Pregenerated sensors for LINC00347 (Homo sapiens)
Ensembl gene IDs: ENSG00000236678Ensembl transcript IDs: ENST00000451336.2, ENST00000594461.2, ENST00000595711.5, ENST00000596240.5, ENST00000597518.1, ENST00000600832.1, ENST00000601480.1, ENST00000664176.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTTTGCTGCAGCTGCTCTTTGACATCCTGCACAGGGTGATGGGCTaGCGGCCCTGGGTGTGCCTCTGGGCCTGTCATCTGTCGTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: PLLQLLFDILHRVMG*RPWVCLWACHLSCC Trigger: ACAACACGACAGATGACAGGCCCAGAGGCACACCCAGGGCCGCCAGCCCATCACCCTGTGCAGGATGTCAAAGAGCAGCTGCAGCAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000600832.1 |
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| CDS TCA 90 bp | ATCTTCTTCCTTTGCTGCAGCTGCTCTTTGACATCCTGCACAGGGTaGTGGGCTGGCGGCCCTGGGTGTGCCTCTGGGCCTGTCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: IFFLCCSCSLTSCTG*WAGGPGCASGPVIC Trigger: ACAGATGACAGGCCCAGAGGCACACCCAGGGCCGCCAGCCCATCACCCTGTGCAGGATGTCAAAGAGCAGCTGCAGCAAAGGAAGAAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000600832.1 |
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| CDS GCA 90 bp | ACAGGCGGACCTGAGCTGCCCTGTGACCTCAATGCTTTCTTCCTGTaGCTTGGCATATCTGATGAACATCAGCAAGGGCCCCCTTACTCA | + |
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Preference number: 5 (lower is better) Translates to: TGGPELPCDLNAFFL*LGISDEHQQGPPYS Trigger: TGAGTAAGGGGGCCCTTGCTGATGTTCATCAGATATGCCAAGGCACAGGAAGAAAGCATTGAGGTCACAGGGCAGCTCAGGTCCGCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594461.2 |
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| CDS GCA 90 bp | CCCAATCTCGTCACCTGTTTTCAATTACCACAGGCGGACCTGAGCTaGCCTGTGACCTCAATGCTTTCTTCCTGTGCCTTGGCATATCTG | + |
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Preference number: 5 (lower is better) Translates to: PNLVTCFQLPQADLS*PVTSMLSSCALAYL Trigger: CAGATATGCCAAGGCACAGGAAGAAAGCATTGAGGTCACAGGGCAGCTCAGGTCCGCCTGTGGTAATTGAAAACAGGTGACGAGATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594461.2 |
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| CDS GCA 90 bp | CCCAATCTCGTCACCTGTTTTCAATTACCACAGGCGGACCTGAGCTaGCCTGTGACCTCAATGCTTTCTTCCTGTGCCTTGGTTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PNLVTCFQLPQADLS*PVTSMLSSCALVSF Trigger: GAAAGAAACCAAGGCACAGGAAGAAAGCATTGAGGTCACAGGGCAGCTCAGGTCCGCCTGTGGTAATTGAAAACAGGTGACGAGATTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600832.1 |
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| CDS TCA 90 bp | ATATCTGATGAACATCAGCAAGGGCCCCCTTACTCACTACAGCTATaGAAGGCCCCTCCTCTGAGGCAAACCACAGAGAGACACATAGCT | + |
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Preference number: 5 (lower is better) Translates to: ISDEHQQGPPYSLQL*KAPPLRQTTERHIA Trigger: AGCTATGTGTCTCTCTGTGGTTTGCCTCAGAGGAGGGGCCTTTCATAGCTGTAGTGAGTAAGGGGGCCCTTGCTGATGTTCATCAGATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594461.2 |
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| CDS TCA 90 bp | TCAAGCAGCCACACAGCCCTTTATCCCCTTCCAGATCCAACTGGTTaGATCAGTCTTGGAGCAGAAAACAGAACCTTCCCATTGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSSHTALYPLPDPTG*ISLGAENRTFPLSS Trigger: GGAAGACAATGGGAAGGTTCTGTTTTCTGCTCCAAGACTGATTCAACCAGTTGGATCTGGAAGGGGATAAAGGGCTGTGTGGCTGCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000596240.5 ENST00000601480.1 |
