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Pregenerated sensors for LINC00374 (Homo sapiens)

Ensembl gene IDs: ENSG00000232954

Ensembl transcript IDs: ENST00000454780.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp ACTGGTGCTCATCTGGGATCTAGAGGCAGATATCTGAGGATCATGTaGAAGTCATCATCAATAAGATTAAGGCCGATTTCTCAACAGAAG +
Preference number: 5 (lower is better)
Translates to: TGAHLGSRGRYLRIM*KSSSIRLRPISQQK
Trigger: CTTCTGTTGAGAAATCGGCCTTAATCTTATTGATGATGACTTTCACATGATCCTCAGATATCTGCCTCTAGATCCCAGATGAGCACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS TCA 90 bp TTTTCAATTCCTTGCCAGATGCCATGTATTTGTTGGTCCAATAAATaGTGTACTAGAATATACAGCGGTTCTTGTCGGGTGTATACGTCT +
Preference number: 5 (lower is better)
Translates to: FSIPCQMPCICWSNK*CTRIYSGSCRVYTS
Trigger: AGACGTATACACCCGACAAGAACCGCTGTATATTCTAGTACATCATTTATTGGACCAACAAATACATGGCATCTGGCAAGGAATTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS TCA 90 bp TATAATCCTTTCATAATTTATCTTGATATACAGATAGATGACGTTTaGCTGCTGCAACTGGTGCTCATCTGGGATCTAGAGGCAGATATC +
Preference number: 5 (lower is better)
Translates to: YNPFIIYLDIQIDDV*LLQLVLIWDLEADI
Trigger: GATATCTGCCTCTAGATCCCAGATGAGCACCAGTTGCAGCAGTCAAACGTCATCTATCTGTATATCAAGATAAATTATGAAAGGATTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS GCA 90 bp CCCTGTATTCCAGATAGACAAGCCACTTTTCAATTCCTTGCCAGATaGCATGTATTTGTTGGTCCAATAAATGATGTACTAGAATATACA +
Preference number: 5 (lower is better)
Translates to: PCIPDRQATFQFLAR*HVFVGPINDVLEYT
Trigger: TGTATATTCTAGTACATCATTTATTGGACCAACAAATACATGGCATCTGGCAAGGAATTGAAAAGTGGCTTGTCTATCTGGAATACAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS TCA 90 bp ATTCAACTCTCCAAACTCAGAGCCTACCTTTTTCTTCTTTCTTCTTaGAATCTTATCCATTTGCATGACTTTATACCTCCTCTGCATACA +
Preference number: 5 (lower is better)
Translates to: IQLSKLRAYLFLLSS*NLIHLHDFIPPLHT
Trigger: TGTATGCAGAGGAGGTATAAAGTCATGCAAATGGATAAGATTTCAAGAAGAAAGAAGAAAAAGGTAGGCTCTGAGTTTGGAGAGTTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS TCA 72 bp CCTTGCCAGATGCCATGTATTTGTTGGTCCAATAAATaGTGTACTAGAATATACAGCGGTTCTTGTCGGGTG +
Preference number: 6 (lower is better)
Translates to: PCQMPCICWSNK*CTRIYSGSCRV
Trigger: CACCCGACAAGAACCGCTGTATATTCTAGTACATCATTTATTGGACCAACAAATACATGGCATCTGGCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS TCA 72 bp CATCTGGGATCTAGAGGCAGATATCTGAGGATCATGTaGAAGTCATCATCAATAAGATTAAGGCCGATTTCT +
Preference number: 6 (lower is better)
Translates to: HLGSRGRYLRIM*KSSSIRLRPIS
Trigger: AGAAATCGGCCTTAATCTTATTGATGATGACTTTCACATGATCCTCAGATATCTGCCTCTAGATCCCAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS TCA 72 bp TCCATAAAAGAAACCAGTGACATTTGTAGAAATGGCTaGTTCTATGGTGGAGCAAGAAATACACACGAGTCT +
Preference number: 6 (lower is better)
Translates to: SIKETSDICRNG*FYGGARNTHES
Trigger: AGACTCGTGTGTATTTCTTGCTCCACCATAGAATCAGCCATTTCTACAAATGTCACTGGTTTCTTTTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS TCA 72 bp TTCATAATTTATCTTGATATACAGATAGATGACGTTTaGCTGCTGCAACTGGTGCTCATCTGGGATCTAGAG +
Preference number: 6 (lower is better)
Translates to: FIIYLDIQIDDV*LLQLVLIWDLE
Trigger: CTCTAGATCCCAGATGAGCACCAGTTGCAGCAGTCAAACGTCATCTATCTGTATATCAAGATAAATTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS CCA 72 bp TCAATAAGATTAAGGCCGATTTCTCAACAGAAGTTATaGAGGCTCTCCAGCAACAACTTCATTATCTCTGTA +
Preference number: 6 (lower is better)
Translates to: SIRLRPISQQKL*RLSSNNFIISV
Trigger: TACAGAGATAATGAAGTTGTTGCTGGAGAGCCTCCATAACTTCTGTTGAGAAATCGGCCTTAATCTTATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS CAA 72 bp AACCCAGTAGCAAAGAACACACTTAGTAGTCAGATCTaGGTTTCCAATGTCATTCTCCATAAAAGAAACCAG +
Preference number: 6 (lower is better)
Translates to: NPVAKNTLSSQI*VSNVILHKRNQ
Trigger: CTGGTTTCTTTTATGGAGAATGACATTGGAAACCAAGATCTGACTACTAAGTGTGTTCTTTGCTACTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454780.2
CDS CAA 90 bp CTAGAATATACAGCGGTTCTTGTCGGGTGTATACGTCTGTGGTTGTaGATATCTTTGATGTATTTTTACTTGATAAGAATTGCAAGTGTA +
Preference number: 6 (lower is better)
Translates to: LEYTAVLVGCIRLWL*ISLMYFYLIRIASV
Trigger: TACACTTGCAATTCTTATCAAGTAAAAATACATCAAAGATATCAACAACCACAGACGTATACACCCGACAAGAACCGCTGTATATTCTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454780.2