Pregenerated sensors for LINC00390 (Homo sapiens)
Ensembl gene IDs: ENSG00000226519Ensembl transcript IDs: ENST00000432331.2, ENST00000654658.1, ENST00000655583.1, ENST00000661100.1, ENST00000662947.1, ENST00000664794.1, ENST00000667227.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGCCCAGGTCCCCGGAGGTCCCGACGCCCGGATTCCACAGCCTGTaGGGGTCCCTTGAGCAGAGCGGGACGAGGCCACTGGCACTACGT | + |
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Preference number: 5 (lower is better) Translates to: RPRSPEVPTPGFHSL*GSLEQSGTRPLALR Trigger: ACGTAGTGCCAGTGGCCTCGTCCCGCTCTGCTCAAGGGACCCTCACAGGCTGTGGAATCCGGGCGTCGGGACCTCCGGGGACCTGGGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667227.1 |
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| CDS TCA 90 bp | TGCTCTTTGCTTTGGGTTCATGGTTCATTCCGGGAGGCTGAGAGCTaGGGCTCTGCCCTGGTGGGTTCCCTGCCCTGGAAACTTTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: CSLLWVHGSFREAES*GSALVGSLPWKLSE Trigger: CTCCGAAAGTTTCCAGGGCAGGGAACCCACCAGGGCAGAGCCTCAGCTCTCAGCCTCCCGGAATGAACCATGAACCCAAAGCAAAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655583.1 ENST00000664794.1 |
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| CDS TCA 90 bp | GGAGTTCTGCTCTTTGCTTTGGGTTCATGGTTCATTCCGGGAGGCTaGGAGCTGAGGCTCTGCCCTGGTGGGTTCCCTGCCCTGGAAACT | + |
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Preference number: 5 (lower is better) Translates to: GVLLFALGSWFIPGG*ELRLCPGGFPALET Trigger: AGTTTCCAGGGCAGGGAACCCACCAGGGCAGAGCCTCAGCTCTCAGCCTCCCGGAATGAACCATGAACCCAAAGCAAAGAGCAGAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655583.1 ENST00000664794.1 |
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| CDS GCA 90 bp | CAGTCCTCCCACTGCACAGCTGCCTCTACCTGGCCTGTGCCTTCTTaGGAAAAGCTCTTTGGTGTGGCTGGCCAGACTTCAGAACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: QSSHCTAASTWPVPS*EKLFGVAGQTSELH Trigger: ATGCAGTTCTGAAGTCTGGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGGTAGAGGCAGCTGTGCAGTGGGAGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | TGTCCAGGACAGGCAGGAAACATCGGTACTCCCCCTCTCCTTGCCTaGCCAGGGAAGTTTTCCTGGAGGACAGGTTCACAATGTGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: CPGQAGNIGTPPLLA*PGKFSWRTGSQCGR Trigger: TCTCCCACATTGTGAACCTGTCCTCCAGGAAAACTTCCCTGGGCAGGCAAGGAGAGGGGGAGTACCGATGTTTCCTGCCTGTCCTGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 90 bp | GGAGTTCTGCTCTTTGCTTTGGGTTCATGGTTCATTCCGGGAGGCTaGGAGCTGAGGCTCTGCCCTGGTGGGTTCTGTAGCATCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: GVLLFALGSWFIPGG*ELRLCPGGFCSIHL Trigger: CAAGTGGATGCTACAGAACCCACCAGGGCAGAGCCTCAGCTCTCAGCCTCCCGGAATGAACCATGAACCCAAAGCAAAGAGCAGAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000432331.2 ENST00000661100.1 ENST00000667227.1 |
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| CDS TCA 90 bp | GGAGTTCTGCTCTTTGCTTTGGGTTCATGGTTCATTCCGGGAGGCTaGGAGCTGAGGCTCTGCCCTGGTGGGTTCCTTTGCTCTGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: GVLLFALGSWFIPGG*ELRLCPGGFLCSAV Trigger: TACTGCAGAGCAAAGGAACCCACCAGGGCAGAGCCTCAGCTCTCAGCCTCCCGGAATGAACCATGAACCCAAAGCAAAGAGCAGAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654658.1 |
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| CDS GCA 90 bp | AAACATCACAGTCCTCCCACTGCACAGCTGCCTCTACCTGGCCTGTaGCTTCTTGCGAAAAGCTCTTTGGTGTGGCTGGCCAGACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: KHHSPPTAQLPLPGL*LLAKSSLVWLARLQ Trigger: CTGAAGTCTGGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGGTAGAGGCAGCTGTGCAGTGGGAGGACTGTGATGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | AATGTGTCCAGGACAGGCAGGAAACATCGGTACTCCCCCTCTCCTTaGCTGCCCAGGGAAGTTTTCCTGGAGGACAGGTTCACAATGTGG | + |
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Preference number: 5 (lower is better) Translates to: NVSRTGRKHRYSPSP*LPREVFLEDRFTMW Trigger: CCACATTGTGAACCTGTCCTCCAGGAAAACTTCCCTGGGCAGGCAAGGAGAGGGGGAGTACCGATGTTTCCTGCCTGTCCTGGACACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 90 bp | TGCCCTGGTGGGTTCCCTGCCCTGGAAACTTTCGGAGATGCCTGCTaGTTGTTCTGGTACTGCTGTGCTCGTAACTTCAAAGCAAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: CPGGFPALETFGDAC*LFWYCCARNFKASA Trigger: CGCACTTGCTTTGAAGTTACGAGCACAGCAGTACCAGAACAATCAGCAGGCATCTCCGAAAGTTTCCAGGGCAGGGAACCCACCAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655583.1 ENST00000664794.1 |
