Pregenerated sensors for LINC00365 (Homo sapiens)
Ensembl gene IDs: ENSG00000224511Ensembl transcript IDs: ENST00000413591.1, ENST00000432770.1, ENST00000660467.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGCCATCGTCCCCCTCCTACCTCCAGGGCCCGGGAGGCCTGGCTaGAGGGGTGGCCCTGCCCTCTTCTGGACAAGCCATGAGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: EAIVPLLPPGPGRPG*RGGPALFWTSHEVE Trigger: CTCTACCTCATGGCTTGTCCAGAAGAGGGCAGGGCCACCCCTGCAGCCAGGCCTCCCGGGCCCTGGAGGTAGGAGGGGGACGATGGCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 90 bp | CCCAGGGCAGCAGAGGGCGAGTCAGCTGAGATGCCAAGCCTTCTCTaGTGGGCAGGGGAGCGAGGCCCGGGAACCCTCATGCACGACTCA | + |
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Preference number: 5 (lower is better) Translates to: PRAAEGESAEMPSLL*WAGERGPGTLMHDS Trigger: TGAGTCGTGCATGAGGGTTCCCGGGCCTCGCTCCCCTGCCCATCAGAGAAGGCTTGGCATCTCAGCTGACTCGCCCTCTGCTGCCCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 90 bp | CCGACGTCTCGTCAGGATGTTAGCAAAGCCAGTACCCGTTACGGGTaGCAGTATCACCAGGAGCACGCTGTTGAGCAGGGGACTCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: PTSRQDVSKASTRYG*QYHQEHAVEQGTPD Trigger: GTCAGGAGTCCCCTGCTCAACAGCGTGCTCCTGGTGATACTGCCACCCGTAACGGGTACTGGCTTTGCTAACATCCTGACGAGACGTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS GCA 90 bp | CAAGCCTTCTCTGATGGGCAGGGGAGCGAGGCCCGGGAACCCTCATaGACGACTCATTGTCATTGCATCCTCACTGTTGAATTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QAFSDGQGSEAREPS*TTHCHCILTVEFPG Trigger: TCCAGGAAATTCAACAGTGAGGATGCAATGACAATGAGTCGTGCATGAGGGTTCCCGGGCCTCGCTCCCCTGCCCATCAGAGAAGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 90 bp | CAAGTCACACAGGCCTGTATTGCCCGGCAATGCAACACGTGTAAGTaGCTGCGGGACTCCCTGCACTCAGCACCAGTGATGAAATCTGTC | + |
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Preference number: 5 (lower is better) Translates to: QVTQACIARQCNTCK*LRDSLHSAPVMKSV Trigger: GACAGATTTCATCACTGGTGCTGAGTGCAGGGAGTCCCGCAGCCACTTACACGTGTTGCATTGCCGGGCAATACAGGCCTGTGTGACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432770.1 ENST00000660467.1 |
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| CDS TCA 90 bp | TGTCATTGCATCCTCACTGTTGAATTTCCTGGATGTGTCAGACCATaGGCCTTGGCAGTGGAGAAACCAGGCATCTGCAGGCAGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: CHCILTVEFPGCVRP*ALAVEKPGICRQKP Trigger: GGGCTTCTGCCTGCAGATGCCTGGTTTCTCCACTGCCAAGGCTCATGGTCTGACACATCCAGGAAATTCAACAGTGAGGATGCAATGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432770.1 ENST00000660467.1 |
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| CDS GCA 90 bp | ACCACCGCCCCACCTTGTCACACAGGTGCCAAAATCCACCAAGTTTaGATTCACTGGCATCTGCTTCCATACTCTCATCAGCAATGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TTAPPCHTGAKIHQV*IHWHLLPYSHQQWA Trigger: TGCCCATTGCTGATGAGAGTATGGAAGCAGATGCCAGTGAATGCAAACTTGGTGGATTTTGGCACCTGTGTGACAAGGTGGGGCGGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS GCA 90 bp | ACTTCTTCTGTGCGCTGGTGTTCCGTAATCCCCCTGAAGCTGCGATaGCTGCAGTCAAGACTCAACCAATGGTGGAGTCAAGAATCACCA | + |
