Pregenerated sensors for LINC00343 (Homo sapiens)
Ensembl gene IDs: ENSG00000226620Ensembl transcript IDs: ENST00000414368.2, ENST00000415294.3, ENST00000454555.2, ENST00000596398.6, ENST00000598229.2, ENST00000598478.2, ENST00000599179.2, ENST00000599264.2, ENST00000601607.6, ENST00000608220.6, ENST00000608426.2, ENST00000608624.6, ENST00000653082.1, ENST00000653178.1, ENST00000653504.1, ENST00000653600.1, ENST00000654086.1, ENST00000654132.1, ENST00000654352.1, ENST00000654904.1, ENST00000654919.1, ENST00000655062.1, ENST00000655173.1, ENST00000655201.1, ENST00000655206.1, ENST00000655448.1, ENST00000655625.1, ENST00000655741.1, ENST00000656267.1, ENST00000656290.1, ENST00000656479.1, ENST00000656539.1, ENST00000656615.1, ENST00000656646.1, ENST00000656920.1, ENST00000657324.1, ENST00000657599.1, ENST00000657690.1, ENST00000658024.1, ENST00000658095.1, ENST00000658151.1, ENST00000658169.1, ENST00000658308.1, ENST00000658692.1, ENST00000658711.1, ENST00000659016.1, ENST00000659165.1, ENST00000659258.1, ENST00000659496.1, ENST00000659909.1, ENST00000660236.1, ENST00000660294.1, ENST00000660560.1, ENST00000660821.1, ENST00000660976.1, ENST00000661079.1, ENST00000661301.1, ENST00000661782.1, ENST00000661817.1, ENST00000661872.1, ENST00000661976.1, ENST00000662500.1, ENST00000662776.1, ENST00000663045.1, ENST00000663194.1, ENST00000663287.1, ENST00000663594.1, ENST00000663744.1, ENST00000663761.1, ENST00000663969.1, ENST00000664090.1, ENST00000664140.1, ENST00000664201.1, ENST00000664522.1, ENST00000664695.1, ENST00000664796.1, ENST00000665309.1, ENST00000665747.1, ENST00000666040.1, ENST00000666322.1, ENST00000666696.1, ENST00000666723.1, ENST00000666948.1, ENST00000667106.1, ENST00000667217.1, ENST00000667429.1, ENST00000667492.1, ENST00000667534.1, ENST00000667582.1, ENST00000667685.1, ENST00000667987.1, ENST00000668080.1, ENST00000668272.1, ENST00000668279.1, ENST00000668362.1, ENST00000668396.1, ENST00000668581.1, ENST00000668939.1, ENST00000668966.1, ENST00000669035.1, ENST00000669144.1, ENST00000669264.1, ENST00000669497.1, ENST00000669507.1, ENST00000669540.1, ENST00000669655.1, ENST00000669675.1, ENST00000669706.1, ENST00000669807.1, ENST00000669840.1, ENST00000669886.1, ENST00000669887.1, ENST00000669959.1, ENST00000670114.1, ENST00000670303.1, ENST00000670308.1, ENST00000670429.1, ENST00000670430.1, ENST00000670433.1, ENST00000670530.1, ENST00000670546.1, ENST00000670555.1, ENST00000670771.1, ENST00000670821.1, ENST00000670977.1, ENST00000671026.1, ENST00000671053.1, ENST00000671060.1, ENST00000671402.1, ENST00000671516.1, ENST00000671561.1
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTAACTGAGCCCTGCCTCCTGGACAGCCAGGGTCCCTCTTTGCTCTaGTCACTTATCACGTTGGTCTTCCTATCCTGGAGTGTGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: VTEPCLLDSQGPSLL*SLITLVFLSWSVAH Trigger: GTGAGCCACACTCCAGGATAGGAAGACCAACGTGATAAGTGAGCAGAGCAAAGAGGGACCCTGGCTGTCCAGGAGGCAGGGCTCAGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS CCA 90 bp | GAGCCTCAGCTGATGCTGTTTGTTGATGAGATACTGGCCTTGGCGTaGGGATGTTCCCAGCATGGCTGCTCACGTCATCAGGCCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: EPQLMLFVDEILALA*GCSQHGCSRHQASK Trigger: CTTGCTGGCCTGATGACGTGAGCAGCCATGCTGGGAACATCCCCACGCCAAGGCCAGTATCTCATCAACAAACAGCATCAGCTGAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS GCA 90 bp | CTTCCTTCTGCCTGCCCAGAAGTGTACCAGGCTCACTCGTGCCTTTaGTCACTCGGATGCCTCCCTAGATCACGTTTTCACCTCCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LPSACPEVYQAHSCL*SLGCLPRSRFHLPC Trigger: ACAAGGGAGGTGAAAACGTGATCTAGGGAGGCATCCGAGTGAGCAAAGGCACGAGTGAGCCTGGTACACTTCTGGGCAGGCAGAAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000454555.2 ENST00000653178.1 ENST00000653504.1 ENST00000656920.1 ENST00000659258.1 ENST00000667492.1 ENST00000669807.1 ENST00000671060.1 |
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| CDS GCA 90 bp | AACTGCCTTCCTTCTGCCTGCCCAGAAGTGTACCAGGCTCACTCGTaGCTTTGCTCACTCGGATGCCTCCCTAGATCACGTTTTCACCTC | + |
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Preference number: 5 (lower is better) Translates to: NCLPSACPEVYQAHS*LCSLGCLPRSRFHL Trigger: GAGGTGAAAACGTGATCTAGGGAGGCATCCGAGTGAGCAAAGGCACGAGTGAGCCTGGTACACTTCTGGGCAGGCAGAAGGAAGGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000454555.2 ENST00000653178.1 ENST00000653504.1 ENST00000656920.1 ENST00000659258.1 ENST00000667492.1 ENST00000669807.1 ENST00000671060.1 |
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| CDS GCA 90 bp | TGCCCAGAAGTGTACCAGGCTCACTCGTGCCTTTGCTCACTCGGATaGCTCCCTAGATCACGTTTTCACCTCCCTTGTTCATCTGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: CPEVYQAHSCLCSLG*LPRSRFHLPCSSGS Trigger: AGAGCCAGATGAACAAGGGAGGTGAAAACGTGATCTAGGGAGGCATCCGAGTGAGCAAAGGCACGAGTGAGCCTGGTACACTTCTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000454555.2 ENST00000653178.1 ENST00000653504.1 ENST00000659258.1 ENST00000667492.1 ENST00000669807.1 ENST00000671060.1 |
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| CDS CCA 90 bp | TCCTGGACAGCCAGGGTCCCTCTTTGCTCTGCTCACTTATCACGTTaGTCTTCCTATCCTGGAGTGTGGCTCACTCTCCACACCATCAAC | + |
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Preference number: 5 (lower is better) Translates to: SWTARVPLCSAHLSR*SSYPGVWLTLHTIN Trigger: GTTGATGGTGTGGAGAGTGAGCCACACTCCAGGATAGGAAGACCAACGTGATAAGTGAGCAGAGCAAAGAGGGACCCTGGCTGTCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS TCA 90 bp | CAGACTTATCCTTCTAGGTCAGCAAATCTGGAGAGCCTCTCCTCTTaGTCTAGGGTGAGCCAAGTGCCTCTTTGTTCCCTTTGCCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: QTYPSRSANLESLSS*SRVSQVPLCSLCPV Trigger: CACTGGGCAAAGGGAACAAAGAGGCACTTGGCTCACCCTAGATCAAGAGGAGAGGCTCTCCAGATTTGCTGACCTAGAAGGATAAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653178.1 ENST00000660821.1 |
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| CDS CCA 90 bp | GTGTGTTTAGAGCTTCCCGAGGAACAACCACAGACTGAGAGACTCTaGGACATGAGCACAGCCATAGCTTCCAGTCCTTCCTATGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VCLELPEEQPQTERL*DMSTAIASSPSYVC Trigger: ACACACATAGGAAGGACTGGAAGCTATGGCTGTGCTCATGTCCCAGAGTCTCTCAGTCTGTGGTTGTTCCTCGGGAAGCTCTAAACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CCA 90 bp | GAATTCCCATGGTGGAAGACAAACCCATCTTTAAACACCAGTCTCTaGGTCTCTCCTGACTCCACTGCTTCTCCAGTGCAGGGCATAGAA | + |
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Preference number: 5 (lower is better) Translates to: EFPWWKTNPSLNTSL*VSPDSTASPVQGIE Trigger: TTCTATGCCCTGCACTGGAGAAGCAGTGGAGTCAGGAGAGACCCAGAGACTGGTGTTTAAAGATGGGTTTGTCTTCCACCATGGGAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CCA 90 bp | CTACCAAGATGGAGCTGTACACAGTACAACGCAAAGCCTAATAACTaGAGCAACATCCGTGAAGAAGGAAGGAAGTCGGCGGTCTCGCTT | + |
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Preference number: 5 (lower is better) Translates to: LPRWSCTQYNAKPNN*SNIREEGRKSAVSL Trigger: AAGCGAGACCGCCGACTTCCTTCCTTCTTCACGGATGTTGCTCCAGTTATTAGGCTTTGCGTTGTACTGTGTACAGCTCCATCTTGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CCA 90 bp | CATTCGAATATGAGCTCCATGGGGGCAGGCACCATATTTGTCTTGTaGCAGATGTTAGCCTCTCAAGGTTTTGCTTGCACCTTGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: HSNMSSMGAGTIFVL*QMLASQGFACTLWQ Trigger: CTGCCACAAGGTGCAAGCAAAACCTTGAGAGGCTAACATCTGCCACAAGACAAATATGGTGCCTGCCCCCATGGAGCTCATATTCGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000661976.1 ENST00000663287.1 ENST00000667429.1 |
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| CDS CCA 90 bp | TCAGCATCAACAGTGTCCTTCGATACAGGCCTTTTCTCCCTGCACTaGCACCCCGTTCATAAACACCTGCCATTTCTAATCACACCAACC | + |
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Preference number: 5 (lower is better) Translates to: SASTVSFDTGLFSLH*HPVHKHLPFLITPT Trigger: GGTTGGTGTGATTAGAAATGGCAGGTGTTTATGAACGGGGTGCCAGTGCAGGGAGAAAAGGCCTGTATCGAAGGACACTGTTGATGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS CCA 90 bp | GGTCCCTCTTTGCTCTGCTCACTTATCACGTTGGTCTTCCTATCCTaGAGTGTGGCTCACTCTCCACACCATCAACTGTTTAATTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GPSLLCSLITLVFLS*SVAHSPHHQLFNCC Trigger: GCAGCAATTAAACAGTTGATGGTGTGGAGAGTGAGCCACACTCCAGGATAGGAAGACCAACGTGATAAGTGAGCAGAGCAAAGAGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS TCA 90 bp | CTTCAGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTaGGTGACTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCTCG | + |
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Preference number: 5 (lower is better) Translates to: LQQSHIITSNGCFSY*VTSGLPSQVSSHIS Trigger: CGAGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000415294.3 ENST00000655206.1 ENST00000658308.1 ENST00000660294.1 ENST00000661782.1 ENST00000663045.1 ENST00000668279.1 ENST00000668966.1 ENST00000669497.1 ENST00000670546.1 ENST00000670771.1 ENST00000670821.1 |
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| CDS TCA 90 bp | AGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTGAGTaGCTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCCTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: SNPTLLLLTDVSPTE*LLACRLRCPPISSQ Trigger: TTGGGAGGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000598229.2 ENST00000656539.1 ENST00000659909.1 ENST00000660976.1 ENST00000661301.1 ENST00000668272.1 ENST00000669655.1 ENST00000671026.1 ENST00000671060.1 |
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| CDS TCA 90 bp | CTTCAGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTaGGTGACTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCCTC | + |
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Preference number: 5 (lower is better) Translates to: LQQSHIITSNGCFSY*VTSGLPSQVSSHIL Trigger: GAGGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000598229.2 ENST00000656539.1 ENST00000659909.1 ENST00000660560.1 ENST00000660976.1 ENST00000661301.1 ENST00000668272.1 ENST00000669655.1 ENST00000670303.1 ENST00000671026.1 ENST00000671060.1 |
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| CDS TCA 90 bp | AGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTGAGTaGCTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCCTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SNPTLLLLTDVSPTE*LLACRLRCPPISSR Trigger: CCTTGAGGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660560.1 ENST00000670303.1 |
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| CDS TCA 90 bp | CTTCAGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTaGGTGACTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCTGC | + |
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Preference number: 5 (lower is better) Translates to: LQQSHIITSNGCFSY*VTSGLPSQVSSHIC Trigger: GCAGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663194.1 |
