Pregenerated sensors for LINC00348 (Homo sapiens)
Ensembl gene IDs: ENSG00000226846Ensembl transcript IDs: ENST00000428761.2, ENST00000653160.1, ENST00000653878.1, ENST00000655045.1, ENST00000655546.1, ENST00000656251.1, ENST00000658800.1, ENST00000659244.1, ENST00000660222.1, ENST00000661523.1, ENST00000662353.1, ENST00000663997.1, ENST00000664823.1, ENST00000665820.1, ENST00000666881.1, ENST00000667632.1, ENST00000668650.1, ENST00000671240.1, ENST00000671477.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCAAAGAGGGACTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCGGGCTGCATTCCAGACAGTTGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: AKEGLCPFFRLKHRC*SHSTDRAAFQTVVK Trigger: CTTAACAACTGTCTGGAATGCAGCCCGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGTCCCTCTTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667632.1 |
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| CDS GCA 90 bp | ACCCTGACACACGTGAGCAGTGATTTGGAGCCGCTGCAAGAGCACTaGAACAGACAGGAAACTCATGCTGTGTTGCTTACTCTCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TLTHVSSDLEPLQEH*NRQETHAVLLTLLP Trigger: GGGCAGGAGAGTAAGCAACACAGCATGAGTTTCCTGTCTGTTGCAGTGCTCTTGCAGCGGCTCCAAATCACTGCTCACGTGTGTCAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668650.1 |
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| CDS TCA 90 bp | TGCTGCAGCCACTCCACAGATATAAACCCTGACACACGTGAGCAGTaGTTTGGAGCCGCTGCAAGAGCACTGCAACAGACAGGAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: CCSHSTDINPDTREQ*FGAAARALQQTGNS Trigger: TGAGTTTCCTGTCTGTTGCAGTGCTCTTGCAGCGGCTCCAAATCACTGCTCACGTGTGTCAGGGTTTATATCTGTGGAGTGGCTGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668650.1 |
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| CDS GCA 90 bp | CATCCATTCAGTCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCGGGCTGCATTCCAGACAGTTGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: HPFSLCPFFRLKHRC*SHSTDRAAFQTVVK Trigger: CTTAACAACTGTCTGGAATGCAGCCCGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGACTGAATGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653878.1 |
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| CDS GCA 90 bp | GCCAAAGAGGGACTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCATCACAGGGATCATGTGTTATTGTTC | + |
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Preference number: 5 (lower is better) Translates to: AKEGLCPFFRLKHRC*SHSTDHHRDHVLLF Trigger: GAACAATAACACATGATCCCTGTGATGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGTCCCTCTTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656251.1 ENST00000659244.1 |
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| CDS GCA 90 bp | ATCATGAAATATCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCGGGCTGCATTCCAGACAGTTGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: IMKYLCPFFRLKHRC*SHSTDRAAFQTVVK Trigger: CTTAACAACTGTCTGGAATGCAGCCCGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGATATTTCATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428761.2 |
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| CDS GCA 90 bp | CATCCATTCAGTCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCATCACAGGGATCATGTGTTATTGTTC | + |
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Preference number: 5 (lower is better) Translates to: HPFSLCPFFRLKHRC*SHSTDHHRDHVLLF Trigger: GAACAATAACACATGATCCCTGTGATGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGACTGAATGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671240.1 |
