Pregenerated sensors for LINC00391 (Homo sapiens)
Ensembl gene IDs: ENSG00000238230Ensembl transcript IDs: ENST00000433569.1, ENST00000670861.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCTCATCCCGCCAAGCCTTCGCCTCCTCGCTGAGACTCTGAGCTaGGCTGGGGTTGGCGGGCACCCGATTCCGCCCCGGCCCAGACCG | + |
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Preference number: 5 (lower is better) Translates to: SLIPPSLRLLAETLS*AGVGGHPIPPRPRP Trigger: CGGTCTGGGCCGGGGCGGAATCGGGTGCCCGCCAACCCCAGCGCAGCTCAGAGTCTCAGCGAGGAGGCGAAGGCTTGGCGGGATGAGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 90 bp | ACGGAAGCCTCATCCCGCCAAGCCTTCGCCTCCTCGCTGAGACTCTaGGCTGCGCTGGGGTTGGCGGGCACCCGATTCCGCCCCGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: TEASSRQAFASSLRL*AALGLAGTRFRPGP Trigger: TGGGCCGGGGCGGAATCGGGTGCCCGCCAACCCCAGCGCAGCTCAGAGTCTCAGCGAGGAGGCGAAGGCTTGGCGGGATGAGGCTTCCGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 90 bp | CAGAGACCGCGCTGGTTTAGGTGGACCCGCAGTCCCGCCCGCATCTaGAACGAGCTGCTTCGCAGTTCCGGCTCCCGGCGCCCCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: QRPRWFRWTRSPARI*NELLRSSGSRRPRE Trigger: TTCTCTGGGGCGCCGGGAGCCGGAACTGCGAAGCAGCTCGTTCCAGATGCGGGCGGGACTGCGGGTCCACCTAAACCAGCGCGGTCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 90 bp | CCCAGCCACGGACTAGCGCGGCCTTTATGTCCAATAAATGTGATCTaGATGCGGGAAGGCAGCCCAGGACCTGGGCTGGGGCGCGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: PSHGLARPLCPINVI*MREGSPGPGLGRVG Trigger: ACCCACGCGCCCCAGCCCAGGTCCTGGGCTGCCTTCCCGCATCCAGATCACATTTATTGGACATAAAGGCCGCGCTAGTCCGTGGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 90 bp | CTTAGACTCGTGGTGTGGGCGGAGGTGGCAGCCCAAGGTGGGACGTaGGGCCTTGTTGGTTTTGCAGTAGCAGGAGTCTGCAGGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LRLVVWAEVAAQGGT*GLVGFAVAGVCRLE Trigger: CTCAAGCCTGCAGACTCCTGCTACTGCAAAACCAACAAGGCCCCACGTCCCACCTTGGGCTGCCACCTCCGCCCACACCACGAGTCTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 90 bp | GCAGTCCTGGGGATACTAAGAAGCCGACTACTTAGACTCGTGGTGTaGGCGGAGGTGGCAGCCCAAGGTGGGACGTGGGGCCTTGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: AVLGILRSRLLRLVV*AEVAAQGGTWGLVG Trigger: ACCAACAAGGCCCCACGTCCCACCTTGGGCTGCCACCTCCGCCCACACCACGAGTCTAAGTAGTCGGCTTCTTAGTATCCCCAGGACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 90 bp | TGTGTGCATATGAGAGCGGAGAGACAGCGACCTGGAGGCCATGGGTaGGGGCGGGTGGTGAAGCTGCCGAAGCCTACACATACACTTAGC | + |
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Preference number: 5 (lower is better) Translates to: CVHMRAERQRPGGHG*GRVVKLPKPTHTLS Trigger: GCTAAGTGTATGTGTAGGCTTCGGCAGCTTCACCACCCGCCCCCACCCATGGCCTCCAGGTCGCTGTCTCTCCGCTCTCATATGCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 90 bp | GCGGTGAGCCTAGCCGCCGCGCGCTCATGTTTATTCACGCGGCCTTaGGCAGCCGAGCTCCAATCCATATTAATCAACCGCTCGACCTAC | + |