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| CDS GCA 90 bp | CGGTCAGCTGTGTGGTTTGAGGAAGCTGACACCATCTCAAGGTTTTaGTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: RSAVWFEEADTISRF*LHLVAVLIPFASPG Trigger: TCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGATGGTGTCAGCTTCCTCAAACCACACAGCTGACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
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| CDS CCA 90 bp | CATTCGAATATGAGCTCCATGGGGGCAGGCACCATATTTGTCTTGTaGCAGATGTTAGCCTCTGATTGGGCAGAATATCCCAGACTGCTT | + |
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Preference number: 5 (lower is better) Translates to: HSNMSSMGAGTIFVL*QMLASDWAEYPRLL Trigger: AAGCAGTCTGGGATATTCTGCCCAATCAGAGGCTAACATCTGCCACAAGACAAATATGGTGCCTGCCCCCATGGAGCTCATATTCGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000654919.1 ENST00000655062.1 ENST00000656267.1 ENST00000656479.1 ENST00000656920.1 ENST00000657324.1 ENST00000658169.1 ENST00000659165.1 ENST00000661079.1 ENST00000663194.1 ENST00000665747.1 ENST00000666948.1 ENST00000668080.1 ENST00000669035.1 ENST00000669706.1 ENST00000669887.1 |
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| CDS CCA 90 bp | CAACTGTCTTTTGACAAACGATCTCTTTCTCCACGGTCAGCTGTGTaGTTTGAGGAAGCTGACACCATTGCTCATTCAGCCCTGTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: QLSFDKRSLSPRSAV*FEEADTIAHSALLA Trigger: AGCCAACAGGGCTGAATGAGCAATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTGGAGAAAGAGATCGTTTGTCAAAAGACAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670430.1 ENST00000671026.1 |
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| CDS TCA 90 bp | AGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTGAGTaGCTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: SNPTLLLLTDVSPTE*LLACRLRCPPISAH Trigger: ATGAGCAGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663194.1 |
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| CDS TCA 90 bp | CTTCAGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTaGGTGACTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCCTT | + |
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Preference number: 5 (lower is better) Translates to: LQQSHIITSNGCFSY*VTSGLPSQVSSHIL Trigger: AAGGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662500.1 ENST00000663969.1 ENST00000667987.1 |
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| CDS GCA 90 bp | GGCAGGCACCATATTTGTCTTGTGGCAGATGTTAGCCTCCCAGACTaGTTTATAGAGGATGTAATCCATTGTGACGCTACTAAAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GRHHICLVADVSLPD*FIEDVIHCDATKGR Trigger: CCTGCCTTTAGTAGCGTCACAATGGATTACATCCTCTATAAAGCAGTCTGGGAGGCTAACATCTGCCACAAGACAAATATGGTGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000598478.2 ENST00000608220.6 ENST00000655448.1 ENST00000656646.1 ENST00000658711.1 ENST00000660236.1 ENST00000661817.1 ENST00000667217.1 ENST00000669144.1 ENST00000669507.1 ENST00000670308.1 ENST00000670433.1 |
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| CDS CCA 90 bp | CATTCAAGAGGAAAGGATGTGAAGGTTAGGAGCATGAGGGCCCCCTaGCTTCTATTCACCACACGATCTACCATCCCATTTTACAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: HSRGKDVKVRSMRAP*LLFTTRSTIPFYRN Trigger: GTTTCTGTAAAATGGGATGGTAGATCGTGTGGTGAATAGAAGCCAGGGGGCCCTCATGCTCCTAACCTTCACATCCTTTCCTCTTGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS TCA 90 bp | AGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTGAGTaGCTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCTCGTTAT | + |
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Preference number: 5 (lower is better) Translates to: SNPTLLLLTDVSPTE*LLACRLRCPPISRY Trigger: ATAACGAGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000415294.3 ENST00000655206.1 ENST00000658308.1 ENST00000660294.1 ENST00000661782.1 ENST00000663045.1 ENST00000668279.1 ENST00000668966.1 ENST00000669497.1 ENST00000670546.1 ENST00000670771.1 ENST00000670821.1 |
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| CDS CCA 90 bp | TTCCTCCTGGCTAGCAGATGGTCACATTCTTACTGTGGCCTCATGTaGCAGAGGAAGAATGAAAACCTGTGGTGTGTTTTTCTTACAAGG | + |
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Preference number: 5 (lower is better) Translates to: FLLASRWSHSYCGLM*QRKNENLWCVFLTR Trigger: CCTTGTAAGAAAAACACACCACAGGTTTTCATTCTTCCTCTGCCACATGAGGCCACAGTAAGAATGTGACCATCTGCTAGCCAGGAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 20 transcripts: ENST00000454555.2 ENST00000655062.1 ENST00000656290.1 ENST00000656615.1 ENST00000657599.1 ENST00000658024.1 ENST00000658095.1 ENST00000658692.1 ENST00000659258.1 ENST00000662776.1 ENST00000664201.1 ENST00000664695.1 ENST00000666696.1 ENST00000667106.1 ENST00000668396.1 ENST00000668581.1 ENST00000669264.1 ENST00000669675.1 ENST00000670430.1 ENST00000670530.1 |
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| CDS CCA 90 bp | TGTCTGGAAGCCTTACAGGAACTGAAAGGACCCACGTGGAACAGCTaGCAACTGAAACTCATCTTGTCAATTTCAAGTGTAGTCCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: CLEALQELKGPTWNS*QLKLILSISSVVPL Trigger: AAGAGGGACTACACTTGAAATTGACAAGATGAGTTTCAGTTGCCAGCTGTTCCACGTGGGTCCTTTCAGTTCCTGTAAGGCTTCCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599179.2 |
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| CDS CCA 90 bp | TCATGCCAGTGTCTGGAAGCCTTACAGGAACTGAAAGGACCCACGTaGAACAGCTGGCAACTGAAACTCATCTTGTCAATTTCAAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: SCQCLEALQELKGPT*NSWQLKLILSISSV Trigger: TACACTTGAAATTGACAAGATGAGTTTCAGTTGCCAGCTGTTCCACGTGGGTCCTTTCAGTTCCTGTAAGGCTTCCAGACACTGGCATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599179.2 |
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| CDS CCA 90 bp | GTGTTCTCAGCTATGCAAGAATCCACTTTTAATCTCATTCAGGTTTaGGGCAGAATCAGCTTGCAGCTGCATGATTCAGAGCCTCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: VFSAMQESTFNLIQV*GRISLQLHDSEPQL Trigger: CAGCTGAGGCTCTGAATCATGCAGCTGCAAGCTGATTCTGCCCCAAACCTGAATGAGATTAAAAGTGGATTCTTGCATAGCTGAGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CCA 90 bp | CATTCGAATATGAGCTCCATGGGGGCAGGCACCATATTTGTCTTGTaGCAGATGTTAGCCTCTGATTGGGCAGAATATCTCAAGGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: HSNMSSMGAGTIFVL*QMLASDWAEYLKVL Trigger: CAAAACCTTGAGATATTCTGCCCAATCAGAGGCTAACATCTGCCACAAGACAAATATGGTGCCTGCCCCCATGGAGCTCATATTCGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655173.1 ENST00000655201.1 ENST00000664140.1 |
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| CDS CCA 90 bp | CAACTGTCTTTTGACAAACGATCTCTTTCTCCACGGTCAGCTGTGTaGTTTGAGGAAGCTGACACCATCTCAAGGTTTTGCTTGCACCTT | + |
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Preference number: 5 (lower is better) Translates to: QLSFDKRSLSPRSAV*FEEADTISRFCLHL Trigger: AAGGTGCAAGCAAAACCTTGAGATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTGGAGAAAGAGATCGTTTGTCAAAAGACAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
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| CDS CCA 90 bp | CATTCGAATATGAGCTCCATGGGGGCAGGCACCATATTTGTCTTGTaGCAGATGTTAGCCTCTGATTGGGCAGAATATCTTGAGTATCAG | + |
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Preference number: 5 (lower is better) Translates to: HSNMSSMGAGTIFVL*QMLASDWAEYLEYQ Trigger: CTGATACTCAAGATATTCTGCCCAATCAGAGGCTAACATCTGCCACAAGACAAATATGGTGCCTGCCCCCATGGAGCTCATATTCGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671516.1 |
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| CDS TCA 90 bp | GGTGTTATACGACTGCATATGTTAAGTGTATCTCCCTTGCGTAGTTaGATGGTGTGGGAGTGCACTGTTAAACCATCTGGTTGGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GVIRLHMLSVSPLRS*MVWECTVKPSGWSS Trigger: ACTGGACCAACCAGATGGTTTAACAGTGCACTCCCACACCATTCAACTACGCAAGGGAGATACACTTAACATATGCAGTCGTATAACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 120 transcripts: ENST00000415294.3 ENST00000454555.2 ENST00000596398.6 ENST00000598478.2 ENST00000599179.2 ENST00000599264.2 ENST00000601607.6 ENST00000608426.2 ENST00000653082.1 ENST00000653178.1 ENST00000653504.1 ENST00000653600.1 ENST00000654086.1 ENST00000654132.1 ENST00000654352.1 ENST00000654904.1 ENST00000654919.1 ENST00000655062.1 ENST00000655173.1 ENST00000655201.1 ENST00000655206.1 ENST00000655448.1 ENST00000655625.1 ENST00000655741.1 ENST00000656267.1 ENST00000656290.1 ENST00000656479.1 ENST00000656539.1 ENST00000656615.1 ENST00000656646.1 ENST00000656920.1 ENST00000657324.1 ENST00000657599.1 ENST00000657690.1 ENST00000658024.1 ENST00000658095.1 ENST00000658169.1 ENST00000658308.1 ENST00000658692.1 ENST00000658711.1 ENST00000659016.1 ENST00000659165.1 ENST00000659258.1 ENST00000659496.1 ENST00000659909.1 ENST00000660236.1 ENST00000660294.1 ENST00000660560.1 ENST00000660821.1 ENST00000660976.1 ENST00000661079.1 ENST00000661301.1 ENST00000661782.1 ENST00000661817.1 ENST00000661872.1 ENST00000661976.1 ENST00000662500.1 ENST00000663045.1 ENST00000663194.1 ENST00000663287.1 ENST00000663594.1 ENST00000663744.1 ENST00000663761.1 ENST00000663969.1 ENST00000664090.1 ENST00000664140.1 ENST00000664201.1 ENST00000664522.1 ENST00000664695.1 ENST00000664796.1 ENST00000665309.1 ENST00000665747.1 ENST00000666040.1 ENST00000666322.1 ENST00000666696.1 ENST00000666948.1 ENST00000667106.1 ENST00000667217.1 ENST00000667429.1 ENST00000667492.1 ENST00000667582.1 ENST00000667685.1 ENST00000667987.1 ENST00000668080.1 ENST00000668272.1 ENST00000668279.1 ENST00000668362.1 ENST00000668396.1 ENST00000668581.1 ENST00000668939.1 ENST00000669035.1 ENST00000669144.1 ENST00000669264.1 ENST00000669497.1 ENST00000669507.1 ENST00000669540.1 ENST00000669655.1 ENST00000669675.1 ENST00000669706.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670114.1 ENST00000670303.1 ENST00000670308.1 ENST00000670430.1 ENST00000670433.1 ENST00000670530.1 ENST00000670546.1 ENST00000670555.1 ENST00000670771.1 ENST00000670821.1 ENST00000670977.1 ENST00000671026.1 ENST00000671053.1 ENST00000671060.1 ENST00000671402.1 ENST00000671516.1 ENST00000671561.1 |
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| CDS TCA 90 bp | AGCAATCCCACATTATTACTTCTAACGGATGTTTCTCCTACTGAGTaGCTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATATCCTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: SNPTLLLLTDVSPTE*LLACRLRCPPISFI Trigger: AATAAAGGATATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662500.1 ENST00000663969.1 ENST00000667987.1 |
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| CDS TCA 90 bp | TCAAATACTGCCTGTGCAACTGAGATGTGTCCCTGGGCTAATTACTaGCCTCTAGTTCCTCCATTTCCTCAGCTGTCATATTGTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNTACATEMCPWANY*PLVPPFPQLSYCEK Trigger: CTTCTCACAATATGACAGCTGAGGAAATGGAGGAACTAGAGGTCAGTAATTAGCCCAGGGACACATCTCAGTTGCACAGGCAGTATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS GCA 90 bp | CAAATGTACACAGCCAAGGGTACTTCATTCTTGGAGTTGAGTCTTTaGATTTCATCCTCCAGAGTGAGAATAGACTGCGTGTTGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QMYTAKGTSFLELSL*ISSSRVRIDCVLER Trigger: CCTCTCCAACACGCAGTCTATTCTCACTCTGGAGGATGAAATGCAAAGACTCAACTCCAAGAATGAAGTACCCTTGGCTGTGTACATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