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| CDS CCA 90 bp | CACAGCTGCCTCTACCTGGCCTGTGCCTTCTTGCGAAAAGCTCTTTaGTGTGGCTGGCCAGACTTCAGAACTGCATGTTTCAGAAATGCC | + |
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Preference number: 5 (lower is better) Translates to: HSCLYLACAFLRKAL*CGWPDFRTACFRNA Trigger: GGCATTTCTGAAACATGCAGTTCTGAAGTCTGGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGGTAGAGGCAGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CCA 90 bp | CTGCCTCTACCTGGCCTGTGCCTTCTTGCGAAAAGCTCTTTGGTGTaGCTGGCCAGACTTCAGAACTGCATGTTTCAGAAATGCCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: LPLPGLCLLAKSSLV*LARLQNCMFQKCLR Trigger: CCTAAGGCATTTCTGAAACATGCAGTTCTGAAGTCTGGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGGTAGAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CCA 90 bp | TCCTTGTCTGCGGGTGATCCACAGTGCTGTTGGATAGAAAGGCAGTaGGAGAACTTGGTTGTGATTTCCACTGATCTAGCCAGTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SLSAGDPQCCWIERQ*ENLVVISTDLASPQ Trigger: CTGGGGACTGGCTAGATCAGTGGAAATCACAACCAAGTTCTCCCACTGCCTTTCTATCCAACAGCACTGTGGATCACCCGCAGACAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000662947.1 ENST00000664794.1 |
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| CDS TCA 90 bp | TTCCAAAATGCAGAAGGTGAAAGTCATGGTCATGGAGAAGTCAAGTaGCCTGGGAAGAGAATTGGCCATGGCTCCCCAGGTGAGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: FQNAEGESHGHGEVK*PGKRIGHGSPGEEE Trigger: CTCCTCCTCACCTGGGGAGCCATGGCCAATTCTCTTCCCAGGTCACTTGACTTCTCCATGACCATGACTTTCACCTTCTGCATTTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | GGTACTGCTGTGCTCGTAACTTCAAAGCAAGTGCGACAGCCATTCTaGCCAGATTCAGTCCCAACCAGCTTCTGTAGCATCCACTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GTAVLVTSKQVRQPF*PDSVPTSFCSIHLK Trigger: CTTCAAGTGGATGCTACAGAAGCTGGTTGGGACTGAATCTGGGCAGAATGGCTGTCGCACTTGCTTTGAAGTTACGAGCACAGCAGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655583.1 |
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| CDS GCA 90 bp | GGTACTGCTGTGCTCGTAACTTCAAAGCAAGTGCGACAGCCATTCTaGCCAGATTCAGTCCCAACCAGCTTCCTATGTAGCATCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: GTAVLVTSKQVRQPF*PDSVPTSFLCSIHL Trigger: CAAGTGGATGCTACATAGGAAGCTGGTTGGGACTGAATCTGGGCAGAATGGCTGTCGCACTTGCTTTGAAGTTACGAGCACAGCAGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664794.1 |
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| CDS CCA 90 bp | GTGGGGAACAGGACACCATGCGGCCCAGGAATATCCATCCATTTGTaGGCAAAGGGAAATGGAGCACAAAATGGCTACTCATCAAGACAG | + |
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Preference number: 5 (lower is better) Translates to: VGNRTPCGPGISIHL*AKGNGAQNGYSSRQ Trigger: CTGTCTTGATGAGTAGCCATTTTGTGCTCCATTTCCCTTTGCCCACAAATGGATGGATATTCCTGGGCCGCATGGTGTCCTGTTCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | GGAGATTCATCTTTGTCTGTGAAGCTGGAGGTGTCAAAGGAGTTCTaGTCTTTGCTTTGGGTTCATGGTTCATTCCGGGAGGCTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: GDSSLSVKLEVSKEF*SLLWVHGSFREAES Trigger: GCTCTCAGCCTCCCGGAATGAACCATGAACCCAAAGCAAAGAGCAGAACTCCTTTGACACCTCCAGCTTCACAGACAAAGATGAATCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 ENST00000667227.1 |
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| CDS GCA 90 bp | GAGCTGCCAGTGAAAGTCAAAGAAAAAGTGGGGAACAGGACACCATaGGGCCCAGGAATATCCATCCATTTGTGGGCAAAGGGAAATGGA | + |
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Preference number: 5 (lower is better) Translates to: ELPVKVKEKVGNRTP*GPGISIHLWAKGNG Trigger: TCCATTTCCCTTTGCCCACAAATGGATGGATATTCCTGGGCCGCATGGTGTCCTGTTCCCCACTTTTTCTTTGACTTTCACTGGCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | ATGTGGATCAAAACACCTCCTGACAGGCTTGTAGGTCAATTTACATaGGCTCAAATGTGTCCAGGACAGGCAGGAAACATCGGTACTCCC | + |
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Preference number: 5 (lower is better) Translates to: MWIKTPPDRLVGQFT*AQMCPGQAGNIGTP Trigger: GGGAGTACCGATGTTTCCTGCCTGTCCTGGACACATTTGAGCGCATGTAAATTGACCTACAAGCCTGTCAGGAGGTGTTTTGATCCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 90 bp | GGCCAGAGAGCAAGTGCAAGGTTCTTAAACAGTCCTGGTAGGAGCTaGGAAGGCCTCACCTTAAATGGTTACAATGCAAATGGAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: GQRASARFLNSPGRS*EGLTLNGYNANGAE Trigger: TTCTGCTCCATTTGCATTGTAACCATTTAAGGTGAGGCCTTCTCAGCTCCTACCAGGACTGTTTAAGAACCTTGCACTTGCTCTCTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | GTAGCAGGGTCCAAGGCATGCAGCAAGTCCAAACATGCTCTGAGATaGTTCTCTCCTCTCATTTCCCTTAGTTCCATTCAGCAATTATCC | + |