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Preference number: 5 (lower is better) Translates to: AVSLAAARSCLFTRP*AAELQSILINRSTY Trigger: GTAGGTCGAGCGGTTGATTAATATGGATTGGAGCTCGGCTGCTCAAGGCCGCGTGAATAAACATGAGCGCGCGGCGGCTAGGCTCACCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 90 bp | TCTAGAAAGCAAAGAAACGGTGTCCAAAGACCCCGGAGAGTTGAGTaGGCGCAGATCCGTGACGCCTGCGGTACGCTAGGGCATCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SRKQRNGVQRPRRVE*AQIRDACGTLGHPG Trigger: GCCTGGATGCCCTAGCGTACCGCAGGCGTCACGGATCTGCGCTCACTCAACTCTCCGGGGTCTTTGGACACCGTTTCTTTGCTTTCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 90 bp | CAGCCGCCTGTAGGCCCGCAGACTTCAGAAAACAAGGGCCTTCTGTaGGCGCTGTGTCCTCCCCGGAATCCGCGGCTTAACACATTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QPPVGPQTSENKGLL*ALCPPRNPRLNTFF Trigger: AAAGAATGTGTTAAGCCGCGGATTCCGGGGAGGACACAGCGCTCACAGAAGGCCCTTGTTTTCTGAAGTCTGCGGGCCTACAGGCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS GCA 90 bp | CTTGGCTCACTGCAGCCTCAACCTTCTGGACCCAAACCATCCTCCTaGCTCACTGCCTCAGCCTCCCATGTAGCTAGGACTACCGGCATA | + |
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Preference number: 5 (lower is better) Translates to: LGSLQPQPSGPKPSS*LTASASHVARTTGI Trigger: TATGCCGGTAGTCCTAGCTACATGGGAGGCTGAGGCAGTGAGGCAGGAGGATGGTTTGGGTCCAGAAGGTTGAGGCTGCAGTGAGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CCA 90 bp | ATGTCCAATAAATGTGATCTGGATGCGGGAAGGCAGCCCAGGACCTaGGCTGGGGCGCGTGGGTCAATAGATGTCCCAAGCCCACACCAT | + |
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Preference number: 5 (lower is better) Translates to: MSNKCDLDAGRQPRT*AGARGSIDVPSPHH Trigger: ATGGTGTGGGCTTGGGACATCTATTGACCCACGCGCCCCAGCCCAGGTCCTGGGCTGCCTTCCCGCATCCAGATCACATTTATTGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 90 bp | GTCCTTTGGCCAGATACATCAGCTCTTGCCCTGTGGGTCTTTCCATaGAGCAGCTTGCTTCCCTTAGAACAAGAGAGTGTCCCCCGACCT | + |
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Preference number: 5 (lower is better) Translates to: VLWPDTSALALWVFP*SSLLPLEQESVPRP Trigger: AGGTCGGGGGACACTCTCTTGTTCTAAGGGAAGCAAGCTGCTCCATGGAAAGACCCACAGGGCAAGAGCTGATGTATCTGGCCAAAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS GCA 90 bp | CGAGGCTTGCCCTGCTGTTCTAGAATTGTCAACCTCTGTTCTTCCTaGAAAGAGAAAAGCTCCCAGCCACGGACTAGCGCGGCCTTTATG | + |
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Preference number: 5 (lower is better) Translates to: RGLPCCSRIVNLCSS*KEKSSQPRTSAAFM Trigger: CATAAAGGCCGCGCTAGTCCGTGGCTGGGAGCTTTTCTCTTTGCAGGAAGAACAGAGGTTGACAATTCTAGAACAGCAGGGCAAGCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 90 bp | GTCCTTTGGCCAGATACATCAGCTCTTGCCCTGTGGGTCTTTCCATaGAGCAGCTTGCTTCCCTTAGAACAAGAGCGCTGGATTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VLWPDTSALALWVFP*SSLLPLEQERWIFL Trigger: CAGGAAAATCCAGCGCTCTTGTTCTAAGGGAAGCAAGCTGCTCCATGGAAAGACCCACAGGGCAAGAGCTGATGTATCTGGCCAAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CCA 90 bp | GTGGACACACTTAGGGTCGCCTTTGTTTTGCGCAGTGATTCAAGTTaGGTAACCCTTGCTCAACACTTGGGAAATGGGGAGAATCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: VDTLRVAFVLRSDSS*VTLAQHLGNGENLP Trigger: GGGGAGATTCTCCCCATTTCCCAAGTGTTGAGCAAGGGTTACCCAACTTGAATCACTGCGCAAAACAAAGGCGACCCTAAGTGTGTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 90 bp | CTTTTTCACTTAGCTGCTGACAGGCCTCAAGTCTTTGCTGTCCTTTaGCCAGATACATCAGCTCTTGCCCTGTGGGTCTTTCCATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LFHLAADRPQVFAVL*PDTSALALWVFPWS Trigger: GCTCCATGGAAAGACCCACAGGGCAAGAGCTGATGTATCTGGCCAAAGGACAGCAAAGACTTGAGGCCTGTCAGCAGCTAAGTGAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000433569.1 ENST00000670861.1 |