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| CDS CCA 90 bp | CATGGAGTCTCTGCTATTTTCAACCTGTGGCTCTGCAATCCGTTTTaGTATCAGGATCCTCTGCTGGAATATCTGCATATAGCGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HGVSAIFNLWLCNPF*YQDPLLEYLHIAGC Trigger: GCAGCCCGCTATATGCAGATATTCCAGCAGAGGATCCTGATACCAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656251.1 ENST00000660222.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS TCA 90 bp | CACAGATCATCACAGGGATCATGTGTTATTGTTCCATGCAATCATTaGGGGAACCATGGAGTCTCTGCTATTTTCAACCTGTGGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: HRSSQGSCVIVPCNH*GNHGVSAIFNLWLC Trigger: GCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGTGATGATCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656251.1 ENST00000659244.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS GCA 90 bp | ATCATGAAATATCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCATCACAGGGATCATGTGTTATTGTTC | + |
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Preference number: 5 (lower is better) Translates to: IMKYLCPFFRLKHRC*SHSTDHHRDHVLLF Trigger: GAACAATAACACATGATCCCTGTGATGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGATATTTCATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662353.1 ENST00000664823.1 |
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| CDS CCA 90 bp | ATTCTTCCTCATGGTGTTATATTCCTCATTTCCAGTGTGATGGTATaGCAGCATCCATTCAGTCTGCCAAAGAGGGACTGTGCCCATTCT | + |
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Preference number: 5 (lower is better) Translates to: ILPHGVIFLISSVMV*QHPFSLPKRDCAHS Trigger: AGAATGGGCACAGTCCCTCTTTGGCAGACTGAATGGATGCTGCCATACCATCACACTGGAAATGAGGAATATAACACCATGAGGAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653160.1 ENST00000656251.1 ENST00000659244.1 ENST00000667632.1 ENST00000668650.1 |
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| CDS TCA 90 bp | AAACAACCATTCTTCCTCATGGTGTTATATTCCTCATTTCCAGTGTaGTGGTATGGCAGCATCCATTCAGTCTGTGCCCATTCTTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: KQPFFLMVLYSSFPV*WYGSIHSVCAHSSG Trigger: GCCTGAAGAATGGGCACAGACTGAATGGATGCTGCCATACCATCACACTGGAAATGAGGAATATAACACCATGAGGAAGAATGGTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653878.1 ENST00000671240.1 |
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| CDS TCA 90 bp | AAACAACCATTCTTCCTCATGGTGTTATATTCCTCATTTCCAGTGTaGTGGTATGGCAGCATCCATTCAGTCTGCCAAAGAGGGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: KQPFFLMVLYSSFPV*WYGSIHSVCQRGTV Trigger: CACAGTCCCTCTTTGGCAGACTGAATGGATGCTGCCATACCATCACACTGGAAATGAGGAATATAACACCATGAGGAAGAATGGTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653160.1 ENST00000656251.1 ENST00000659244.1 ENST00000667632.1 ENST00000668650.1 |
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| CDS CCA 90 bp | ACAGGGATCATGTGTTATTGTTCCATGCAATCATTGAGGGAACCATaGAGTCTCTGCTATTTTCAACCTGTGGCTCTGCAATCCGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: TGIMCYCSMQSLREP*SLCYFQPVALQSVL Trigger: CAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000655045.1 ENST00000656251.1 ENST00000659244.1 ENST00000660222.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS TCA 90 bp | GAAATATCATCACAGGGATCATGTGTTATTGTTCCATGCAATCATTaGGGGAACCATGGAGTCTCTGCTATTTTCAACCTGTGGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: EISSQGSCVIVPCNH*GNHGVSAIFNLWLC Trigger: GCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGTGATGATATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655045.1 ENST00000660222.1 |
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| CDS GCA 90 bp | ATGTGTTATTGTTCCATGCAATCATTGAGGGAACCATGGAGTCTCTaGTATTTTCAACCTGTGGCTCTGCAATCCGTTTTGGTATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: MCYCSMQSLREPWSL*YFQPVALQSVLVSG Trigger: TCCTGATACCAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000655045.1 ENST00000656251.1 ENST00000659244.1 ENST00000660222.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CCA 90 bp | TGTTTCACAGAAGGTAGAGAGAATAATAACCAGTCAACAAGGTGGTaGATGGTTAAGAAAGCTTCTAGTCTTCAAGAAAATCCAAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: CFTEGRENNNQSTRW*MVKKASSLQENPKH Trigger: ATGCTTTGGATTTTCTTGAAGACTAGAAGCTTTCTTAACCATCCACCACCTTGTTGACTGGTTATTATTCTCTCTACCTTCTGTGAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000428761.2 ENST00000653160.1 ENST00000653878.1 ENST00000655045.1 ENST00000655546.1 ENST00000656251.1 ENST00000658800.1 ENST00000659244.1 ENST00000660222.1 ENST00000661523.1 ENST00000662353.1 ENST00000663997.1 ENST00000664823.1 ENST00000665820.1 ENST00000666881.1 ENST00000667632.1 ENST00000668650.1 ENST00000671240.1 ENST00000671477.1 |
