Pregenerated sensors for LINC00354 (Homo sapiens)
Ensembl gene IDs: ENSG00000226903Ensembl transcript IDs: ENST00000412119.1, ENST00000440860.1, ENST00000655071.1, ENST00000655663.1, ENST00000661311.1, ENST00000662993.1, ENST00000663211.1, ENST00000664504.1, ENST00000668961.1, ENST00000670406.1, ENST00000670855.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGAGAAGACGCAGAGGGCGTCACCACAGCCATTACGAGGCCATCATaGAGCCAAACCCACACTTTCCGCAGCCAGCGGCAGGCAGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: GEDAEGVTTAITRPS*SQTHTFRSQRQAAR Trigger: CCGGGCTGCCTGCCGCTGGCTGCGGAAAGTGTGGGTTTGGCTGCATGATGGCCTCGTAATGGCTGTGGTGACGCCCTCTGCGTCTTCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS GCA 90 bp | CTCTGCCGGAGGCCGGTTAGACAGCAGGACGGAGTCACCCTGGAGTaGTGCTCTCTAGCCAGATCATTCCCTTCGCTCCCGGAGCGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LCRRPVRQQDGVTLE*CSLARSFPSLPERG Trigger: CCCACGCTCCGGGAGCGAAGGGAATGATCTGGCTAGAGAGCAGCACTCCAGGGTGACTCCGTCCTGCTGTCTAACCGGCCTCCGGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS GCA 90 bp | TGCCGGAGGCCGGTTAGACAGCAGGACGGAGTCACCCTGGAGTGCTaGTCTCTAGCCAGATCATTCCCTTCGCTCCCGGAGCGTGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: CRRPVRQQDGVTLEC*SLARSFPSLPERGR Trigger: TCTCCCACGCTCCGGGAGCGAAGGGAATGATCTGGCTAGAGAGCAGCACTCCAGGGTGACTCCGTCCTGCTGTCTAACCGGCCTCCGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS CCA 90 bp | TTTCTCGTGAGCCTACGCGAAGCAGTGCTGCCCCAGGGAAGCCCCTaGCAGCTCAGGCTTCCATGGAGTCCATGTCCACCTGACGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: FLVSLREAVLPQGSP*QLRLPWSPCPPDGR Trigger: TCGGCCGTCAGGTGGACATGGACTCCATGGAAGCCTGAGCTGCCAGGGGCTTCCCTGGGGCAGCACTGCTTCGCGTAGGCTCACGAGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668961.1 |
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| CDS GCA 90 bp | TCGTCTCAATCCCAAACGGCTCTCAAAAGAGGCTTCTGGTTTGCCTaGCCTTCGCCACGGGAGTGGGGAGCCACCGTCCCTCCCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: SSQSQTALKRGFWFA*PSPREWGATVPPTA Trigger: GGCTGTGGGAGGGACGGTGGCTCCCCACTCCCGTGGCGAAGGGCAGGCAAACCAGAAGCCTCTTTTGAGAGCCGTTTGGGATTGAGACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670406.1 |
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| CDS GCA 90 bp | CCACTCGTCTCAATCCCAAACGGCTCTCAAAAGAGGCTTCTGGTTTaGCTGCCCTTCGCCACGGGAGTGGGGAGCCACCGTCCCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: PLVSIPNGSQKRLLV*LPFATGVGSHRPSH Trigger: GTGGGAGGGACGGTGGCTCCCCACTCCCGTGGCGAAGGGCAGGCAAACCAGAAGCCTCTTTTGAGAGCCGTTTGGGATTGAGACGAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670406.1 |
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| CDS CCA 90 bp | TTTCTCGTGAGCCTACGCGAAGCAGTGCTGCCCCAGGGAAGCCCCTaGCAGCTCAGGCTTCCATGGAGTCCATGTCCACCCGAGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLVSLREAVLPQGSP*QLRLPWSPCPPEAS Trigger: AGAAGCCTCGGGTGGACATGGACTCCATGGAAGCCTGAGCTGCCAGGGGCTTCCCTGGGGCAGCACTGCTTCGCGTAGGCTCACGAGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655071.1 ENST00000655663.1 ENST00000662993.1 ENST00000670855.1 |