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| CDS GCA 90 bp | GGGCCTGTCATCTGTCGTGTTGTTAGACTGCTGATGAGCTGTCGCTaGTTGTCTTTAAAGTCTGCACTTCTCTCTTTTCCAATTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: GPVICRVVRLLMSCR*LSLKSALLSFPILA Trigger: AGCCAAAATTGGAAAAGAGAGAAGTGCAGACTTTAAAGACAAGCAGCGACAGCTCATCAGCAGTCTAACAACACGACAGATGACAGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000600832.1 ENST00000601480.1 |
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| CDS GCA 90 bp | AGTCCTCATGCTCTATATTATGTGAAAAGCACAGAAAGCCTCTCCTaGAGTATAACAATCTGTCTTTCATCACACTCATTTGTGTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: SPHALYYVKSTESLS*SITICLSSHSFVFH Trigger: GTGAAACACAAATGAGTGTGATGAAAGACAGATTGTTATACTGCAGGAGAGGCTTTCTGTGCTTTTCACATAATATAGAGCATGAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594461.2 ENST00000664176.1 |
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| CDS TCA 90 bp | TATAACAATCTGTCTTTCATCACACTCATTTGTGTTTCACATGACTaGGTTTGCTGTTTAGGGAATCATCGGAGTACAATTCCAAATGGA | + |
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Preference number: 5 (lower is better) Translates to: YNNLSFITLICVSHD*VCCLGNHRSTIPNG Trigger: TCCATTTGGAATTGTACTCCGATGATTCCCTAAACAGCAAACTCAGTCATGTGAAACACAAATGAGTGTGATGAAAGACAGATTGTTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000594461.2 ENST00000600832.1 ENST00000664176.1 |
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| CDS GCA 90 bp | CATTTACACATGAGCAAATTCAGGTCTGGTAGTTTTTGTTACATATaGTTAAACCTTCTTGGGAACAGTCCTCATGCTCTATATTATGTG | + |
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Preference number: 5 (lower is better) Translates to: HLHMSKFRSGSFCYI*LNLLGNSPHALYYV Trigger: CACATAATATAGAGCATGAGGACTGTTCCCAAGAAGGTTTAAGCATATGTAACAAAAACTACCAGACCTGAATTTGCTCATGTGTAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000594461.2 ENST00000664176.1 |
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| CDS TCA 72 bp | CTTTGCTGCAGCTGCTCTTTGACATCCTGCACAGGGTaGTGGGCTGGCGGCCCTGGGTGTGCCTCTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LCCSCSLTSCTG*WAGGPGCASGP Trigger: AGGCCCAGAGGCACACCCAGGGCCGCCAGCCCATCACCCTGTGCAGGATGTCAAAGAGCAGCTGCAGCAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000600832.1 |
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| CDS CCA 72 bp | CAGCTGCTCTTTGACATCCTGCACAGGGTGATGGGCTaGCGGCCCTGGGTGTGCCTCTGGGCCTGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: QLLFDILHRVMG*RPWVCLWACHL Trigger: CAGATGACAGGCCCAGAGGCACACCCAGGGCCGCCAGCCCATCACCCTGTGCAGGATGTCAAAGAGCAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000600832.1 ENST00000601480.1 |
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| CDS TCA 72 bp | TTGTATATGCGGCACCATCTGCCTCTTTGCCGAGGCTaGGCCTTCGGCTTTCCCAGGGGAAATAGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LYMRHHLPLCRG*AFGFPRGNSCG Trigger: TCCACAGCTATTTCCCCTGGGAAAGCCGAAGGCTCAGCCTCGGCAAAGAGGCAGATGGTGCCGCATATACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596240.5 |
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| CDS CAA 90 bp | GCGGACCTGAGCTGCCCTGTGACCTCAATGCTTTCTTCCTGTGCCTaGGCATATCTGATGAACATCAGCAAGGGCCCCCTTACTCACTAC | + |
