Pregenerated sensors for LINC00385 (Homo sapiens)
Ensembl gene IDs: ENSG00000232643Ensembl transcript IDs: ENST00000435044.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GGGCGGGAGCTGGCGTTTCAAGCACCGCTGCCCACCCGAGGGATGTaGAGGGTAGCAACAGCCCACGCCGGCGGTGGGGAGCAGCCTGGT | + |
Preference number: 5 (lower is better) Translates to: GRELAFQAPLPTRGM*RVATAHAGGGEQPG Trigger: ACCAGGCTGCTCCCCACCGCCGGCGTGGGCTGTTGCTACCCTGCACATCCCTCGGGTGGGCAGCGGTGCTTGAAACGCCAGCTCCCGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | GCCCACCCGAGGGATGTGCAGGGTAGCAACAGCCCACGCCGGCGGTaGGGAGCAGCCTGGTCACCCACAGGAGCTTGTGAGGCCCGAGGA | + |
Preference number: 5 (lower is better) Translates to: AHPRDVQGSNSPRRR*GAAWSPTGACEARG Trigger: TCCTCGGGCCTCACAAGCTCCTGTGGGTGACCAGGCTGCTCCCCACCGCCGGCGTGGGCTGTTGCTACCCTGCACATCCCTCGGGTGGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 90 bp | CCTCTAGCAGACGGCCCACTGAACCGTGAGCGCGGTCCTGCTGACTaGGGGGCTCTGCGCAGCCTCACGGCCTCGCTGCGCTCTCAAGGC | + |
Preference number: 5 (lower is better) Translates to: PLADGPLNRERGPAD*GALRSLTASLRSQG Trigger: GCCTTGAGAGCGCAGCGAGGCCGTGAGGCTGCGCAGAGCCCCTCAGTCAGCAGGACCGCGCTCACGGTTCAGTGGGCCGTCTGCTAGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | GATGTGCAGGGTAGCAACAGCCCACGCCGGCGGTGGGGAGCAGCCTaGTCACCCACAGGAGCTTGTGAGGCCCGAGGAGTGTCCGTGTGG | + |
Preference number: 5 (lower is better) Translates to: DVQGSNSPRRRWGAA*SPTGACEARGVSVW Trigger: CCACACGGACACTCCTCGGGCCTCACAAGCTCCTGTGGGTGACCAGGCTGCTCCCCACCGCCGGCGTGGGCTGTTGCTACCCTGCACATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | GCTCTGCGCAGCCTCACGGCCTCGCTGCGCTCTCAAGGCCGCTCGTaGTTGTGTGGAGATCACAGCAATGGGGGCGAGAGTGGACGCCGG | + |
Preference number: 5 (lower is better) Translates to: ALRSLTASLRSQGRS*LCGDHSNGGESGRR Trigger: CCGGCGTCCACTCTCGCCCCCATTGCTGTGATCTCCACACAACCACGAGCGGCCTTGAGAGCGCAGCGAGGCCGTGAGGCTGCGCAGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | AGGCCGCTCGTGGTTGTGTGGAGATCACAGCAATGGGGGCGAGAGTaGACGCCGGAGTGCAGGTGGGGCTGGTGCAGACCTCCAGGTGCG | + |
Preference number: 5 (lower is better) Translates to: RPLVVVWRSQQWGRE*TPECRWGWCRPPGA Trigger: CGCACCTGGAGGTCTGCACCAGCCCCACCTGCACTCCGGCGTCCACTCTCGCCCCCATTGCTGTGATCTCCACACAACCACGAGCGGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | CAGCCTCACGGCCTCGCTGCGCTCTCAAGGCCGCTCGTGGTTGTGTaGAGATCACAGCAATGGGGGCGAGAGTGGACGCCGGAGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: QPHGLAALSRPLVVV*RSQQWGREWTPECR Trigger: CCTGCACTCCGGCGTCCACTCTCGCCCCCATTGCTGTGATCTCCACACAACCACGAGCGGCCTTGAGAGCGCAGCGAGGCCGTGAGGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS GCA 90 bp | GCGGTCCTGCTGACTGAGGGGCTCTGCGCAGCCTCACGGCCTCGCTaGGCTCTCAAGGCCGCTCGTGGTTGTGTGGAGATCACAGCAATG | + |