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| CDS TCA 90 bp | GGCTATTTACAGGTGCAATCGTACTACTCATCAGTGCAGGAGTTTTaGCTTGCTCCATTTCCAACCTGTGCCAGTTCACCCCTCCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: GYLQVQSYYSSVQEF*LAPFPTCASSPLLR Trigger: CCTAAGGAGGGGTGAACTGGCACAGGTTGGAAATGGAGCAAGTCAAAACTCCTGCACTGATGAGTAGTACGATTGCACCTGTAAATAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS TCA 90 bp | GTAGTCATCTCAAGGTTTGATCGGGTGACTTTTTCACTTAGCTGCTaGCAGGCCTCAAGTCTTTGCTGTCCTTTGGCCAGATACATCAGC | + |
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Preference number: 5 (lower is better) Translates to: VVISRFDRVTFSLSC*QASSLCCPLARYIS Trigger: GCTGATGTATCTGGCCAAAGGACAGCAAAGACTTGAGGCCTGTCAGCAGCTAAGTGAAAAAGTCACCCGATCAAACCTTGAGATGACTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000433569.1 ENST00000670861.1 |
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| CDS TCA 90 bp | TATCTTATGGTTTCAGTGGGTTTTGAATCCAGGGGGCCTTGCTGTTaGGTATCCTCTAGCTCAGGGTCTCTTCCAAAGCTGCAATCAAGG | + |
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Preference number: 5 (lower is better) Translates to: YLMVSVGFESRGPCC*VSSSSGSLPKLQSR Trigger: CCTTGATTGCAGCTTTGGAAGAGACCCTGAGCTAGAGGATACTCAACAGCAAGGCCCCCTGGATTCAAAACCCACTGAAACCATAAGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS GCA 90 bp | GTCTTGCTATGTTGTCCAGGCTACATTGCTTTGGCTATTTACAGGTaGAATCGTACTACTCATCAGTGCAGGAGTTTTGACTTGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VLLCCPGYIALAIYR*NRTTHQCRSFDLLH Trigger: ATGGAGCAAGTCAAAACTCCTGCACTGATGAGTAGTACGATTGCACCTGTAAATAGCCAAAGCAATGTAGCCTGGACAACATAGCAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS TCA 90 bp | GATGTTGCAAGAGAAAGGGGAGAGATTTTTCTGGAGCTATGTCCTTaGCTACATCACACAGTATATTCACTACCTCTTGCTGTGTCACAA | + |
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Preference number: 5 (lower is better) Translates to: DVARERGEIFLELCP*LHHTVYSLPLAVSQ Trigger: TTGTGACACAGCAAGAGGTAGTGAATATACTGTGTGATGTAGTCAAGGACATAGCTCCAGAAAAATCTCTCCCCTTTCTCTTGCAACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CCA 90 bp | GAGCAGCTTGCTTCCCTTAGAACAAGAGCGCTGGATTTTCCTGCGTaGATTTCACTCATTTTTCGAAAGTCATTGACTTCAAACATTTGT | + |
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Preference number: 5 (lower is better) Translates to: EQLASLRTRALDFPA*ISLIFRKSLTSNIC Trigger: ACAAATGTTTGAAGTCAATGACTTTCGAAAAATGAGTGAAATCCACGCAGGAAAATCCAGCGCTCTTGTTCTAAGGGAAGCAAGCTGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CCA 90 bp | GTGGATTTCACTCATTTTTCGAAAGTCATTGACTTCAAACATTTGTaGCTCAAGAGAAAAAGACTTGTTGATGGTTTGTTTCACCATCTT | + |