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Preference number: 6 (lower is better) Translates to: ADLSCPVTSMLSSCA*AYLMNISKGPLTHY Trigger: GTAGTGAGTAAGGGGGCCCTTGCTGATGTTCATCAGATATGCCAAGGCACAGGAAGAAAGCATTGAGGTCACAGGGCAGCTCAGGTCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594461.2 |
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| CDS GCA 72 bp | CCTGAGCTGCCCTGTGACCTCAATGCTTTCTTCCTGTaGCTTGGCATATCTGATGAACATCAGCAAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PELPCDLNAFFL*LGISDEHQQGP Trigger: GGGCCCTTGCTGATGTTCATCAGATATGCCAAGGCACAGGAAGAAAGCATTGAGGTCACAGGGCAGCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594461.2 |
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| CDS CAA 72 bp | ACAGGTTTCATTGTATATGCGGCACCATCTGCCTCTTaGCCGAGGCTGAGCCTTCGGCTTTCCCAGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: TGFIVYAAPSAS*PRLSLRLSQGK Trigger: TTTCCCCTGGGAAAGCCGAAGGCTCAGCCTCGGCAAAGAGGCAGATGGTGCCGCATATACAATGAAACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596240.5 |
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| CDS GCA 72 bp | GTCACCTGTTTTCAATTACCACAGGCGGACCTGAGCTaGCCTGTGACCTCAATGCTTTCTTCCTGTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VTCFQLPQADLS*PVTSMLSSCAL Trigger: CAAGGCACAGGAAGAAAGCATTGAGGTCACAGGGCAGCTCAGGTCCGCCTGTGGTAATTGAAAACAGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000594461.2 ENST00000600832.1 ENST00000664176.1 |
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| CDS CAA 90 bp | GTGCCTGTCCCATGGCAAATTACTTGGAGAATTGGGTTGATGATGTaGCGATTATCCTCCCGTACATTCCTTCATGTCTCCGGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VPVPWQITWRIGLMM*RLSSRTFLHVSGRL Trigger: CAGCCTGCCGGAGACATGAAGGAATGTACGGGAGGATAATCGCAACATCATCAACCCAATTCTCCAAGTAATTTGCCATGGGACAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000601480.1 |
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| CDS CAA 72 bp | CCACACAGCCCTTTATCCCCTTCCAGATCCAACTGGTaGAATCAGTCTTGGAGCAGAAAACAGAACCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PHSPLSPSRSNW*NQSWSRKQNLP Trigger: GGGAAGGTTCTGTTTTCTGCTCCAAGACTGATTCAACCAGTTGGATCTGGAAGGGGATAAAGGGCTGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000596240.5 ENST00000601480.1 |
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| CDS CAA 90 bp | AACAGCATTATTGGCCAGCTACCTTGGAGAATTGGGTTGATGATGTaGCGATTATCCTCCCGTACATTCCTTCATGTCTCCGGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: NSIIGQLPWRIGLMM*RLSSRTFLHVSGRL Trigger: CAGCCTGCCGGAGACATGAAGGAATGTACGGGAGGATAATCGCAACATCATCAACCCAATTCTCCAAGGTAGCTGGCCAATAATGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596240.5 |
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| CDS TCA 72 bp | CACACAGCCCTTTATCCCCTTCCAGATCCAACTGGTTaGATCAGTCTTGGAGCAGAAAACAGAACCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: HTALYPLPDPTG*ISLGAENRTFP Trigger: TGGGAAGGTTCTGTTTTCTGCTCCAAGACTGATTCAACCAGTTGGATCTGGAAGGGGATAAAGGGCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000596240.5 ENST00000601480.1 |
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| CDS CCA 72 bp | CAGCCACACAGCCCTTTATCCCCTTCCAGATCCAACTaGTTGAATCAGTCTTGGAGCAGAAAACAGAACCTT | + |
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Preference number: 6 (lower is better) Translates to: QPHSPLSPSRSN*LNQSWSRKQNL Trigger: AAGGTTCTGTTTTCTGCTCCAAGACTGATTCAACCAGTTGGATCTGGAAGGGGATAAAGGGCTGTGTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000596240.5 ENST00000601480.1 |