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| CDS TCA 90 bp | GCTCTTGCTGTGTCTTCCTTACCCAGGAACCCTGGAAGTTTCTCGTaGGCCTACGCGAAGCAGTGCTGCCCCAGGGAAGCCCCTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ALAVSSLPRNPGSFS*AYAKQCCPREAPGS Trigger: GCTGCCAGGGGCTTCCCTGGGGCAGCACTGCTTCGCGTAGGCTCACGAGAAACTTCCAGGGTTCCTGGGTAAGGAAGACACAGCAAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS GCA 90 bp | CCATGGAGTCCATGTCCACCCGAGGCTTCTCGATGGGACAGGCTGTaGTGCGCTCCGAGAAACGGACATTCTCTGGCTGTCACGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: PWSPCPPEASRWDRL*CAPRNGHSLAVTRV Trigger: GACCCTCGTGACAGCCAGAGAATGTCCGTTTCTCGGAGCGCAGCACAGCCTGTCCCATCGAGAAGCCTCGGGTGGACATGGACTCCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655071.1 ENST00000662993.1 ENST00000670855.1 |
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| CDS CCA 90 bp | GCGGCAGAGGCCAGCTCTTGCTGTGTCTTCCTTACCCAGGAACCCTaGAAGTTTCTCGTGAGCCTACGCGAAGCAGTGCTGCCCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: AAEASSCCVFLTQEP*KFLVSLREAVLPQG Trigger: TCCCTGGGGCAGCACTGCTTCGCGTAGGCTCACGAGAAACTTCCAGGGTTCCTGGGTAAGGAAGACACAGCAAGAGCTGGCCTCTGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS CCA 90 bp | TTTCTCGTGAGCCTACGCGAAGCAGTGCTGCCCCAGGGAAGCCCCTaGCAGCTCAGGCTTCCATGGAGTCCATGTCCACTCGTCTCAATC | + |
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Preference number: 5 (lower is better) Translates to: FLVSLREAVLPQGSP*QLRLPWSPCPLVSI Trigger: GATTGAGACGAGTGGACATGGACTCCATGGAAGCCTGAGCTGCCAGGGGCTTCCCTGGGGCAGCACTGCTTCGCGTAGGCTCACGAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670406.1 |
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| CDS CCA 90 bp | TTTCTCGTGAGCCTACGCGAAGCAGTGCTGCCCCAGGGAAGCCCCTaGCAGCTCAGGCTTCCATGGAGTCCATGTCCACCTTTCGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: FLVSLREAVLPQGSP*QLRLPWSPCPPFED Trigger: ATCTTCGAAAGGTGGACATGGACTCCATGGAAGCCTGAGCTGCCAGGGGCTTCCCTGGGGCAGCACTGCTTCGCGTAGGCTCACGAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663211.1 |
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| CDS TCA 90 bp | CGGGGGCTGCACAGAGGCCTTGCTGCGGCTGTGTCTGCTCCATCCTaGACCGATGATTACAGCCCCAGAGAACCTGATATTAAGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RGLHRGLAAAVSAPS*TDDYSPREPDIKLL Trigger: GAGCAGCTTAATATCAGGTTCTCTGGGGCTGTAATCATCGGTTCAGGATGGAGCAGACACAGCCGCAGCAAGGCCTCTGTGCAGCCCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000412119.1 ENST00000655071.1 ENST00000661311.1 ENST00000662993.1 ENST00000663211.1 ENST00000664504.1 ENST00000668961.1 ENST00000670406.1 ENST00000670855.1 |
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| CDS TCA 90 bp | AACTCAAGCAGCGGAGAGAGAGGTGCCCTAAAGATGGGCGTCTGGTaGCAAAGGCAGATGCGGCAGAGGCCAGCTCTTGCTGTGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: NSSSGERGALKMGVW*QRQMRQRPALAVSS Trigger: GGAAGACACAGCAAGAGCTGGCCTCTGCCGCATCTGCCTTTGTCACCAGACGCCCATCTTTAGGGCACCTCTCTCTCCGCTGCTTGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS TCA 90 bp | AGAGCAGAGACTTTGTGCTCGTTTAAAAACGTCAACTGCTTTGGGTaGACTGGCAGCAGGGGCATGGGCACAGCATCCCTCGGGCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: RAETLCSFKNVNCFG*TGSRGMGTASLGRG Trigger: GCCTCGCCCGAGGGATGCTGTGCCCATGCCCCTGCTGCCAGTTCACCCAAAGCAGTTGACGTTTTTAAACGAGCACAAAGTCTCTGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS CCA 90 bp | CTCGATGGGACAGGCTGTGCTGCGCTCCGAGAAACGGACATTCTCTaGCTGTCACGAGGGTCGTTAGAAAACAAGTCACTTCCGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LDGTGCAALRETDIL*LSRGSLENKSLPPA Trigger: TGCTGGCGGAAGTGACTTGTTTTCTAACGACCCTCGTGACAGCCAGAGAATGTCCGTTTCTCGGAGCGCAGCACAGCCTGTCCCATCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655071.1 ENST00000662993.1 |
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| CDS GCA 90 bp | GATGAAGAGACTGATGTTCAGAGTGGTTCAGAGAGTCAGATGATCTaGCACTCTGCCGGAGGCCGGTTAGACAGCAGGACGGAGTCACCC | + |
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Preference number: 5 (lower is better) Translates to: DEETDVQSGSESQMI*HSAGGRLDSRTESP Trigger: GGGTGACTCCGTCCTGCTGTCTAACCGGCCTCCGGCAGAGTGGCAGATCATCTGACTCTCTGAACCACTCTGAACATCAGTCTCTTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS GCA 90 bp | CCTGATATTAAGCTGCTCTTTGAGTCTTATCCAGGCATAATGTGCTaGTCTGTTGAAAGGCTGGCGCTGGGAGAAGACGCAGAGGGCGTC | + |
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Preference number: 5 (lower is better) Translates to: PDIKLLFESYPGIMC*SVERLALGEDAEGV Trigger: GACGCCCTCTGCGTCTTCTCCCAGCGCCAGCCTTTCAACAGAGCAGCACATTATGCCTGGATAAGACTCAAAGAGCAGCTTAATATCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS TCA 90 bp | TGTCCACCTGGTGCCCCATCACATGTCTGTGCTCTTCTGTCGAGTTaGTTTAACTTCGCCTGGGGTTCTCCAGCATTCAACTCCTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: CPPGAPSHVCALLSS*FNFAWGSPAFNSFG Trigger: TCCAAAGGAGTTGAATGCTGGAGAACCCCAGGCGAAGTTAAATCAACTCGACAGAAGAGCACAGACATGTGATGGGGCACCAGGTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS GCA 90 bp | GAACCTGATATTAAGCTGCTCTTTGAGTCTTATCCAGGCATAATGTaGTGCTCTGTTGAAAGGCTGGCGCTGGGAGAAGACGCAGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: EPDIKLLFESYPGIM*CSVERLALGEDAEG Trigger: GCCCTCTGCGTCTTCTCCCAGCGCCAGCCTTTCAACAGAGCAGCACATTATGCCTGGATAAGACTCAAAGAGCAGCTTAATATCAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS CCA 90 bp | CCTCTTCTCCCTGTATACTCTCGTGAGCCGGCTTTCCTCAGCTACTaGGGAACAGGATGTGATTTTTCTTACGCTGCGTTGAATGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PLLPVYSREPAFLSY*GTGCDFSYAALNAR Trigger: CCTTGCATTCAACGCAGCGTAAGAAAAATCACATCCTGTTCCCCAGTAGCTGAGGAAAGCCGGCTCACGAGAGTATACAGGGAGAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000440860.1 ENST00000655071.1 ENST00000655663.1 ENST00000661311.1 ENST00000662993.1 ENST00000664504.1 ENST00000668961.1 |
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| CDS GCA 90 bp | GTCCATGTCCACCTTTCGAAGATCTCTGCAGGGCGGGCTTGTGGATaGCTGCTAATCCTTAGCTGCAGAGAAACATTCTTCTCAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: VHVHLSKISAGRACG*LLILSCRETFFSNR Trigger: TCTGTTTGAGAAGAATGTTTCTCTGCAGCTAAGGATTAGCAGGCATCCACAAGCCCGCCCTGCAGAGATCTTCGAAAGGTGGACATGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663211.1 |
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| CDS GCA 90 bp | CCTGATATTAAGCTGCTCTTTGAGTCTTATCCAGGCATAATGTGCTaGTCTGTTGAAAGGCTGGCGCCAGGAACCCTGGAAGTTTCTCGT | + |