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Preference number: 5 (lower is better) Translates to: VDFTHFSKVIDFKHL*LKRKRLVDGLFHHL Trigger: AAGATGGTGAAACAAACCATCAACAAGTCTTTTTCTCTTGAGCCACAAATGTTTGAAGTCAATGACTTTCGAAAAATGAGTGAAATCCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS GCA 72 bp | CCGCCAAGCCTTCGCCTCCTCGCTGAGACTCTGAGCTaGGCTGGGGTTGGCGGGCACCCGATTCCGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PPSLRLLAETLS*AGVGGHPIPPR Trigger: CCGGGGCGGAATCGGGTGCCCGCCAACCCCAGCGCAGCTCAGAGTCTCAGCGAGGAGGCGAAGGCTTGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 72 bp | CGGAAGCCTCATCCCGCCAAGCCTTCGCCTCCTCGCTaGGACTCTGAGCTGCGCTGGGGTTGGCGGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: RKPHPAKPSPPR*DSELRWGWRAP Trigger: GGGTGCCCGCCAACCCCAGCGCAGCTCAGAGTCTCAGCGAGGAGGCGAAGGCTTGGCGGGATGAGGCTTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 72 bp | CGCTGGTTTAGGTGGACCCGCAGTCCCGCCCGCATCTaGAACGAGCTGCTTCGCAGTTCCGGCTCCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RWFRWTRSPARI*NELLRSSGSRR Trigger: GCGCCGGGAGCCGGAACTGCGAAGCAGCTCGTTCCAGATGCGGGCGGGACTGCGGGTCCACCTAAACCAGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 72 bp | TCATCCCGCCAAGCCTTCGCCTCCTCGCTGAGACTCTaGGCTGCGCTGGGGTTGGCGGGCACCCGATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SSRQAFASSLRL*AALGLAGTRFR Trigger: GCGGAATCGGGTGCCCGCCAACCCCAGCGCAGCTCAGAGTCTCAGCGAGGAGGCGAAGGCTTGGCGGGATGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 72 bp | CGCCCCGGCCCAGACCGGTCACTCAGTGTGTGCATATaGGAGCGGAGAGACAGCGACCTGGAGGCCATGGGT | + |
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Preference number: 6 (lower is better) Translates to: RPGPDRSLSVCI*ERRDSDLEAMG Trigger: ACCCATGGCCTCCAGGTCGCTGTCTCTCCGCTCTCATATGCACACACTGAGTGACCGGTCTGGGCCGGGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 72 bp | GAAGCCGACTACTTAGACTCGTGGTGTGGGCGGAGGTaGCAGCCCAAGGTGGGACGTGGGGCCTTGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: EADYLDSWCGRR*QPKVGRGALLV Trigger: AACCAACAAGGCCCCACGTCCCACCTTGGGCTGCCACCTCCGCCCACACCACGAGTCTAAGTAGTCGGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 72 bp | GGGATACTAAGAAGCCGACTACTTAGACTCGTGGTGTaGGCGGAGGTGGCAGCCCAAGGTGGGACGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: GILRSRLLRLVV*AEVAAQGGTWG Trigger: GCCCCACGTCCCACCTTGGGCTGCCACCTCCGCCCACACCACGAGTCTAAGTAGTCGGCTTCTTAGTATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 72 bp | GGACAGGGGAGGGGCGGCAAGCTCCAAGTAGCGCTCTaGGGACTTCATCCCGCCAACCTAATGACTGGCACG | + |
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Preference number: 6 (lower is better) Translates to: GQGRGGKLQVAL*GLHPANLMTGT Trigger: CGTGCCAGTCATTAGGTTGGCGGGATGAAGTCCCAAGAGCGCTACTTGGAGCTTGCCGCCCCTCCCCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 72 bp | GCCTTGGGCCTTGGGATCTGGGTTGGGTCCCGGGCTTaGTCTTGTCCCCAACACTTTAGCAGACAAACCCCG | + |
