Pregenerated sensors for LINC00381 (Homo sapiens)
Ensembl gene IDs: ENSG00000226240Ensembl transcript IDs: ENST00000423629.1, ENST00000649990.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCCCTCACTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTaGCGGCACTTGAGGAACACTTCAGCCCACCGCTGCATTGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SPHSLSAPPLPGLPL*RHLRNTSAHRCIVG Trigger: TCCCACAATGCAGCGGTGGGCTGAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGTGAGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS TCA 90 bp | CGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTaGGGAACACTTCAGCCCACCGCTGCATTGTGGGATCCCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: RSRRLLCLGSHFGGT*GTLQPTAALWDPLS Trigger: AGAAAGGGGATCCCACAATGCAGCGGTGGGCTGAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS GCA 90 bp | ATCCCCTTTCTGGGCTGGCCAAGGCCGGAGCCTGCTCCCTCAGCTTaGAGGGAGGTATCAAGTTTCTATACTGTAGTCCCAGCTATGTGC | + |
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Preference number: 5 (lower is better) Translates to: IPFLGWPRPEPAPSA*REVSSFYTVVPAMC Trigger: GCACATAGCTGGGACTACAGTATAGAAACTTGATACCTCCCTGCAAGCTGAGGGAGCAGGCTCCGGCCTTGGCCAGCCCAGAAAGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423629.1 |
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| CDS GCA 90 bp | CTGCCTTCTATATCTTTATTTAAGATGATCTGCGGCTGTACGCCCTaGCACCTTCAGCTCTCCTTGACTGTGGATGCCCCTGCTGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LPSISLFKMICGCTP*HLQLSLTVDAPAAP Trigger: GGGAGCAGCAGGGGCATCCACAGTCAAGGAGAGCTGAAGGTGGCAGGGCGTACAGCCGCAGATCATCTTAAATAAAGATATAGAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS GCA 90 bp | GAGGTTAGGAATCATGCCAAAATTTCTCTGAATGGAGTCACTCTCTaGATAATCTCCCCGGCTCGGACCACCTCTCACAACTGTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: EVRNHAKISLNGVTL*IISPARTTSHNCVL Trigger: CAGCACACAGTTGTGAGAGGTGGTCCGAGCCGGGGAGATTATGCAGAGAGTGACTCCATTCAGAGAAATTTTGGCATGATTCCTAACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS TCA 90 bp | AATTTCCAGAAAGGGTCACTTGAGGCCTCTCACTCACATCTCCTCTaGCTGATGAGTTTCCAGGGGTGTCCAATCTTTTGGCTTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: NFQKGSLEASHSHLL*LMSFQGCPIFWLPW Trigger: CCAAGGAAGCCAAAAGATTGGACACCCCTGGAAACTCATCAGTCAGAGGAGATGTGAGTGAGAGGCCTCAAGTGACCCTTTCTGGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS TCA 90 bp | CTCCTCCCATGTTTTCATATGGAAGAATTTCCAGAAAGGGTCACTTaGGGCCTCTCACTCACATCTCCTCTGACTGATGAGTTTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LLPCFHMEEFPERVT*GLSLTSPLTDEFPG Trigger: CCCTGGAAACTCATCAGTCAGAGGAGATGTGAGTGAGAGGCCTCAAGTGACCCTTTCTGGAAATTCTTCCATATGAAAACATGGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS CCA 90 bp | ATGTGGTTCCTACATAGGAAACCTCCCTCCTCCCATGTTTTCATATaGAAGAATTTCCAGAAAGGGTCACTTGAGGCCTCTCACTCACAT | + |
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Preference number: 5 (lower is better) Translates to: MWFLHRKPPSSHVFI*KNFQKGSLEASHSH Trigger: ATGTGAGTGAGAGGCCTCAAGTGACCCTTTCTGGAAATTCTTCCATATGAAAACATGGGAGGAGGGAGGTTTCCTATGTAGGAACCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS GCA 90 bp | TTCTTTTATGAGAGTCTGCCTTCTATATCTTTATTTAAGATGATCTaGGGCTGTACGCCCTGCCACCTTCAGCTCTCCTTGACTGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: FFYESLPSISLFKMI*GCTPCHLQLSLTVD Trigger: ATCCACAGTCAAGGAGAGCTGAAGGTGGCAGGGCGTACAGCCGCAGATCATCTTAAATAAAGATATAGAAGGCAGACTCTCATAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS TCA 90 bp | TTAGCCTCTGTCTGGTGCTCTCTTGAAGGCATCAATTCTCTCAGGTaGGAACCACAAATAAAATTTAAGAAATTCTCCCTCAGGCTAAGA | + |