Preference number: 5 (lower is better) Translates to: AVLLTEGLCAASRPR*ALKAARGCVEITAM Trigger: CATTGCTGTGATCTCCACACAACCACGAGCGGCCTTGAGAGCGCAGCGAGGCCGTGAGGCTGCGCAGAGCCCCTCAGTCAGCAGGACCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | GCTGCGCTCTCAAGGCCGCTCGTGGTTGTGTGGAGATCACAGCAATaGGGGCGAGAGTGGACGCCGGAGTGCAGGTGGGGCTGGTGCAGA | + |
Preference number: 5 (lower is better) Translates to: AALSRPLVVVWRSQQ*GREWTPECRWGWCR Trigger: TCTGCACCAGCCCCACCTGCACTCCGGCGTCCACTCTCGCCCCCATTGCTGTGATCTCCACACAACCACGAGCGGCCTTGAGAGCGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | CGAGGTGCGGTTCTTTCCTCTGCACAAGCCGGCTTCCTGGGATCGTaGCTCTTCTGGGGAGAGGGACCTTGGAGAGCGCCTGCCTTCGGG | + |
Preference number: 5 (lower is better) Translates to: RGAVLSSAQAGFLGS*LFWGEGPWRAPAFG Trigger: CCCGAAGGCAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGGAAGCCGGCTTGTGCAGAGGAAAGAACCGCACCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | CAAGCCGGCTTCCTGGGATCGTGGCTCTTCTGGGGAGAGGGACCTTaGAGAGCGCCTGCCTTCGGGCAGGAGAATCTCCACTGGACGAGA | + |
Preference number: 5 (lower is better) Translates to: QAGFLGSWLFWGEGP*RAPAFGQENLHWTR Trigger: TCTCGTCCAGTGGAGATTCTCCTGCCCGAAGGCAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGGAAGCCGGCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS GCA 90 bp | CCTGGGATCGTGGCTCTTCTGGGGAGAGGGACCTTGGAGAGCGCCTaGCTTCGGGCAGGAGAATCTCCACTGGACGAGAGAGAATCTGGA | + |
Preference number: 5 (lower is better) Translates to: PGIVALLGRGTLESA*LRAGESPLDERESG Trigger: TCCAGATTCTCTCTCGTCCAGTGGAGATTCTCCTGCCCGAAGGCAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS GCA 90 bp | GGCAGAGCTGGGGTTGTTCTGACAACGAGGTGCGGTTCTTTCCTCTaGACAAGCCGGCTTCCTGGGATCGTGGCTCTTCTGGGGAGAGGG | + |
Preference number: 5 (lower is better) Translates to: GRAGVVLTTRCGSFL*TSRLPGIVALLGRG Trigger: CCCTCTCCCCAGAAGAGCCACGATCCCAGGAAGCCGGCTTGTGCAGAGGAAAGAACCGCACCTCGTTGTCAGAACAACCCCAGCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | GTTCTTTCCTCTGCACAAGCCGGCTTCCTGGGATCGTGGCTCTTCTaGGGAGAGGGACCTTGGAGAGCGCCTGCCTTCGGGCAGGAGAAT | + |
Preference number: 5 (lower is better) Translates to: VLSSAQAGFLGSWLF*GEGPWRAPAFGQEN Trigger: ATTCTCCTGCCCGAAGGCAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGGAAGCCGGCTTGTGCAGAGGAAAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 90 bp | TCTGACAACGAGGTGCGGTTCTTTCCTCTGCACAAGCCGGCTTCCTaGGATCGTGGCTCTTCTGGGGAGAGGGACCTTGGAGAGCGCCTG | + |
Preference number: 5 (lower is better) Translates to: SDNEVRFFPLHKPAS*DRGSSGERDLGERL Trigger: CAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGGAAGCCGGCTTGTGCAGAGGAAAGAACCGCACCTCGTTGTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 90 bp | CGCTCCTCCGTTAGTCACGCAAGCTTGCCTGGGTGGTTAGCACAATaGAGCCGTCAAGCCACTAGGCAGGAAGGGCGGGAGCTGGCGTTT | + |