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Preference number: 5 (lower is better) Translates to: TSSVRWCSVIPLKLR*LQSRLNQWWSQESP Trigger: TGGTGATTCTTGACTCCACCATTGGTTGAGTCTTGACTGCAGGCATCGCAGCTTCAGGGGGATTACGGAACACCAGCGCACAGAAGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS TCA 90 bp | CCGGGAACCCTCATGCACGACTCATTGTCATTGCATCCTCACTGTTaGATTTCCTGGATGTGTCAGACCATGAGCCTTGGCAGTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: PGTLMHDSLSLHPHC*ISWMCQTMSLGSGE Trigger: TTCTCCACTGCCAAGGCTCATGGTCTGACACATCCAGGAAATTCAACAGTGAGGATGCAATGACAATGAGTCGTGCATGAGGGTTCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432770.1 ENST00000660467.1 |
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| CDS TCA 90 bp | GCCTGTATCTCTGGGTCTGCTTGTGTGCTAAAGCTCCCAAGGATATaGGCTGAGCCAGATCACCTTTATTCCCAGGGTTTCCAGAAACAC | + |
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Preference number: 5 (lower is better) Translates to: ACISGSACVLKLPRI*AEPDHLYSQGFQKH Trigger: GTGTTTCTGGAAACCCTGGGAATAAAGGTGATCTGGCTCAGCTCATATCCTTGGGAGCTTTAGCACACAAGCAGACCCAGAGATACAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 90 bp | GTAATCCCCCTGAAGCTGCGATGCCTGCAGTCAAGACTCAACCAATaGTGGAGTCAAGAATCACCACCCAGCAACAAGAGTCATTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: VIPLKLRCLQSRLNQ*WSQESPPSNKSHCK Trigger: TTTGCAATGACTCTTGTTGCTGGGTGGTGATTCTTGACTCCACCATTGGTTGAGTCTTGACTGCAGGCATCGCAGCTTCAGGGGGATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS TCA 90 bp | TATCTCTGGGTCTGCTTGTGTGCTAAAGCTCCCAAGGATATGAGCTaGGCCAGATCACCTTTATTCCCAGGGTTTCCAGAAACACAAGGG | + |
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Preference number: 5 (lower is better) Translates to: YLWVCLCAKAPKDMS*ARSPLFPGFPETQG Trigger: CCCTTGTGTTTCTGGAAACCCTGGGAATAAAGGTGATCTGGCTCAGCTCATATCCTTGGGAGCTTTAGCACACAAGCAGACCCAGAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS GCA 90 bp | GGCCTACTGATGTACCAGCGGACAAGTTCCTCTCTGTGGTTTACTTaGCAGCCATGCATTTCTTTGACCTTAGGTTGCACAAGGTCATTC | + |
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Preference number: 5 (lower is better) Translates to: GLLMYQRTSSSLWFT*QPCISLTLGCTRSF Trigger: GAATGACCTTGTGCAACCTAAGGTCAAAGAAATGCATGGCTGGCAAGTAAACCACAGAGAGGAACTTGTCCGCTGGTACATCAGTAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS CCA 90 bp | ATCCCCCTGAAGCTGCGATGCCTGCAGTCAAGACTCAACCAATGGTaGAGTCAAGAATCACCACCCAGCAACAAGAGTCATTGCAAAATA | + |
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Preference number: 5 (lower is better) Translates to: IPLKLRCLQSRLNQW*SQESPPSNKSHCKI Trigger: TATTTTGCAATGACTCTTGTTGCTGGGTGGTGATTCTTGACTCCACCATTGGTTGAGTCTTGACTGCAGGCATCGCAGCTTCAGGGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS TCA 90 bp | AGATCACCTTTATTCCCAGGGTTTCCAGAAACACAAGGGGCAACGTaGCTGTTGTCTAACTATCAGTTACCGTGTACTTCTTCTGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: RSPLFPGFPETQGAT*LLSNYQLPCTSSVR Trigger: GCGCACAGAAGAAGTACACGGTAACTGATAGTTAGACAACAGTCACGTTGCCCCTTGTGTTTCTGGAAACCCTGGGAATAAAGGTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS TCA 90 bp | TTCCCTGAATACACAGTGAACATGGCCCTAGAAATAGAGCTTTCATaGGACGTTCCGAGAGAAATGAATGTTTTCCCGTCCATTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: FPEYTVNMALEIELS*DVPREMNVFPSIPA Trigger: AGCAGGAATGGACGGGAAAACATTCATTTCTCTCGGAACGTCTCATGAAAGCTCTATTTCTAGGGCCATGTTCACTGTGTATTCAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS TCA 90 bp | CTGACAGTTACAGAAATGGACATGAAAACAACAGGCAGAGTTCCCTaGATACACAGTGAACATGGCCCTAGAAATAGAGCTTTCATGAGA | + |