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Preference number: 5 (lower is better) Translates to: PDIKLLFESYPGIMC*SVERLAPGTLEVSR Trigger: ACGAGAAACTTCCAGGGTTCCTGGCGCCAGCCTTTCAACAGAGCAGCACATTATGCCTGGATAAGACTCAAAGAGCAGCTTAATATCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000412119.1 ENST00000655071.1 ENST00000661311.1 ENST00000664504.1 ENST00000668961.1 ENST00000670855.1 |
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| CDS GCA 90 bp | GAACCTGATATTAAGCTGCTCTTTGAGTCTTATCCAGGCATAATGTaGTGCTCTGTTGAAAGGCTGGCGCCAGGAACCCTGGAAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: EPDIKLLFESYPGIM*CSVERLAPGTLEVS Trigger: AGAAACTTCCAGGGTTCCTGGCGCCAGCCTTTCAACAGAGCAGCACATTATGCCTGGATAAGACTCAAAGAGCAGCTTAATATCAGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000412119.1 ENST00000655071.1 ENST00000661311.1 ENST00000664504.1 ENST00000668961.1 ENST00000670855.1 |
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| CDS GCA 90 bp | TGTCCTTCTAGAAGCTGGTCGCAGGTTGAGCAGGGATCAGAAAGCTaGATCAAGTTGACCCAGTCACTCACATTTAATATTAGGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: CPSRSWSQVEQGSES*IKLTQSLTFNIRLV Trigger: CACCAACCTAATATTAAATGTGAGTGACTGGGTCAACTTGATGCAGCTTTCTGATCCCTGCTCAACCTGCGACCAGCTTCTAGAAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS CCA 90 bp | ACCCAAATGACCTTTGCTGGGGTGTTGATCCTGGCTAATTGTTCTTaGGCTGAGAGTTTGATAAGAAGTTTGCAAGGTTCAGCTGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: TQMTFAGVLILANCS*AESLIRSLQGSAVW Trigger: CCACACAGCTGAACCTTGCAAACTTCTTATCAAACTCTCAGCCCAAGAACAATTAGCCAGGATCAACACCCCAGCAAAGGTCATTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663211.1 |
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| CDS TCA 72 bp | ACCCACACTTTCCGCAGCCAGCGGCAGGCAGCCCGGTaGAGGGGGCGATTAGAAACCGGGCCCAGCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: THTFRSQRQAAR*RGRLETGPSPP Trigger: TGGAGGGCTGGGCCCGGTTTCTAATCGCCCCCTTCACCGGGCTGCCTGCCGCTGGCTGCGGAAAGTGTGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS CCA 72 bp | ACGTCAACTGCTTTGGGTGAACTGGCAGCAGGGGCATaGGCACAGCATCCCTCGGGCGAGGCAGGCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: TSTALGELAAGA*AQHPSGEAGTL Trigger: GAGGGTGCCTGCCTCGCCCGAGGGATGCTGTGCCCATGCCCCTGCTGCCAGTTCACCCAAAGCAGTTGACGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS CAA 90 bp | TCCACTCGTCTCAATCCCAAACGGCTCTCAAAAGAGGCTTCTGGTTaGCCTGCCCTTCGCCACGGGAGTGGGGAGCCACCGTCCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: STRLNPKRLSKEASG*PALRHGSGEPPSLP Trigger: TGGGAGGGACGGTGGCTCCCCACTCCCGTGGCGAAGGGCAGGCAAACCAGAAGCCTCTTTTGAGAGCCGTTTGGGATTGAGACGAGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670406.1 |
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| CDS GCA 72 bp | CCATGTCCACCCGAGGCTTCTCGATGGGACAGGCTGTaGTGCGCTCCGAGAAACGGACATTCTCTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PCPPEASRWDRL*CAPRNGHSLAV Trigger: GACAGCCAGAGAATGTCCGTTTCTCGGAGCGCAGCACAGCCTGTCCCATCGAGAAGCCTCGGGTGGACATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655071.1 ENST00000662993.1 ENST00000670855.1 |