Preference number: 5 (lower is better) Translates to: RSSVSHASLPGWLAQ*SRQATRQEGRELAF Trigger: AAACGCCAGCTCCCGCCCTTCCTGCCTAGTGGCTTGACGGCTTCATTGTGCTAACCACCCAGGCAAGCTTGCGTGACTAACGGAGGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS GCA 90 bp | ACAGGAGCTTGTGAGGCCCGAGGAGTGTCCGTGTGGCAAGGCCCCTaGCCCAGCTTTTCATTTATGAAACAGAGCGTGACCTCCAGAACT | + |
Preference number: 5 (lower is better) Translates to: TGACEARGVSVWQGP*PSFSFMKQSVTSRT Trigger: AGTTCTGGAGGTCACGCTCTGTTTCATAAATGAAAAGCTGGGGCAGGGGCCTTGCCACACGGACACTCCTCGGGCCTCACAAGCTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 72 bp | GACGGCCCACTGAACCGTGAGCGCGGTCCTGCTGACTaGGGGGCTCTGCGCAGCCTCACGGCCTCGCTGCGC | + |
Preference number: 6 (lower is better) Translates to: DGPLNRERGPAD*GALRSLTASLR Trigger: GCGCAGCGAGGCCGTGAGGCTGCGCAGAGCCCCTCAGTCAGCAGGACCGCGCTCACGGTTCAGTGGGCCGTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS GCA 72 bp | GGGCGAGAGTGGACGCCGGAGTGCAGGTGGGGCTGGTaGAGACCTCCAGGTGCGGGTAACGGGGACTGGCCC | + |
Preference number: 6 (lower is better) Translates to: GREWTPECRWGW*RPPGAGNGDWP Trigger: GGGCCAGTCCCCGTTACCCGCACCTGGAGGTCTGCACCAGCCCCACCTGCACTCCGGCGTCCACTCTCGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | CAGCAATGGGGGCGAGAGTGGACGCCGGAGTGCAGGTaGGGCTGGTGCAGACCTCCAGGTGCGGGTAACGGG | + |
Preference number: 6 (lower is better) Translates to: QQWGREWTPECR*GWCRPPGAGNG Trigger: CCCGTTACCCGCACCTGGAGGTCTGCACCAGCCCCACCTGCACTCCGGCGTCCACTCTCGCCCCCATTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CAA 90 bp | CTGCGCAGCCTCACGGCCTCGCTGCGCTCTCAAGGCCGCTCGTGGTaGTGTGGAGATCACAGCAATGGGGGCGAGAGTGGACGCCGGAGT | + |
Preference number: 6 (lower is better) Translates to: LRSLTASLRSQGRSW*CGDHSNGGESGRRS Trigger: ACTCCGGCGTCCACTCTCGCCCCCATTGCTGTGATCTCCACACAACCACGAGCGGCCTTGAGAGCGCAGCGAGGCCGTGAGGCTGCGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | GGCCTCGCTGCGCTCTCAAGGCCGCTCGTGGTTGTGTaGAGATCACAGCAATGGGGGCGAGAGTGGACGCCG | + |
Preference number: 6 (lower is better) Translates to: GLAALSRPLVVV*RSQQWGREWTP Trigger: CGGCGTCCACTCTCGCCCCCATTGCTGTGATCTCCACACAACCACGAGCGGCCTTGAGAGCGCAGCGAGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | TCTGCACAAGCCGGCTTCCTGGGATCGTGGCTCTTCTaGGGAGAGGGACCTTGGAGAGCGCCTGCCTTCGGG | + |
Preference number: 6 (lower is better) Translates to: SAQAGFLGSWLF*GEGPWRAPAFG Trigger: CCCGAAGGCAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGGAAGCCGGCTTGTGCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | GTGGTTGTGTGGAGATCACAGCAATGGGGGCGAGAGTaGACGCCGGAGTGCAGGTGGGGCTGGTGCAGACCT | + |
Preference number: 6 (lower is better) Translates to: VVVWRSQQWGRE*TPECRWGWCRP Trigger: AGGTCTGCACCAGCCCCACCTGCACTCCGGCGTCCACTCTCGCCCCCATTGCTGTGATCTCCACACAACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | AGCCTCACGGCCTCGCTGCGCTCTCAAGGCCGCTCGTaGTTGTGTGGAGATCACAGCAATGGGGGCGAGAGT | + |
