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Pregenerated sensors for LINC00362 (Homo sapiens)

Ensembl gene IDs: ENSG00000229483

Ensembl transcript IDs: ENST00000414345.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TCCTCAGCCCTGTTCTCTGCTGCGTTGGCTGGCTTGTGTGGCTGCTaGCAAATCCAGGCTTCAAGCACTATCCGATTCAGGGCAAGCGAA +
Preference number: 5 (lower is better)
Translates to: SSALFSAALAGLCGC*QIQASSTIRFRASE
Trigger: TTCGCTTGCCCTGAATCGGATAGTGCTTGAAGCCTGGATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAGGGCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CCA 90 bp TTCTCTGTCCTCAGCCCTGTTCTCTGCTGCGTTGGCTGGCTTGTGTaGCTGCTGACAAATCCAGGCTTCAAGCACTATCCGATTCAGGGC +
Preference number: 5 (lower is better)
Translates to: FSVLSPVLCCVGWLV*LLTNPGFKHYPIQG
Trigger: GCCCTGAATCGGATAGTGCTTGAAGCCTGGATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAGGGCTGAGGACAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS GCA 90 bp AAGCATGGCCATCAGTTTTTCTCTGTCCTCAGCCCTGTTCTCTGCTaGGTTGGCTGGCTTGTGTGGCTGCTGACAAATCCAGGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: KHGHQFFSVLSPVLC*VGWLVWLLTNPGFK
Trigger: CTTGAAGCCTGGATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAGGGCTGAGGACAGAGAAAAACTGATGGCCATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CCA 90 bp CATCAGTTTTTCTCTGTCCTCAGCCCTGTTCTCTGCTGCGTTGGCTaGCTTGTGTGGCTGCTGACAAATCCAGGCTTCAAGCACTATCCG +
Preference number: 5 (lower is better)
Translates to: HQFFSVLSPVLCCVG*LVWLLTNPGFKHYP
Trigger: CGGATAGTGCTTGAAGCCTGGATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAGGGCTGAGGACAGAGAAAAACTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CCA 90 bp TGGCCATCAGTTTTTCTCTGTCCTCAGCCCTGTTCTCTGCTGCGTTaGCTGGCTTGTGTGGCTGCTGACAAATCCAGGCTTCAAGCACTA +
Preference number: 5 (lower is better)
Translates to: WPSVFLCPQPCSLLR*LACVAADKSRLQAL
Trigger: TAGTGCTTGAAGCCTGGATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAGGGCTGAGGACAGAGAAAAACTGATGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CCA 90 bp CGGAGAAGCACAAGATTGGGGCTGGTTTGGGCATGCCTTGATCCATaGCCTAAGCATGGCCATCAGTTTTTCTCTGTCCTCAGCCCTGTT +
Preference number: 5 (lower is better)
Translates to: RRSTRLGLVWACLDP*PKHGHQFFSVLSPV
Trigger: AACAGGGCTGAGGACAGAGAAAAACTGATGGCCATGCTTAGGCCATGGATCAAGGCATGCCCAAACCAGCCCCAATCTTGTGCTTCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CCA 72 bp TTCTCTGTCCTCAGCCCTGTTCTCTGCTGCGTTGGCTaGCTTGTGTGGCTGCTGACAAATCCAGGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: FSVLSPVLCCVG*LVWLLTNPGFK
Trigger: CTTGAAGCCTGGATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAGGGCTGAGGACAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS TCA 72 bp CTGTTCTCTGCTGCGTTGGCTGGCTTGTGTGGCTGCTaGCAAATCCAGGCTTCAAGCACTATCCGATTCAGG +
Preference number: 6 (lower is better)
Translates to: LFSAALAGLCGC*QIQASSTIRFR
Trigger: CCTGAATCGGATAGTGCTTGAAGCCTGGATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS GCA 72 bp CATCAGTTTTTCTCTGTCCTCAGCCCTGTTCTCTGCTaGGTTGGCTGGCTTGTGTGGCTGCTGACAAATCCA +
Preference number: 6 (lower is better)
Translates to: HQFFSVLSPVLC*VGWLVWLLTNP
Trigger: TGGATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAGGGCTGAGGACAGAGAAAAACTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CAA 90 bp TGGCATAACGGAGAAGCACAAGATTGGGGCTGGTTTGGGCATGCCTaGATCCATGGCCTAAGCATGGCCATCAGTTTTTCTCTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: WHNGEAQDWGWFGHA*IHGLSMAISFSLSS
Trigger: TGAGGACAGAGAAAAACTGATGGCCATGCTTAGGCCATGGATCAAGGCATGCCCAAACCAGCCCCAATCTTGTGCTTCTCCGTTATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CCA 72 bp ACAAGATTGGGGCTGGTTTGGGCATGCCTTGATCCATaGCCTAAGCATGGCCATCAGTTTTTCTCTGTCCTC +
Preference number: 6 (lower is better)
Translates to: TRLGLVWACLDP*PKHGHQFFSVL
Trigger: GAGGACAGAGAAAAACTGATGGCCATGCTTAGGCCATGGATCAAGGCATGCCCAAACCAGCCCCAATCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CCA 72 bp ATTGACTGGCATAACGGAGAAGCACAAGATTGGGGCTaGTTTGGGCATGCCTTGATCCATGGCCTAAGCATG +
Preference number: 6 (lower is better)
Translates to: IDWHNGEAQDWG*FGHALIHGLSM
Trigger: CATGCTTAGGCCATGGATCAAGGCATGCCCAAACCAGCCCCAATCTTGTGCTTCTCCGTTATGCCAGTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CAA 72 bp GGAGAAGCACAAGATTGGGGCTGGTTTGGGCATGCCTaGATCCATGGCCTAAGCATGGCCATCAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: GEAQDWGWFGHA*IHGLSMAISFS
Trigger: AGAAAAACTGATGGCCATGCTTAGGCCATGGATCAAGGCATGCCCAAACCAGCCCCAATCTTGTGCTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414345.2
CDS CCA 72 bp CAATTTATTGACTGGCATAACGGAGAAGCACAAGATTaGGGCTGGTTTGGGCATGCCTTGATCCATGGCCTA +
Preference number: 6 (lower is better)
Translates to: QFIDWHNGEAQD*GWFGHALIHGL
Trigger: TAGGCCATGGATCAAGGCATGCCCAAACCAGCCCCAATCTTGTGCTTCTCCGTTATGCCAGTCAATAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414345.2