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| CDS GCA 72 bp | CCGGTTAGACAGCAGGACGGAGTCACCCTGGAGTGCTaGTCTCTAGCCAGATCATTCCCTTCGCTCCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PVRQQDGVTLEC*SLARSFPSLPE Trigger: CTCCGGGAGCGAAGGGAATGATCTGGCTAGAGAGCAGCACTCCAGGGTGACTCCGTCCTGCTGTCTAACCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS GCA 72 bp | AGGCCGGTTAGACAGCAGGACGGAGTCACCCTGGAGTaGTGCTCTCTAGCCAGATCATTCCCTTCGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: RPVRQQDGVTLE*CSLARSFPSLP Trigger: CGGGAGCGAAGGGAATGATCTGGCTAGAGAGCAGCACTCCAGGGTGACTCCGTCCTGCTGTCTAACCGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS CAA 72 bp | CTCAATCCCAAACGGCTCTCAAAAGAGGCTTCTGGTTaGCCTGCCCTTCGCCACGGGAGTGGGGAGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: LNPKRLSKEASG*PALRHGSGEPP Trigger: CGGTGGCTCCCCACTCCCGTGGCGAAGGGCAGGCAAACCAGAAGCCTCTTTTGAGAGCCGTTTGGGATTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670406.1 |
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| CDS TCA 72 bp | GTGTCTTCCTTACCCAGGAACCCTGGAAGTTTCTCGTaGGCCTACGCGAAGCAGTGCTGCCCCAGGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: VSSLPRNPGSFS*AYAKQCCPREA Trigger: GGCTTCCCTGGGGCAGCACTGCTTCGCGTAGGCTCACGAGAAACTTCCAGGGTTCCTGGGTAAGGAAGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS GCA 72 bp | TCAGAGTGGTTCAGAGAGTCAGATGATCTGCCACTCTaGCGGAGGCCGGTTAGACAGCAGGACGGAGTCACC | + |
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Preference number: 6 (lower is better) Translates to: SEWFRESDDLPL*RRPVRQQDGVT Trigger: GGTGACTCCGTCCTGCTGTCTAACCGGCCTCCGGCAGAGTGGCAGATCATCTGACTCTCTGAACCACTCTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS CCA 72 bp | GCCAGCTCTTGCTGTGTCTTCCTTACCCAGGAACCCTaGAAGTTTCTCGTGAGCCTACGCGAAGCAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASSCCVFLTQEP*KFLVSLREAVL Trigger: CAGCACTGCTTCGCGTAGGCTCACGAGAAACTTCCAGGGTTCCTGGGTAAGGAAGACACAGCAAGAGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS TCA 72 bp | TTTCATTCATTTCCCAGGAACCCTGGAAGTTTCTCGTaGGCCTACGCGAAGCAGTGCTGCCCCAGGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: FHSFPRNPGSFS*AYAKQCCPREA Trigger: GGCTTCCCTGGGGCAGCACTGCTTCGCGTAGGCTCACGAGAAACTTCCAGGGTTCCTGGGAAATGAATGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440860.1 ENST00000655663.1 |
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| CDS TCA 72 bp | CACACAATGCTGGCCTCTTCTCCCTGTATACTCTCGTaGGCCGGCTTTCCTCAGCTACTGGGGAACAGGATG | + |
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Preference number: 6 (lower is better) Translates to: HTMLASSPCILS*AGFPQLLGNRM Trigger: CATCCTGTTCCCCAGTAGCTGAGGAAAGCCGGCTCACGAGAGTATACAGGGAGAAGAGGCCAGCATTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000440860.1 ENST00000655071.1 ENST00000655663.1 ENST00000661311.1 ENST00000662993.1 ENST00000664504.1 ENST00000668961.1 ENST00000670855.1 |