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Preference number: 5 (lower is better) Translates to: LASVWCSLEGINSLR*EPQIKFKKFSLRLR Trigger: TCTTAGCCTGAGGGAGAATTTCTTAAATTTTATTTGTGGTTCTCACCTGAGAGAATTGATGCCTTCAAGAGAGCACCAGACAGAGGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS CCA 72 bp | AGCCCACCGCTGCATTGTGGGATCCCCTTTCTGGGCTaGCCAAGGCCGGAGCCTGCTCCCTCAGCTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SPPLHCGIPFLG*PRPEPAPSACR Trigger: CCTGCAAGCTGAGGGAGCAGGCTCCGGCCTTGGCCAGCCCAGAAAGGGGATCCCACAATGCAGCGGTGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS CCA 72 bp | TCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTaGCGGCACTTGAGGAACACTTCAGCCCACCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLSAPPLPGLPL*RHLRNTSAHRC Trigger: GCAGCGGTGGGCTGAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS CAA 72 bp | CTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTaGGCGGCACTTGAGGAACACTTCAGCCCACCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LALGASSAWAPT*AALEEHFSPPL Trigger: CAGCGGTGGGCTGAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS CAA 90 bp | CAGCCCTCACTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTaGGCGGCACTTGAGGAACACTTCAGCCCACCGCTGCATTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QPSLALGASSAWAPT*AALEEHFSPPLHCG Trigger: CCCACAATGCAGCGGTGGGCTGAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGTGAGGGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS CCA 72 bp | TCACAGCCCTCACTCGCTCTCGGCGCCTCCTCTGCCTaGGCTCCCACTTTGGCGGCACTTGAGGAACACTTC | + |
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Preference number: 6 (lower is better) Translates to: SQPSLALGASSA*APTLAALEEHF Trigger: GAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGTGAGGGCTGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS CAA 72 bp | GCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTaGAGGAACACTTCAGCCCACCGCTGCATTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: APPLPGLPLWRH*RNTSAHRCIVG Trigger: TCCCACAATGCAGCGGTGGGCTGAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS CAA 90 bp | TCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTaGAGGAACACTTCAGCCCACCGCTGCATTGTGGGATCCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLSAPPLPGLPLWRH*RNTSAHRCIVGSPF Trigger: GAAAGGGGATCCCACAATGCAGCGGTGGGCTGAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS TCA 72 bp | CGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTaGGGAACACTTCAGCCCACCGCTGCATTGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RLLCLGSHFGGT*GTLQPTAALWD Trigger: ATCCCACAATGCAGCGGTGGGCTGAAGTGTTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423629.1 ENST00000649990.1 |
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| CDS CAA 72 bp | TCTGGGCTGGCCAAGGCCGGAGCCTGCTCCCTCAGCTaGCAGGGAGGTATCAAGTTTCTATACTGTAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SGLAKAGACSLS*QGGIKFLYCSP Trigger: GGGACTACAGTATAGAAACTTGATACCTCCCTGCAAGCTGAGGGAGCAGGCTCCGGCCTTGGCCAGCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423629.1 |
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| CDS CAA 90 bp | GATCCCCTTTCTGGGCTGGCCAAGGCCGGAGCCTGCTCCCTCAGCTaGCAGGGAGGTATCAAGTTTCTATACTGTAGTCCCAGCTATGTG | + |
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Preference number: 6 (lower is better) Translates to: DPLSGLAKAGACSLS*QGGIKFLYCSPSYV Trigger: CACATAGCTGGGACTACAGTATAGAAACTTGATACCTCCCTGCAAGCTGAGGGAGCAGGCTCCGGCCTTGGCCAGCCCAGAAAGGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423629.1 |
