTTTCCACAACGCAACTGTGTTAACATTTGCCAACCTCTGGGGCAACATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 90 bp | ACACACACACACACACACACACACAAACACAGTAATAGACCAAGATaGACCACTTTGAAGGAAGTTGCCCTTAGTGTTAACAAAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTHKHSNRPR*TTLKEVALSVNKRA Trigger: TGCTCTTTTGTTAACACTAAGGGCAACTTCCTTCAAAGTGGTTCATCTTGGTCTATTACTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | TGTCTTCCAGCAGGGCCAAATACCTTCAAAAATAATAGGAAACTTTaGTTTTACTACACACACACACACACACACACACACACACACACA | + |
|
Preference number: 5 (lower is better) Translates to: CLPAGPNTFKNNRKL*FYYTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTAAAACCAAAGTTTCCTATTATTTTTGAAGGTATTTGGCCCTGCTGGAAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 90 bp | TATATAACTGAATTAATTTCCGTATCAAGCTCGCAGTCCCCCAGGTaGCAAAACTTAATTTCCAACAAATCATGTCCTTGTGCCAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YITELISVSSSQSPR*QNLISNKSCPCAKV Trigger: AACCTTGGCACAAGGACATGATTTGTTGGAAATTAAGTTTTGTCACCTGGGGGACTGCGAGCTTGATACGGAAATTAATTCAGTTATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 90 bp | ACACACACACACACAAACACAGTAATAGACCAAGATGAACCACTTTaGAGGAAGTTGCCCTTAGTGTTAACAAAAGAGCAGATTTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: THTHTNTVIDQDEPL*RKLPLVLTKEQILD Trigger: GTCTAAAATCTGCTCTTTTGTTAACACTAAGGGCAACTTCCTTCAAAGTGGTTCATCTTGGTCTATTACTGTGTTTGTGTGTGTGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 90 bp | AAGACAACATATACATTATGTTGTATATGTTGGGATAGTCAGGGCTaGAGGCTCCCAAACTTGTATATGAAACATGACATAACAGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KTTYTLCCICWDSQG*RLPNLYMKHDITER Trigger: TCTTTCTGTTATGTCATGTTTCATATACAAGTTTGGGAGCCTCCAGCCCTGACTATCCCAACATATACAACATAATGTATATGTTGTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | GGCTTTCTCTGGCCACAGAAGCATGCCTGGTCTATCTaGGGCACAGGCCAGAAGTTTGGGGAGGTTAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: GFLWPQKHAWSI*GTGQKFGEVNA Trigger: GGCATTAACCTCCCCAAACTTCTGGCCTGTGCCCCAGATAGACCAGGCATGCTTCTGTGGCCAGAGAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 72 bp | AGCATGCCTGGTCTATCTGGGGCACAGGCCAGAAGTTaGGGGAGGTTAATGCCCTTAACCAGTGAAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SMPGLSGAQARS*GRLMPLTSEAR Trigger: CCGTGCTTCACTGGTTAAGGGCATTAACCTCCCCAAACTTCTGGCCTGTGCCCCAGATAGACCAGGCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 72 bp | CCATACACACCACCTGCTACCTACCACAAGCATCTGTaGCTCTCCATCCTCGGGCTTTCTCTGGCCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PYTPPATYHKHL*LSILGLSLATE Trigger: TTCTGTGGCCAGAGAAAGCCCGAGGATGGAGAGTCACAGATGCTTGTGGTAGGTAGCAGGTGGTGTGTATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 72 bp | CTTGTGCCAAGGTTGCCTCTAAGTTTCTGGGAAACCTaGCAATGTGCTGGAGCATCCACGGGAGAGGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LVPRLPLSFWET*QCAGASTGEGD Trigger: ATCCCCCTCTCCCGTGGATGCTCCAGCACATTGCAAGGTTTCCCAGAAACTTAGAGGCAACCTTGGCACAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | GGAGCATCCACGGGAGAGGGGGATGAACTTTGGATCTaGGTTTTCCATCCATACATGTTCCTGCTCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GASTGEGDELWI*VFHPYMFLLHL Trigger: CAGATGGAGCAGGAACATGTATGGATGGAAAACCCAGATCCAAAGTTCATCCCCCTCTCCCGTGGATGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | TGTGCTGGAGCATCCACGGGAGAGGGGGATGAACTTTaGATCTGGGTTTTCCATCCATACATGTTCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CAGASTGEGDEL*IWVFHPYMFLL Trigger: GAGCAGGAACATGTATGGATGGAAAACCCAGATCCAAAGTTCATCCCCCTCTCCCGTGGATGCTCCAGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | AAGGGGAATCCCTGGGATACTGTGAGTGTTATTGCCTaGATTAGGGTAATGCGGCAGATGCTTGGTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KGNPWDTVSVIA*IRVMRQMLGAL