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Preference number: 6 (lower is better) Translates to: ALGLGIWVGSRA*SCPQHFSRQTP Trigger: CGGGGTTTGTCTGCTAAAGTGTTGGGGACAAGACCAAGCCCGGGACCCAACCCAGATCCCAAGGCCCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 72 bp | CAAAGAAACGGTGTCCAAAGACCCCGGAGAGTTGAGTaGGCGCAGATCCGTGACGCCTGCGGTACGCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: QRNGVQRPRRVE*AQIRDACGTLG Trigger: CCCTAGCGTACCGCAGGCGTCACGGATCTGCGCTCACTCAACTCTCCGGGGTCTTTGGACACCGTTTCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 72 bp | GTAGGCCCGCAGACTTCAGAAAACAAGGGCCTTCTGTaGGCGCTGTGTCCTCCCCGGAATCCGCGGCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: VGPQTSENKGLL*ALCPPRNPRLN Trigger: GTTAAGCCGCGGATTCCGGGGAGGACACAGCGCTCACAGAAGGCCCTTGTTTTCTGAAGTCTGCGGGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 90 bp | AGCGGTGAGCCTAGCCGCCGCGCGCTCATGTTTATTCACGCGGCCTaGAGCAGCCGAGCTCCAATCCATATTAATCAACCGCTCGACCTA | + |
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Preference number: 6 (lower is better) Translates to: SGEPSRRALMFIHAA*SSRAPIHINQPLDL Trigger: TAGGTCGAGCGGTTGATTAATATGGATTGGAGCTCGGCTGCTCAAGGCCGCGTGAATAAACATGAGCGCGCGGCGGCTAGGCTCACCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS TCA 72 bp | CTAGCCGCCGCGCGCTCATGTTTATTCACGCGGCCTTaGGCAGCCGAGCTCCAATCCATATTAATCAACCGC | + |
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Preference number: 6 (lower is better) Translates to: LAAARSCLFTRP*AAELQSILINR Trigger: GCGGTTGATTAATATGGATTGGAGCTCGGCTGCTCAAGGCCGCGTGAATAAACATGAGCGCGCGGCGGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 72 bp | CCTAGCCGCCGCGCGCTCATGTTTATTCACGCGGCCTaGAGCAGCCGAGCTCCAATCCATATTAATCAACCG | + |
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Preference number: 6 (lower is better) Translates to: PSRRALMFIHAA*SSRAPIHINQP Trigger: CGGTTGATTAATATGGATTGGAGCTCGGCTGCTCAAGGCCGCGTGAATAAACATGAGCGCGCGGCGGCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CCA 72 bp | AGCGCTCTTGGGACTTCATCCCGCCAACCTAATGACTaGCACGATGCATGTCTTTTGCGAAGCCCTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SALGTSSRQPND*HDACLLRSPSH Trigger: GTGGGAAGGGCTTCGCAAAAGACATGCATCGTGCCAGTCATTAGGTTGGCGGGATGAAGTCCCAAGAGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 90 bp | TCTCCACCCCGCGCATCCGTGGACACACTTAGGGTCGCCTTTGTTTaGCGCAGTGATTCAAGTTGGGTAACCCTTGCTCAACACTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SPPRASVDTLRVAFV*RSDSSWVTLAQHLG Trigger: TCCCAAGTGTTGAGCAAGGGTTACCCAACTTGAATCACTGCGCAAAACAAAGGCGACCCTAAGTGTGTCCACGGATGCGCGGGGTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 90 bp | CCAGATACATCAGCTCTTGCCCTGTGGGTCTTTCCATGGAGCAGCTaGCTTCCCTTAGAACAAGAGAGTGTCCCCCGACCTGTCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PDTSALALWVFPWSS*LPLEQESVPRPVCL Trigger: CAGACAGACAGGTCGGGGGACACTCTCTTGTTCTAAGGGAAGCAAGCTGCTCCATGGAAAGACCCACAGGGCAAGAGCTGATGTATCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS GCA 72 bp | TCGCCAGTAGACCCAAACCTCCTCCGAGGCTTGCCCTaGTGTTCTAGAATTGTCAACCTCTGTTCTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SPVDPNLLRGLP*CSRIVNLCSSC Trigger: GCAGGAAGAACAGAGGTTGACAATTCTAGAACAGCAGGGCAAGCCTCGGAGGAGGTTTGGGTCTACTGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS GCA 72 bp | TTTGGGATAGCGTCTCACTCTGTTATCCCCTTGGAGTaGAGTGGCAGGGATCTTGGCTCACTGCAGCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: FGIASHSVIPLE*SGRDLGSLQPQ Trigger: TTGAGGCTGCAGTGAGCCAAGATCCCTGCCACTGCACTCCAAGGGGATAACAGAGTGAGACGCTATCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CCA 72 bp | TTCCAGGGAACAGTTTTTAAGAAAAGCCTTGGGCCTTaGGATCTGGGTTGGGTCCCGGGCTTGGTCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: FQGTVFKKSLGP*DLGWVPGLVLS Trigger: GGACAAGACCAAGCCCGGGACCCAACCCAGATCCCAAGGCCCAAGGCTTTTCTTAAAAACTGTTCCCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS GCA 72 bp | AGTCTTTGCTGTCCTTTGGCCAGATACATCAGCTCTTaGCCTGTGGGTCTTTCCATGGAGCAGCTTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLCCPLARYISS*PVGLSMEQLAS Trigger: GGAAGCAAGCTGCTCCATGGAAAGACCCACAGGGCAAGAGCTGATGTATCTGGCCAAAGGACAGCAAAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433569.1 ENST00000670861.1 |
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| CDS CCA 72 bp | GCTGTCCTTTGGCCAGATACATCAGCTCTTGCCCTGTaGGTCTTTCCATGGAGCAGCTTGCTTCCCTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: AVLWPDTSALAL*VFPWSSLLPLE Trigger: TTCTAAGGGAAGCAAGCTGCTCCATGGAAAGACCCACAGGGCAAGAGCTGATGTATCTGGCCAAAGGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433569.1 ENST00000670861.1 |
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| CDS CAA 72 bp | CGCGCATCCGTGGACACACTTAGGGTCGCCTTTGTTTaGCGCAGTGATTCAAGTTGGGTAACCCTTGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: RASVDTLRVAFV*RSDSSWVTLAQ Trigger: TTGAGCAAGGGTTACCCAACTTGAATCACTGCGCAAAACAAAGGCGACCCTAAGTGTGTCCACGGATGCGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 72 bp | CCTCTTTCGCCAGTAGACCCAAACCTCCTCCGAGGCTaGCCCTGCTGTTCTAGAATTGTCAACCTCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PLSPVDPNLLRG*PCCSRIVNLCS Trigger: AGAACAGAGGTTGACAATTCTAGAACAGCAGGGCAAGCCTCGGAGGAGGTTTGGGTCTACTGGCGAAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 90 bp | GGTCTTTCTCCTCTTTCGCCAGTAGACCCAAACCTCCTCCGAGGCTaGCCCTGCTGTTCTAGAATTGTCAACCTCTGTTCTTCCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GLSPLSPVDPNLLRG*PCCSRIVNLCSSCK Trigger: TTTGCAGGAAGAACAGAGGTTGACAATTCTAGAACAGCAGGGCAAGCCTCGGAGGAGGTTTGGGTCTACTGGCGAAAGAGGAGAAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 90 bp | CCAGATACATCAGCTCTTGCCCTGTGGGTCTTTCCATGGAGCAGCTaGCTTCCCTTAGAACAAGAGCGCTGGATTTTCCTGCGTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: PDTSALALWVFPWSS*LPLEQERWIFLRGF Trigger: AAATCCACGCAGGAAAATCCAGCGCTCTTGTTCTAAGGGAAGCAAGCTGCTCCATGGAAAGACCCACAGGGCAAGAGCTGATGTATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS TCA 72 bp | GTTTCAGTGGGTTTTGAATCCAGGGGGCCTTGCTGTTaGGTATCCTCTAGCTCAGGGTCTCTTCCAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSVGFESRGPCC*VSSSSGSLPKL Trigger: CAGCTTTGGAAGAGACCCTGAGCTAGAGGATACTCAACAGCAAGGCCCCCTGGATTCAAAACCCACTGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CCA 72 bp | TTAGCTGCTGACAGGCCTCAAGTCTTTGCTGTCCTTTaGCCAGATACATCAGCTCTTGCCCTGTGGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LAADRPQVFAVL*PDTSALALWVF Trigger: AAAGACCCACAGGGCAAGAGCTGATGTATCTGGCCAAAGGACAGCAAAGACTTGAGGCCTGTCAGCAGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433569.1 ENST00000670861.1 |