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Preference number: 5 (lower is better) Translates to: VAGSKACSKSKHALR*FSPLISLSSIQQLS Trigger: GGATAATTGCTGAATGGAACTAAGGGAAATGAGAGGAGAGAAGCATCTCAGAGCATGTTTGGACTTGCTGCATGCCTTGGACCCTGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662947.1 ENST00000667227.1 |
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| CDS TCA 90 bp | CACAAAATAAAGGTATTTAAGCACTCTCACAGCACACCGAGACAATaGGCAAACCCACTTGACGGGGGTCAAGTGCCTGGAAAGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: HKIKVFKHSHSTPRQ*ANPLDGGQVPGKSE Trigger: TTCTGACTTTCCAGGCACTTGACCCCCGTCAAGTGGGTTTGCTCATTGTCTCGGTGTGCTGTGAGAGTGCTTAAATACCTTTATTTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | ACCCTTCAACCTCGTTCATGGAACCAAGCTCAAGCCTCCCTCCCCTaGTCGCAGTATAAATTGAACAGAGAAGTATCAATGAGTATCCAA | + |
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Preference number: 5 (lower is better) Translates to: TLQPRSWNQAQASLP*SQYKLNREVSMSIQ Trigger: TTGGATACTCATTGATACTTCTCTGTTCAATTTATACTGCGAGCAGGGGAGGGAGGCTTGAGCTTGGTTCCATGAACGAGGTTGAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | AAGGGCTCAATATTCAGTTATCAGTGTGTAGCAGGGTCCAAGGCATaGAGCAAGTCCAAACATGCTCTGAGATGCTTCTCTCCTCTCATT | + |
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Preference number: 5 (lower is better) Translates to: KGSIFSYQCVAGSKA*SKSKHALRCFSPLI Trigger: AATGAGAGGAGAGAAGCATCTCAGAGCATGTTTGGACTTGCTGCATGCCTTGGACCCTGCTACACACTGATAACTGAATATTGAGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662947.1 ENST00000667227.1 |
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| CDS CCA 90 bp | TTTTTGGTGATTCCATCCTTGTCTGCGGGTGATCCACAGTGCTGTTaGATAGAAAGGCAGTGGGAGAACTTGGTTGTGATTTCCACTGAT | + |
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Preference number: 5 (lower is better) Translates to: FLVIPSLSAGDPQCC*IERQWENLVVISTD Trigger: ATCAGTGGAAATCACAACCAAGTTCTCCCACTGCCTTTCTATCCAACAGCACTGTGGATCACCCGCAGACAAGGATGGAATCACCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000662947.1 ENST00000664794.1 |
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| CDS TCA 90 bp | CTATCCCTCCCTCCAAGGACCTATTTGCTTGCCTTGCTGTGGCATTaGATATTATCACACATAAGGCTTATAAAGTGGGGAGAAGACACC | + |
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Preference number: 5 (lower is better) Translates to: LSLPPRTYLLALLWH*ILSHIRLIKWGEDT Trigger: GGTGTCTTCTCCCCACTTTATAAGCCTTATGTGTGATAATATTCAATGCCACAGCAAGGCAAGCAAATAGGTCCTTGGAGGGAGGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 90 bp | GTCAAGTGCCTGGAAAGTCAGAAGGAAGCTGATAGTAAAGGATTTTaGATGTCTGGTTCAGGACAATGGGTTTTATCCTGCTATCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: VKCLESQKEADSKGF*MSGSGQWVLSCYQW Trigger: CCACTGATAGCAGGATAAAACCCATTGTCCTGAACCAGACATTCAAAATCCTTTACTATCAGCTTCCTTCTGACTTTCCAGGCACTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CCA 90 bp | GTACTCTTGGAGGAAAGGAAACAAACACAAAGCTTGCAAACAGGATaGCAAAACACTCTCGAGTCAAAGACCCTTGTTTATCAGCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: VLLEERKQTQSLQTG*QNTLESKTLVYQLK Trigger: CTTGAGCTGATAAACAAGGGTCTTTGACTCGAGAGTGTTTTGCCATCCTGTTTGCAAGCTTTGTGTTTGTTTCCTTTCCTCCAAGAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS CCA 90 bp | GCCTCTCACATATTTGTAAATGTGACAGGCACCAGTAGAGATCATTaGTTAATGAGTGGAGGTTGGAGTGGAGATAGGGTTCCATTAATC | + |
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Preference number: 5 (lower is better) Translates to: ASHIFVNVTGTSRDH*LMSGGWSGDRVPLI Trigger: GATTAATGGAACCCTATCTCCACTCCAACCTCCACTCATTAACCAATGATCTCTACTGGTGCCTGTCACATTTACAAATATGTGAGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS GCA 90 bp | GCATTTGTTACCATCGATGAACCCACATTGGCTCATTCATTTTTATaGTGTATAAAACCATCTGGGATCGTGTGTTTGCCCAGTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: AFVTIDEPTLAHSFL*CIKPSGIVCLPSFS Trigger: GCTGAAACTGGGCAAACACACGATCCCAGATGGTTTTATACAGCATAAAAATGAATGAGCCAATGTGGGTTCATCGATGGTAACAAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 90 bp | CATTCATTCTGTTCTCAACATGCTGCAGTAAAGTTCACTTACCCCTaGACTTTGACCATTCTAGCACATTTCAGCGTTTGCATGCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: HSFCSQHAAVKFTYP*TLTILAHFSVCMLK Trigger: TTTGAGCATGCAAACGCTGAAATGTGCTAGAATGGTCAAAGTTCAGGGGTAAGTGAACTTTACTGCAGCATGTTGAGAACAGAATGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | AAAGTCTCTGCTTCTTTGTCAGCATTCATTCTGTTCTCAACATGCTaGAGTAAAGTTCACTTACCCCTGAACTTTGACCATTCTAGCACA | + |