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| CDS GCA 90 bp | AGGCACCATATTTGTCTTGTGGCAGATGTTAGCCTCTCAAGGTTTTaGTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RHHICLVADVSLSRF*LHLVAVLIPFASPG Trigger: TCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAGGCTAACATCTGCCACAAGACAAATATGGTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661976.1 ENST00000663287.1 ENST00000667429.1 |
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| CDS TCA 90 bp | CAGATGGTCACATTCTTACTGTGGCCTCATGTGGCAGAGGAAGAATaGAAACCTGTGGTGTGTTTTTCTTACAAGGGCACAAATTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QMVTFLLWPHVAEEE*KPVVCFSYKGTNFT Trigger: GGTGAAATTTGTGCCCTTGTAAGAAAAACACACCACAGGTTTTCATTCTTCCTCTGCCACATGAGGCCACAGTAAGAATGTGACCATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000454555.2 ENST00000655062.1 ENST00000656290.1 ENST00000656615.1 ENST00000657599.1 ENST00000658024.1 ENST00000658095.1 ENST00000658692.1 ENST00000659258.1 ENST00000662776.1 ENST00000664201.1 ENST00000664695.1 ENST00000666696.1 ENST00000667106.1 ENST00000668396.1 ENST00000668581.1 ENST00000669264.1 ENST00000669675.1 ENST00000670430.1 ENST00000670530.1 |
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| CDS TCA 90 bp | TCATCTGCAAATGGCATCCCATGGGTCCTCGGCAAAGCACAGAAATaGATTTCAGATACCTGCCATAATTCTTCTGCTGCTGTCCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSANGIPWVLGKAQK*ISDTCHNSSAAVLK Trigger: TTTAAGGACAGCAGCAGAAGAATTATGGCAGGTATCTGAAATTCATTTCTGTGCTTTGCCGAGGACCCATGGGATGCCATTTGCAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000599264.2 ENST00000653082.1 ENST00000655625.1 ENST00000655741.1 ENST00000657324.1 ENST00000659016.1 ENST00000661301.1 ENST00000661782.1 ENST00000661817.1 ENST00000663594.1 ENST00000663744.1 ENST00000664090.1 ENST00000664522.1 ENST00000666696.1 ENST00000667685.1 ENST00000668581.1 ENST00000668939.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670308.1 |
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| CDS TCA 90 bp | TGTGTGAAGCTCTCAGTTGGTGCCTGGAAGGTAGAAGGCACTCCATaGGCGTTGGCCATTCTTATTATTGCAAGAATAACTTTGTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CVKLSVGAWKVEGTP*ALAILIIARITLSQ Trigger: TTGAGACAAAGTTATTCTTGCAATAATAAGAATGGCCAACGCTCATGGAGTGCCTTCTACCTTCCAGGCACCAACTGAGAGCTTCACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS TCA 90 bp | GTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VMGWLGQMVFLVLDP*GIATLTSTMVELVY Trigger: GTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658151.1 ENST00000667582.1 ENST00000670429.1 |
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| CDS GCA 90 bp | GGAAATATAATGCAGCTGTTAAAAACATCATCACCATGGCTGGAATaGTGTGTTCAAATACTGCCTGTGCAACTGAGATGTGTCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GNIMQLLKTSSPWLE*CVQILPVQLRCVPG Trigger: CCCAGGGACACATCTCAGTTGCACAGGCAGTATTTGAACACAGCATTCCAGCCATGGTGATGATGTTTTTAACAGCTGCATTATATTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414368.2 ENST00000666723.1 |
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| CDS GCA 90 bp | ATAGTCTCCTCAACGGTGTCCAAATTCGATTTTCTCACCCCAGACTaGTTTATAGAGGATGTAATCCATTGTGACGCTACTAAAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IVSSTVSKFDFLTPD*FIEDVIHCDATKGR Trigger: CCTGCCTTTAGTAGCGTCACAATGGATTACATCCTCTATAAAGCAGTCTGGGGTGAGAAAATCGAATTTGGACACCGTTGAGGAGACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 27 transcripts: ENST00000608624.6 ENST00000653082.1 ENST00000653178.1 ENST00000654086.1 ENST00000654132.1 ENST00000654352.1 ENST00000654904.1 ENST00000655206.1 ENST00000655741.1 ENST00000658024.1 ENST00000659496.1 ENST00000662776.1 ENST00000663761.1 ENST00000663969.1 ENST00000664201.1 ENST00000664522.1 ENST00000666322.1 ENST00000667492.1 ENST00000668362.1 ENST00000669886.1 ENST00000669959.1 ENST00000670546.1 ENST00000670555.1 ENST00000671026.1 ENST00000671060.1 ENST00000671402.1 ENST00000671561.1 |
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| CDS CCA 90 bp | CATTCGAATATGAGCTCCATGGGGGCAGGCACCATATTTGTCTTGTaGCAGATGTTAGCCTCTGATTGGGCAGAATATCTGATACATAAT | + |
|
Preference number: 5 (lower is better) Translates to: HSNMSSMGAGTIFVL*QMLASDWAEYLIHN Trigger: ATTATGTATCAGATATTCTGCCCAATCAGAGGCTAACATCTGCCACAAGACAAATATGGTGCCTGCCCCCATGGAGCTCATATTCGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414368.2 ENST00000666723.1 |
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| CDS TCA 90 bp | CACCACACGATCTACCATCCCATTTTACAGAAACAGTGTCTGAAATaGTGGCTTGCTAGAATTCCCATGGTGGAAGACAAACCCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HHTIYHPILQKQCLK*WLARIPMVEDKPIF Trigger: AAAGATGGGTTTGTCTTCCACCATGGGAATTCTAGCAAGCCATCATTTCAGACACTGTTTCTGTAAAATGGGATGGTAGATCGTGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS TCA 90 bp | GAAGGATACATGGAAGCCTATGTAACAGACAGAGAAGTGGAGGTTTaGGACTGGCTACGCTTTTTGCACCTAGTTCATATTAGCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGYMEAYVTDREVEV*DWLRFLHLVHISFW Trigger: CCAAAAGCTAATATGAACTAGGTGCAAAAAGCGTAGCCAGTCTCAAACCTCCACTTCTCTGTCTGTTACATAGGCTTCCATGTATCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669840.1 |
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| CDS TCA 90 bp | TCATCCAGACTATTTGCCCATCACAGGTTTTCTCTTTTCACTCACTaGGCTGAGTATAGACAGTCTCTCAGACACTTCCAGATTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSRLFAHHRFSLFTH*AEYRQSLRHFQIVH Trigger: ATGGACAATCTGGAAGTGTCTGAGAGACTGTCTATACTCAGCTCAGTGAGTGAAAAGAGAAAACCTGTGATGGGCAAATAGTCTGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS GCA 90 bp | TTGGAGTTGAGTCTTTGCATTTCATCCTCCAGAGTGAGAATAGACTaGGTGTTGGAGAGGTCAGGGAAATTATGTCTTTCTATGTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: LELSLCISSSRVRID*VLERSGKLCLSMSS Trigger: GCTAGACATAGAAAGACATAATTTCCCTGACCTCTCCAACACGCAGTCTATTCTCACTCTGGAGGATGAAATGCAAAGACTCAACTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
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| CDS CCA 90 bp | CACATACCCTGCTTATGTGTCCAGGAGCAGAAGAAAACCTGGATTTaGATGAGCAGAGAGGAGTCCCTATCACAGTTCACTAAATTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HIPCLCVQEQKKTWI*MSREESLSQFTKLN Trigger: ATTTAATTTAGTGAACTGTGATAGGGACTCCTCTCTGCTCATCCAAATCCAGGTTTTCTTCTGCTCCTGGACACATAAGCAGGGTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000660294.1 ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
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| CDS CCA 90 bp | TTATTTAAAGGCAAGTTGGTGCCCTTACTCCTTTCCAGAGCTTTTTaGCTCAGTGAAACTCTTTCTAACCATATACGCCTGCCTGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LFKGKLVPLLLSRAF*LSETLSNHIRLPVS Trigger: GGATACAGGCAGGCGTATATGGTTAGAAAGAGTTTCACTGAGCCAAAAAGCTCTGGAAAGGAGTAAGGGCACCAACTTGCCTTTAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000667534.1 ENST00000669840.1 |
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| CDS TCA 90 bp | AGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTaGACTAGTTTACAGTACCACCAACAGTGTAAAAGTGTTCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLRNRHTDFHNG*TSLQYHQQCKSVPI Trigger: AATAGGAACACTTTTACACTGTTGGTGGTACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658151.1 ENST00000667582.1 ENST00000670429.1 |
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| CDS TCA 90 bp | GACAAAAATATTACCATCTTTGGGAGTATTGCTAGCAGGATTGAGTaGGTTAATATGTGTGAAGCTCTCAGTTGGTGCCTGGAAGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: DKNITIFGSIASRIE*VNMCEALSWCLEGR Trigger: TCTACCTTCCAGGCACCAACTGAGAGCTTCACACATATTAACTCACTCAATCCTGCTAGCAATACTCCCAAAGATGGTAATATTTTTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS GCA 90 bp | CACCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: HLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000596398.6 ENST00000601607.6 ENST00000608426.2 ENST00000653504.1 ENST00000657690.1 ENST00000661872.1 ENST00000667106.1 ENST00000668272.1 ENST00000668396.1 ENST00000670114.1 ENST00000670430.1 ENST00000670771.1 ENST00000670821.1 |
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| CDS GCA 90 bp | CCTCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661976.1 ENST00000663287.1 ENST00000667429.1 |
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| CDS CCA 90 bp | AAGAGCTGGAAGATAAAGCTATTCTTTAGTTTTCTCATCTGCAAATaGCATCCCATGGGTCCTCGGCAAAGCACAGAAATGAATTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KSWKIKLFFSFLICK*HPMGPRQSTEMNFR Trigger: TCTGAAATTCATTTCTGTGCTTTGCCGAGGACCCATGGGATGCCATTTGCAGATGAGAAAACTAAAGAATAGCTTTATCTTCCAGCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 22 transcripts: ENST00000599264.2 ENST00000653082.1 ENST00000655625.1 ENST00000655741.1 ENST00000657324.1 ENST00000659016.1 ENST00000661301.1 ENST00000661782.1 ENST00000661817.1 ENST00000663594.1 ENST00000663744.1 ENST00000664090.1 ENST00000664522.1 ENST00000666696.1 ENST00000667685.1 ENST00000668581.1 ENST00000668939.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670308.1 |
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| CDS CCA 90 bp | TGGAGAGAAATCAAAACTCTGTATTTGCATACTAGGCCAACTCTTTaGTATCCTTGGTGGGTCTTTTCTTATCCTCTTGGTCCTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WREIKTLYLHTRPTL*YPWWVFSYPLGPSF Trigger: AAAGGAAGGACCAAGAGGATAAGAAAAGACCCACCAAGGATACCAAAGAGTTGGCCTAGTATGCAAATACAGAGTTTTGATTTCTCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669840.1 |
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| CDS CCA 90 bp | TTCACCAAATATCCAGATTGGTCTGGTCTGAACAATTTAGATGTTTaGAGTCTACAACAACATAGCACATATGCACTCCACCCAGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FTKYPDWSGLNNLDV*SLQQHSTYALHPVR Trigger: TCTGACTGGGTGGAGTGCATATGTGCTATGTTGTTGTAGACTCCAAACATCTAAATTGTTCAGACCAGACCAATCTGGATATTTGGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS CCA 90 bp | AAGAATATATTTCATAATTGTAGTGCTCCCATTCCCCAGAGTGAGTaGTTTAAGATCCACAGCAGAGGTTCTGTTCCAAGTAAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNIFHNCSAPIPQSE*FKIHSRGSVPSKSL Trigger: CAGAGACTTACTTGGAACAGAACCTCTGCTGTGGATCTTAAACCACTCACTCTGGGGAATGGGAGCACTACAATTATGAAATATATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667534.1 |
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| CDS TCA 90 bp | GGATATGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATaGAATAAAAGAGGATACAAACAAATGGAGGAACATTCCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GYEGPLQGELQTTAQ*NKRGYKQMEEHSML Trigger: GAGCATGGAATGTTCCTCCATTTGTTTGTATCCTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCATATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658151.1 ENST00000667582.1 ENST00000670429.1 |
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| CDS TCA 90 bp | GAGATAGAAGACATAGTAGAGTGGAGTTATCCATTGACTGCAGGTTaGTTGATGGAAAAGTGGCAAGGAGGAAGAATCAATTTCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EIEDIVEWSYPLTAG*LMEKWQGGRINFPK Trigger: TTTTGGGAAATTGATTCTTCCTCCTTGCCACTTTTCCATCAATCAACCTGCAGTCAATGGATAACTCCACTCTACTATGTCTTCTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667534.1 ENST00000669840.1 |