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| CDS CCA 90 bp | GTTTGTTTCACAGAAGGTAGAGAGAATAATAACCAGTCAACAAGGTaGTGGATGGTTAAGAAAGCTTCTAGTCTTCAAGAAAATCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: VCFTEGRENNNQSTR*WMVKKASSLQENPK Trigger: CTTTGGATTTTCTTGAAGACTAGAAGCTTTCTTAACCATCCACCACCTTGTTGACTGGTTATTATTCTCTCTACCTTCTGTGAAACAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000428761.2 ENST00000653160.1 ENST00000653878.1 ENST00000655045.1 ENST00000655546.1 ENST00000656251.1 ENST00000658800.1 ENST00000659244.1 ENST00000660222.1 ENST00000661523.1 ENST00000662353.1 ENST00000663997.1 ENST00000664823.1 ENST00000665820.1 ENST00000666881.1 ENST00000667632.1 ENST00000668650.1 ENST00000671240.1 ENST00000671477.1 |
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| CDS GCA 72 bp | GGACTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCGGGCTGCATTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: GLCPFFRLKHRC*SHSTDRAAFQT Trigger: TGTCTGGAATGCAGCCCGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667632.1 |
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| CDS GCA 72 bp | AGTCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCGGGCTGCATTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: SLCPFFRLKHRC*SHSTDRAAFQT Trigger: TGTCTGGAATGCAGCCCGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653878.1 |
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| CDS GCA 72 bp | TATCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCGGGCTGCATTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: YLCPFFRLKHRC*SHSTDRAAFQT Trigger: TGTCTGGAATGCAGCCCGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428761.2 |
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| CDS GCA 72 bp | GGACTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCATCACAGGGATCATGTG | + |
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Preference number: 6 (lower is better) Translates to: GLCPFFRLKHRC*SHSTDHHRDHV Trigger: CACATGATCCCTGTGATGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656251.1 ENST00000659244.1 |
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| CDS GCA 72 bp | AGTCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCATCACAGGGATCATGTG | + |
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Preference number: 6 (lower is better) Translates to: SLCPFFRLKHRC*SHSTDHHRDHV Trigger: CACATGATCCCTGTGATGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671240.1 |
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| CDS GCA 72 bp | GGACTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATATAAACCCTGACACACGT | + |
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Preference number: 6 (lower is better) Translates to: GLCPFFRLKHRC*SHSTDINPDTR Trigger: ACGTGTGTCAGGGTTTATATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668650.1 |
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| CDS CAA 90 bp | ACAGGTGCTGCAGCCACTCCACAGATCGGGCTGCATTCCAGACAGTaGTTAAGGCATTCTAAGTCACAGGATGAGATAGGAGGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: TGAAATPQIGLHSRQ*LRHSKSQDEIGGQH Trigger: GTGCTGACCTCCTATCTCATCCTGTGACTTAGAATGCCTTAACAACTGTCTGGAATGCAGCCCGATCTGTGGAGTGGCTGCAGCACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000428761.2 ENST00000653878.1 ENST00000667632.1 ENST00000671477.1 |
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| CDS GCA 72 bp | GGACTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCTTGACAGAAAAGGACAT | + |
