Pregenerated sensors for LINC00376 (Homo sapiens)

Ensembl gene IDs: ENSG00000227564

Ensembl transcript IDs: ENST00000439454.3

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGGTCCGTGGCTTCATTCTTGAAGTCAGTGAGACCACGAACCCACTaGAAGGAACAAACTTCTGTGTCTTTCAGTGCTTCTCACTTCTAT	+
Preference number: 5 (lower is better) Translates to: GSVASFLKSVRPRTH*KEQTSVSFSASHFY Trigger: ATAGAAGTGAGAAGCACTGAAAGACACAGAAGTTTGTTCCTTCCAGTGGGTTCGTGGTCTCACTGACTTCAAGAATGAAGCCACGGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439454.3
CDS CAA 72 bp	GTTCTGGTCCTTTCGCGAGGGTCCGTGGCTTCATTCTaGAAGTCAGTGAGACCACGAACCCACTGGAAGGAA	+
Preference number: 6 (lower is better) Translates to: VLVLSRGSVASF*KSVRPRTHWKE Trigger: TTCCTTCCAGTGGGTTCGTGGTCTCACTGACTTCAAGAATGAAGCCACGGACCCTCGCGAAAGGACCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439454.3
CDS CAA 90 bp	TTGCCCCTGGTTCTGGTCCTTTCGCGAGGGTCCGTGGCTTCATTCTaGAAGTCAGTGAGACCACGAACCCACTGGAAGGAACAAACTTCT	+
Preference number: 6 (lower is better) Translates to: LPLVLVLSRGSVASF*KSVRPRTHWKEQTS Trigger: AGAAGTTTGTTCCTTCCAGTGGGTTCGTGGTCTCACTGACTTCAAGAATGAAGCCACGGACCCTCGCGAAAGGACCAGAACCAGGGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439454.3
CDS CCA 72 bp	GTCTTAAATGATACTGCAGCTGTGAGATTTTGCCCCTaGTTCTGGTCCTTTCGCGAGGGTCCGTGGCTTCAT	+
Preference number: 6 (lower is better) Translates to: VLNDTAAVRFCP*FWSFREGPWLH Trigger: ATGAAGCCACGGACCCTCGCGAAAGGACCAGAACCAGGGGCAAAATCTCACAGCTGCAGTATCATTTAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439454.3
CDS CCA 72 bp	GCTTCATTCTTGAAGTCAGTGAGACCACGAACCCACTaGAAGGAACAAACTTCTGTGTCTTTCAGTGCTTCT	+
Preference number: 6 (lower is better) Translates to: ASFLKSVRPRTH*KEQTSVSFSAS Trigger: AGAAGCACTGAAAGACACAGAAGTTTGTTCCTTCCAGTGGGTTCGTGGTCTCACTGACTTCAAGAATGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439454.3
CDS CAA 72 bp	CCTCAGTCGTCAAGTGGTATAATACTCACGAACAGCTaGAACCATAAACACAAGGAAATTCCAGGTGGATTC	+
Preference number: 6 (lower is better) Translates to: PQSSSGIILTNS*NHKHKEIPGGF Trigger: GAATCCACCTGGAATTTCCTTGTGTTTATGGTTCAAGCTGTTCGTGAGTATTATACCACTTGACGACTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439454.3
CDS CAA 90 bp	TTGATTCTGCCTCAGTCGTCAAGTGGTATAATACTCACGAACAGCTaGAACCATAAACACAAGGAAATTCCAGGTGGATTCAATACCTTT	+
Preference number: 6 (lower is better) Translates to: LILPQSSSGIILTNS*NHKHKEIPGGFNTF Trigger: AAAGGTATTGAATCCACCTGGAATTTCCTTGTGTTTATGGTTCAAGCTGTTCGTGAGTATTATACCACTTGACGACTGAGGCAGAATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439454.3

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