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| CDS GCA 90 bp | TACCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
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Preference number: 5 (lower is better) Translates to: YLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 38 transcripts: ENST00000415294.3 ENST00000599264.2 ENST00000653082.1 ENST00000653178.1 ENST00000653600.1 ENST00000654352.1 ENST00000654919.1 ENST00000655625.1 ENST00000655741.1 ENST00000656479.1 ENST00000657324.1 ENST00000658024.1 ENST00000658711.1 ENST00000659016.1 ENST00000659165.1 ENST00000660821.1 ENST00000661301.1 ENST00000661782.1 ENST00000662500.1 ENST00000663594.1 ENST00000663761.1 ENST00000664522.1 ENST00000664695.1 ENST00000665747.1 ENST00000666696.1 ENST00000667685.1 ENST00000668581.1 ENST00000669144.1 ENST00000669264.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670308.1 ENST00000670977.1 ENST00000671053.1 ENST00000671402.1 ENST00000671561.1 |
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| CDS GCA 90 bp | AGACTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: RLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000454555.2 ENST00000654086.1 ENST00000654904.1 ENST00000655062.1 ENST00000655448.1 ENST00000656615.1 ENST00000658169.1 ENST00000661817.1 ENST00000663744.1 ENST00000664090.1 ENST00000664796.1 ENST00000665309.1 ENST00000666322.1 ENST00000666948.1 ENST00000667217.1 ENST00000668939.1 ENST00000669540.1 ENST00000671516.1 |
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| CDS GCA 90 bp | TCACTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000599179.2 ENST00000670429.1 |
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| CDS GCA 90 bp | AAGCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: KLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 25 transcripts: ENST00000598478.2 ENST00000654132.1 ENST00000655206.1 ENST00000656267.1 ENST00000656920.1 ENST00000657599.1 ENST00000658308.1 ENST00000659496.1 ENST00000659909.1 ENST00000661079.1 ENST00000663194.1 ENST00000663969.1 ENST00000664201.1 ENST00000666040.1 ENST00000667492.1 ENST00000668080.1 ENST00000668362.1 ENST00000669035.1 ENST00000669507.1 ENST00000670433.1 ENST00000670530.1 ENST00000670546.1 ENST00000670555.1 ENST00000671026.1 ENST00000671060.1 |
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| CDS GCA 90 bp | GAACTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: ELKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000656290.1 ENST00000656539.1 ENST00000658095.1 ENST00000658692.1 ENST00000659258.1 ENST00000660294.1 ENST00000660976.1 ENST00000668279.1 |
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| CDS GCA 90 bp | ACTCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: TLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660236.1 ENST00000669706.1 |
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| CDS GCA 90 bp | ATCCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: ILKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660560.1 ENST00000670303.1 |
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| CDS GCA 90 bp | CTTCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658151.1 ENST00000667582.1 |
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| CDS GCA 90 bp | CATCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: HLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
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| CDS GCA 90 bp | TTCCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: FLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669840.1 |
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| CDS CCA 90 bp | GTTTCTATTATTCCATCAGATGCAGAAACAAAGGAAGTAGTAGTATaGGCTGCTTCATATTTTGAGACACAGAAGTCCAGACAGGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: VSIIPSDAETKEVVV*AASYFETQKSRQVP Trigger: AGGTACCTGTCTGGACTTCTGTGTCTCAAAATATGAAGCAGCCCATACTACTACTTCCTTTGTTTCTGCATCTGATGGAATAATAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS GCA 90 bp | TATCTCAAGGTTTTGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTaGATCTCCTGGAGGTGTTTACTAGCTTCTATATGCATATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: YLKVLLAPCGSSNSF*ISWRCLLASICIYY Trigger: GTAATATATGCATATAGAAGCTAGTAAACACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655173.1 ENST00000655201.1 ENST00000664140.1 |
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| CDS TCA 90 bp | GGAAATTATGTCTTTCTATGTCTAGCCCTTTATAGGTCGATTATTTaGATGCTTGACAGCATCTGTCCACTTATCTATCCCTGCAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: GNYVFLCLALYRSII*MLDSICPLIYPCNN Trigger: ATTATTGCAGGGATAGATAAGTGGACAGATGCTGTCAAGCATTCAAATAATCGACCTATAAAGGGCTAGACATAGAAAGACATAATTTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
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| CDS TCA 90 bp | AGTCATTCCATTGACACAGCTAATAGGACAGAATGTGGAAAATTATaGCTCGAAAGTATTTACTGTTTAGGGAGTCAGGCTTGGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SHSIDTANRTECGKL*LESIYCLGSQAWKY Trigger: ATATTTCCAAGCCTGACTCCCTAAACAGTAAATACTTTCGAGTCATAATTTTCCACATTCTGTCCTATTAGCTGTGTCAATGGAATGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
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| CDS TCA 90 bp | TTATTCCAAGTGAATCATTTCCATCCTGTACACCAGTACATGTGCTaGGCACACTTTCATAGACCAAAATTAGAACTGATGATTAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFQVNHFHPVHQYMC*AHFHRPKLELMINK Trigger: TTTGTTAATCATCAGTTCTAATTTTGGTCTATGAAAGTGTGCTCAGCACATGTACTGGTGTACAGGATGGAAATGATTCACTTGGAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS TCA 72 bp | ATGAGATGGGGATGTAGGCTGAAGAGCCGGCCTGGTTaGAGAGCCGTGGGAACACCCTCCTCCTTCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MRWGCRLKSRPG*RAVGTPSSFLP Trigger: AGGAAGGAAGGAGGAGGGTGTTCCCACGGCTCTTCAACCAGGCCGGCTCTTCAGCCTACATCCCCATCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 120 transcripts: ENST00000415294.3 ENST00000454555.2 ENST00000596398.6 ENST00000598478.2 ENST00000599179.2 ENST00000599264.2 ENST00000601607.6 ENST00000608426.2 ENST00000653082.1 ENST00000653178.1 ENST00000653504.1 ENST00000653600.1 ENST00000654086.1 ENST00000654132.1 ENST00000654352.1 ENST00000654904.1 ENST00000654919.1 ENST00000655062.1 ENST00000655173.1 ENST00000655201.1 ENST00000655206.1 ENST00000655448.1 ENST00000655625.1 ENST00000655741.1 ENST00000656267.1 ENST00000656290.1 ENST00000656479.1 ENST00000656539.1 ENST00000656615.1 ENST00000656646.1 ENST00000656920.1 ENST00000657324.1 ENST00000657599.1 ENST00000657690.1 ENST00000658024.1 ENST00000658095.1 ENST00000658169.1 ENST00000658308.1 ENST00000658692.1 ENST00000658711.1 ENST00000659016.1 ENST00000659165.1 ENST00000659258.1 ENST00000659496.1 ENST00000659909.1 ENST00000660236.1 ENST00000660294.1 ENST00000660560.1 ENST00000660821.1 ENST00000660976.1 ENST00000661079.1 ENST00000661301.1 ENST00000661782.1 ENST00000661817.1 ENST00000661872.1 ENST00000661976.1 ENST00000662500.1 ENST00000663045.1 ENST00000663194.1 ENST00000663287.1 ENST00000663594.1 ENST00000663744.1 ENST00000663761.1 ENST00000663969.1 ENST00000664090.1 ENST00000664140.1 ENST00000664201.1 ENST00000664522.1 ENST00000664695.1 ENST00000664796.1 ENST00000665309.1 ENST00000665747.1 ENST00000666040.1 ENST00000666322.1 ENST00000666696.1 ENST00000666948.1 ENST00000667106.1 ENST00000667217.1 ENST00000667429.1 ENST00000667492.1 ENST00000667582.1 ENST00000667685.1 ENST00000667987.1 ENST00000668080.1 ENST00000668272.1 ENST00000668279.1 ENST00000668362.1 ENST00000668396.1 ENST00000668581.1 ENST00000668939.1 ENST00000669035.1 ENST00000669144.1 ENST00000669264.1 ENST00000669497.1 ENST00000669507.1 ENST00000669540.1 ENST00000669655.1 ENST00000669675.1 ENST00000669706.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670114.1 ENST00000670303.1 ENST00000670308.1 ENST00000670430.1 ENST00000670433.1 ENST00000670530.1 ENST00000670546.1 ENST00000670555.1 ENST00000670771.1 ENST00000670821.1 ENST00000670977.1 ENST00000671026.1 ENST00000671053.1 ENST00000671060.1 ENST00000671402.1 ENST00000671516.1 ENST00000671561.1 |
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| CDS TCA 72 bp | ATGAAGTCTCCAATCTTCAGCTTGACGGTGGGGCCGTaGGTAACTGAGCCCTGCCTCCTGGACAGCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: MKSPIFSLTVGP*VTEPCLLDSQG Trigger: ACCCTGGCTGTCCAGGAGGCAGGGCTCAGTTACTCACGGCCCCACCGTCAAGCTGAAGATTGGAGACTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS GCA 72 bp | CCTTCTGCCTGCCCAGAAGTGTACCAGGCTCACTCGTaGCTTTGCTCACTCGGATGCCTCCCTAGATCACGT | + |
|
Preference number: 6 (lower is better) Translates to: PSACPEVYQAHS*LCSLGCLPRSR Trigger: ACGTGATCTAGGGAGGCATCCGAGTGAGCAAAGGCACGAGTGAGCCTGGTACACTTCTGGGCAGGCAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000454555.2 ENST00000653178.1 ENST00000653504.1 ENST00000656920.1 ENST00000659258.1 ENST00000667492.1 ENST00000669807.1 ENST00000671060.1 |
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| CDS GCA 72 bp | GCCTGCCCAGAAGTGTACCAGGCTCACTCGTGCCTTTaGTCACTCGGATGCCTCCCTAGATCACGTTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ACPEVYQAHSCL*SLGCLPRSRFH Trigger: GTGAAAACGTGATCTAGGGAGGCATCCGAGTGAGCAAAGGCACGAGTGAGCCTGGTACACTTCTGGGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000454555.2 ENST00000653178.1 ENST00000653504.1 ENST00000656920.1 ENST00000659258.1 ENST00000667492.1 ENST00000669807.1 ENST00000671060.1 |
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| CDS GCA 72 bp | CCCTGCCTCCTGGACAGCCAGGGTCCCTCTTTGCTCTaGTCACTTATCACGTTGGTCTTCCTATCCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PCLLDSQGPSLL*SLITLVFLSWS Trigger: ACTCCAGGATAGGAAGACCAACGTGATAAGTGAGCAGAGCAAAGAGGGACCCTGGCTGTCCAGGAGGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS CAA 90 bp | GATTCAGAGCCTCAGCTGATGCTGTTTGTTGATGAGATACTGGCCTaGGCGTGGGGATGTTCCCAGCATGGCTGCTCACGTCATCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DSEPQLMLFVDEILA*AWGCSQHGCSRHQA Trigger: GGCCTGATGACGTGAGCAGCCATGCTGGGAACATCCCCACGCCAAGGCCAGTATCTCATCAACAAACAGCATCAGCTGAGGCTCTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS GCA 72 bp | GACTCCTCTCTTTCCCTCCACCACATCACCCAGCTGTaGTCCTACTTACTGCTCATTCAGCCCTGTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DSSLSLHHITQL*SYLLLIQPCWL Trigger: CAGCCAACAGGGCTGAATGAGCAGTAAGTAGGAGCACAGCTGGGTGATGTGGTGGAGGGAAAGAGAGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS CCA 72 bp | CGGGTTCCAGTGAGGACTTTCCTCCTGGCTAGCAGATaGTCACATTCTTACTGTGGCCTCATGTGGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RVPVRTFLLASR*SHSYCGLMWQR Trigger: CCTCTGCCACATGAGGCCACAGTAAGAATGTGACCATCTGCTAGCCAGGAGGAAAGTCCTCACTGGAACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000454555.2 ENST00000655062.1 ENST00000656290.1 ENST00000656615.1 ENST00000657599.1 ENST00000658024.1 ENST00000658095.1 ENST00000658692.1 ENST00000659258.1 ENST00000662776.1 ENST00000664201.1 ENST00000664695.1 ENST00000666696.1 ENST00000667106.1 ENST00000668396.1 ENST00000668581.1 ENST00000669264.1 ENST00000669675.1 ENST00000670430.1 ENST00000670530.1 |