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Preference number: 5 (lower is better) Translates to: KVSASLSAFILFSTC*SKVHLPLNFDHSST Trigger: TGTGCTAGAATGGTCAAAGTTCAGGGGTAAGTGAACTTTACTGCAGCATGTTGAGAACAGAATGAATGCTGACAAAGAAGCAGAGACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 90 bp | AAGCTTCTTAGCATTCATGAGTATATTGTTCCAAAATGCAGAAGGTaGAAGTCATGGTCATGGAGAAGTCAAGTGACCTGGGAAGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: KLLSIHEYIVPKCRR*KSWSWRSQVTWEEN Trigger: ATTCTCTTCCCAGGTCACTTGACTTCTCCATGACCATGACTTTCACCTTCTGCATTTTGGAACAATATACTCATGAATGCTAAGAAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 90 bp | ACAGGTTCACAATGTGGGAGACAAAATTGTAAAACTATATGCAAATaGGCTTGGACACAGATTATAGCAGAGAAACAACACCTCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TGSQCGRQNCKTICK*AWTQIIAEKQHLCA Trigger: AGCACAGAGGTGTTGTTTCTCTGCTATAATCTGTGTCCAAGCGCATTTGCATATAGTTTTACAATTTTGTCTCCCACATTGTGAACCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CCA 90 bp | TCACAATGTGGGAGACAAAATTGTAAAACTATATGCAAATGCGCTTaGACACAGATTATAGCAGAGAAACAACACCTCTGTGCTATCAAG | + |
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Preference number: 5 (lower is better) Translates to: SQCGRQNCKTICKCA*TQIIAEKQHLCAIK Trigger: CTTGATAGCACAGAGGTGTTGTTTCTCTGCTATAATCTGTGTCCAAGCGCATTTGCATATAGTTTTACAATTTTGTCTCCCACATTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 90 bp | TCAAAGGGCTTCCTCATTCTAATCCATAAAGAAGTTCAGTTGAAGTaGATAGAAGTTCCTCCATGGTCTGAGATTGTAACATTACTTTTT | + |
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Preference number: 5 (lower is better) Translates to: SKGFLILIHKEVQLK*IEVPPWSEIVTLLF Trigger: AAAAAGTAATGTTACAATCTCAGACCATGGAGGAACTTCTATTCACTTCAACTGAACTTCTTTATGGATTAGAATGAGGAAGCCCTTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS TCA 72 bp | TCCCCGGAGGTCCCGACGCCCGGATTCCACAGCCTGTaGGGGTCCCTTGAGCAGAGCGGGACGAGGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: SPEVPTPGFHSL*GSLEQSGTRPL Trigger: CAGTGGCCTCGTCCCGCTCTGCTCAAGGGACCCTCACAGGCTGTGGAATCCGGGCGTCGGGACCTCCGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667227.1 |
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| CDS CAA 90 bp | CCCCGGAGGTCCCGACGCCCGGATTCCACAGCCTGTGAGGGTCCCTaGAGCAGAGCGGGACGAGGCCACTGGCACTACGTCGTGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: PRRSRRPDSTACEGP*SRAGRGHWHYVVTS Trigger: TGAAGTCACGACGTAGTGCCAGTGGCCTCGTCCCGCTCTGCTCAAGGGACCCTCACAGGCTGTGGAATCCGGGCGTCGGGACCTCCGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667227.1 |
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| CDS TCA 72 bp | CTTTGGGTTCATGGTTCATTCCGGGAGGCTGAGAGCTaGGGCTCTGCCCTGGTGGGTTCCCTGCCCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LWVHGSFREAES*GSALVGSLPWK Trigger: TTTCCAGGGCAGGGAACCCACCAGGGCAGAGCCTCAGCTCTCAGCCTCCCGGAATGAACCATGAACCCAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655583.1 ENST00000664794.1 |
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| CDS GCA 72 bp | AGTCCTCCCACTGCACAGCTGCCTCTACCTGGCCTGTaGCTTCTTGCGAAAAGCTCTTTGGTGTGGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPPTAQLPLPGL*LLAKSSLVWLA Trigger: GGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGGTAGAGGCAGCTGTGCAGTGGGAGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 72 bp | TGTGATGCTGCTCACACTCATGGTGCTCTCTCCTCCTaGCCAACAGACCAAGGCCTGGCTCAGGTCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: CDAAHTHGALSS*PTDQGLAQVPP Trigger: TGGTGGGACCTGAGCCAGGCCTTGGTCTGTTGGGCAGGAGGAGAGAGCACCATGAGTGTGAGCAGCATCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 72 bp | CTTTGGGTTCATGGTTCATTCCGGGAGGCTGAGAGCTaGGGCTCTGCCCTGGTGGGTTCCTTTGCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LWVHGSFREAES*GSALVGSFALQ Trigger: CTGCAGAGCAAAGGAACCCACCAGGGCAGAGCCTCAGCTCTCAGCCTCCCGGAATGAACCATGAACCCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654658.1 |
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| CDS GCA 72 bp | AGGACAGGCAGGAAACATCGGTACTCCCCCTCTCCTTaGCTGCCCAGGGAAGTTTTCCTGGAGGACAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RTGRKHRYSPSP*LPREVFLEDRF Trigger: GAACCTGTCCTCCAGGAAAACTTCCCTGGGCAGGCAAGGAGAGGGGGAGTACCGATGTTTCCTGCCTGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS CAA 72 bp | CAGGACAGGCAGGAAACATCGGTACTCCCCCTCTCCTaGCCTGCCCAGGGAAGTTTTCCTGGAGGACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QDRQETSVLPLS*PAQGSFPGGQV Trigger: AACCTGTCCTCCAGGAAAACTTCCCTGGGCAGGCAAGGAGAGGGGGAGTACCGATGTTTCCTGCCTGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS TCA 72 bp | CTTTGGGTTCATGGTTCATTCCGGGAGGCTGAGAGCTaGGGCTCTGCCCTGGTGGGTTCTGTAGCATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LWVHGSFREAES*GSALVGSVAST Trigger: AGTGGATGCTACAGAACCCACCAGGGCAGAGCCTCAGCTCTCAGCCTCCCGGAATGAACCATGAACCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000432331.2 ENST00000661100.1 ENST00000667227.1 |