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Preference number: 6 (lower is better) Translates to: GLCPFFRLKHRC*SHSTDLDRKGH Trigger: ATGTCCTTTTCTGTCAAGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653160.1 |
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| CDS GCA 72 bp | TATCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCATCACAGGGATCATGTG | + |
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Preference number: 6 (lower is better) Translates to: YLCPFFRLKHRC*SHSTDHHRDHV Trigger: CACATGATCCCTGTGATGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662353.1 ENST00000664823.1 |
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| CDS GCA 72 bp | CACGTGAGCAGTGATTTGGAGCCGCTGCAAGAGCACTaGAACAGACAGGAAACTCATGCTGTGTTGCTTACT | + |
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Preference number: 6 (lower is better) Translates to: HVSSDLEPLQEH*NRQETHAVLLT Trigger: AGTAAGCAACACAGCATGAGTTTCCTGTCTGTTGCAGTGCTCTTGCAGCGGCTCCAAATCACTGCTCACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668650.1 |
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| CDS TCA 72 bp | TTATGTGGGAGCAATCTTTACCCAGGAAAGCCCACTTaGGTCTTGGACTCCAACATGGTGCAGACCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LCGSNLYPGKPT*VLDSNMVQTPN Trigger: GTTTGGGGTCTGCACCATGTTGGAGTCCAAGACTCAAGTGGGCTTTCCTGGGTAAAGATTGCTCCCACATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658800.1 |
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| CDS CAA 90 bp | CCATGGAGTCTCTGCTATTTTCAACCTGTGGCTCTGCAATCCGTTTaGGTATCAGGATCCTCTGCTGGAATATCTGCATATAGCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PWSLCYFQPVALQSV*VSGSSAGISAYSGL Trigger: CAGCCCGCTATATGCAGATATTCCAGCAGAGGATCCTGATACCAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656251.1 ENST00000660222.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS GCA 72 bp | TATCTGTGCCCATTCTTCAGGCTGAAACACAGGTGCTaGAGCCACTCCACAGATCTTGACAGAAAAGGACAT | + |
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Preference number: 6 (lower is better) Translates to: YLCPFFRLKHRC*SHSTDLDRKGH Trigger: ATGTCCTTTTCTGTCAAGATCTGTGGAGTGGCTGCAGCACCTGTGTTTCAGCCTGAAGAATGGGCACAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663997.1 |
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| CDS CAA 72 bp | ATTATGTGGGAGCAATCTTTACCCAGGAAAGCCCACTaGAGTCTTGGACTCCAACATGGTGCAGACCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: IMWEQSLPRKAH*SLGLQHGADPK Trigger: TTTGGGGTCTGCACCATGTTGGAGTCCAAGACTCAAGTGGGCTTTCCTGGGTAAAGATTGCTCCCACATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658800.1 |
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| CDS CAA 90 bp | TTAGACAGCAGACTTCTTTCTGTATCCGGGCTGCATTCCAGACAGTaGTTAAGGCATTCTAAGTCACAGGATGAGATAGGAGGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LDSRLLSVSGLHSRQ*LRHSKSQDEIGGQH Trigger: GTGCTGACCTCCTATCTCATCCTGTGACTTAGAATGCCTTAACAACTGTCTGGAATGCAGCCCGGATACAGAAAGAAGTCTGCTGTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655546.1 |
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| CDS CAA 90 bp | AGGTGCTGCAGCCACTCCACAGATCATCACAGGGATCATGTGTTATaGTTCCATGCAATCATTGAGGGAACCATGGAGTCTCTGCTATTT | + |
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Preference number: 6 (lower is better) Translates to: RCCSHSTDHHRDHVL*FHAIIEGTMESLLF Trigger: AAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGTGATGATCTGTGGAGTGGCTGCAGCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656251.1 ENST00000659244.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CAA 90 bp | CTGGTCCATCTTGATGCACTTGGGATGCATAGATGTACAGAACGCTaGGGATGTATAGAAAGAACATCATCACTCAGTAGCGGGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LVHLDALGMHRCTER*GCIERTSSLSSGLH Trigger: ATGCAGCCCGCTACTGAGTGATGATGTTCTTTCTATACATCCCAAGCGTTCTGTACATCTATGCATCCCAAGTGCATCAAGATGGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658800.1 ENST00000665820.1 |