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| CDS CCA 72 bp | GAGCTTCCCGAGGAACAACCACAGACTGAGAGACTCTaGGACATGAGCACAGCCATAGCTTCCAGTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ELPEEQPQTERL*DMSTAIASSPS Trigger: GGAAGGACTGGAAGCTATGGCTGTGCTCATGTCCCAGAGTCTCTCAGTCTGTGGTTGTTCCTCGGGAAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CAA 72 bp | CCTCAGCTGATGCTGTTTGTTGATGAGATACTGGCCTaGGCGTGGGGATGTTCCCAGCATGGCTGCTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: PQLMLFVDEILA*AWGCSQHGCSR Trigger: ACGTGAGCAGCCATGCTGGGAACATCCCCACGCCAAGGCCAGTATCTCATCAACAAACAGCATCAGCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CAA 90 bp | CTCCTGGACAGCCAGGGTCCCTCTTTGCTCTGCTCACTTATCACGTaGGTCTTCCTATCCTGGAGTGTGGCTCACTCTCCACACCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLDSQGPSLLCSLIT*VFLSWSVAHSPHHQ Trigger: TTGATGGTGTGGAGAGTGAGCCACACTCCAGGATAGGAAGACCAACGTGATAAGTGAGCAGAGCAAAGAGGGACCCTGGCTGTCCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS GCA 72 bp | GTGTACCAGGCTCACTCGTGCCTTTGCTCACTCGGATaGCTCCCTAGATCACGTTTTCACCTCCCTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VYQAHSCLCSLG*LPRSRFHLPCS Trigger: TGAACAAGGGAGGTGAAAACGTGATCTAGGGAGGCATCCGAGTGAGCAAAGGCACGAGTGAGCCTGGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000454555.2 ENST00000653178.1 ENST00000653504.1 ENST00000656920.1 ENST00000659258.1 ENST00000667492.1 ENST00000669807.1 ENST00000671060.1 |
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| CDS CCA 72 bp | CTGATGCTGTTTGTTGATGAGATACTGGCCTTGGCGTaGGGATGTTCCCAGCATGGCTGCTCACGTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LMLFVDEILALA*GCSQHGCSRHQ Trigger: CTGATGACGTGAGCAGCCATGCTGGGAACATCCCCACGCCAAGGCCAGTATCTCATCAACAAACAGCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CAA 72 bp | AGCCAGGGTCCCTCTTTGCTCTGCTCACTTATCACGTaGGTCTTCCTATCCTGGAGTGTGGCTCACTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQGPSLLCSLIT*VFLSWSVAHSP Trigger: TGGAGAGTGAGCCACACTCCAGGATAGGAAGACCAACGTGATAAGTGAGCAGAGCAAAGAGGGACCCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS CAA 90 bp | ACTGGAGCAACATCCGTGAAGAAGGAAGGAAGTCGGCGGTCTCGCTaGCATTCAAGAGGAAAGGATGTGAAGGTTAGGAGCATGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGATSVKKEGSRRSR*HSRGKDVKVRSMRA Trigger: GGCCCTCATGCTCCTAACCTTCACATCCTTTCCTCTTGAATGCAAGCGAGACCGCCGACTTCCTTCCTTCTTCACGGATGTTGCTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CAA 72 bp | CACGGTCAGCTGTGTGGTTTGAGGAAGCTGACACCATaGCTCATTCAGCCCTGTTGGCTGCAGACTCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HGQLCGLRKLTP*LIQPCWLQTLS Trigger: ACTTAGAGTCTGCAGCCAACAGGGCTGAATGAGCAATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670430.1 ENST00000671026.1 |
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| CDS TCA 72 bp | TGGTGTGTTTTTCTTACAAGGGCACAAATTTCACCATaGGGCCCCACCCTCACGCCCACATCTAAGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WCVFLTRAQISP*GPTLTPTSKPS Trigger: ACTGGGCTTAGATGTGGGCGTGAGGGTGGGGCCTCATGGTGAAATTTGTGCCCTTGTAAGAAAAACACACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 20 transcripts: ENST00000454555.2 ENST00000655062.1 ENST00000656290.1 ENST00000656615.1 ENST00000657599.1 ENST00000658024.1 ENST00000658095.1 ENST00000658692.1 ENST00000659258.1 ENST00000662776.1 ENST00000664201.1 ENST00000664695.1 ENST00000666696.1 ENST00000667106.1 ENST00000668396.1 ENST00000668581.1 ENST00000669264.1 ENST00000669675.1 ENST00000670430.1 ENST00000670530.1 |
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| CDS TCA 72 bp | CCTTCTAGGTCAGCAAATCTGGAGAGCCTCTCCTCTTaGTCTAGGGTGAGCCAAGTGCCTCTTTGTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSRSANLESLSS*SRVSQVPLCSL Trigger: AAGGGAACAAAGAGGCACTTGGCTCACCCTAGATCAAGAGGAGAGGCTCTCCAGATTTGCTGACCTAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000598478.2 ENST00000653178.1 ENST00000660821.1 |
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| CDS GCA 72 bp | ACGCTAGGTTTCCTCAAAAGCACGGGATCAACACGCTaGATCTTCCTCAAGGTTTTGCTTGCACCTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TLGFLKSTGSTR*IFLKVLLAPCG Trigger: GCCACAAGGTGCAAGCAAAACCTTGAGGAAGATGCAGCGTGTTGATCCCGTGCTTTTGAGGAAACCTAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669840.1 |
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| CDS GCA 72 bp | CATCAACAGTGTCCTTCGATACAGGCCTTTTCTCCCTaGACTGGCACCCCGTTCATAAACACCTGCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: HQQCPSIQAFSP*TGTPFINTCHF Trigger: GAAATGGCAGGTGTTTATGAACGGGGTGCCAGTGCAGGGAGAAAAGGCCTGTATCGAAGGACACTGTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666723.1 |
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| CDS CCA 72 bp | GGAAAGGATGTGAAGGTTAGGAGCATGAGGGCCCCCTaGCTTCTATTCACCACACGATCTACCATCCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: GKDVKVRSMRAP*LLFTTRSTIPF Trigger: AAATGGGATGGTAGATCGTGTGGTGAATAGAAGCCAGGGGGCCCTCATGCTCCTAACCTTCACATCCTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CCA 72 bp | ATGAGCTCCATGGGGGCAGGCACCATATTTGTCTTGTaGCAGATGTTAGCCTCTCAAGGTTTTGCTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: MSSMGAGTIFVL*QMLASQGFACT Trigger: GGTGCAAGCAAAACCTTGAGAGGCTAACATCTGCCACAAGACAAATATGGTGCCTGCCCCCATGGAGCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000661976.1 ENST00000663287.1 ENST00000667429.1 |
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| CDS CAA 72 bp | ACATCCGTGAAGAAGGAAGGAAGTCGGCGGTCTCGCTaGCATTCAAGAGGAAAGGATGTGAAGGTTAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSVKKEGSRRSR*HSRGKDVKVRS Trigger: GCTCCTAACCTTCACATCCTTTCCTCTTGAATGCAAGCGAGACCGCCGACTTCCTTCCTTCTTCACGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CAA 90 bp | TGTCTTTTGACAAACGATCTCTTTCTCCACGGTCAGCTGTGTGGTTaGAGGAAGCTGACACCATTGCTCATTCAGCCCTGTTGGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CLLTNDLFLHGQLCG*RKLTPLLIQPCWLQ Trigger: CTGCAGCCAACAGGGCTGAATGAGCAATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTGGAGAAAGAGATCGTTTGTCAAAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670430.1 ENST00000671026.1 |
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| CDS TCA 72 bp | TCCCACATTATTACTTCTAACGGATGTTTCTCCTACTaGGTGACTTCTGGCCTGCCGTCTCAGGTGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHIITSNGCFSY*VTSGLPSQVSS Trigger: GGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 27 transcripts: ENST00000415294.3 ENST00000598229.2 ENST00000655206.1 ENST00000656539.1 ENST00000658308.1 ENST00000659909.1 ENST00000660294.1 ENST00000660560.1 ENST00000660976.1 ENST00000661301.1 ENST00000661782.1 ENST00000662500.1 ENST00000663045.1 ENST00000663194.1 ENST00000663969.1 ENST00000667987.1 ENST00000668272.1 ENST00000668279.1 ENST00000668966.1 ENST00000669497.1 ENST00000669655.1 ENST00000670303.1 ENST00000670546.1 ENST00000670771.1 ENST00000670821.1 ENST00000671026.1 ENST00000671060.1 |
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| CDS TCA 72 bp | AAACCCATCTTTAAACACCAGTCTCTGGGTCTCTCCTaGCTCCACTGCTTCTCCAGTGCAGGGCATAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KPIFKHQSLGLS*LHCFSSAGHRR Trigger: TCTTCTATGCCCTGCACTGGAGAAGCAGTGGAGTCAGGAGAGACCCAGAGACTGGTGTTTAAAGATGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS TCA 72 bp | CCCTTGAAAGTCCCTATGTATGGTAAGGTGACAGGGTaGGGGTCTCACCCCACTGATAGGTGCTTCCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: PLKVPMYGKVTG*GSHPTDRCFQY Trigger: ATATTGGAAGCACCTATCAGTGGGGTGAGACCCTCACCCTGTCACCTTACCATACATAGGGACTTTCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669840.1 |
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| CDS CCA 72 bp | TGGAGCTGTACACAGTACAACGCAAAGCCTAATAACTaGAGCAACATCCGTGAAGAAGGAAGGAAGTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: WSCTQYNAKPNN*SNIREEGRKSA Trigger: CGCCGACTTCCTTCCTTCTTCACGGATGTTGCTCCAGTTATTAGGCTTTGCGTTGTACTGTGTACAGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608624.6 |
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| CDS CCA 72 bp | ACAGTGTCCTTCGATACAGGCCTTTTCTCCCTGCACTaGCACCCCGTTCATAAACACCTGCCATTTCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: TVSFDTGLFSLH*HPVHKHLPFLI Trigger: GATTAGAAATGGCAGGTGTTTATGAACGGGGTGCCAGTGCAGGGAGAAAAGGCCTGTATCGAAGGACACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666723.1 |
||
| CDS CAA 72 bp | ACAAACGATCTCTTTCTCCACGGTCAGCTGTGTGGTTaGAGGAAGCTGACACCATTGCTCATTCAGCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TNDLFLHGQLCG*RKLTPLLIQPC Trigger: ACAGGGCTGAATGAGCAATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTGGAGAAAGAGATCGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670430.1 ENST00000671026.1 |
||
| CDS TCA 72 bp | GCCTGTGCAACTGAGATGTGTCCCTGGGCTAATTACTaGCCTCTAGTTCCTCCATTTCCTCAGCTGTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: ACATEMCPWANY*PLVPPFPQLSY Trigger: ATATGACAGCTGAGGAAATGGAGGAACTAGAGGTCAGTAATTAGCCCAGGGACACATCTCAGTTGCACAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414368.2 ENST00000666723.1 |
||
| CDS CCA 72 bp | ATACCCTGCTTATGTGTCCAGGAGCAGAAGAAAACCTaGATTTGGATGAGCAGAGAGGAGTCCCTATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: IPCLCVQEQKKT*IWMSREESLSQ Trigger: CTGTGATAGGGACTCCTCTCTGCTCATCCAAATCCAGGTTTTCTTCTGCTCCTGGACACATAAGCAGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000660294.1 ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
||
| CDS CCA 72 bp | TTTGACAAACGATCTCTTTCTCCACGGTCAGCTGTGTaGTTTGAGGAAGCTGACACCATTGCTCATTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FDKRSLSPRSAV*FEEADTIAHSA Trigger: GGCTGAATGAGCAATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTGGAGAAAGAGATCGTTTGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670430.1 ENST00000671026.1 |
||
| CDS CCA 72 bp | TTGCTCTGCTCACTTATCACGTTGGTCTTCCTATCCTaGAGTGTGGCTCACTCTCCACACCATCAACTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLCSLITLVFLS*SVAHSPHHQLF Trigger: AAACAGTTGATGGTGTGGAGAGTGAGCCACACTCCAGGATAGGAAGACCAACGTGATAAGTGAGCAGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
||
| CDS CAA 72 bp | GGCAGAAGGGGAAGCAACCACATCCTTCTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRRGSNHILLKV*LAPCGSSNSFC Trigger: GCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAAGGATGTGGTTGCTTCCCCTTCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658151.1 ENST00000667582.1 |
||
| CDS CAA 72 bp | ACAAACGATCTCTTTCTCCACGGTCAGCTGTGTGGTTaGAGGAAGCTGACACCATCTCAAGGTTTTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TNDLFLHGQLCG*RKLTPSQGFAC Trigger: GCAAGCAAAACCTTGAGATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTGGAGAAAGAGATCGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
||
| CDS CAA 72 bp | CTCAGGTGTCCTCCCATATCTGCTCATTCAGCCCTGTaGGCTGCAGACTCTAAGTGTCTCTTAAATCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: LRCPPISAHSAL*AADSKCLLNLS Trigger: GGATAGATTTAAGAGACACTTAGAGTCTGCAGCCAACAGGGCTGAATGAGCAGATATGGGAGGACACCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663194.1 |