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| CDS GCA 72 bp | CTATGTGCTCTGAACCTTTTCCTACGCGGGGCAGGGTaGTTTGAGCCTCGCCTGGGAGGCCTTAATGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LCALNLFLRGAG*FEPRLGGLNEV Trigger: AACTTCATTAAGGCCTCCCAGGCGAGGCTCAAAGCACCCTGCCCCGCGTAGGAAAAGGTTCAGAGCACATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS CAA 72 bp | CACAAGAGGGGCCAGAAACATCTCTCTGTTGTTCTCTaGCCCTTAAGACCCACGGCCACAGGCCACTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HKRGQKHLSVVL*PLRPTATGHSC Trigger: ACAGGAGTGGCCTGTGGCCGTGGGTCTTAAGGGCAAGAGAACAACAGAGAGATGTTTCTGGCCCCTCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS CAA 90 bp | TCTGAAGAGCAGAGACTTTGTGCTCGTTTAAAAACGTCAACTGCTTaGGGTGAACTGGCAGCAGGGGCATGGGCACAGCATCCCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: SEEQRLCARLKTSTA*GELAAGAWAQHPSG Trigger: GCCCGAGGGATGCTGTGCCCATGCCCCTGCTGCCAGTTCACCCAAAGCAGTTGACGTTTTTAAACGAGCACAAAGTCTCTGCTCTTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS TCA 72 bp | CACAGAGGCCTTGCTGCGGCTGTGTCTGCTCCATCCTaGACCGATGATTACAGCCCCAGAGAACCTGATATT | + |
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Preference number: 6 (lower is better) Translates to: HRGLAAAVSAPS*TDDYSPREPDI Trigger: AATATCAGGTTCTCTGGGGCTGTAATCATCGGTTCAGGATGGAGCAGACACAGCCGCAGCAAGGCCTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000412119.1 ENST00000655071.1 ENST00000661311.1 ENST00000662993.1 ENST00000663211.1 ENST00000664504.1 ENST00000668961.1 ENST00000670406.1 ENST00000670855.1 |
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| CDS GCA 72 bp | GGCAAGACCCTAAAACTCAAGCAGCGGAGAGAGAGGTaGCCTAAAGATGGGCGTCTGGTGACAAAGGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: GKTLKLKQRRER*PKDGRLVTKAD Trigger: ATCTGCCTTTGTCACCAGACGCCCATCTTTAGGGCACCTCTCTCTCCGCTGCTTGAGTTTTAGGGTCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS GCA 72 bp | GGCGCATCCCTAGAGAACGGGGAGGAGAGTCTCCTGTaGCGTGATCCAGGGTTTCTTTTTGGTTTAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: GASLENGEESLL*RDPGFLFGLMN Trigger: GTTCATTAAACCAAAAAGAAACCCTGGATCACGGCACAGGAGACTCTCCTCCCCGTTCTCTAGGGATGCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662993.1 |
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| CDS CCA 72 bp | ACAGGCTGTGCTGCGCTCCGAGAAACGGACATTCTCTaGCTGTCACGAGGGTCGTTAGAAAACAAGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: TGCAALRETDIL*LSRGSLENKSL Trigger: AAGTGACTTGTTTTCTAACGACCCTCGTGACAGCCAGAGAATGTCCGTTTCTCGGAGCGCAGCACAGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655071.1 ENST00000662993.1 |
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| CDS CAA 90 bp | TTCATTTCACACAAGAGGGGCCAGAAACATCTCTCTGTTGTTCTCTaGCCCTTAAGACCCACGGCCACAGGCCACTCCTGTCCTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: FISHKRGQKHLSVVL*PLRPTATGHSCPSR Trigger: TCTAGAAGGACAGGAGTGGCCTGTGGCCGTGGGTCTTAAGGGCAAGAGAACAACAGAGAGATGTTTCTGGCCCCTCTTGTGTGAAATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS TCA 72 bp | GGTGCCCCATCACATGTCTGTGCTCTTCTGTCGAGTTaGTTTAACTTCGCCTGGGGTTCTCCAGCATTCAAC | + |