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Preference number: 5 (lower is better) Translates to: LTVTEMDMKTTGRVP*IHSEHGPRNRAFMR Trigger: TCTCATGAAAGCTCTATTTCTAGGGCCATGTTCACTGTGTATTCAGGGAACTCTGCCTGTTGTTTTCATGTCCATTTCTGTAACTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 90 bp | AGTCCCATGCCAGCATCTCCACCCAAACTTGGTGTATCTGGTATATaGCCTGAGAATCTTCAATTATTGAATATCCTTTACAGAAAACTC | + |
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Preference number: 5 (lower is better) Translates to: SPMPASPPKLGVSGI*PENLQLLNILYRKL Trigger: GAGTTTTCTGTAAAGGATATTCAATAATTGAAGATTCTCAGGCCATATACCAGATACACCAAGTTTGGGTGGAGATGCTGGCATGGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS GCA 90 bp | TTTGCTAATCAGATTCATGAAAAGTGGTCTGGCATTGTTCTGATTTaGGTCTCTTTATTTCTGAGGAAGGATGAGCAGCTCTTCATATGT | + |
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Preference number: 5 (lower is better) Translates to: FANQIHEKWSGIVLI*VSLFLRKDEQLFIC Trigger: ACATATGAAGAGCTGCTCATCCTTCCTCAGAAATAAAGAGACGCAAATCAGAACAATGCCAGACCACTTTTCATGAATCTGATTAGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS CCA 90 bp | GTCTTACAGGATATAAATAAGGAACCGAATACAGTCCCTACCCTTTaGGGTTTACAACTGTATGGGAGAAAGACGAGCTTATACATAAAA | + |
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Preference number: 5 (lower is better) Translates to: VLQDINKEPNTVPTL*GLQLYGRKTSLYIK Trigger: TTTTATGTATAAGCTCGTCTTTCTCCCATACAGTTGTAAACCCCAAAGGGTAGGGACTGTATTCGGTTCCTTATTTATATCCTGTAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 90 bp | ATTCACTGGCATCTGCTTCCATACTCTCATCAGCAATGGGCATCATaGAACTTTATAATTTTTGCTAATCAGATTCATGAAAAGTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: IHWHLLPYSHQQWAS*NFIIFANQIHEKWS Trigger: AGACCACTTTTCATGAATCTGATTAGCAAAAATTATAAAGTTTCATGATGCCCATTGCTGATGAGAGTATGGAAGCAGATGCCAGTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 72 bp | GCAGAGGGCGAGTCAGCTGAGATGCCAAGCCTTCTCTaGTGGGCAGGGGAGCGAGGCCCGGGAACCCTCATG | + |
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Preference number: 6 (lower is better) Translates to: AEGESAEMPSLL*WAGERGPGTLM Trigger: CATGAGGGTTCCCGGGCCTCGCTCCCCTGCCCATCAGAGAAGGCTTGGCATCTCAGCTGACTCGCCCTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 72 bp | CAGGCCTGTATTGCCCGGCAATGCAACACGTGTAAGTaGCTGCGGGACTCCCTGCACTCAGCACCAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: QACIARQCNTCK*LRDSLHSAPVM Trigger: CATCACTGGTGCTGAGTGCAGGGAGTCCCGCAGCCACTTACACGTGTTGCATTGCCGGGCAATACAGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432770.1 ENST00000660467.1 |