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| CDS GCA 72 bp | AACCATGGAGTCTCTGCTATTTTCAACCTGTGGCTCTaGAATCCGTTTTGGTATCAGGATCCTCTGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: NHGVSAIFNLWL*NPFWYQDPLLE Trigger: TTCCAGCAGAGGATCCTGATACCAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000655045.1 ENST00000656251.1 ENST00000659244.1 ENST00000660222.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CAA 72 bp | CTGAACATGCTGACAACCTGGTCCATCTTGATGCACTaGGGATGCATAGATGTACAGAACGCTTGGGATGTA | + |
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Preference number: 6 (lower is better) Translates to: LNMLTTWSILMH*GCIDVQNAWDV Trigger: TACATCCCAAGCGTTCTGTACATCTATGCATCCCAAGTGCATCAAGATGGACCAGGTTGTCAGCATGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658800.1 ENST00000665820.1 ENST00000671477.1 |
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| CDS CAA 90 bp | CCATGGAGTCTCTGCTATTTTCAACCTGTGGCTCTGCAATCCGTTTaGGTATCAGGATCCTCTGCTGGAATATCTGCATATAGCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: PWSLCYFQPVALQSV*VSGSSAGISAYSLT Trigger: TGTCAAGCTATATGCAGATATTCCAGCAGAGGATCCTGATACCAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655045.1 ENST00000659244.1 ENST00000662353.1 |
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| CDS CAA 90 bp | CCACAGATCATCACAGGGATCATGTGTTATTGTTCCATGCAATCATaGAGGGAACCATGGAGTCTCTGCTATTTTCAACCTGTGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PQIITGIMCYCSMQS*REPWSLCYFQPVAL Trigger: CAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGTGATGATCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656251.1 ENST00000659244.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CAA 90 bp | ATAGAAAGAACATCATCACTCAGTAGCGGGCTGCATTCCAGACAGTaGTTAAGGCATTCTAAGTCACAGGATGAGATAGGAGGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: IERTSSLSSGLHSRQ*LRHSKSQDEIGGQH Trigger: GTGCTGACCTCCTATCTCATCCTGTGACTTAGAATGCCTTAACAACTGTCTGGAATGCAGCCCGCTACTGAGTGATGATGTTCTTTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658800.1 ENST00000665820.1 |
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| CDS CAA 90 bp | CTGGTCCATCTTGATGCACTTGGGATGCATAGATGTACAGAACGCTaGGGATGTATAGAAAGAACATCATCACTCAGTAGCTGTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LVHLDALGMHRCTER*GCIERTSSLSSCAH Trigger: ATGGGCACAGCTACTGAGTGATGATGTTCTTTCTATACATCCCAAGCGTTCTGTACATCTATGCATCCCAAGTGCATCAAGATGGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671477.1 |
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| CDS GCA 72 bp | TGTTCCATGCAATCATTGAGGGAACCATGGAGTCTCTaGTATTTTCAACCTGTGGCTCTGCAATCCGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CSMQSLREPWSL*YFQPVALQSVL Trigger: CAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000655045.1 ENST00000656251.1 ENST00000659244.1 ENST00000660222.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CCA 72 bp | CATGGTGTTATATTCCTCATTTCCAGTGTGATGGTATaGCAGCATCCATTCAGTCTGTGCCCATTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: HGVIFLISSVMV*QHPFSLCPFFR Trigger: CCTGAAGAATGGGCACAGACTGAATGGATGCTGCCATACCATCACACTGGAAATGAGGAATATAACACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653878.1 ENST00000671240.1 |
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| CDS CCA 72 bp | CATGGTGTTATATTCCTCATTTCCAGTGTGATGGTATaGCAGCATCCATTCAGTCTGCCAAAGAGGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: HGVIFLISSVMV*QHPFSLPKRDC Trigger: ACAGTCCCTCTTTGGCAGACTGAATGGATGCTGCCATACCATCACACTGGAAATGAGGAATATAACACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653160.1 ENST00000656251.1 ENST00000659244.1 ENST00000667632.1 ENST00000668650.1 |