||
| CDS CAA 72 bp | GAGCTGAGTATAGACAGTCTCTCAGACACTTCCAGATaGTCCATGGCAGGAAATTTCCTACCTGGACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELSIDSLSDTSR*SMAGNFLPGQQ Trigger: CTGCTGTCCAGGTAGGAAATTTCCTGCCATGGACAATCTGGAAGTGTCTGAGAGACTGTCTATACTCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
||
| CDS CAA 90 bp | TCATGGCAGAAGGGGAAGCAACCACATCCTTCTTCACTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWQKGKQPHPSSLKV*LAPCGSSNSFCISW Trigger: CCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTGAAGAAGGATGTGGTTGCTTCCCCTTCTGCCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000599179.2 ENST00000670429.1 |
||
| CDS CAA 90 bp | TCAGCTGTGTGGTTTGAGGAAGCTGACACCATCTCAAGGTTTTGCTaGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SAVWFEEADTISRFC*HLVAVLIPFASPGG Trigger: ACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGATGGTGTCAGCTTCCTCAAACCACACAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
||
| CDS CAA 90 bp | TGTCTTTTGACAAACGATCTCTTTCTCCACGGTCAGCTGTGTGGTTaGAGGAAGCTGACACCATCTCAAGGTTTTGCTTGCACCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CLLTNDLFLHGQLCG*RKLTPSQGFACTLW Trigger: CCACAAGGTGCAAGCAAAACCTTGAGATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTGGAGAAAGAGATCGTTTGTCAAAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
||
| CDS CAA 90 bp | TACAATCATGGCAGAAGGGGAAGCAACCACATCCTTCTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: YNHGRRGSNHILLKV*LAPCGSSNSFCISW Trigger: CCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAAGGATGTGGTTGCTTCCCCTTCTGCCATGATTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658151.1 ENST00000667582.1 |
||
| CDS TCA 72 bp | ACATTATTACTTCTAACGGATGTTTCTCCTACTGAGTaGCTTCTGGCCTGCCGTCTCAGGTGTCCTCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: TLLLLTDVSPTE*LLACRLRCPPI Trigger: TATGGGAGGACACCTGAGACGGCAGGCCAGAAGTCACTCAGTAGGAGAAACATCCGTTAGAAGTAATAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 27 transcripts: ENST00000415294.3 ENST00000598229.2 ENST00000655206.1 ENST00000656539.1 ENST00000658308.1 ENST00000659909.1 ENST00000660294.1 ENST00000660560.1 ENST00000660976.1 ENST00000661301.1 ENST00000661782.1 ENST00000662500.1 ENST00000663045.1 ENST00000663194.1 ENST00000663969.1 ENST00000667987.1 ENST00000668272.1 ENST00000668279.1 ENST00000668966.1 ENST00000669497.1 ENST00000669655.1 ENST00000670303.1 ENST00000670546.1 ENST00000670771.1 ENST00000670821.1 ENST00000671026.1 ENST00000671060.1 |
||
| CDS GCA 72 bp | AGTGTGGCTCACTCTCCACACCATCAACTGTTTAATTaGTGCCCACCCTTCAAATCTCAGCATCAACAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SVAHSPHHQLFN*CPPFKSQHQQC Trigger: ACACTGTTGATGCTGAGATTTGAAGGGTGGGCAGCAATTAAACAGTTGATGGTGTGGAGAGTGAGCCACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
||
| CDS CCA 72 bp | TGCTTATGTGTCCAGGAGCAGAAGAAAACCTGGATTTaGATGAGCAGAGAGGAGTCCCTATCACAGTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: CLCVQEQKKTWI*MSREESLSQFT Trigger: AGTGAACTGTGATAGGGACTCCTCTCTGCTCATCCAAATCCAGGTTTTCTTCTGCTCCTGGACACATAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000660294.1 ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
||
| CDS CCA 72 bp | CTTGTGCATATTCCATTGACCACAAGTCCAATGTCCTaGCCACAGCTAACTGCAACACATACCCTGCTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LVHIPLTTSPMS*PQLTATHTLLM Trigger: CATAAGCAGGGTATGTGTTGCAGTTAGCTGTGGCCAGGACATTGGACTTGTGGTCAATGGAATATGCACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000660294.1 ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
||
| CDS CCA 72 bp | TTTGACAAACGATCTCTTTCTCCACGGTCAGCTGTGTaGTTTGAGGAAGCTGACACCATCTCAAGGTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FDKRSLSPRSAV*FEEADTISRFC Trigger: GCAAAACCTTGAGATGGTGTCAGCTTCCTCAAACCACACAGCTGACCGTGGAGAAAGAGATCGTTTGTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
||
| CDS CAA 90 bp | AGTCTCCTCAACGGTGTCCAAATTCGATTTTCTCACCTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLLNGVQIRFSHLKV*LAPCGSSNSFCISW Trigger: CCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGGTGAGAAAATCGAATTTGGACACCGTTGAGGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000596398.6 ENST00000601607.6 ENST00000608426.2 ENST00000653504.1 ENST00000657690.1 ENST00000661872.1 ENST00000667106.1 ENST00000668272.1 ENST00000668396.1 ENST00000670114.1 ENST00000670430.1 ENST00000670771.1 ENST00000670821.1 |
||
| CDS CAA 90 bp | CACCATATTTGTCTTGTGGCAGATGTTAGCCTCTCAAGGTTTTGCTaGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HHICLVADVSLSRFC*HLVAVLIPFASPGG Trigger: ACCTCCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAGGCTAACATCTGCCACAAGACAAATATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661976.1 ENST00000663287.1 ENST00000667429.1 |
||
| CDS TCA 72 bp | CCTCCTTCCTTCCTTATTTCTTCTGAGGTGGAAGTGTaGTGCTCCAAAACAGTTCCTCTCTCTTCAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPSFLISSEVEV*CSKTVPLSSVP Trigger: AGGAACTGAAGAGAGAGGAACTGTTTTGGAGCATCACACTTCCACCTCAGAAGAAATAAGGAAGGAAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 120 transcripts: ENST00000415294.3 ENST00000454555.2 ENST00000596398.6 ENST00000598478.2 ENST00000599179.2 ENST00000599264.2 ENST00000601607.6 ENST00000608426.2 ENST00000653082.1 ENST00000653178.1 ENST00000653504.1 ENST00000653600.1 ENST00000654086.1 ENST00000654132.1 ENST00000654352.1 ENST00000654904.1 ENST00000654919.1 ENST00000655062.1 ENST00000655173.1 ENST00000655201.1 ENST00000655206.1 ENST00000655448.1 ENST00000655625.1 ENST00000655741.1 ENST00000656267.1 ENST00000656290.1 ENST00000656479.1 ENST00000656539.1 ENST00000656615.1 ENST00000656646.1 ENST00000656920.1 ENST00000657324.1 ENST00000657599.1 ENST00000657690.1 ENST00000658024.1 ENST00000658095.1 ENST00000658169.1 ENST00000658308.1 ENST00000658692.1 ENST00000658711.1 ENST00000659016.1 ENST00000659165.1 ENST00000659258.1 ENST00000659496.1 ENST00000659909.1 ENST00000660236.1 ENST00000660294.1 ENST00000660560.1 ENST00000660821.1 ENST00000660976.1 ENST00000661079.1 ENST00000661301.1 ENST00000661782.1 ENST00000661817.1 ENST00000661872.1 ENST00000661976.1 ENST00000662500.1 ENST00000663045.1 ENST00000663194.1 ENST00000663287.1 ENST00000663594.1 ENST00000663744.1 ENST00000663761.1 ENST00000663969.1 ENST00000664090.1 ENST00000664140.1 ENST00000664201.1 ENST00000664522.1 ENST00000664695.1 ENST00000664796.1 ENST00000665309.1 ENST00000665747.1 ENST00000666040.1 ENST00000666322.1 ENST00000666696.1 ENST00000666948.1 ENST00000667106.1 ENST00000667217.1 ENST00000667429.1 ENST00000667492.1 ENST00000667582.1 ENST00000667685.1 ENST00000667987.1 ENST00000668080.1 ENST00000668272.1 ENST00000668279.1 ENST00000668362.1 ENST00000668396.1 ENST00000668581.1 ENST00000668939.1 ENST00000669035.1 ENST00000669144.1 ENST00000669264.1 ENST00000669497.1 ENST00000669507.1 ENST00000669540.1 ENST00000669655.1 ENST00000669675.1 ENST00000669706.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670114.1 ENST00000670303.1 ENST00000670308.1 ENST00000670430.1 ENST00000670433.1 ENST00000670530.1 ENST00000670546.1 ENST00000670555.1 ENST00000670771.1 ENST00000670821.1 ENST00000670977.1 ENST00000671026.1 ENST00000671053.1 ENST00000671060.1 ENST00000671402.1 ENST00000671516.1 ENST00000671561.1 |
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| CDS TCA 72 bp | CGACTGCATATGTTAAGTGTATCTCCCTTGCGTAGTTaGATGGTGTGGGAGTGCACTGTTAAACCATCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLHMLSVSPLRS*MVWECTVKPSG Trigger: ACCAGATGGTTTAACAGTGCACTCCCACACCATTCAACTACGCAAGGGAGATACACTTAACATATGCAGTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 120 transcripts: ENST00000415294.3 ENST00000454555.2 ENST00000596398.6 ENST00000598478.2 ENST00000599179.2 ENST00000599264.2 ENST00000601607.6 ENST00000608426.2 ENST00000653082.1 ENST00000653178.1 ENST00000653504.1 ENST00000653600.1 ENST00000654086.1 ENST00000654132.1 ENST00000654352.1 ENST00000654904.1 ENST00000654919.1 ENST00000655062.1 ENST00000655173.1 ENST00000655201.1 ENST00000655206.1 ENST00000655448.1 ENST00000655625.1 ENST00000655741.1 ENST00000656267.1 ENST00000656290.1 ENST00000656479.1 ENST00000656539.1 ENST00000656615.1 ENST00000656646.1 ENST00000656920.1 ENST00000657324.1 ENST00000657599.1 ENST00000657690.1 ENST00000658024.1 ENST00000658095.1 ENST00000658169.1 ENST00000658308.1 ENST00000658692.1 ENST00000658711.1 ENST00000659016.1 ENST00000659165.1 ENST00000659258.1 ENST00000659496.1 ENST00000659909.1 ENST00000660236.1 ENST00000660294.1 ENST00000660560.1 ENST00000660821.1 ENST00000660976.1 ENST00000661079.1 ENST00000661301.1 ENST00000661782.1 ENST00000661817.1 ENST00000661872.1 ENST00000661976.1 ENST00000662500.1 ENST00000663045.1 ENST00000663194.1 ENST00000663287.1 ENST00000663594.1 ENST00000663744.1 ENST00000663761.1 ENST00000663969.1 ENST00000664090.1 ENST00000664140.1 ENST00000664201.1 ENST00000664522.1 ENST00000664695.1 ENST00000664796.1 ENST00000665309.1 ENST00000665747.1 ENST00000666040.1 ENST00000666322.1 ENST00000666696.1 ENST00000666948.1 ENST00000667106.1 ENST00000667217.1 ENST00000667429.1 ENST00000667492.1 ENST00000667582.1 ENST00000667685.1 ENST00000667987.1 ENST00000668080.1 ENST00000668272.1 ENST00000668279.1 ENST00000668362.1 ENST00000668396.1 ENST00000668581.1 ENST00000668939.1 ENST00000669035.1 ENST00000669144.1 ENST00000669264.1 ENST00000669497.1 ENST00000669507.1 ENST00000669540.1 ENST00000669655.1 ENST00000669675.1 ENST00000669706.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670114.1 ENST00000670303.1 ENST00000670308.1 ENST00000670430.1 ENST00000670433.1 ENST00000670530.1 ENST00000670546.1 ENST00000670555.1 ENST00000670771.1 ENST00000670821.1 ENST00000670977.1 ENST00000671026.1 ENST00000671053.1 ENST00000671060.1 ENST00000671402.1 ENST00000671516.1 ENST00000671561.1 |
||
| CDS TCA 72 bp | AATGGCATCCCATGGGTCCTCGGCAAAGCACAGAAATaGATTTCAGATACCTGCCATAATTCTTCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NGIPWVLGKAQK*ISDTCHNSSAA Trigger: AGCAGCAGAAGAATTATGGCAGGTATCTGAAATTCATTTCTGTGCTTTGCCGAGGACCCATGGGATGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000599264.2 ENST00000653082.1 ENST00000655625.1 ENST00000655741.1 ENST00000657324.1 ENST00000659016.1 ENST00000661301.1 ENST00000661782.1 ENST00000661817.1 ENST00000663594.1 ENST00000663744.1 ENST00000664090.1 ENST00000664522.1 ENST00000666696.1 ENST00000667685.1 ENST00000668581.1 ENST00000668939.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670308.1 |
||
| CDS TCA 72 bp | CTCTCAGTTGGTGCCTGGAAGGTAGAAGGCACTCCATaGGCGTTGGCCATTCTTATTATTGCAAGAATAACT | + |
|
Preference number: 6 (lower is better) Translates to: LSVGAWKVEGTP*ALAILIIARIT Trigger: AGTTATTCTTGCAATAATAAGAATGGCCAACGCTCATGGAGTGCCTTCTACCTTCCAGGCACCAACTGAGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654132.1 |