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| CDS CCA 72 bp | AGATCCAATGTGAAGATGGTTTCCACTGGCCCAAGATaGAATCCTCCAGTAGCAAGCAGCCACACTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RSNVKMVSTGPR*NPPVASSHTQN Trigger: ATTCTGAGTGTGGCTGCTTGCTACTGGAGGATTCCATCTTGGGCCAGTGGAAACCATCTTCACATTGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597518.1 |
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| CDS CAA 72 bp | AGGCCCAAACATTTAAGTCTGGATGATCTTCTTCCTTaGCTGCAGCTGCTCTTTGACATCCTGCACAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RPKHLSLDDLLP*LQLLFDILHRV Trigger: CACCCTGTGCAGGATGTCAAAGAGCAGCTGCAGCAAAGGAAGAAGATCATCCAGACTTAAATGTTTGGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000600832.1 |
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| CDS CAA 90 bp | ATCAAGCAGCCACACAGCCCTTTATCCCCTTCCAGATCCAACTGGTaGAATCAGTCTTGGAGCAGAAAACAGAACCTTCCCATTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IKQPHSPLSPSRSNW*NQSWSRKQNLPIVF Trigger: GAAGACAATGGGAAGGTTCTGTTTTCTGCTCCAAGACTGATTCAACCAGTTGGATCTGGAAGGGGATAAAGGGCTGTGTGGCTGCTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000596240.5 ENST00000601480.1 |
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| CDS CAA 90 bp | ACACAGCCCTTTATCCCCTTCCAGATCCAACTGGTTGAATCAGTCTaGGAGCAGAAAACAGAACCTTCCCATTGTCTTCCCAAACACATG | + |
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Preference number: 6 (lower is better) Translates to: TQPFIPFQIQLVESV*EQKTEPSHCLPKHM Trigger: CATGTGTTTGGGAAGACAATGGGAAGGTTCTGTTTTCTGCTCCAAGACTGATTCAACCAGTTGGATCTGGAAGGGGATAAAGGGCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000596240.5 ENST00000601480.1 |
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| CDS CAA 90 bp | CCTGTCATCTGTCGTGTTGTTAGACTGCTGATGAGCTGTCGCTGCTaGTCTTTAAAGTCTGCACTTCTCTCTTTTCCAATTTTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PVICRVVRLLMSCRC*SLKSALLSFPILAA Trigger: GGCAGCCAAAATTGGAAAAGAGAGAAGTGCAGACTTTAAAGACAAGCAGCGACAGCTCATCAGCAGTCTAACAACACGACAGATGACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000600832.1 ENST00000601480.1 |
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| CDS CCA 72 bp | GAATCTCTGAGTGATAGAATTGTCCTTCCGTATCCATaGGGGCTTGGTTCCAGGACCCGCATAGATATCAAA | + |
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Preference number: 6 (lower is better) Translates to: ESLSDRIVLPYP*GLGSRTRIDIK Trigger: TTTGATATCTATGCGGGTCCTGGAACCAAGCCCCCATGGATACGGAAGGACAATTCTATCACTCAGAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594461.2 ENST00000595711.5 |
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| CDS CAA 72 bp | ATTGGCCAGCTACCTTGGAGAATTGGGTTGATGATGTaGCGATTATCCTCCCGTACATTCCTTCATGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IGQLPWRIGLMM*RLSSRTFLHVS Trigger: GGAGACATGAAGGAATGTACGGGAGGATAATCGCAACATCATCAACCCAATTCTCCAAGGTAGCTGGCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596240.5 |
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| CDS TCA 72 bp | ATGGCATTGAGCTCAAAGTCCAGAATTCAGAATCTCTaGGTGATAGAATTGTCCTTCCGTATCCATGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: MALSSKSRIQNL*VIELSFRIHGG Trigger: GCCCCCATGGATACGGAAGGACAATTCTATCACTCAGAGATTCTGAATTCTGGACTTTGAGCTCAATGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000594461.2 ENST00000595711.5 |
