Pregenerated sensors for LINC00375 (Homo sapiens)
Ensembl gene IDs: ENSG00000226370Ensembl transcript IDs: ENST00000433074.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGGACCATGAGTCCAGCCTTTGCTCTTCTCCACGAACTGAATTATaGATAGGGCTTCCATTCTACTCATCCCAGGAAGAAACAGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: WDHESSLCSSPRTEL*IGLPFYSSQEETVP Trigger: GGGGACTGTTTCTTCCTGGGATGAGTAGAATGGAAGCCCTATGCATAATTCAGTTCGTGGAGAAGAGCAAAGGCTGGACTCATGGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS GCA 90 bp | CGGTGTTTACAGCAGACGCTGAGAGAAGCCACTTTGCAATGTGTATaGTTCCCATTGACGTTTGTCACCATGCTTCACCTCCAAATTGGG | + |
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Preference number: 5 (lower is better) Translates to: RCLQQTLREATLQCV*FPLTFVTMLHLQIG Trigger: CCCAATTTGGAGGTGAAGCATGGTGACAAACGTCAATGGGAAGCATACACATTGCAAAGTGGCTTCTCTCAGCGTCTGCTGTAAACACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS GCA 90 bp | TGTCACCATGCTTCACCTCCAAATTGGGACCATGAGTCCAGCCTTTaGTCTTCTCCACGAACTGAATTATGCATAGGGCTTCCATTCTAC | + |
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Preference number: 5 (lower is better) Translates to: CHHASPPNWDHESSL*SSPRTELCIGLPFY Trigger: GTAGAATGGAAGCCCTATGCATAATTCAGTTCGTGGAGAAGAGCAAAGGCTGGACTCATGGTCCCAATTTGGAGGTGAAGCATGGTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CCA 90 bp | TGTATGCTTCCCATTGACGTTTGTCACCATGCTTCACCTCCAAATTaGGACCATGAGTCCAGCCTTTGCTCTTCTCCACGAACTGAATTA | + |
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Preference number: 5 (lower is better) Translates to: CMLPIDVCHHASPPN*DHESSLCSSPRTEL Trigger: TAATTCAGTTCGTGGAGAAGAGCAAAGGCTGGACTCATGGTCCCAATTTGGAGGTGAAGCATGGTGACAAACGTCAATGGGAAGCATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CCA 72 bp | CCCATTGACGTTTGTCACCATGCTTCACCTCCAAATTaGGACCATGAGTCCAGCCTTTGCTCTTCTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: PIDVCHHASPPN*DHESSLCSSPR Trigger: TCGTGGAGAAGAGCAAAGGCTGGACTCATGGTCCCAATTTGGAGGTGAAGCATGGTGACAAACGTCAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS GCA 72 bp | CAGCAGACGCTGAGAGAAGCCACTTTGCAATGTGTATaGTTCCCATTGACGTTTGTCACCATGCTTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: QQTLREATLQCV*FPLTFVTMLHL Trigger: GAGGTGAAGCATGGTGACAAACGTCAATGGGAAGCATACACATTGCAAAGTGGCTTCTCTCAGCGTCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CAA 72 bp | ACCCGGTGTTTACAGCAGACGCTGAGAGAAGCCACTTaGCAATGTGTATGCTTCCCATTGACGTTTGTCACC | + |
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Preference number: 6 (lower is better) Translates to: TRCLQQTLREAT*QCVCFPLTFVT Trigger: GGTGACAAACGTCAATGGGAAGCATACACATTGCAAAGTGGCTTCTCTCAGCGTCTGCTGTAAACACCGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CAA 90 bp | CAGCAGACGCTGAGAGAAGCCACTTTGCAATGTGTATGCTTCCCATaGACGTTTGTCACCATGCTTCACCTCCAAATTGGGACCATGAGT | + |
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Preference number: 6 (lower is better) Translates to: QQTLREATLQCVCFP*TFVTMLHLQIGTMS Trigger: ACTCATGGTCCCAATTTGGAGGTGAAGCATGGTGACAAACGTCAATGGGAAGCATACACATTGCAAAGTGGCTTCTCTCAGCGTCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS GCA 72 bp | GCTTCACCTCCAAATTGGGACCATGAGTCCAGCCTTTaGTCTTCTCCACGAACTGAATTATGCATAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ASPPNWDHESSL*SSPRTELCIGL Trigger: AAGCCCTATGCATAATTCAGTTCGTGGAGAAGAGCAAAGGCTGGACTCATGGTCCCAATTTGGAGGTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CAA 72 bp | CTGAGAGAAGCCACTTTGCAATGTGTATGCTTCCCATaGACGTTTGTCACCATGCTTCACCTCCAAATTGGG | + |
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Preference number: 6 (lower is better) Translates to: LREATLQCVCFP*TFVTMLHLQIG Trigger: CCCAATTTGGAGGTGAAGCATGGTGACAAACGTCAATGGGAAGCATACACATTGCAAAGTGGCTTCTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CAA 90 bp | TGGGTTCACTGGTCGAGTTGTAAGGAGCTCCCTCTGCACTACTTGTaGCTGATCAAGGTCTGTTTATTAAGAGTGAAGCTGCTTAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: WVHWSSCKELPLHYL*LIKVCLLRVKLLSF Trigger: AAAGCTAAGCAGCTTCACTCTTAATAAACAGACCTTGATCAGCAACAAGTAGTGCAGAGGGAGCTCCTTACAACTCGACCAGTGAACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CAA 90 bp | AATTGGGTTCACTGGTCGAGTTGTAAGGAGCTCCCTCTGCACTACTaGTTGCTGATCAAGGTCTGTTTATTAAGAGTGAAGCTGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: NWVHWSSCKELPLHY*LLIKVCLLRVKLLS Trigger: GCTAAGCAGCTTCACTCTTAATAAACAGACCTTGATCAGCAACAAGTAGTGCAGAGGGAGCTCCTTACAACTCGACCAGTGAACCCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CAA 72 bp | TGGTCGAGTTGTAAGGAGCTCCCTCTGCACTACTTGTaGCTGATCAAGGTCTGTTTATTAAGAGTGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WSSCKELPLHYL*LIKVCLLRVKL Trigger: CAGCTTCACTCTTAATAAACAGACCTTGATCAGCAACAAGTAGTGCAGAGGGAGCTCCTTACAACTCGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CAA 72 bp | CACTGGTCGAGTTGTAAGGAGCTCCCTCTGCACTACTaGTTGCTGATCAAGGTCTGTTTATTAAGAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: HWSSCKELPLHY*LLIKVCLLRVK Trigger: CTTCACTCTTAATAAACAGACCTTGATCAGCAACAAGTAGTGCAGAGGGAGCTCCTTACAACTCGACCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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| CDS CAA 72 bp | AATGTTGATCTGGGCCATTTGCTGGAGTCCAGCTCCTaGTGTATTATGGCCACACAATCTCTATGGAATGTT | + |
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Preference number: 6 (lower is better) Translates to: NVDLGHLLESSS*CIMATQSLWNV Trigger: AACATTCCATAGAGATTGTGTGGCCATAATACACAAGGAGCTGGACTCCAGCAAATGGCCCAGATCAACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433074.1 |
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