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| CDS CAA 72 bp | AAGTCTTTGCTGTCCTTTGGCCAGATACATCAGCTCTaGCCCTGTGGGTCTTTCCATGGAGCAGCTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KSLLSFGQIHQL*PCGSFHGAACF Trigger: GAAGCAAGCTGCTCCATGGAAAGACCCACAGGGCAAGAGCTGATGTATCTGGCCAAAGGACAGCAAAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433569.1 ENST00000670861.1 |
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| CDS TCA 72 bp | CAGGTGCAATCGTACTACTCATCAGTGCAGGAGTTTTaGCTTGCTCCATTTCCAACCTGTGCCAGTTCACCC | + |
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Preference number: 6 (lower is better) Translates to: QVQSYYSSVQEF*LAPFPTCASSP Trigger: GGGTGAACTGGCACAGGTTGGAAATGGAGCAAGTCAAAACTCCTGCACTGATGAGTAGTACGATTGCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CCA 72 bp | CTTAGGGTCGCCTTTGTTTTGCGCAGTGATTCAAGTTaGGTAACCCTTGCTCAACACTTGGGAAATGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRVAFVLRSDSS*VTLAQHLGNGE Trigger: CTCCCCATTTCCCAAGTGTTGAGCAAGGGTTACCCAACTTGAATCACTGCGCAAAACAAAGGCGACCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 72 bp | TGCAATCGTACTACTCATCAGTGCAGGAGTTTTGACTaGCTCCATTTCCAACCTGTGCCAGTTCACCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CNRTTHQCRSFD*LHFQPVPVHPS Trigger: GGAGGGGTGAACTGGCACAGGTTGGAAATGGAGCAAGTCAAAACTCCTGCACTGATGAGTAGTACGATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 72 bp | CAAACCTCCTCCGAGGCTTGCCCTGCTGTTCTAGAATaGTCAACCTCTGTTCTTCCTGCAAAGAGAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: QTSSEACPAVLE*STSVLPAKRKA Trigger: AGCTTTTCTCTTTGCAGGAAGAACAGAGGTTGACAATTCTAGAACAGCAGGGCAAGCCTCGGAGGAGGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433569.1 |
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| CDS CAA 72 bp | ACAGGTGCAATCGTACTACTCATCAGTGCAGGAGTTTaGACTTGCTCCATTTCCAACCTGTGCCAGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: TGAIVLLISAGV*TCSISNLCQFT Trigger: GGTGAACTGGCACAGGTTGGAAATGGAGCAAGTCAAAACTCCTGCACTGATGAGTAGTACGATTGCACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS GCA 72 bp | TTGGCTATTTACAGGTGCAATCGTACTACTCATCAGTaGAGGAGTTTTGACTTGCTCCATTTCCAACCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LAIYRCNRTTHQ*RSFDLLHFQPV Trigger: CACAGGTTGGAAATGGAGCAAGTCAAAACTCCTGCACTGATGAGTAGTACGATTGCACCTGTAAATAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS GCA 72 bp | TGTTGTCCAGGCTACATTGCTTTGGCTATTTACAGGTaGAATCGTACTACTCATCAGTGCAGGAGTTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: CCPGYIALAIYR*NRTTHQCRSFD Trigger: GTCAAAACTCCTGCACTGATGAGTAGTACGATTGCACCTGTAAATAGCCAAAGCAATGTAGCCTGGACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 90 bp | TCCTTTCTCAGCCTCCCAAATAATTGGGACTACAGGCTATTTGGTTaGATGTTGCAAGAGAAAGGGGAGAGATTTTTCTGGAGCTATGTC | + |