||
| CDS GCA 72 bp | CAGGCAGGAAACATCGGTACTCCCCCTCTCCTTGCCTaGCCAGGGAAGTTTTCCTGGAGGACAGGTTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: QAGNIGTPPLLA*PGKFSWRTGSQ Trigger: TTGTGAACCTGTCCTCCAGGAAAACTTCCCTGGGCAGGCAAGGAGAGGGGGAGTACCGATGTTTCCTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS CAA 90 bp | AAATGTGTCCAGGACAGGCAGGAAACATCGGTACTCCCCCTCTCCTaGCCTGCCCAGGGAAGTTTTCCTGGAGGACAGGTTCACAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: KCVQDRQETSVLPLS*PAQGSFPGGQVHNV Trigger: CACATTGTGAACCTGTCCTCCAGGAAAACTTCCCTGGGCAGGCAAGGAGAGGGGGAGTACCGATGTTTCCTGCCTGTCCTGGACACATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS TCA 72 bp | CTCTCACAGCACACCGAGACAATGAGCAAACCCACTTaGCGGGGGTCAAGTGCCTGGAAAGTCAGAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSQHTETMSKPT*RGSSAWKVRRK Trigger: CTTCCTTCTGACTTTCCAGGCACTTGACCCCCGTCAAGTGGGTTTGCTCATTGTCTCGGTGTGCTGTGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS CAA 90 bp | GCACAGCTGCCTCTACCTGGCCTGTGCCTTCTTGCGAAAAGCTCTTaGGTGTGGCTGGCCAGACTTCAGAACTGCATGTTTCAGAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: AQLPLPGLCLLAKSS*VWLARLQNCMFQKC Trigger: GCATTTCTGAAACATGCAGTTCTGAAGTCTGGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGGTAGAGGCAGCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS CCA 72 bp | CTCTACCTGGCCTGTGCCTTCTTGCGAAAAGCTCTTTaGTGTGGCTGGCCAGACTTCAGAACTGCATGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LYLACAFLRKAL*CGWPDFRTACF Trigger: GAAACATGCAGTTCTGAAGTCTGGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGGTAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CAA 72 bp | CCTCTACCTGGCCTGTGCCTTCTTGCGAAAAGCTCTTaGGTGTGGCTGGCCAGACTTCAGAACTGCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLPGLCLLAKSS*VWLARLQNCMF Trigger: AAACATGCAGTTCTGAAGTCTGGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGGTAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS CAA 90 bp | GCGGGTGATCCACAGTGCTGTTGGATAGAAAGGCAGTGGGAGAACTaGGTTGTGATTTCCACTGATCTAGCCAGTCCCCAGCTAAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGDPQCCWIERQWEN*VVISTDLASPQLKA Trigger: GGCTTTTAGCTGGGGACTGGCTAGATCAGTGGAAATCACAACCAAGTTCTCCCACTGCCTTTCTATCCAACAGCACTGTGGATCACCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000662947.1 ENST00000664794.1 |
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| CDS TCA 72 bp | AAGGTATTTAAGCACTCTCACAGCACACCGAGACAATaGGCAAACCCACTTGACGGGGGTCAAGTGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KVFKHSHSTPRQ*ANPLDGGQVPG Trigger: TCCAGGCACTTGACCCCCGTCAAGTGGGTTTGCTCATTGTCTCGGTGTGCTGTGAGAGTGCTTAAATACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS TCA 72 bp | GGGTTCCCTGCCCTGGAAACTTTCGGAGATGCCTGCTaGTTGTTCTGGTACTGCTGTGCTCGTAACTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GFPALETFGDAC*LFWYCCARNFK Trigger: TTTGAAGTTACGAGCACAGCAGTACCAGAACAATCAGCAGGCATCTCCGAAAGTTTCCAGGGCAGGGAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655583.1 ENST00000664794.1 |
||
| CDS GCA 72 bp | GTGCTCGTAACTTCAAAGCAAGTGCGACAGCCATTCTaGCCAGATTCAGTCCCAACCAGCTTCCTATGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLVTSKQVRQPF*PDSVPTSFLCS Trigger: GCTACATAGGAAGCTGGTTGGGACTGAATCTGGGCAGAATGGCTGTCGCACTTGCTTTGAAGTTACGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664794.1 |
||
| CDS GCA 72 bp | CTTCCTCTTTATGACAGAGTCTGGCCTGTGCCTTCTTaGGAAAAGCTCTTTGGTGTGGCTGGCCAGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLYDRVWPVPS*EKLFGVAGQTS Trigger: TGAAGTCTGGCCAGCCACACCAAAGAGCTTTTCGCAAGAAGGCACAGGCCAGACTCTGTCATAAAGAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667227.1 |
||
| CDS CCA 72 bp | GCGGGTGATCCACAGTGCTGTTGGATAGAAAGGCAGTaGGAGAACTTGGTTGTGATTTCCACTGATCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGDPQCCWIERQ*ENLVVISTDLA Trigger: GGCTAGATCAGTGGAAATCACAACCAAGTTCTCCCACTGCCTTTCTATCCAACAGCACTGTGGATCACCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000662947.1 ENST00000664794.1 |
||