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Preference number: 6 (lower is better) Translates to: GAPSHVCALLSS*FNFAWGSPAFN Trigger: GTTGAATGCTGGAGAACCCCAGGCGAAGTTAAATCAACTCGACAGAAGAGCACAGACATGTGATGGGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS GCA 72 bp | AAGCTGCTCTTTGAGTCTTATCCAGGCATAATGTGCTaGTCTGTTGAAAGGCTGGCGCCAGGAACCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: KLLFESYPGIMC*SVERLAPGTLE Trigger: TTCCAGGGTTCCTGGCGCCAGCCTTTCAACAGAGCAGCACATTATGCCTGGATAAGACTCAAAGAGCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000412119.1 ENST00000655071.1 ENST00000661311.1 ENST00000664504.1 ENST00000668961.1 ENST00000670855.1 |
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| CDS GCA 72 bp | AAGCTGCTCTTTGAGTCTTATCCAGGCATAATGTGCTaGTCTGTTGAAAGGCTGGCGCTGGGAGAAGACGCA | + |
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Preference number: 6 (lower is better) Translates to: KLLFESYPGIMC*SVERLALGEDA Trigger: TGCGTCTTCTCCCAGCGCCAGCCTTTCAACAGAGCAGCACATTATGCCTGGATAAGACTCAAAGAGCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS GCA 72 bp | CACCTTTCGAAGATCTCTGCAGGGCGGGCTTGTGGATaGCTGCTAATCCTTAGCTGCAGAGAAACATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HLSKISAGRACG*LLILSCRETFF Trigger: GAAGAATGTTTCTCTGCAGCTAAGGATTAGCAGGCATCCACAAGCCCGCCCTGCAGAGATCTTCGAAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663211.1 |
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| CDS CCA 72 bp | CCTGTATACTCTCGTGAGCCGGCTTTCCTCAGCTACTaGGGAACAGGATGTGATTTTTCTTACGCTGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: PVYSREPAFLSY*GTGCDFSYAAL Trigger: CAACGCAGCGTAAGAAAAATCACATCCTGTTCCCCAGTAGCTGAGGAAAGCCGGCTCACGAGAGTATACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000440860.1 ENST00000655071.1 ENST00000655663.1 ENST00000661311.1 ENST00000662993.1 ENST00000664504.1 ENST00000668961.1 |
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| CDS GCA 72 bp | ATTAAGCTGCTCTTTGAGTCTTATCCAGGCATAATGTaGTGCTCTGTTGAAAGGCTGGCGCCAGGAACCCTG | + |
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Preference number: 6 (lower is better) Translates to: IKLLFESYPGIM*CSVERLAPGTL Trigger: CAGGGTTCCTGGCGCCAGCCTTTCAACAGAGCAGCACATTATGCCTGGATAAGACTCAAAGAGCAGCTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000412119.1 ENST00000655071.1 ENST00000661311.1 ENST00000664504.1 ENST00000668961.1 ENST00000670855.1 |
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| CDS CCA 72 bp | TTTGAGCCTCGCCTGGGAGGCCTTAATGAAGTTTTATaGCAAGACCCTAAAACTCAAGCAGCGGAGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: FEPRLGGLNEVL*QDPKTQAAERE Trigger: CTCTCTCTCCGCTGCTTGAGTTTTAGGGTCTTGCCATAAAACTTCATTAAGGCCTCCCAGGCGAGGCTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS GCA 72 bp | ATTAAGCTGCTCTTTGAGTCTTATCCAGGCATAATGTaGTGCTCTGTTGAAAGGCTGGCGCTGGGAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: IKLLFESYPGIM*CSVERLALGED Trigger: GTCTTCTCCCAGCGCCAGCCTTTCAACAGAGCAGCACATTATGCCTGGATAAGACTCAAAGAGCAGCTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662993.1 ENST00000663211.1 ENST00000670406.1 |
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| CDS CCA 72 bp | CCTGTATACTCTCGTGAGCCGGCTTTCCTCAGCTACTaGGGAACAGGATGTGATTTTTCTTACGAAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: PVYSREPAFLSY*GTGCDFSYEKC Trigger: GCACTTTTCGTAAGAAAAATCACATCCTGTTCCCCAGTAGCTGAGGAAAGCCGGCTCACGAGAGTATACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670855.1 |