Preference number: 6 (lower is better) Translates to: SLTASLRSQGRS*LCGDHSNGGES Trigger: ACTCTCGCCCCCATTGCTGTGATCTCCACACAACCACGAGCGGCCTTGAGAGCGCAGCGAGGCCGTGAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CAA 72 bp | CTCACGGCCTCGCTGCGCTCTCAAGGCCGCTCGTGGTaGTGTGGAGATCACAGCAATGGGGGCGAGAGTGGA | + |
Preference number: 6 (lower is better) Translates to: LTASLRSQGRSW*CGDHSNGGESG Trigger: TCCACTCTCGCCCCCATTGCTGTGATCTCCACACAACCACGAGCGGCCTTGAGAGCGCAGCGAGGCCGTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CAA 90 bp | ACAAGCCGGCTTCCTGGGATCGTGGCTCTTCTGGGGAGAGGGACCTaGGAGAGCGCCTGCCTTCGGGCAGGAGAATCTCCACTGGACGAG | + |
Preference number: 6 (lower is better) Translates to: TSRLPGIVALLGRGT*ESACLRAGESPLDE Trigger: CTCGTCCAGTGGAGATTCTCCTGCCCGAAGGCAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGGAAGCCGGCTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 72 bp | CTGTATGACGGAGCTCCCCGCGTTGGGCAAGCAGGGTaGCCCCGTCCTCCATCATGGCTCTCTCACTGTGAC | + |
Preference number: 6 (lower is better) Translates to: LYDGAPRVGQAG*PRPPSWLSHCD Trigger: GTCACAGTGAGAGAGCCATGATGGAGGACGGGGTCACCCTGCTTGCCCAACGCGGGGAGCTCCGTCATACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 72 bp | CAGAGCGTGACCTCCAGAACTCACTGGGGTTCTGTATaGCGGAGCTCCCCGCGTTGGGCAAGCAGGGTGACC | + |
Preference number: 6 (lower is better) Translates to: QSVTSRTHWGSV*RSSPRWASRVT Trigger: GGTCACCCTGCTTGCCCAACGCGGGGAGCTCCGTCATACAGAACCCCAGTGAGTTCTGGAGGTCACGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS GCA 72 bp | GTGGCTCTTCTGGGGAGAGGGACCTTGGAGAGCGCCTaGCTTCGGGCAGGAGAATCTCCACTGGACGAGAGA | + |
Preference number: 6 (lower is better) Translates to: VALLGRGTLESA*LRAGESPLDER Trigger: TCTCTCGTCCAGTGGAGATTCTCCTGCCCGAAGGCAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | TTCCTGGGATCGTGGCTCTTCTGGGGAGAGGGACCTTaGAGAGCGCCTGCCTTCGGGCAGGAGAATCTCCAC | + |
Preference number: 6 (lower is better) Translates to: FLGSWLFWGEGP*RAPAFGQENLH Trigger: GTGGAGATTCTCCTGCCCGAAGGCAGGCGCTCTCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 72 bp | CTATCCAGGTCATACCTGCATGGCGGGATTCTTCGATaGGCCAAGCAGTCCTGGGCCCCAGAGCTGGGGCTG | + |
Preference number: 6 (lower is better) Translates to: LSRSYLHGGILR*AKQSWAPELGL Trigger: CAGCCCCAGCTCTGGGGCCCAGGACTGCTTGGCTCATCGAAGAATCCCGCCATGCAGGTATGACCTGGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | GAGGTGCGGTTCTTTCCTCTGCACAAGCCGGCTTCCTaGGATCGTGGCTCTTCTGGGGAGAGGGACCTTGGA | + |
Preference number: 6 (lower is better) Translates to: EVRFFPLHKPAS*DRGSSGERDLG Trigger: TCCAAGGTCCCTCTCCCCAGAAGAGCCACGATCCCAGGAAGCCGGCTTGTGCAGAGGAAAGAACCGCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS GCA 72 bp | GTAGGTGGCAGAGCTGGGGTTGTTCTGACAACGAGGTaGGGTTCTTTCCTCTGCACAAGCCGGCTTCCTGGG | + |