||
| CDS TCA 72 bp | AGGCACCATATTTGTCTTGTGGCAGATGTTAGCCTCTaGTTGGGCAGAATATCTCAAGGTTTTGCTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RHHICLVADVSL*LGRISQGFACT Trigger: GGTGCAAGCAAAACCTTGAGATATTCTGCCCAATCAGAGGCTAACATCTGCCACAAGACAAATATGGTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655173.1 ENST00000655201.1 ENST00000664140.1 |
||
| CDS TCA 72 bp | TGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATCGCCACACTGACTTCCACAATGGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WLGQMVFLVLDP*GIATLTSTMVE Trigger: TTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658151.1 ENST00000667582.1 ENST00000670429.1 |
||
| CDS GCA 72 bp | ACAGCCAAGGGTACTTCATTCTTGGAGTTGAGTCTTTaGATTTCATCCTCCAGAGTGAGAATAGACTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: TAKGTSFLELSL*ISSSRVRIDCV Trigger: CACGCAGTCTATTCTCACTCTGGAGGATGAAATGCAAAGACTCAACTCCAAGAATGAAGTACCCTTGGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
||
| CDS GCA 72 bp | GGTACCACTATTGGGCTGCTAAGCAGTGCTAAGCATTaGCTTCAGATGAGTTATCTAGCCTTTGTAAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GTTIGLLSSAKH*LQMSYLAFVKL Trigger: GAGCTTTACAAAGGCTAGATAACTCATCTGAAGGCAATGCTTAGCACTGCTTAGCAGCCCAATAGTGGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663594.1 |
||
| CDS GCA 72 bp | GTGTGGTTTGAGGAAGCTGACACCATCTCAAGGTTTTaGTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VWFEEADTISRF*LHLVAVLIPFA Trigger: TGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGATGGTGTCAGCTTCCTCAAACCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
||
| CDS CCA 72 bp | GCCTTACAGGAACTGAAAGGACCCACGTGGAACAGCTaGCAACTGAAACTCATCTTGTCAATTTCAAGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ALQELKGPTWNS*QLKLILSISSV Trigger: TACACTTGAAATTGACAAGATGAGTTTCAGTTGCCAGCTGTTCCACGTGGGTCCTTTCAGTTCCTGTAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599179.2 |
||
| CDS CAA 72 bp | CACAGCCAAGGGTACTTCATTCTTGGAGTTGAGTCTTaGCATTTCATCCTCCAGAGTGAGAATAGACTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: HSQGYFILGVES*HFILQSENRLR Trigger: ACGCAGTCTATTCTCACTCTGGAGGATGAAATGCAAAGACTCAACTCCAAGAATGAAGTACCCTTGGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
||
| CDS CAA 72 bp | AAGGGGAAGCAACCACATCCTTCTTCACTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KGKQPHPSSLKV*LAPCGSSNSFC Trigger: GCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTGAAGAAGGATGTGGTTGCTTCCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000599179.2 ENST00000670429.1 |
||
| CDS CAA 72 bp | GAGAATGCTGGATACACTGGAGAGGGAATTCCAAGATaGAAATTCTCTGAGATGGGCAGAAAGGGGACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ENAGYTGEGIPR*KFSEMGRKGTE Trigger: TTCAGTCCCCTTTCTGCCCATCTCAGAGAATTTCAATCTTGGAATTCCCTCTCCAGTGTATCCAGCATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667534.1 ENST00000669840.1 |
||
| CDS CAA 72 bp | TTTGAGGAAGCTGACACCATTGCTCATTCAGCCCTGTaGGCTGCAGACTCTAAGTGTCTCTTAAATCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: FEEADTIAHSAL*AADSKCLLNLS Trigger: GGATAGATTTAAGAGACACTTAGAGTCTGCAGCCAACAGGGCTGAATGAGCAATGGTGTCAGCTTCCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670430.1 ENST00000671026.1 |
||
| CDS CAA 72 bp | CACTCCACCCAGTCAGATGGACGGAACAAATTAATCTaGGTATCATCATCCAGACTATTTGCCCATCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: HSTQSDGRNKLI*VSSSRLFAHHR Trigger: CCTGTGATGGGCAAATAGTCTGGATGATGATACCAAGATTAATTTGTTCCGTCCATCTGACTGGGTGGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666723.1 |
||
| CDS TCA 72 bp | ACATTCTTACTGTGGCCTCATGTGGCAGAGGAAGAATaGAAACCTGTGGTGTGTTTTTCTTACAAGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: TFLLWPHVAEEE*KPVVCFSYKGT Trigger: TGTGCCCTTGTAAGAAAAACACACCACAGGTTTTCATTCTTCCTCTGCCACATGAGGCCACAGTAAGAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000454555.2 ENST00000655062.1 ENST00000656290.1 ENST00000656615.1 ENST00000657599.1 ENST00000658024.1 ENST00000658095.1 ENST00000658692.1 ENST00000659258.1 ENST00000662776.1 ENST00000664201.1 ENST00000664695.1 ENST00000666696.1 ENST00000667106.1 ENST00000668396.1 ENST00000668581.1 ENST00000669264.1 ENST00000669675.1 ENST00000670430.1 ENST00000670530.1 |
||
| CDS TCA 72 bp | TCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTaGACTAGTTTACAGTACCACCAACAGTGTAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLRNRHTDFHNG*TSLQYHQQCKS Trigger: ACTTTTACACTGTTGGTGGTACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658151.1 ENST00000667582.1 ENST00000670429.1 |
||
| CDS GCA 72 bp | AGTTCACCCCATGTGCATTTAAGAGGGTTCAAGACTTaGCTTCCTCCAATTTACAGACATCCACAGAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSPHVHLRGFKT*LPPIYRHPQRN Trigger: GTTTCTCTGTGGATGTCTGTAAATTGGAGGAAGGCAAGTCTTGAACCCTCTTAAATGCACATGGGGTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608624.6 |
||
| CDS CCA 72 bp | TGTGGCCTCATGTGGCAGAGGAAGAATGAAAACCTGTaGTGTGTTTTTCTTACAAGGGCACAAATTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: CGLMWQRKNENL*CVFLTRAQISP Trigger: TGGTGAAATTTGTGCCCTTGTAAGAAAAACACACCACAGGTTTTCATTCTTCCTCTGCCACATGAGGCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 20 transcripts: ENST00000454555.2 ENST00000655062.1 ENST00000656290.1 ENST00000656615.1 ENST00000657599.1 ENST00000658024.1 ENST00000658095.1 ENST00000658692.1 ENST00000659258.1 ENST00000662776.1 ENST00000664201.1 ENST00000664695.1 ENST00000666696.1 ENST00000667106.1 ENST00000668396.1 ENST00000668581.1 ENST00000669264.1 ENST00000669675.1 ENST00000670430.1 ENST00000670530.1 |
||
| CDS CCA 72 bp | TTTCATAATTGTAGTGCTCCCATTCCCCAGAGTGAGTaGTTTAAGATCCACAGCAGAGGTTCTGTTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FHNCSAPIPQSE*FKIHSRGSVPS Trigger: ACTTGGAACAGAACCTCTGCTGTGGATCTTAAACCACTCACTCTGGGGAATGGGAGCACTACAATTATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667534.1 |
||
| CDS CAA 72 bp | TCGCAACAATCACAAGAGATGATTTTCTTGGATGGCTaGGCATCTGCACATTCTGCTGATCTTCCACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQQSQEMIFLDG*ASAHSADLPLP Trigger: AGGAAGTGGAAGATCAGCAGAATGTGCAGATGCCAAGCCATCCAAGAAAATCATCTCTTGTGATTGTTGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 27 transcripts: ENST00000415294.3 ENST00000598229.2 ENST00000655206.1 ENST00000656539.1 ENST00000658308.1 ENST00000659909.1 ENST00000660294.1 ENST00000660560.1 ENST00000660976.1 ENST00000661301.1 ENST00000661782.1 ENST00000662500.1 ENST00000663045.1 ENST00000663194.1 ENST00000663969.1 ENST00000667987.1 ENST00000668272.1 ENST00000668279.1 ENST00000668966.1 ENST00000669497.1 ENST00000669655.1 ENST00000670303.1 ENST00000670546.1 ENST00000670771.1 ENST00000670821.1 ENST00000671026.1 ENST00000671060.1 |
||
| CDS CAA 72 bp | GGAAGCAACCACATCCTTCTTCACTCAAGGTTTTGCTaGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GSNHILLHSRFC*HLVAVLIPFAS Trigger: AGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTGAAGAAGGATGTGGTTGCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000599179.2 ENST00000670429.1 |
||
| CDS CAA 72 bp | GAGTTCACCCCATGTGCATTTAAGAGGGTTCAAGACTaGCCTTCCTCCAATTTACAGACATCCACAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EFTPCAFKRVQD*PSSNLQTSTEK Trigger: TTTCTCTGTGGATGTCTGTAAATTGGAGGAAGGCAAGTCTTGAACCCTCTTAAATGCACATGGGGTGAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608624.6 |
||
| CDS CAA 72 bp | TGTCTTGTGGCAGATGTTAGCCTCTCAAGGTTTTGCTaGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: CLVADVSLSRFC*HLVAVLIPFAS Trigger: AGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAGGCTAACATCTGCCACAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661976.1 ENST00000663287.1 ENST00000667429.1 |
||
| CDS CAA 72 bp | TGGTTTGAGGAAGCTGACACCATCTCAAGGTTTTGCTaGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: WFEEADTISRFC*HLVAVLIPFAS Trigger: AGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGATGGTGTCAGCTTCCTCAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000663045.1 ENST00000667987.1 ENST00000669497.1 ENST00000669655.1 ENST00000669675.1 |
||
| CDS CAA 72 bp | CATGGAAGCCTATGTAACAGACAGAGAAGTGGAGGTTaGAGACTGGCTACGCTTTTTGCACCTAGTTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: HGSLCNRQRSGG*RLATLFAPSSY Trigger: ATATGAACTAGGTGCAAAAAGCGTAGCCAGTCTCAAACCTCCACTTCTCTGTCTGTTACATAGGCTTCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669840.1 |
||
| CDS CAA 90 bp | CCTCAACGGTGTCCAAATTCGATTTTCTCACCTGTGCTTCTCCTTTaGAAGTGTTCACTCCGTGGGATACTTGTTGACATTTTCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: PQRCPNSIFSPVLLL*KCSLRGILVDIFSI Trigger: AATGGAGAAAATGTCAACAAGTATCCCACGGAGTGAACACTTCAAAAGGAGAAGCACAGGTGAGAAAATCGAATTTGGACACCGTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 37 transcripts: ENST00000414368.2 ENST00000598478.2 ENST00000608220.6 ENST00000654919.1 ENST00000655062.1 ENST00000655173.1 ENST00000655201.1 ENST00000655448.1 ENST00000656267.1 ENST00000656479.1 ENST00000656646.1 ENST00000656920.1 ENST00000657324.1 ENST00000658169.1 ENST00000658711.1 ENST00000659165.1 ENST00000660236.1 ENST00000660821.1 ENST00000661079.1 ENST00000661817.1 ENST00000661976.1 ENST00000663194.1 ENST00000663287.1 ENST00000664140.1 ENST00000665747.1 ENST00000666948.1 ENST00000667217.1 ENST00000667429.1 ENST00000668080.1 ENST00000669035.1 ENST00000669144.1 ENST00000669507.1 ENST00000669706.1 ENST00000669887.1 ENST00000670308.1 ENST00000670433.1 ENST00000671516.1 |
||
| CDS CAA 90 bp | GCACATATGCACTCCACCCAGTCAGATGGACGGAACAAATTAATCTaGGTATCATCATCCAGACTATTTGCCCATCACAGGTTTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AHMHSTQSDGRNKLI*VSSSRLFAHHRFSL Trigger: AAGAGAAAACCTGTGATGGGCAAATAGTCTGGATGATGATACCAAGATTAATTTGTTCCGTCCATCTGACTGGGTGGAGTGCATATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666723.1 |
||
| CDS CAA 90 bp | ACTTCTAAGATGCCAATAGTCATTCCATTGACACAGCTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSKMPIVIPLTQLKV*LAPCGSSNSFCISW Trigger: CCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGCTGTGTCAATGGAATGACTATTGGCATCTTAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667534.1 |
||
| CDS TCA 72 bp | ATTACCATCTTTGGGAGTATTGCTAGCAGGATTGAGTaGGTTAATATGTGTGAAGCTCTCAGTTGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ITIFGSIASRIE*VNMCEALSWCL Trigger: CAGGCACCAACTGAGAGCTTCACACATATTAACTCACTCAATCCTGCTAGCAATACTCCCAAAGATGGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654132.1 |
||
| CDS TCA 72 bp | AGATCCACAGCAGAGGTTCTGTTCCAAGTAAGTCTCTaGAGAATCAGGCTGATAGGAGATCTTTCATCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RSTAEVLFQVSL*RIRLIGDLSSL Trigger: TAGAGATGAAAGATCTCCTATCAGCCTGATTCTTCAGAGACTTACTTGGAACAGAACCTCTGCTGTGGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000660560.1 ENST00000660976.1 ENST00000667534.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
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| CDS TCA 72 bp | ACACTTTATTTATATAACCAGGCAGTGGGCCAGATTTaGCCCTCTACGCATAGTTCATGGACCCCTGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TLYLYNQAVGQI*PSTHSSWTPVL Trigger: TAAAACAGGGGTCCATGAACTATGCGTAGAGGGTCAAATCTGGCCCACTGCCTGGTTATATAAATAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000659496.1 ENST00000661079.1 ENST00000661782.1 ENST00000670771.1 |