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| CDS CAA 90 bp | TTGATCCTGGCTAATTGTTCTTGGGCTGAGAGTTTGATAAGAAGTTaGCAAGGTTCAGCTGTGTGGCCACTGGGACTTCAGGAAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: LILANCSWAESLIRS*QGSAVWPLGLQETG Trigger: GCCTGTTTCCTGAAGTCCCAGTGGCCACACAGCTGAACCTTGCAAACTTCTTATCAAACTCTCAGCCCAAGAACAATTAGCCAGGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663211.1 |
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| CDS TCA 72 bp | CGCAGGTTGAGCAGGGATCAGAAAGCTGCATCAAGTTaGCCCAGTCACTCACATTTAATATTAGGTTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RRLSRDQKAASS*PSHSHLILGWW Trigger: CCACCAACCTAATATTAAATGTGAGTGACTGGGTCAACTTGATGCAGCTTTCTGATCCCTGCTCAACCTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS CAA 72 bp | GCTAATTGTTCTTGGGCTGAGAGTTTGATAAGAAGTTaGCAAGGTTCAGCTGTGTGGCCACTGGGACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ANCSWAESLIRS*QGSAVWPLGLQ Trigger: CTGAAGTCCCAGTGGCCACACAGCTGAACCTTGCAAACTTCTTATCAAACTCTCAGCCCAAGAACAATTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663211.1 |
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| CDS GCA 72 bp | AGAAGCTGGTCGCAGGTTGAGCAGGGATCAGAAAGCTaGATCAAGTTGACCCAGTCACTCACATTTAATATT | + |
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Preference number: 6 (lower is better) Translates to: RSWSQVEQGSES*IKLTQSLTFNI Trigger: AATATTAAATGTGAGTGACTGGGTCAACTTGATGCAGCTTTCTGATCCCTGCTCAACCTGCGACCAGCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS CAA 72 bp | TCGCAGGTTGAGCAGGGATCAGAAAGCTGCATCAAGTaGACCCAGTCACTCACATTTAATATTAGGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SQVEQGSESCIK*TQSLTFNIRLV Trigger: CACCAACCTAATATTAAATGTGAGTGACTGGGTCAACTTGATGCAGCTTTCTGATCCCTGCTCAACCTGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661311.1 |
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| CDS TCA 72 bp | CATTCATTTCCTATGGATACAGGCAGATGTGTAAGTTaGGCTTTAACTCACAAAAGTGCCCACGGATGCGTT | + |
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Preference number: 6 (lower is better) Translates to: HSFPMDTGRCVS*ALTHKSAHGCV Trigger: AACGCATCCGTGGGCACTTTTGTGAGTTAAAGCTCAACTTACACATCTGCCTGTATCCATAGGAAATGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412119.1 ENST00000655071.1 ENST00000661311.1 ENST00000662993.1 ENST00000663211.1 ENST00000664504.1 ENST00000668961.1 ENST00000670406.1 |
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| CDS CAA 72 bp | TCATTCATTTCCTATGGATACAGGCAGATGTGTAAGTaGAGCTTTAACTCACAAAAGTGCCCACGGATGCGT | + |
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Preference number: 6 (lower is better) Translates to: SFISYGYRQMCK*SFNSQKCPRMR Trigger: ACGCATCCGTGGGCACTTTTGTGAGTTAAAGCTCAACTTACACATCTGCCTGTATCCATAGGAAATGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412119.1 ENST00000655071.1 ENST00000661311.1 ENST00000662993.1 ENST00000663211.1 ENST00000664504.1 ENST00000668961.1 ENST00000670406.1 |
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