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| CDS CAA 72 bp | GTGCCTGTCCCATGGCAAATTACTTGGAGAATTGGGTaGATGATGTTGCGATTATCCTCCCGTACATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VPVPWQITWRIG*MMLRLSSRTFL Trigger: AAGGAATGTACGGGAGGATAATCGCAACATCATCAACCCAATTCTCCAAGTAATTTGCCATGGGACAGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000601480.1 |
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| CDS GCA 72 bp | ATCTGTCGTGTTGTTAGACTGCTGATGAGCTGTCGCTaGTTGTCTTTAAAGTCTGCACTTCTCTCTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ICRVVRLLMSCR*LSLKSALLSFP Trigger: TGGAAAAGAGAGAAGTGCAGACTTTAAAGACAAGCAGCGACAGCTCATCAGCAGTCTAACAACACGACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000600832.1 ENST00000601480.1 |
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| CDS CAA 72 bp | CCATGGCAAATTACTTGGAGAATTGGGTTGATGATGTaGCGATTATCCTCCCGTACATTCCTTCATGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PWQITWRIGLMM*RLSSRTFLHVS Trigger: GGAGACATGAAGGAATGTACGGGAGGATAATCGCAACATCATCAACCCAATTCTCCAAGTAATTTGCCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000601480.1 |
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| CDS CAA 72 bp | AACAGCATTATTGGCCAGCTACCTTGGAGAATTGGGTaGATGATGTTGCGATTATCCTCCCGTACATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: NSIIGQLPWRIG*MMLRLSSRTFL Trigger: AAGGAATGTACGGGAGGATAATCGCAACATCATCAACCCAATTCTCCAAGGTAGCTGGCCAATAATGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596240.5 |
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| CDS CAA 90 bp | CCATTCCACCTTGGTTTCTTTCCACTCTTTTCTAGGAAGGGGTCTTaGTATGGAGGACTGTTTCCAAAGCACAAAGACTCTATGGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: PFHLGFFPLFSRKGS*YGGLFPKHKDSMVL Trigger: TAAGACCATAGAGTCTTTGTGCTTTGGAAACAGTCCTCCATACAAAGACCCCTTCCTAGAAAAGAGTGGAAAGAAACCAAGGTGGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451336.2 ENST00000594461.2 |
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| CDS CAA 90 bp | GCCCAGGAAGCATTGCACAAGAATATTAGCATGGTCTCCTTTCTGTaGTATCCATTCCACCTTGGTTTCTTTCCACTCTTTTCTAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AQEALHKNISMVSFL*YPFHLGFFPLFSRK Trigger: CTTCCTAGAAAAGAGTGGAAAGAAACCAAGGTGGAATGGATACAACAGAAAGGAGACCATGCTAATATTCTTGTGCAATGCTTCCTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451336.2 ENST00000594461.2 |
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| CDS CAA 90 bp | TTCCTGTGCCTTGGTTTCTTTCCACTCTTTTCTAGGAAGGGGTCTTaGTATGGAGGACTGTTTCCAAAGCACAAAGACTCTATGGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: FLCLGFFPLFSRKGS*YGGLFPKHKDSMVL Trigger: TAAGACCATAGAGTCTTTGTGCTTTGGAAACAGTCCTCCATACAAAGACCCCTTCCTAGAAAAGAGTGGAAAGAAACCAAGGCACAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600832.1 |
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| CDS CCA 72 bp | TTTCTGCCCAGGAAGCATTGCACAAGAATATTAGCATaGTCTCCTTTCTGTTGTATCCATTCCACCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: FLPRKHCTRILA*SPFCCIHSTLV Trigger: AACCAAGGTGGAATGGATACAACAGAAAGGAGACCATGCTAATATTCTTGTGCAATGCTTCCTGGGCAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451336.2 ENST00000594461.2 |