| CDS CAA 72 bp | TCTGTGAAGCTGGAGGTGTCAAAGGAGTTCTGCTCTTaGCTTTGGGTTCATGGTTCATTCCGGGAGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SVKLEVSKEFCS*LWVHGSFREAE Trigger: CTCAGCCTCCCGGAATGAACCATGAACCCAAAGCAAAGAGCAGAACTCCTTTGACACCTCCAGCTTCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 ENST00000667227.1 |
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| CDS TCA 72 bp | TGCCCTGGTGGGTTCCTTTGCTCTGCAGTAAATAGATaGGTCACAGTTGGTCCTAGCAGGTCAAGGAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: CPGGFLCSAVNR*VTVGPSRSRNK Trigger: CTTGTTCCTTGACCTGCTAGGACCAACTGTGACTCATCTATTTACTGCAGAGCAAAGGAACCCACCAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654658.1 |
||
| CDS CAA 72 bp | AACAGGACACCATGCGGCCCAGGAATATCCATCCATTaGTGGGCAAAGGGAAATGGAGCACAAAATGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: NRTPCGPGISIH*WAKGNGAQNGY Trigger: GTAGCCATTTTGTGCTCCATTTCCCTTTGCCCACAAATGGATGGATATTCCTGGGCCGCATGGTGTCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS CAA 90 bp | TATTTAAGCACTCTCACAGCACACCGAGACAATGAGCAAACCCACTaGACGGGGGTCAAGTGCCTGGAAAGTCAGAAGGAAGCTGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: YLSTLTAHRDNEQTH*TGVKCLESQKEADS Trigger: ACTATCAGCTTCCTTCTGACTTTCCAGGCACTTGACCCCCGTCAAGTGGGTTTGCTCATTGTCTCGGTGTGCTGTGAGAGTGCTTAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CAA 90 bp | GGGAAATGGAGCACAAAATGGCTACTCATCAAGACAGGTAGCCCTTaGCAGTCTCCATCTATGTGGAGACTGAGCTTCCAGTCACAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GKWSTKWLLIKTGSP*QSPSMWRLSFQSQY Trigger: GTACTGTGACTGGAAGCTCAGTCTCCACATAGATGGAGACTGCAAAGGGCTACCTGTCTTGATGAGTAGCCATTTTGTGCTCCATTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CAA 90 bp | AAAGTGGGGAACAGGACACCATGCGGCCCAGGAATATCCATCCATTaGTGGGCAAAGGGAAATGGAGCACAAAATGGCTACTCATCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KVGNRTPCGPGISIH*WAKGNGAQNGYSSR Trigger: TCTTGATGAGTAGCCATTTTGTGCTCCATTTCCCTTTGCCCACAAATGGATGGATATTCCTGGGCCGCATGGTGTCCTGTTCCCCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
||
| CDS GCA 72 bp | TCTTTGTCTGTGAAGCTGGAGGTGTCAAAGGAGTTCTaGTCTTTGCTTTGGGTTCATGGTTCATTCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSVKLEVSKEF*SLLWVHGSFRE Trigger: CTCCCGGAATGAACCATGAACCCAAAGCAAAGAGCAGAACTCCTTTGACACCTCCAGCTTCACAGACAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 ENST00000667227.1 |
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| CDS GCA 72 bp | CCTCGTTCATGGAACCAAGCTCAAGCCTCCCTCCCCTaGTCGCAGTATAAATTGAACAGAGAAGTATCAATG | + |
|
Preference number: 6 (lower is better) Translates to: PRSWNQAQASLP*SQYKLNREVSM Trigger: CATTGATACTTCTCTGTTCAATTTATACTGCGAGCAGGGGAGGGAGGCTTGAGCTTGGTTCCATGAACGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 72 bp | GTGAAAGTCAAAGAAAAAGTGGGGAACAGGACACCATaGGGCCCAGGAATATCCATCCATTTGTGGGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VKVKEKVGNRTP*GPGISIHLWAK Trigger: CTTTGCCCACAAATGGATGGATATTCCTGGGCCGCATGGTGTCCTGTTCCCCACTTTTTCTTTGACTTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CCA 72 bp | ATTCCATCCTTGTCTGCGGGTGATCCACAGTGCTGTTaGATAGAAAGGCAGTGGGAGAACTTGGTTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: IPSLSAGDPQCC*IERQWENLVVI Trigger: AATCACAACCAAGTTCTCCCACTGCCTTTCTATCCAACAGCACTGTGGATCACCCGCAGACAAGGATGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000662947.1 ENST00000664794.1 |
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| CDS CCA 72 bp | GTGAGCACACACAGGGTGTTTAGGAAGTTGTATGCATaGCCATCTGAGGCTTTCTTCCCTTTTCTAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSTHRVFRKLYA*PSEAFFPFLVE Trigger: CTCCACTAGAAAAGGGAAGAAAGCCTCAGATGGCCATGCATACAACTTCCTAAACACCCTGTGTGTGCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS CAA 72 bp | AGCACAAAATGGCTACTCATCAAGACAGGTAGCCCTTaGCAGTCTCCATCTATGTGGAGACTGAGCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: STKWLLIKTGSP*QSPSMWRLSFQ Trigger: CTGGAAGCTCAGTCTCCACATAGATGGAGACTGCAAAGGGCTACCTGTCTTGATGAGTAGCCATTTTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 72 bp | AGAAAGGCAGTGGGAGAACTTGGTTGTGATTTCCACTaGTCTAGCCAGTCCCCAGCTAAAAGCCATCGAATT | + |
|
Preference number: 6 (lower is better) Translates to: RKAVGELGCDFH*SSQSPAKSHRI Trigger: AATTCGATGGCTTTTAGCTGGGGACTGGCTAGATCAGTGGAAATCACAACCAAGTTCTCCCACTGCCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000662947.1 ENST00000664794.1 |
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| CDS GCA 72 bp | AAAACACCTCCTGACAGGCTTGTAGGTCAATTTACATaGGCTCAAATGTGTCCAGGACAGGCAGGAAACATC | + |
|