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| CDS TCA 72 bp | TCCTCAGCACCCTTTCCTCTCAGATCCTCGTGGAGGTaGGTGGGAGATCCCATCAGGCAGCAGAAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSAPFPLRSSWR*VGDPIRQQKAE Trigger: CTCTGCCTTCTGCTGCCTGATGGGATCTCCCACTCACCTCCACGAGGATCTGAGAGGAAAGGGTGCTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS CCA 72 bp | CGTCAGGATGTTAGCAAAGCCAGTACCCGTTACGGGTaGCAGTATCACCAGGAGCACGCTGTTGAGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RQDVSKASTRYG*QYHQEHAVEQG Trigger: CCCCTGCTCAACAGCGTGCTCCTGGTGATACTGCCACCCGTAACGGGTACTGGCTTTGCTAACATCCTGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432770.1 ENST00000660467.1 |
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| CDS GCA 72 bp | TCTGATGGGCAGGGGAGCGAGGCCCGGGAACCCTCATaGACGACTCATTGTCATTGCATCCTCACTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SDGQGSEAREPS*TTHCHCILTVE Trigger: TTCAACAGTGAGGATGCAATGACAATGAGTCGTGCATGAGGGTTCCCGGGCCTCGCTCCCCTGCCCATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 72 bp | CTGAAGCTGCGATGCCTGCAGTCAAGACTCAACCAATaGTGGAGTCAAGAATCACCACCCAGCAACAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LKLRCLQSRLNQ*WSQESPPSNKS Trigger: ACTCTTGTTGCTGGGTGGTGATTCTTGACTCCACCATTGGTTGAGTCTTGACTGCAGGCATCGCAGCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 72 bp | TCTAACTATCAGTTACCGTGTACTTCTTCTGTGCGCTaGTGTTCCGTAATCCCCCTGAAGCTGCGATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SNYQLPCTSSVR*CSVIPLKLRCL Trigger: CAGGCATCGCAGCTTCAGGGGGATTACGGAACACCAGCGCACAGAAGAAGTACACGGTAACTGATAGTTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS TCA 72 bp | TCTGGGTCTGCTTGTGTGCTAAAGCTCCCAAGGATATaGGCTGAGCCAGATCACCTTTATTCCCAGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SGSACVLKLPRI*AEPDHLYSQGF Trigger: GAAACCCTGGGAATAAAGGTGATCTGGCTCAGCTCATATCCTTGGGAGCTTTAGCACACAAGCAGACCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 72 bp | AAGCTGCGATGCCTGCAGTCAAGACTCAACCAATGGTaGAGTCAAGAATCACCACCCAGCAACAAGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: KLRCLQSRLNQW*SQESPPSNKSH Trigger: ATGACTCTTGTTGCTGGGTGGTGATTCTTGACTCCACCATTGGTTGAGTCTTGACTGCAGGCATCGCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS TCA 72 bp | TCAAACCTGACTGATGAGCAGAATCACACGACAAGCTaGTTTCTAGAGTCCCATGCCAGCATCTCCACCCAA | + |
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Preference number: 6 (lower is better) Translates to: SNLTDEQNHTTS*FLESHASISTQ Trigger: TTGGGTGGAGATGCTGGCATGGGACTCTAGAAATCAGCTTGTCGTGTGATTCTGCTCATCAGTCAGGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 72 bp | CTCATGCACGACTCATTGTCATTGCATCCTCACTGTTaGATTTCCTGGATGTGTCAGACCATGAGCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LMHDSLSLHPHC*ISWMCQTMSLG Trigger: GCCAAGGCTCATGGTCTGACACATCCAGGAAATTCAACAGTGAGGATGCAATGACAATGAGTCGTGCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432770.1 ENST00000660467.1 |