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| CDS CCA 72 bp | GAGGCAAACCACAGAGAGACACATAGCTTTGCAGAATaGAACATCCTTTATGACATAATTTCTGCCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: EANHRETHSFAE*NILYDIISAQE Trigger: TTCCTGGGCAGAAATTATGTCATAAAGGATGTTCCATTCTGCAAAGCTATGTGTCTCTCTGTGGTTTGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594461.2 |
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| CDS CCA 72 bp | TTAGAACAGCATTATTGGCCAGCTACCTTGGAGAATTaGGTTGATGATGTTGCGATTATCCTCCCGTACATT | + |
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Preference number: 6 (lower is better) Translates to: LEQHYWPATLEN*VDDVAIILPYI Trigger: AATGTACGGGAGGATAATCGCAACATCATCAACCCAATTCTCCAAGGTAGCTGGCCAATAATGCTGTTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596240.5 |
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| CDS CAA 72 bp | TGTCGTGTTGTTAGACTGCTGATGAGCTGTCGCTGCTaGTCTTTAAAGTCTGCACTTCTCTCTTTTCCAATT | + |
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Preference number: 6 (lower is better) Translates to: CRVVRLLMSCRC*SLKSALLSFPI Trigger: AATTGGAAAAGAGAGAAGTGCAGACTTTAAAGACAAGCAGCGACAGCTCATCAGCAGTCTAACAACACGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000595711.5 ENST00000600832.1 ENST00000601480.1 |
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| CDS CAA 72 bp | CTTGGTTTCTTTCCACTCTTTTCTAGGAAGGGGTCTTaGTATGGAGGACTGTTTCCAAAGCACAAAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: LGFFPLFSRKGS*YGGLFPKHKDS Trigger: AGAGTCTTTGTGCTTTGGAAACAGTCCTCCATACAAAGACCCCTTCCTAGAAAAGAGTGGAAAGAAACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000451336.2 ENST00000594461.2 ENST00000600832.1 |
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| CDS CAA 72 bp | TTAGCATGGTCTCCTTTCTGTTGTATCCATTCCACCTaGGTTTCTTTCCACTCTTTTCTAGGAAGGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LAWSPFCCIHST*VSFHSFLGRGL Trigger: AAGACCCCTTCCTAGAAAAGAGTGGAAAGAAACCAAGGTGGAATGGATACAACAGAAAGGAGACCATGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451336.2 ENST00000594461.2 |
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| CDS CAA 72 bp | GTATTGAAAACCAATAACAATGAGCACTCCAGATCCTaGATCGTCTCTCAATACCACTTGCACGTCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: VLKTNNNEHSRS*IVSQYHLHVSR Trigger: CCTACTGACGTGCAAGTGGTATTGAGAGACGATCAAGGATCTGGAGTGCTCATTGTTATTGGTTTTCAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597518.1 |
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| CDS CAA 90 bp | ACAAGAATATTAGCATGGTCTCCTTTCTGTTGTATCCATTCCACCTaGGTTTCTTTCCACTCTTTTCTAGGAAGGGGTCTTTGTATGGAG | + |
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Preference number: 6 (lower is better) Translates to: TRILAWSPFCCIHST*VSFHSFLGRGLCME Trigger: CTCCATACAAAGACCCCTTCCTAGAAAAGAGTGGAAAGAAACCAAGGTGGAATGGATACAACAGAAAGGAGACCATGCTAATATTCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451336.2 ENST00000594461.2 |
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| CDS CAA 90 bp | GCAGAATGGAACATCCTTTATGACATAATTTCTGCCCAGGAAGCATaGCACAAGAATATTAGCATGGTCTCCTTTCTGTTGTATCCATTC | + |
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Preference number: 6 (lower is better) Translates to: AEWNILYDIISAQEA*HKNISMVSFLLYPF Trigger: GAATGGATACAACAGAAAGGAGACCATGCTAATATTCTTGTGCAATGCTTCCTGGGCAGAAATTATGTCATAAAGGATGTTCCATTCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451336.2 ENST00000594461.2 |