Preference number: 6 (lower is better) Translates to: KTPPDRLVGQFT*AQMCPGQAGNI Trigger: GATGTTTCCTGCCTGTCCTGGACACATTTGAGCGCATGTAAATTGACCTACAAGCCTGTCAGGAGGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS GCA 72 bp | TCCAAGGCATGCAGCAAGTCCAAACATGCTCTGAGATaGTTCTCTCCTCTCATTTCCCTTAGTTCCATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SKACSKSKHALR*FSPLISLSSIQ Trigger: CTGAATGGAACTAAGGGAAATGAGAGGAGAGAAGCATCTCAGAGCATGTTTGGACTTGCTGCATGCCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662947.1 ENST00000667227.1 |
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| CDS CCA 72 bp | CCCAGGAATATCCATCCATTTGTGGGCAAAGGGAAATaGAGCACAAAATGGCTACTCATCAAGACAGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRNIHPFVGKGK*STKWLLIKTGS Trigger: GCTACCTGTCTTGATGAGTAGCCATTTTGTGCTCCATTTCCCTTTGCCCACAAATGGATGGATATTCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CCA 72 bp | ACTGGGCTGTCAAGCCCAGTTGATTATTCCAGATTGTaGGGGAGAAGGAGGTCTTTACTTCCAAGAATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TGLSSPVDYSRL*GRRRSLLPRIV Trigger: GACAATTCTTGGAAGTAAAGACCTCCTTCTCCCCCACAATCTGGAATAATCAACTGGGCTTGACAGCCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS CAA 72 bp | GCAACTGGGCTGTCAAGCCCAGTTGATTATTCCAGATaGTGGGGGAGAAGGAGGTCTTTACTTCCAAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: ATGLSSPVDYSR*WGRRRSLLPRI Trigger: AATTCTTGGAAGTAAAGACCTCCTTCTCCCCCACAATCTGGAATAATCAACTGGGCTTGACAGCCCAGTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS CAA 90 bp | GCTATCCCTCCCTCCAAGGACCTATTTGCTTGCCTTGCTGTGGCATaGAATATTATCACACATAAGGCTTATAAAGTGGGGAGAAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: AIPPSKDLFACLAVA*NIITHKAYKVGRRH Trigger: GTGTCTTCTCCCCACTTTATAAGCCTTATGTGTGATAATATTCAATGCCACAGCAAGGCAAGCAAATAGGTCCTTGGAGGGAGGGATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 72 bp | ATTATACTTTTTGGTGATTCCATCCTTGTCTGCGGGTaGTCCACAGTGCTGTTGGATAGAAAGGCAGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IILFGDSILVCG*STVLLDRKAVG Trigger: TCCCACTGCCTTTCTATCCAACAGCACTGTGGATCACCCGCAGACAAGGATGGAATCACCAAAAAGTATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000662947.1 ENST00000664794.1 |
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| CDS GCA 72 bp | CCTGTCTTGCCTCCCTCATGTCTATGTCTAACTACCTaGAACAAGAAGATAAAACGAGACCCCCAATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PVLPPSCLCLTT*NKKIKRDPQCL Trigger: AAGACATTGGGGGTCTCGTTTTATCTTCTTGTTGCAGGTAGTTAGACATAGACATGAGGGAGGCAAGACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS CAA 72 bp | CCACATACCCCCTCACACACATACAGAGTGATGCATTaGTTACCATCGATGAACCCACATTGGCTCATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PHTPSHTYRVMH*LPSMNPHWLIH Trigger: ATGAATGAGCCAATGTGGGTTCATCGATGGTAACAAATGCATCACTCTGTATGTGTGTGAGGGGGTATGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 72 bp | TCGAATTCAGCTGCACTTTCTTTGAGTCCCAGGAAGTaGGTGTTTGAGTGGGAGAAAAGCTACAGCAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SNSAALSLSPRK*VFEWEKSYSSN Trigger: ATTACTGCTGTAGCTTTTCTCCCACTCAAACACTCACTTCCTGGGACTCAAAGAAAGTGCAGCTGAATTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661100.1 |
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| CDS TCA 72 bp | TTTCCCTTAGTTCCATTCAGCAATTATCCAAGAACCTaGTGGCTTCCTCTTTATGACAGAGTCTGGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPLVPFSNYPRT*WLPLYDRVWPV Trigger: CACAGGCCAGACTCTGTCATAAAGAGGAAGCCATCAGGTTCTTGGATAATTGCTGAATGGAACTAAGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667227.1 |
||
| CDS GCA 72 bp | ATGAAACACAGCTACCATTTGTTGAGATCCCTTCTGTaGCAAACTCTAAATGCCCTTCTGCTGTCATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: MKHSYHLLRSLL*QTLNALLLSCH Trigger: GTGACATGACAGCAGAAGGGCATTTAGAGTTTGGCACAGAAGGGATCTCAACAAATGGTAGCTGTGTTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CCA 72 bp | CTGAGAAGGCCTCACCTTAAATGGTTACAATGCAAATaGAGCAGAAGGAATTTGTGTTCAAGCCCTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LRRPHLKWLQCK*SRRNLCSSPAF Trigger: AAAGGCAGGGCTTGAACACAAATTCCTTCTGCTCCATTTGCATTGTAACCATTTAAGGTGAGGCCTTCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CAA 72 bp | ACTGCATGTTTCAGAAATGCCTTAGGAGATTCATCTTaGTCTGTGAAGCTGGAGGTGTCAAAGGAGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TACFRNALGDSS*SVKLEVSKEFC Trigger: GCAGAACTCCTTTGACACCTCCAGCTTCACAGACAAAGATGAATCTCCTAAGGCATTTCTGAAACATGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 ENST00000667227.1 |