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| CDS CAA 72 bp | AGCCACTCCACAGATCATCACAGGGATCATGTGTTATaGTTCCATGCAATCATTGAGGGAACCATGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: SHSTDHHRDHVL*FHAIIEGTMES Trigger: AGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGTGATGATCTGTGGAGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656251.1 ENST00000659244.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CAA 72 bp | CTTCTTCAGAATCATGAAATATCCAGGAAAGCCCACTaGAGTCTTGGACTCCAACATGGTGCAGACCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLQNHEISRKAH*SLGLQHGADPK Trigger: TTTGGGGTCTGCACCATGTTGGAGTCCAAGACTCAAGTGGGCTTTCCTGGATATTTCATGATTCTGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665820.1 ENST00000671477.1 |
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| CDS TCA 72 bp | TTCTTCCTCATGGTGTTATATTCCTCATTTCCAGTGTaGTGGTATGGCAGCATCCATTCAGTCTGTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: FFLMVLYSSFPV*WYGSIHSVCAH Trigger: ATGGGCACAGACTGAATGGATGCTGCCATACCATCACACTGGAAATGAGGAATATAACACCATGAGGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653878.1 ENST00000671240.1 |
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| CDS CAA 72 bp | AGACTTCTTTCTGTATCCGGGCTGCATTCCAGACAGTaGTTAAGGCATTCTAAGTCACAGGATGAGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: RLLSVSGLHSRQ*LRHSKSQDEIG Trigger: TCCTATCTCATCCTGTGACTTAGAATGCCTTAACAACTGTCTGGAATGCAGCCCGGATACAGAAAGAAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655546.1 |
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| CDS CAA 72 bp | CTCTGCTATTTTCAACCTGTGGCTCTGCAATCCGTTTaGGTATCAGGATCCTCTGCTGGAATATCTGCATAT | + |
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Preference number: 6 (lower is better) Translates to: LCYFQPVALQSV*VSGSSAGISAY Trigger: ATATGCAGATATTCCAGCAGAGGATCCTGATACCAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000655045.1 ENST00000656251.1 ENST00000659244.1 ENST00000660222.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CAA 72 bp | ATGTTTACTCTGAACATGCTGACAACCTGGTCCATCTaGATGCACTTGGGATGCATAGATGTACAGAACGCT | + |
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Preference number: 6 (lower is better) Translates to: MFTLNMLTTWSI*MHLGCIDVQNA Trigger: AGCGTTCTGTACATCTATGCATCCCAAGTGCATCAAGATGGACCAGGTTGTCAGCATGTTCAGAGTAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658800.1 ENST00000665820.1 ENST00000671477.1 |
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| CDS CCA 72 bp | TTCTTCTTCAGAATCATGAAATATAGTTCTGGAAGCTaGAGAGTCCGCGATCAAGGTGCTGGCATATTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FFFRIMKYSSGS*RVRDQGAGIFS Trigger: ACTGAATATGCCAGCACCTTGATCGCGGACTCTCCAGCTTCCAGAACTATATTTCATGATTCTGAAGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655546.1 |
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| CDS CCA 72 bp | TCTGCTATTTTCAACCTGTGGCTCTGCAATCCGTTTTaGTATCAGGATCCTCTGCTGGAATATCTGCATATA | + |
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Preference number: 6 (lower is better) Translates to: SAIFNLWLCNPF*YQDPLLEYLHI Trigger: TATATGCAGATATTCCAGCAGAGGATCCTGATACCAAAACGGATTGCAGAGCCACAGGTTGAAAATAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000655045.1 ENST00000656251.1 ENST00000659244.1 ENST00000660222.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CCA 72 bp | ATGTGTTATTGTTCCATGCAATCATTGAGGGAACCATaGAGTCTCTGCTATTTTCAACCTGTGGCTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: MCYCSMQSLREP*SLCYFQPVALQ Trigger: TTGCAGAGCCACAGGTTGAAAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000655045.1 ENST00000656251.1 ENST00000659244.1 ENST00000660222.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CAA 72 bp | ATCACAGGGATCATGTGTTATTGTTCCATGCAATCATaGAGGGAACCATGGAGTCTCTGCTATTTTCAACCT | + |
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Preference number: 6 (lower is better) Translates to: ITGIMCYCSMQS*REPWSLCYFQP Trigger: AGGTTGAAAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000655045.1 ENST00000656251.1 ENST00000659244.1 ENST00000660222.1 ENST00000662353.1 ENST00000664823.1 ENST00000671240.1 |