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| CDS TCA 72 bp | GTCTGCTTGTGTGCTAAAGCTCCCAAGGATATGAGCTaGGCCAGATCACCTTTATTCCCAGGGTTTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VCLCAKAPKDMS*ARSPLFPGFPE Trigger: TTCTGGAAACCCTGGGAATAAAGGTGATCTGGCTCAGCTCATATCCTTGGGAGCTTTAGCACACAAGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS GCA 72 bp | GCAGAATCACACGACAAGCTGATTTCTAGAGTCCCATaGCAGCATCTCCACCCAAACTTGGTGTATCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: AESHDKLISRVP*QHLHPNLVYLV Trigger: TACCAGATACACCAAGTTTGGGTGGAGATGCTGGCATGGGACTCTAGAAATCAGCTTGTCGTGTGATTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS GCA 72 bp | CGGACAAGTTCCTCTCTGTGGTTTACTTGCCAGCCATaGATTTCTTTGACCTTAGGTTGCACAAGGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: RTSSSLWFTCQP*ISLTLGCTRSF Trigger: GAATGACCTTGTGCAACCTAAGGTCAAAGAAATGCATGGCTGGCAAGTAAACCACAGAGAGGAACTTGTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS GCA 72 bp | ATGTACCAGCGGACAAGTTCCTCTCTGTGGTTTACTTaGCAGCCATGCATTTCTTTGACCTTAGGTTGCACA | + |
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Preference number: 6 (lower is better) Translates to: MYQRTSSSLWFT*QPCISLTLGCT Trigger: TGTGCAACCTAAGGTCAAAGAAATGCATGGCTGGCAAGTAAACCACAGAGAGGAACTTGTCCGCTGGTACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS GCA 72 bp | GTGCCAAAATCCACCAAGTTTGCATTCACTGGCATCTaGTTCCATACTCTCATCAGCAATGGGCATCATGAA | + |
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Preference number: 6 (lower is better) Translates to: VPKSTKFAFTGI*FHTLISNGHHE Trigger: TTCATGATGCCCATTGCTGATGAGAGTATGGAAGCAGATGCCAGTGAATGCAAACTTGGTGGATTTTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS CAA 90 bp | GGACATACTTCTTGGTTTGACAGTTCATTTCTAGAGGCAGAAATATaGCAGGCAATCATCAGATGTAGCCCAAGGCAGCAGACAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GHTSWFDSSFLEAEI*QAIIRCSPRQQTRV Trigger: AACCCTTGTCTGCTGCCTTGGGCTACATCTGATGATTGCCTGCAATATTTCTGCCTCTAGAAATGAACTGTCAAACCAAGAAGTATGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 72 bp | TTATTCCCAGGGTTTCCAGAAACACAAGGGGCAACGTaGCTGTTGTCTAACTATCAGTTACCGTGTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LFPGFPETQGAT*LLSNYQLPCTS Trigger: AGAAGTACACGGTAACTGATAGTTAGACAACAGTCACGTTGCCCCTTGTGTTTCTGGAAACCCTGGGAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS TCA 72 bp | TACACAGTGAACATGGCCCTAGAAATAGAGCTTTCATaGGACGTTCCGAGAGAAATGAATGTTTTCCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: YTVNMALEIELS*DVPREMNVFPS Trigger: GGACGGGAAAACATTCATTTCTCTCGGAACGTCTCATGAAAGCTCTATTTCTAGGGCCATGTTCACTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CCA 72 bp | TGGGCATCCATTCTTGCCGACGTTGATACTCTTCTGTaGGAAATTTCAGAATCAGCTCCCATCAGTAGAATT | + |
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Preference number: 6 (lower is better) Translates to: WASILADVDTLL*EISESAPISRI Trigger: AATTCTACTGATGGGAGCTGATTCTGAAATTTCCCACAGAAGAGTATCAACGTCGGCAAGAATGGATGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS CAA 72 bp | ATTTCTAGAGTCCCATGCCAGCATCTCCACCCAAACTaGGTGTATCTGGTATATGGCCTGAGAATCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: ISRVPCQHLHPN*VYLVYGLRIFN Trigger: ATTGAAGATTCTCAGGCCATATACCAGATACACCAAGTTTGGGTGGAGATGCTGGCATGGGACTCTAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 