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| CDS CAA 90 bp | GACTTCAGAACTGCATGTTTCAGAAATGCCTTAGGAGATTCATCTTaGTCTGTGAAGCTGGAGGTGTCAAAGGAGTTCTGCTCTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: DFRTACFRNALGDSS*SVKLEVSKEFCSLL Trigger: AAGCAAAGAGCAGAACTCCTTTGACACCTCCAGCTTCACAGACAAAGATGAATCTCCTAAGGCATTTCTGAAACATGCAGTTCTGAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 ENST00000667227.1 |
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| CDS CAA 90 bp | AGAGAGTTCCCACATACCCCCTCACACACATACAGAGTGATGCATTaGTTACCATCGATGAACCCACATTGGCTCATTCATTTTTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: REFPHTPSHTYRVMH*LPSMNPHWLIHFYA Trigger: AGCATAAAAATGAATGAGCCAATGTGGGTTCATCGATGGTAACAAATGCATCACTCTGTATGTGTGTGAGGGGGTATGTGGGAACTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000661100.1 ENST00000664794.1 |
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| CDS CCA 72 bp | TCACAAACTCTAGGCCATAGTTCTCAATGTGTGGTTTaGGGCCATATGAGGAGTAAGAAAATGTACTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQTLGHSSQCVV*GHMRSKKMYSW Trigger: CCAAGAGTACATTTTCTTACTCCTCATATGGCCCCAAACCACACATTGAGAACTATGGCCTAGAGTTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662947.1 |
||
| CDS TCA 72 bp | AGCATTCATGAGTATATTGTTCCAAAATGCAGAAGGTaGAAGTCATGGTCATGGAGAAGTCAAGTGACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SIHEYIVPKCRR*KSWSWRSQVTW Trigger: CCAGGTCACTTGACTTCTCCATGACCATGACTTTCACCTTCTGCATTTTGGAACAATATACTCATGAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 72 bp | TTTCCCTTAGTTCCATTCAGCAATTATCCAAGAACCTaGTGGCTTCCTCTTTATGACAGAGTTGTAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: FPLVPFSNYPRT*WLPLYDRVVAS Trigger: GGATGCTACAACTCTGTCATAAAGAGGAAGCCATCAGGTTCTTGGATAATTGCTGAATGGAACTAAGGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS TCA 72 bp | TCTCTTAATGCGTATGCCCAGGAAGTTGCTTCTCCCTaGCATCGGCATTCAATGAACACTTTAATGTTAACA | + |
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Preference number: 6 (lower is better) Translates to: SLNAYAQEVASP*HRHSMNTLMLT Trigger: TGTTAACATTAAAGTGTTCATTGAATGCCGATGTCAGGGAGAAGCAACTTCCTGGGCATACGCATTAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS TCA 72 bp | GGAAAGAACACTTGGAAGAACGTGAAGTGGGTGATGTaGAGAACAAGACTTAGATTATTCCAGATTGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GKNTWKNVKWVM*RTRLRLFQIVG Trigger: ACCCACAATCTGGAATAATCTAAGTCTTGTTCTTCACATCACCCACTTCACGTTCTTCCAAGTGTTCTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662947.1 |
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| CDS CAA 72 bp | TTTTTATGCTGTATAAAACCATCTGGGATCGTGTGTTaGCCCAGTTTCAGCTACCTTGTGTTAAGAGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FLCCIKPSGIVC*PSFSYLVLRVL Trigger: GAGGACTCTTAACACAAGGTAGCTGAAACTGGGCAAACACACGATCCCAGATGGTTTTATACAGCATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CAA 90 bp | GCACAGGCAGAAAGAAACAAAAGCTTCTTAGCATTCATGAGTATATaGTTCCAAAATGCAGAAGGTGAAAGTCATGGTCATGGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: AQAERNKSFLAFMSI*FQNAEGESHGHGEV Trigger: GACTTCTCCATGACCATGACTTTCACCTTCTGCATTTTGGAACAATATACTCATGAATGCTAAGAAGCTTTTGTTTCTTTCTGCCTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS TCA 72 bp | AAGATGCAGAAAAGGATCCAAACATCAGTTCTCAAATaGACGATGAAACACAGCTACCATTTGTTGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: KMQKRIQTSVLK*TMKHSYHLLRS Trigger: GGATCTCAACAAATGGTAGCTGTGTTTCATCGTTCATTTGAGAACTGATGTTTGGATCCTTTTCTGCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000432331.2 ENST00000654658.1 ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CAA 72 bp | CCCCTGAACTTTGACCATTCTAGCACATTTCAGCGTTaGCATGCTCAAAACCAAGCAATTAACTTTAATATG | + |
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Preference number: 6 (lower is better) Translates to: PLNFDHSSTFQR*HAQNQAINFNM Trigger: CATATTAAAGTTAATTGCTTGGTTTTGAGCATGCAAACGCTGAAATGTGCTAGAATGGTCAAAGTTCAGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655583.1 ENST00000661100.1 ENST00000664794.1 |
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| CDS CAA 72 bp | CAGAGTGATGCATTTGTTACCATCGATGAACCCACATaGGCTCATTCATTTTTATGCTGTATAAAACCATCT | + |
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Preference number: 6 (lower is better) Translates to: QSDAFVTIDEPT*AHSFLCCIKPS Trigger: AGATGGTTTTATACAGCATAAAAATGAATGAGCCAATGTGGGTTCATCGATGGTAACAAATGCATCACTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000661100.1 ENST00000664794.1 |
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