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| CDS TCA 72 bp | CAATCTGTCTTTCATCACACTCATTTGTGTTTCACATaGCTGAGTTTGCTGTTTAGGGAATCATCGGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: QSVFHHTHLCFT*LSLLFRESSEY Trigger: GTACTCCGATGATTCCCTAAACAGCAAACTCAGTCATGTGAAACACAAATGAGTGTGATGAAAGACAGATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000594461.2 ENST00000600832.1 ENST00000664176.1 |
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| CDS CAA 72 bp | GCATTGCACAAGAATATTAGCATGGTCTCCTTTCTGTaGTATCCATTCCACCTTGGTTTCTTTCCACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ALHKNISMVSFL*YPFHLGFFPLF Trigger: AAAGAGTGGAAAGAAACCAAGGTGGAATGGATACAACAGAAAGGAGACCATGCTAATATTCTTGTGCAATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451336.2 ENST00000594461.2 |
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| CDS GCA 72 bp | ATGAGCAAATTCAGGTCTGGTAGTTTTTGTTACATATaGTTAAACCTTCTTGGGAACAGTCCTCATGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: MSKFRSGSFCYI*LNLLGNSPHAL Trigger: TAGAGCATGAGGACTGTTCCCAAGAAGGTTTAAGCATATGTAACAAAAACTACCAGACCTGAATTTGCTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000594461.2 ENST00000664176.1 |
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| CDS CAA 72 bp | AACATCCTTTATGACATAATTTCTGCCCAGGAAGCATaGCACAAGAATATTAGCATGGTCTCCTTTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: NILYDIISAQEA*HKNISMVSFLL Trigger: CAACAGAAAGGAGACCATGCTAATATTCTTGTGCAATGCTTCCTGGGCAGAAATTATGTCATAAAGGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451336.2 ENST00000594461.2 |
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| CDS CAA 72 bp | CATGCCATCAACCAAAAACTTCCTAAATGGGAGCTTTaGGGAATGTTCATTGTTATCTCTAAGATCCTATGG | + |
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Preference number: 6 (lower is better) Translates to: HAINQKLPKWEL*GMFIVISKILW Trigger: CCATAGGATCTTAGAGATAACAATGAACATTCCCAAAAGCTCCCATTTAGGAAGTTTTTGGTTGATGGCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601480.1 |
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| CDS CAA 90 bp | TTCAAGGGTCATGCCATCAACCAAAAACTTCCTAAATGGGAGCTTTaGGGAATGTTCATTGTTATCTCTAAGATCCTATGGTTTGTAACT | + |
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Preference number: 6 (lower is better) Translates to: FKGHAINQKLPKWEL*GMFIVISKILWFVT Trigger: AGTTACAAACCATAGGATCTTAGAGATAACAATGAACATTCCCAAAAGCTCCCATTTAGGAAGTTTTTGGTTGATGGCATGACCCTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601480.1 |
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| CDS CCA 72 bp | ATGCCATCAACCAAAAACTTCCTAAATGGGAGCTTTTaGGAATGTTCATTGTTATCTCTAAGATCCTATGGT | + |
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Preference number: 6 (lower is better) Translates to: MPSTKNFLNGSF*ECSLLSLRSYG Trigger: ACCATAGGATCTTAGAGATAACAATGAACATTCCCAAAAGCTCCCATTTAGGAAGTTTTTGGTTGATGGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601480.1 |
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| CDS CCA 72 bp | TTTCACAATTATGTATATACACATCCAACTATGCTCTaGTATGCCAAATATTTTCAGGGTGCATATCCACAC | + |
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Preference number: 6 (lower is better) Translates to: FHNYVYTHPTML*YAKYFQGAYPH Trigger: GTGTGGATATGCACCCTGAAAATATTTGGCATACCAGAGCATAGTTGGATGTGTATATACATAATTGTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601480.1 |
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