72 bp | TTTTCTTCCAGAATCTTCTGCAGTGAGTCTCAAACCTaGCTGATGAGCAGAATCACACGACAAGCTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: FSSRIFCSESQT*LMSRITRQADF Trigger: GAAATCAGCTTGTCGTGTGATTCTGCTCATCAGTCAGGTTTGAGACTCACTGCAGAAGATTCTGGAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 72 bp | ACAGAAATGGACATGAAAACAACAGGCAGAGTTCCCTaGATACACAGTGAACATGGCCCTAGAAATAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: TEMDMKTTGRVP*IHSEHGPRNRA Trigger: AGCTCTATTTCTAGGGCCATGTTCACTGTGTATTCAGGGAACTCTGCCTGTTGTTTTCATGTCCATTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS GCA 72 bp | CAGATTCATGAAAAGTGGTCTGGCATTGTTCTGATTTaGGTCTCTTTATTTCTGAGGAAGGATGAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QIHEKWSGIVLI*VSLFLRKDEQL Trigger: GAGCTGCTCATCCTTCCTCAGAAATAAAGAGACGCAAATCAGAACAATGCCAGACCACTTTTCATGAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS CCA 72 bp | GATATAAATAAGGAACCGAATACAGTCCCTACCCTTTaGGGTTTACAACTGTATGGGAGAAAGACGAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: DINKEPNTVPTL*GLQLYGRKTSL Trigger: TAAGCTCGTCTTTCTCCCATACAGTTGTAAACCCCAAAGGGTAGGGACTGTATTCGGTTCCTTATTTATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 72 bp | TGTTCTGATTTGCGTCTCTTTATTTCTGAGGAAGGATaGGCAGCTCTTCATATGTTTCTTGGTCACTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: CSDLRLFISEEG*AALHMFLGHWY Trigger: ATACCAGTGACCAAGAAACATATGAAGAGCTGCTCATCCTTCCTCAGAAATAAAGAGACGCAAATCAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS GCA 72 bp | TTATCCAGGTTCCTATTGATGGACATTGAGGTTGTTTaGTATACAAATAATGCTGCTGTGGGCATCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: LSRFLLMDIEVV*YTNNAAVGIHS Trigger: AGAATGGATGCCCACAGCAGCATTATTTGTATAGCAAACAACCTCAATGTCCATCAATAGGAACCTGGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 72 bp | ATCACCACCCAGCAACAAGAGTCATTGCAAAATAACTaGAGTTCCTTATATGCGTTCTTAAATGCTGAAACA | + |
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Preference number: 6 (lower is better) Translates to: ITTQQQESLQNN*SSLYAFLNAET Trigger: TGTTTCAGCATTTAAGAACGCATATAAGGAACTTCAGTTATTTTGCAATGACTCTTGTTGCTGGGTGGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660467.1 |
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| CDS CAA 90 bp | ATTCAAGAGTTACATGATGAAGAGCAAACAAAACACATAATTCTTTaGCTAAAGTGGAGGATGCATTCCAAGGACATACTTCTTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: IQELHDEEQTKHIIL*LKWRMHSKDILLGL Trigger: CAAACCAAGAAGTATGTCCTTGGAATGCATCCTCCACTTTAGCAAAAGAATTATGTGTTTTGTTTGCTCTTCATCATGTAACTCTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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| CDS TCA 72 bp | AAGAGTGTGCCACAGTTTATTTATCCAGGTTCCTATTaGTGGACATTGAGGTTGTTTGCTATACAAATAATG | + |
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Preference number: 6 (lower is better) Translates to: KSVPQFIYPGSY*WTLRLFAIQIM Trigger: CATTATTTGTATAGCAAACAACCTCAATGTCCATCAATAGGAACCTGGATAAATAAACTGTGGCACACTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413591.1 |
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