Pregenerated sensors for LINC00358 (Homo sapiens)

Ensembl gene IDs: ENSG00000229578

Ensembl transcript IDs: ENST00000432697.2, ENST00000662481.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CCAGCTCTGGCTGTGACTCCCAAACTGGGTCATCCTCCAGGAAAATaGTCTCTCCAACCAACTGGGATCTGTAACTCCAATTCAGTCCTC	+
Preference number: 5 (lower is better) Translates to: PALAVTPKLGHPPGK*SLQPTGICNSNSVL Trigger: GAGGACTGAATTGGAGTTACAGATCCCAGTTGGTTGGAGAGACCATTTTCCTGGAGGATGACCCAGTTTGGGAGTCACAGCCAGAGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432697.2
CDS TCA 90 bp	CTCCTCCTGTTTGTAGTTCGACACCCACACAAGCTCAGCATTTTGTaGAGATCATCTCTTAACACTTCTTGGTCTCTAATATCCCACAAA	+
Preference number: 5 (lower is better) Translates to: LLLFVVRHPHKLSIL*RSSLNTSWSLISHK Trigger: TTTGTGGGATATTAGAGACCAAGAAGTGTTAAGAGATGATCTTCACAAAATGCTGAGCTTGTGTGGGTGTCGAACTACAAACAGGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432697.2 ENST00000662481.1
CDS CCA 72 bp	GCTGTGACTCCCAAACTGGGTCATCCTCCAGGAAAATaGTCTCTCCAACCAACTGGGATCTGTAACTCCAAT	+
Preference number: 6 (lower is better) Translates to: AVTPKLGHPPGK*SLQPTGICNSN Trigger: ATTGGAGTTACAGATCCCAGTTGGTTGGAGAGACCATTTTCCTGGAGGATGACCCAGTTTGGGAGTCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432697.2
CDS TCA 72 bp	AAGAGTGTGGATTATCTTTTATCCCAGCTCTGGCTGTaGCTCCCAAACTGGGTCATCCTCCAGGAAAATGGT	+
Preference number: 6 (lower is better) Translates to: KSVDYLLSQLWL*LPNWVILQENG Trigger: ACCATTTTCCTGGAGGATGACCCAGTTTGGGAGTCACAGCCAGAGCTGGGATAAAAGATAATCCACACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432697.2

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