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| CDS GCA 72 bp | ATATCTTTATTTAAGATGATCTGCGGCTGTACGCCCTaGCACCTTCAGCTCTCCTTGACTGTGGATGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: ISLFKMICGCTP*HLQLSLTVDAP Trigger: AGGGGCATCCACAGTCAAGGAGAGCTGAAGGTGGCAGGGCGTACAGCCGCAGATCATCTTAAATAAAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS GCA 72 bp | AATCATGCCAAAATTTCTCTGAATGGAGTCACTCTCTaGATAATCTCCCCGGCTCGGACCACCTCTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: NHAKISLNGVTL*IISPARTTSHN Trigger: GTTGTGAGAGGTGGTCCGAGCCGGGGAGATTATGCAGAGAGTGACTCCATTCAGAGAAATTTTGGCATGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS GCA 72 bp | GAGAGTCTGCCTTCTATATCTTTATTTAAGATGATCTaGGGCTGTACGCCCTGCCACCTTCAGCTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ESLPSISLFKMI*GCTPCHLQLSL Trigger: CAAGGAGAGCTGAAGGTGGCAGGGCGTACAGCCGCAGATCATCTTAAATAAAGATATAGAAGGCAGACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS CAA 72 bp | CCTCTGACTGATGAGTTTCCAGGGGTGTCCAATCTTTaGGCTTCCTTGGGGCACACTGATCATATTTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: PLTDEFPGVSNL*ASLGHTDHISH Trigger: ATGCGAAATATGATCAGTGTGCCCCAAGGAAGCCAAAAGATTGGACACCCCTGGAAACTCATCAGTCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS CAA 72 bp | AGCCAGCTCCTGACCCATCCAAGGAGGATAATTTTATaGCATGTCTGTTTAGCCTCTGTCTGGTGCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SQLLTHPRRIIL*HVCLASVWCSL Trigger: AAGAGAGCACCAGACAGAGGCTAAACAGACATGCAATAAAATTATCCTCCTTGGATGGGTCAGGAGCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS CCA 72 bp | CTACATAGGAAACCTCCCTCCTCCCATGTTTTCATATaGAAGAATTTCCAGAAAGGGTCACTTGAGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LHRKPPSSHVFI*KNFQKGSLEAS Trigger: AGAGGCCTCAAGTGACCCTTTCTGGAAATTCTTCCATATGAAAACATGGGAGGAGGGAGGTTTCCTATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS TCA 72 bp | TTTATGAGAGTCTGCCTTCTATATCTTTATTTAAGATaGTCTGCGGCTGTACGCCCTGCCACCTTCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FMRVCLLYLYLR*SAAVRPATFSS Trigger: AGAGCTGAAGGTGGCAGGGCGTACAGCCGCAGATCATCTTAAATAAAGATATAGAAGGCAGACTCTCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS CAA 90 bp | CTTCCTTGGGGCACACTGATCATATTTCGCATTGGAAATAGTCTTTaGCTGCCTTTCTTTGTCCTCTCTCCTGTTGTTAGTGGTCAATGT | + |
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Preference number: 6 (lower is better) Translates to: LPWGTLIIFRIGNSL*LPFFVLSPVVSGQC Trigger: ACATTGACCACTAACAACAGGAGAGAGGACAAAGAAAGGCAGCAAAAGACTATTTCCAATGCGAAATATGATCAGTGTGCCCCAAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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| CDS CAA 90 bp | ACCAGGAAGCAGGAACTGATCATATTTCGCATTGGAAATAGTCTTTaGCTGCCTTTCTTTGTCCTCTCTCCTGTTGTTAGTGGTCAATGT | + |
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Preference number: 6 (lower is better) Translates to: TRKQELIIFRIGNSL*LPFFVLSPVVSGQC Trigger: ACATTGACCACTAACAACAGGAGAGAGGACAAAGAAAGGCAGCAAAAGACTATTTCCAATGCGAAATATGATCAGTTCCTGCTTCCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423629.1 |
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| CDS CAA 72 bp | TTGGCCGTCGTTTTCTTTTCTGTTCCAGTTATCGTTTaGTTGGATTATCATAAGCGGATCTCTTGCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LAVVFFSVPVIV*LDYHKRISCSS Trigger: AGAGGAGCAAGAGATCCGCTTATGATAATCCAACAAAACGATAACTGGAACAGAAAAGAAAACGACGGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649990.1 |
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