Preference number: 6 (lower is better) Translates to: VGGRAGVVLTTR*GSFLCTSRLPG Trigger: CCCAGGAAGCCGGCTTGTGCAGAGGAAAGAACCGCACCTCGTTGTCAGAACAACCCCAGCTCTGCCACCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 72 bp | GTTAGTCACGCAAGCTTGCCTGGGTGGTTAGCACAATaGAGCCGTCAAGCCACTAGGCAGGAAGGGCGGGAG | + |
Preference number: 6 (lower is better) Translates to: VSHASLPGWLAQ*SRQATRQEGRE Trigger: CTCCCGCCCTTCCTGCCTAGTGGCTTGACGGCTTCATTGTGCTAACCACCCAGGCAAGCTTGCGTGACTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 72 bp | GGAGTCGGTATGGGGTGGGGGTGCAATAAGGGACATTaGCCCTCAGGTGTGTGGGCTTGGAAACTAGGAGCG | + |
Preference number: 6 (lower is better) Translates to: GVGMGWGCNKGH*PSGVWAWKLGA Trigger: CGCTCCTAGTTTCCAAGCCCACACACCTGAGGGTCAATGTCCCTTATTGCACCCCCACCCCATACCGACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS GCA 72 bp | TGTGAGGCCCGAGGAGTGTCCGTGTGGCAAGGCCCCTaGCCCAGCTTTTCATTTATGAAACAGAGCGTGACC | + |
Preference number: 6 (lower is better) Translates to: CEARGVSVWQGP*PSFSFMKQSVT Trigger: GGTCACGCTCTGTTTCATAAATGAAAAGCTGGGGCAGGGGCCTTGCCACACGGACACTCCTCGGGCCTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CAA 90 bp | GTGGTGACGGGGGAGATGCAGGGAATGGGCAGACAGGAGAGATACTaGGGGCAAGAACAAACAGGACTTGCTGATGGAGTCGGTATGGGG | + |
Preference number: 6 (lower is better) Translates to: VVTGEMQGMGRQERY*GQEQTGLADGVGMG Trigger: CCCCATACCGACTCCATCAGCAAGTCCTGTTTGTTCTTGCCCCAAGTATCTCTCCTGTCTGCCCATTCCCTGCATCTCCCCCGTCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | CTTGCCCAAGGTCACACAAGGTGTAGGTGGCAGAGCTaGGGTTGTTCTGACAACGAGGTGCGGTTCTTTCCT | + |
Preference number: 6 (lower is better) Translates to: LAQGHTRCRWQS*GCSDNEVRFFP Trigger: AGGAAAGAACCGCACCTCGTTGTCAGAACAACCCCAGCTCTGCCACCTACACCTTGTGTGACCTTGGGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CCA 72 bp | GGCAAGAACAAACAGGACTTGCTGATGGAGTCGGTATaGGGTGGGGGTGCAATAAGGGACATTGACCCTCAG | + |
Preference number: 6 (lower is better) Translates to: GKNKQDLLMESV*GGGAIRDIDPQ Trigger: CTGAGGGTCAATGTCCCTTATTGCACCCCCACCCCATACCGACTCCATCAGCAAGTCCTGTTTGTTCTTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS CAA 72 bp | CGTGACGAGATTGTGCATCTGAGAAGTTTCTCTGACTaGCCCAAGGTCACACAAGGTGTAGGTGGCAGAGCT | + |
Preference number: 6 (lower is better) Translates to: RDEIVHLRSFSD*PKVTQGVGGRA Trigger: AGCTCTGCCACCTACACCTTGTGTGACCTTGGGCAAGTCAGAGAAACTTCTCAGATGCACAATCTCGTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435044.2 |
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CDS TCA 72 bp | GGCTTGGAAACTAGGAGCGTGACGAGATTGTGCATCTaGGAAGTTTCTCTGACTTGCCCAAGGTCACACAAG | + |
Preference number: 6 (lower is better) Translates to: GLETRSVTRLCI*EVSLTCPRSHK Trigger: CTTGTGTGACCTTGGGCAAGTCAGAGAAACTTCTCAGATGCACAATCTCGTCACGCTCCTAGTTTCCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435044.2 |