Trigger: CAGGGCACCAAGCATCTGCCGCATTACCCTAATCCAGGCAATAACACTCACAGTATCCCAGGGATTCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 90 bp | AATCATGTCCTTGTGCCAAGGTTGCCTCTAAGTTTCTGGGAAACCTaGCAATGTGCTGGAGCATCCACGGGAGAGGGGGATGAACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: NHVLVPRLPLSFWET*QCAGASTGEGDELW Trigger: CCAAAGTTCATCCCCCTCTCCCGTGGATGCTCCAGCACATTGCAAGGTTTCCCAGAAACTTAGAGGCAACCTTGGCACAAGGACATGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 72 bp | CTATGGCTGCATAGGAAAATGGTTTGCTTCTCCTCGTaGCATGCTGGAGAGTACAGGGACTCTCGGGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LWLHRKMVCFSS*HAGEYRDSREL Trigger: TAACTCCCGAGAGTCCCTGTACTCTCCAGCATGGCACGAGGAGAAGCAAACCATTTTCCTATGCAGCCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 72 bp | CCTTGGCATCCCATTCCCATTTCCATACACACCACCTaGTACCTACCACAAGCATCTGTGACTCTCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PWHPIPISIHTT*YLPQASVTLHP Trigger: AGGATGGAGAGTCACAGATGCTTGTGGTAGGTAGCAGGTGGTGTGTATGGAAATGGGAATGGGATGCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | TCTGGGTTTTCCATCCATACATGTTCCTGCTCCATCTaGCTCACACTGACCATCAAGCTCTTGCGGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGFSIHTCSCSI*LTLTIKLLRSA Trigger: AGCTGACCGCAAGAGCTTGATGGTCAGTGTGAGCCAGATGGAGCAGGAACATGTATGGATGGAAAACCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 72 bp | TCCTGCTCCATCTGGCTCACACTGACCATCAAGCTCTaGCGGTCAGCTGAATTTCAGTGTCGTGTTTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: SCSIWLTLTIKL*RSAEFQCRVCT Trigger: GGTACAAACACGACACTGAAATTCAGCTGACCGCAAGAGCTTGATGGTCAGTGTGAGCCAGATGGAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 72 bp | CCATCCATACATGTTCCTGCTCCATCTGGCTCACACTaGCCATCAAGCTCTTGCGGTCAGCTGAATTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSIHVPAPSGSH*PSSSCGQLNFS Trigger: ACTGAAATTCAGCTGACCGCAAGAGCTTGATGGTCAGTGTGAGCCAGATGGAGCAGGAACATGTATGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 72 bp | CTTGCAATGTGCTGGAGCATCCACGGGAGAGGGGGATaGACTTTGGATCTGGGTTTTCCATCCATACATGTT | + |
|
Preference number: 6 (lower is better) Translates to: LAMCWSIHGRGG*TLDLGFPSIHV Trigger: AACATGTATGGATGGAAAACCCAGATCCAAAGTTCATCCCCCTCTCCCGTGGATGCTCCAGCACATTGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 72 bp | TGTACCGTTTTCCTATGGCTGCATAGGAAAATGGTTTaGTTCTCCTCGTGCCATGCTGGAGAGTACAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CTVFLWLHRKMV*FSSCHAGEYRD Trigger: GTCCCTGTACTCTCCAGCATGGCACGAGGAGAAGCAAACCATTTTCCTATGCAGCCATAGGAAAACGGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | AATCATGTCCTTGTGCCAAGGTTGCCTCTAAGTTTCTaGGAAACCTTGCAATGTGCTGGAGCATCCACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NHVLVPRLPLSF*ETLQCAGASTG Trigger: TCCCGTGGATGCTCCAGCACATTGCAAGGTTTCCCAGAAACTTAGAGGCAACCTTGGCACAAGGACATGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | CACACAGCTGGTGACAGGAGGCCTGGGAGTAAGATCTaGTTTCCCTTTCTCTCTGCCAAGTTCAACTTATAC | + |
|
Preference number: 6 (lower is better) Translates to: HTAGDRRPGSKI*FPFLSAKFNLY Trigger: GTATAAGTTGAACTTGGCAGAGAGAAAGGGAAACCAGATCTTACTCCCAGGCCTCCTGTCACCAGCTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 90 bp | CATACATGTTCCTGCTCCATCTGGCTCACACTGACCATCAAGCTCTaGCGGTCAGCTGAATTTCAGTGTCGTGTTTGTACCGTTTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: HTCSCSIWLTLTIKL*RSAEFQCRVCTVFL Trigger: TAGGAAAACGGTACAAACACGACACTGAAATTCAGCTGACCGCAAGAGCTTGATGGTCAGTGTGAGCCAGATGGAGCAGGAACATGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS GCA 72 bp | AACTTTGGATCTGGGTTTTCCATCCATACATGTTCCTaGTCCATCTGGCTCACACTGACCATCAAGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NFGSGFSIHTCS*SIWLTLTIKLL