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Preference number: 6 (lower is better) Translates to: SFLSLPNNWDYRLFG*MLQEKGERFFWSYV Trigger: GACATAGCTCCAGAAAAATCTCTCCCCTTTCTCTTGCAACATCAAACCAAATAGCCTGTAGTCCCAATTATTTGGGAGGCTGAGAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CCA 72 bp | GCTTCCCTTAGAACAAGAGCGCTGGATTTTCCTGCGTaGATTTCACTCATTTTTCGAAAGTCATTGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: ASLRTRALDFPA*ISLIFRKSLTS Trigger: TGAAGTCAATGACTTTCGAAAAATGAGTGAAATCCACGCAGGAAAATCCAGCGCTCTTGTTCTAAGGGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 72 bp | AGCCTCCCAAATAATTGGGACTACAGGCTATTTGGTTaGATGTTGCAAGAGAAAGGGGAGAGATTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLPNNWDYRLFG*MLQEKGERFFW Trigger: CCAGAAAAATCTCTCCCCTTTCTCTTGCAACATCAAACCAAATAGCCTGTAGTCCCAATTATTTGGGAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS TCA 72 bp | AGAGAAAGGGGAGAGATTTTTCTGGAGCTATGTCCTTaGCTACATCACACAGTATATTCACTACCTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: RERGEIFLELCP*LHHTVYSLPLA Trigger: AGCAAGAGGTAGTGAATATACTGTGTGATGTAGTCAAGGACATAGCTCCAGAAAAATCTCTCCCCTTTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 72 bp | CAACAAAAACAGATTATCTTATGGTTTCAGTGGGTTTaGAATCCAGGGGGCCTTGCTGTTGAGTATCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: QQKQIILWFQWV*NPGGLAVEYPL Trigger: TAGAGGATACTCAACAGCAAGGCCCCCTGGATTCAAAACCCACTGAAACCATAAGATAATCTGTTTTTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 72 bp | GTCCTTGACTACATCACACAGTATATTCACTACCTCTaGCTGTGTCACAAGTCACTCCAAAACTTAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: VLDYITQYIHYL*LCHKSLQNLMA Trigger: AGCCATTAAGTTTTGGAGTGACTTGTGACACAGCAAGAGGTAGTGAATATACTGTGTGATGTAGTCAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 72 bp | AAGAGAAAGGGGAGAGATTTTTCTGGAGCTATGTCCTaGACTACATCACACAGTATATTCACTACCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: KRKGRDFSGAMS*TTSHSIFTTSC Trigger: GCAAGAGGTAGTGAATATACTGTGTGATGTAGTCAAGGACATAGCTCCAGAAAAATCTCTCCCCTTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 72 bp | TTGACTTCAAACATTTGTGGCTCAAGAGAAAAAGACTaGTTGATGGTTTGTTTCACCATCTTTCCAGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LTSNICGSREKD*LMVCFTIFPVL Trigger: GAGGACTGGAAAGATGGTGAAACAAACCATCAACAAGTCTTTTTCTCTTGAGCCACAAATGTTTGAAGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 72 bp | TTTCCTGCGTGGATTTCACTCATTTTTCGAAAGTCATaGACTTCAAACATTTGTGGCTCAAGAGAAAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: FPAWISLIFRKS*TSNICGSREKD Trigger: GTCTTTTTCTCTTGAGCCACAAATGTTTGAAGTCAATGACTTTCGAAAAATGAGTGAAATCCACGCAGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 90 bp | TGCGTGGATTTCACTCATTTTTCGAAAGTCATTGACTTCAAACATTaGTGGCTCAAGAGAAAAAGACTTGTTGATGGTTTGTTTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: CVDFTHFSKVIDFKH*WLKRKRLVDGLFHH Trigger: ATGGTGAAACAAACCATCAACAAGTCTTTTTCTCTTGAGCCACAAATGTTTGAAGTCAATGACTTTCGAAAAATGAGTGAAATCCACGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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| CDS CAA 72 bp | TTCACTCATTTTTCGAAAGTCATTGACTTCAAACATTaGTGGCTCAAGAGAAAAAGACTTGTTGATGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FTHFSKVIDFKH*WLKRKRLVDGL Trigger: CAAACCATCAACAAGTCTTTTTCTCTTGAGCCACAAATGTTTGAAGTCAATGACTTTCGAAAAATGAGTGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000670861.1 |
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