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| CDS CAA 72 bp | ATAGGAGGTCAGCACAAAATACAGGTTATAAAGACTTaGCTGATAAAACAGGTTGCGGTAAAGAAGCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: IGGQHKIQVIKT*LIKQVAVKKPD Trigger: GTCTGGCTTCTTTACCGCAACCTGTTTTATCAGCAAAGTCTTTATAACCTGTATTTTGTGCTGACCTCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000428761.2 ENST00000653160.1 ENST00000653878.1 ENST00000655045.1 ENST00000655546.1 ENST00000656251.1 ENST00000658800.1 ENST00000659244.1 ENST00000660222.1 ENST00000661523.1 ENST00000662353.1 ENST00000663997.1 ENST00000664823.1 ENST00000665820.1 ENST00000666881.1 ENST00000667632.1 ENST00000671240.1 ENST00000671477.1 |
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| CDS TCA 72 bp | CACTGGAAGCAGAACTATGTGCATAAACTATGCAACTaGCTAGCTATAAGTGTAATTGTGCCATTAGTATCC | + |
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Preference number: 6 (lower is better) Translates to: HWKQNYVHKLCN*LAISVIVPLVS Trigger: GGATACTAATGGCACAATTACACTTATAGCTAGTCAGTTGCATAGTTTATGCACATAGTTCTGCTTCCAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 19 transcripts: ENST00000428761.2 ENST00000653160.1 ENST00000653878.1 ENST00000655045.1 ENST00000655546.1 ENST00000656251.1 ENST00000658800.1 ENST00000659244.1 ENST00000660222.1 ENST00000661523.1 ENST00000662353.1 ENST00000663997.1 ENST00000664823.1 ENST00000665820.1 ENST00000666881.1 ENST00000667632.1 ENST00000668650.1 ENST00000671240.1 ENST00000671477.1 |
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| CDS CCA 72 bp | ACAGAAGGTAGAGAGAATAATAACCAGTCAACAAGGTaGTGGATGGTTAAGAAAGCTTCTAGTCTTCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: TEGRENNNQSTR*WMVKKASSLQE Trigger: TTCTTGAAGACTAGAAGCTTTCTTAACCATCCACCACCTTGTTGACTGGTTATTATTCTCTCTACCTTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 19 transcripts: ENST00000428761.2 ENST00000653160.1 ENST00000653878.1 ENST00000655045.1 ENST00000655546.1 ENST00000656251.1 ENST00000658800.1 ENST00000659244.1 ENST00000660222.1 ENST00000661523.1 ENST00000662353.1 ENST00000663997.1 ENST00000664823.1 ENST00000665820.1 ENST00000666881.1 ENST00000667632.1 ENST00000668650.1 ENST00000671240.1 ENST00000671477.1 |
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| CDS CAA 72 bp | AGAATCATGAAATATCATCACAGGGATCATGTGTTATaGTTCCATGCAATCATTGAGGGAACCATGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: RIMKYHHRDHVL*FHAIIEGTMES Trigger: AGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGTGATGATATTTCATGATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655045.1 ENST00000660222.1 |
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| CDS CAA 90 bp | TTCTTCTTCAGAATCATGAAATATCATCACAGGGATCATGTGTTATaGTTCCATGCAATCATTGAGGGAACCATGGAGTCTCTGCTATTT | + |
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Preference number: 6 (lower is better) Translates to: FFFRIMKYHHRDHVL*FHAIIEGTMESLLF Trigger: AAATAGCAGAGACTCCATGGTTCCCTCAATGATTGCATGGAACAATAACACATGATCCCTGTGATGATATTTCATGATTCTGAAGAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655045.1 ENST00000660222.1 |
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| CDS CCA 72 bp | GAAGGTAGAGAGAATAATAACCAGTCAACAAGGTGGTaGATGGTTAAGAAAGCTTCTAGTCTTCAAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: EGRENNNQSTRW*MVKKASSLQEN Trigger: ATTTTCTTGAAGACTAGAAGCTTTCTTAACCATCCACCACCTTGTTGACTGGTTATTATTCTCTCTACCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000428761.2 ENST00000653160.1 ENST00000653878.1 ENST00000655045.1 ENST00000655546.1 ENST00000656251.1 ENST00000658800.1 ENST00000659244.1 ENST00000660222.1 ENST00000661523.1 ENST00000662353.1 ENST00000663997.1 ENST00000664823.1 ENST00000665820.1 ENST00000666881.1 ENST00000667632.1 ENST00000668650.1 ENST00000671240.1 ENST00000671477.1 |
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