Trigger: CAAGAGCTTGATGGTCAGTGTGAGCCAGATGGAGCAGGAACATGTATGGATGGAAAACCCAGATCCAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | CTGAGTGAAGAATGGAAGGCAAAATTCTGTGTGTATTaGCTTGACCATGGAAGAGAAGCTAGGCAGGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSEEWKAKFCVY*LDHGREARQER Trigger: TCTTTCCTGCCTAGCTTCTCTTCCATGGTCAAGCCAATACACACAGAATTTTGCCTTCCATTCTTCACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 90 bp | CCAAACTTGTATATGAAACATGACATAACAGAAAGAGCAGGCTATTaGGAGGGAGAAGGTTGGGTTCAAGCCCAAGCCCTCAATCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: PNLYMKHDITERAGY*EGEGWVQAQALNLI Trigger: AATGAGATTGAGGGCTTGGGCTTGAACCCAACCTTCTCCCTCCAAATAGCCTGCTCTTTCTGTTATGTCATGTTTCATATACAAGTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 90 bp | CTGAGCAGTGAGTTACTAAGAAAATTGAGGAAGAGTGGGGAGTCTTaGGAGATAGCGATAAAGAGATATTCCCTCGTTGAGTGTTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: LSSELLRKLRKSGES*EIAIKRYSLVECLT Trigger: GGTTAAACACTCAACGAGGGAATATCTCTTTATCGCTATCTCCAAAGACTCCCCACTCTTCCTCAATTTTCTTAGTAACTCACTGCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 72 bp | ACACAGGCAGAACACTCACTTTATAGGTATTGGAACTaGGACTTAGGGGAAAGAAATGACTTCAGCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TQAEHSLYRYWN*DLGERNDFSKV Trigger: GACTTTGCTGAAGTCATTTCTTTCCCCTAAGTCTCAGTTCCAATACCTATAAAGTGAGTGTTCTGCCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | CCCCAGAGGTTGGCAAATGTTAACACAGTTGCGTTGTaGAAACTAATTTGGGTTCACAAAATCAGATGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PQRLANVNTVAL*KLIWVHKIRCV Trigger: TACACATCTGATTTTGTGAACCCAAATTAGTTTCCACAACGCAACTGTGTTAACATTTGCCAACCTCTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 72 bp | TTGCCCCAGAGGTTGGCAAATGTTAACACAGTTGCGTaGTGGAAACTAATTTGGGTTCACAAAATCAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: LPQRLANVNTVA*WKLIWVHKIRC Trigger: ACATCTGATTTTGTGAACCCAAATTAGTTTCCACAACGCAACTGTGTTAACATTTGCCAACCTCTGGGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 72 bp | AAAAAGCAACAAAGACAACCAATGTTGCCCCAGAGGTaGGCAAATGTTAACACAGTTGCGTTGTGGAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: KKQQRQPMLPQR*ANVNTVALWKL Trigger: TAGTTTCCACAACGCAACTGTGTTAACATTTGCCAACCTCTGGGGCAACATTGGTTGTCTTTGTTGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CAA 90 bp | CAACCAATGTTGCCCCAGAGGTTGGCAAATGTTAACACAGTTGCGTaGTGGAAACTAATTTGGGTTCACAAAATCAGATGTGTAGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: QPMLPQRLANVNTVA*WKLIWVHKIRCVES Trigger: ACTTTCTACACATCTGATTTTGTGAACCCAAATTAGTTTCCACAACGCAACTGTGTTAACATTTGCCAACCTCTGGGGCAACATTGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 72 bp | TCTTCCAAATCTTGCCTGTGTTTCGACCGCAACTTTTaGCAATTCCATAAGGCAAAATGTTCACTCTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSKSCLCFDRNF*QFHKAKCSLCF Trigger: AAAACAGAGTGAACATTTTGCCTTATGGAATTGTCAAAAGTTGCGGTCGAAACACAGGCAAGATTTGGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS CCA 72 bp | TATACATTATGTTGTATATGTTGGGATAGTCAGGGCTaGAGGCTCCCAAACTTGTATATGAAACATGACATA | + |
|
Preference number: 6 (lower is better) Translates to: YTLCCICWDSQG*RLPNLYMKHDI Trigger: TATGTCATGTTTCATATACAAGTTTGGGAGCCTCCAGCCCTGACTATCCCAACATATACAACATAATGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||
| CDS TCA 72 bp | AATCTCTGCTTGTTTTGGTTACCACATCACAGTGAATaGGAACCCATAAAGTCAGGACATTTCAACATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: NLCLFWLPHHSE*EPIKSGHFNIN Trigger: ATTAATGTTGAAATGTCCTGACTTTATGGGTTCTCATTCACTGTGATGTGGTAACCAAAACAAGCAGAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419499.1 |
||