||
| CDS TCA 72 bp | AAAATGCAGCGTAACATTTATTGCCATCCCTGGAACTaGTTCGGTGCACACTACCACTCAACAGAAGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: KMQRNIYCHPWN*FGAHYHSTEEF Trigger: AAACTCTTCTGTTGAGTGGTAGTGTGCACCGAATCAGTTCCAGGGATGGCAATAAATGTTACGCTGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661872.1 ENST00000667492.1 |
||
| CDS TCA 72 bp | ATGGAAGCCTATGTAACAGACAGAGAAGTGGAGGTTTaGGACTGGCTACGCTTTTTGCACCTAGTTCATATT | + |
|
Preference number: 6 (lower is better) Translates to: MEAYVTDREVEV*DWLRFLHLVHI Trigger: AATATGAACTAGGTGCAAAAAGCGTAGCCAGTCTCAAACCTCCACTTCTCTGTCTGTTACATAGGCTTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669840.1 |
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| CDS GCA 72 bp | ATGCAGCTGTTAAAAACATCATCACCATGGCTGGAATaGTGTGTTCAAATACTGCCTGTGCAACTGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: MQLLKTSSPWLE*CVQILPVQLRC Trigger: ACATCTCAGTTGCACAGGCAGTATTTGAACACAGCATTCCAGCCATGGTGATGATGTTTTTAACAGCTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414368.2 ENST00000666723.1 |
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| CDS GCA 72 bp | AGTCTTTGCATTTCATCCTCCAGAGTGAGAATAGACTaGGTGTTGGAGAGGTCAGGGAAATTATGTCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLCISSSRVRID*VLERSGKLCLS Trigger: AGAAAGACATAATTTCCCTGACCTCTCCAACACGCAGTCTATTCTCACTCTGGAGGATGAAATGCAAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
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| CDS GCA 72 bp | CATATTTGTCTTGTGGCAGATGTTAGCCTCCCAGACTaGTTTATAGAGGATGTAATCCATTGTGACGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: HICLVADVSLPD*FIEDVIHCDAT Trigger: AGTAGCGTCACAATGGATTACATCCTCTATAAAGCAGTCTGGGAGGCTAACATCTGCCACAAGACAAATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000598478.2 ENST00000608220.6 ENST00000655448.1 ENST00000656646.1 ENST00000658711.1 ENST00000660236.1 ENST00000661817.1 ENST00000667217.1 ENST00000669144.1 ENST00000669507.1 ENST00000670308.1 ENST00000670433.1 |
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| CDS GCA 72 bp | TCAACGGTGTCCAAATTCGATTTTCTCACCCCAGACTaGTTTATAGAGGATGTAATCCATTGTGACGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: STVSKFDFLTPD*FIEDVIHCDAT Trigger: AGTAGCGTCACAATGGATTACATCCTCTATAAAGCAGTCTGGGGTGAGAAAATCGAATTTGGACACCGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 27 transcripts: ENST00000608624.6 ENST00000653082.1 ENST00000653178.1 ENST00000654086.1 ENST00000654132.1 ENST00000654352.1 ENST00000654904.1 ENST00000655206.1 ENST00000655741.1 ENST00000658024.1 ENST00000659496.1 ENST00000662776.1 ENST00000663761.1 ENST00000663969.1 ENST00000664201.1 ENST00000664522.1 ENST00000666322.1 ENST00000667492.1 ENST00000668362.1 ENST00000669886.1 ENST00000669959.1 ENST00000670546.1 ENST00000670555.1 ENST00000671026.1 ENST00000671060.1 ENST00000671402.1 ENST00000671561.1 |
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| CDS GCA 72 bp | ATTTGTCTTGTGGCAGATGTTAGCCTCTCAAGGTTTTaGTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ICLVADVSLSRF*LHLVAVLIPFA Trigger: TGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGAGGCTAACATCTGCCACAAGACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661976.1 ENST00000663287.1 ENST00000667429.1 |
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| CDS GCA 72 bp | GATAGAAGACATAGTAGAGTGGAGTTATCCATTGACTaGAGGTTGATTGATGGAAAAGTGGCAAGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DRRHSRVELSID*RLIDGKVARRK Trigger: CTTCCTCCTTGCCACTTTTCCATCAATCAACCTGCAGTCAATGGATAACTCCACTCTACTATGTCTTCTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667534.1 ENST00000669840.1 |
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| CDS CCA 72 bp | ACCATATTTGTCTTGTGGCAGATGTTAGCCTCTGATTaGGCAGAATATCCCAGACTGCTTTATAGAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: TIFVLWQMLASD*AEYPRLLYRGC Trigger: ACATCCTCTATAAAGCAGTCTGGGATATTCTGCCCAATCAGAGGCTAACATCTGCCACAAGACAAATATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000654919.1 ENST00000655062.1 ENST00000656267.1 ENST00000656479.1 ENST00000656920.1 ENST00000657324.1 ENST00000658169.1 ENST00000659165.1 ENST00000661079.1 ENST00000663194.1 ENST00000665747.1 ENST00000666948.1 ENST00000668080.1 ENST00000669035.1 ENST00000669706.1 ENST00000669887.1 |
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| CDS CCA 72 bp | GTTGCTTTCCTGATGGGGCAAGCAGAACAGTACAATTaGTACAATGTACATCAAGTGTGGGCTTTTCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VAFLMGQAEQYN*YNVHQVWAFLN Trigger: ATTGAGAAAAGCCCACACTTGATGTACATTGTACCAATTGTACTGTTCTGCTTGCCCCATCAGGAAAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS CCA 72 bp | CTGTATTTGCATACTAGGCCAACTCTTTGGTATCCTTaGTGGGTCTTTTCTTATCCTCTTGGTCCTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LYLHTRPTLWYP*WVFSYPLGPSF Trigger: AAAGGAAGGACCAAGAGGATAAGAAAAGACCCACCAAGGATACCAAAGAGTTGGCCTAGTATGCAAATACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669840.1 |
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| CDS CCA 72 bp | TTCTCAAAGTTCAACAGATTTTTAGTTTTGCAGGACTaGGGAGGCCTCAGGGAACTTACAATCATGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FSKFNRFLVLQD*GGLRELTIMAE Trigger: TTCTGCCATGATTGTAAGTTCCCTGAGGCCTCCCCAGTCCTGCAAAACTAAAAATCTGTTGAACTTTGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667582.1 |
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| CDS CAA 72 bp | TGCATTTCATCCTCCAGAGTGAGAATAGACTGCGTGTaGGAGAGGTCAGGGAAATTATGTCTTTCTATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CISSSRVRIDCV*ERSGKLCLSMS Trigger: AGACATAGAAAGACATAATTTCCCTGACCTCTCCAACACGCAGTCTATTCTCACTCTGGAGGATGAAATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
||
| CDS CAA 72 bp | AGTTGCTTTCCTGATGGGGCAAGCAGAACAGTACAATaGGTACAATGTACATCAAGTGTGGGCTTTTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SCFPDGASRTVQ*VQCTSSVGFSQ Trigger: TTGAGAAAAGCCCACACTTGATGTACATTGTACCAATTGTACTGTTCTGCTTGCCCCATCAGGAAAGCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS CAA 72 bp | ATGCCAATAGTCATTCCATTGACACAGCTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: MPIVIPLTQLKV*LAPCGSSNSFC Trigger: GCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGCTGTGTCAATGGAATGACTATTGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667534.1 |
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| CDS CAA 72 bp | TCATCTCTAACTTCTAAGATGCCAATAGTCATTCCATaGACACAGCTCAAGGTTTTGCTTGCACCTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLTSKMPIVIP*TQLKVLLAPCG Trigger: GCCACAAGGTGCAAGCAAAACCTTGAGCTGTGTCAATGGAATGACTATTGGCATCTTAGAAGTTAGAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667534.1 |
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| CDS CAA 90 bp | TGCCAAATAGTGAAAATACTTCACCATCAATGGAGACTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CQIVKILHHQWRLKV*LAPCGSSNSFCISW Trigger: CCAGGAGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTCTCCATTGATGGTGAAGTATTTTCACTATTTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000454555.2 ENST00000654086.1 ENST00000654904.1 ENST00000655062.1 ENST00000655448.1 ENST00000656615.1 ENST00000658169.1 ENST00000661817.1 ENST00000663744.1 ENST00000664090.1 ENST00000664796.1 ENST00000665309.1 ENST00000666322.1 ENST00000666948.1 ENST00000667217.1 ENST00000668939.1 ENST00000669540.1 ENST00000671516.1 |
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| CDS CAA 90 bp | TTGAGTCTTTGCATTTCATCCTCCAGAGTGAGAATAGACTGCGTGTaGGAGAGGTCAGGGAAATTATGTCTTTCTATGTCTAGCCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LSLCISSSRVRIDCV*ERSGKLCLSMSSPL Trigger: TAAAGGGCTAGACATAGAAAGACATAATTTCCCTGACCTCTCCAACACGCAGTCTATTCTCACTCTGGAGGATGAAATGCAAAGACTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
||
| CDS CAA 90 bp | AATGAGATTGAGTTCACCCCATGTGCATTTAAGAGGGTTCAAGACTaGCCTTCCTCCAATTTACAGACATCCACAGAGAAACCATTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: NEIEFTPCAFKRVQD*PSSNLQTSTEKPLS Trigger: GCTTAATGGTTTCTCTGTGGATGTCTGTAAATTGGAGGAAGGCAAGTCTTGAACCCTCTTAAATGCACATGGGGTGAACTCAATCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608624.6 |
||
| CDS CAA 90 bp | AGGCAGGACACGTCTTCCAAGGTATATTCACTCTTGAGTATCAGGTaGGATGTTTTACTCGCAAATGTTTATAAACCTGCTACTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: RQDTSSKVYSLLSIR*DVLLANVYKPATAC Trigger: GCATGCAGTAGCAGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGAGTGAATATACCTTGGAAGACGTGTCCTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655448.1 |
||
| CDS TCA 72 bp | GTCCAAATTCGATTTTCTCACCTGTGCTTCTCCTTTTaGAGTGTTCACTCCGTGGGATACTTGTTGACATTT | + |
|
Preference number: 6 (lower is better) Translates to: VQIRFSHLCFSF*SVHSVGYLLTF Trigger: AAATGTCAACAAGTATCCCACGGAGTGAACACTTCAAAAGGAGAAGCACAGGTGAGAAAATCGAATTTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 37 transcripts: ENST00000414368.2 ENST00000598478.2 ENST00000608220.6 ENST00000654919.1 ENST00000655062.1 ENST00000655173.1 ENST00000655201.1 ENST00000655448.1 ENST00000656267.1 ENST00000656479.1 ENST00000656646.1 ENST00000656920.1 ENST00000657324.1 ENST00000658169.1 ENST00000658711.1 ENST00000659165.1 ENST00000660236.1 ENST00000660821.1 ENST00000661079.1 ENST00000661817.1 ENST00000661976.1 ENST00000663194.1 ENST00000663287.1 ENST00000664140.1 ENST00000665747.1 ENST00000666948.1 ENST00000667217.1 ENST00000667429.1 ENST00000668080.1 ENST00000669035.1 ENST00000669144.1 ENST00000669507.1 ENST00000669706.1 ENST00000669887.1 ENST00000670308.1 ENST00000670433.1 ENST00000671516.1 |
||
| CDS CCA 72 bp | AAGACATGCCAAATAGTGAAAATACTTCACCATCAATaGAGACTCAAGGTTTTGCTTGCACCTTGTGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KTCQIVKILHHQ*RLKVLLAPCGS Trigger: ACTGCCACAAGGTGCAAGCAAAACCTTGAGTCTCCATTGATGGTGAAGTATTTTCACTATTTGGCATGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000454555.2 ENST00000654086.1 ENST00000654904.1 ENST00000655062.1 ENST00000655448.1 ENST00000656615.1 ENST00000658169.1 ENST00000661817.1 ENST00000663744.1 ENST00000664090.1 ENST00000664796.1 ENST00000665309.1 ENST00000666322.1 ENST00000666948.1 ENST00000667217.1 ENST00000668939.1 ENST00000669540.1 ENST00000671516.1 |
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| CDS CCA 72 bp | AAGATAAAGCTATTCTTTAGTTTTCTCATCTGCAAATaGCATCCCATGGGTCCTCGGCAAAGCACAGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: KIKLFFSFLICK*HPMGPRQSTEM Trigger: CATTTCTGTGCTTTGCCGAGGACCCATGGGATGCCATTTGCAGATGAGAAAACTAAAGAATAGCTTTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 22 transcripts: ENST00000599264.2 ENST00000653082.1 ENST00000655625.1 ENST00000655741.1 ENST00000657324.1 ENST00000659016.1 ENST00000661301.1 ENST00000661782.1 ENST00000661817.1 ENST00000663594.1 ENST00000663744.1 ENST00000664090.1 ENST00000664522.1 ENST00000666696.1 ENST00000667685.1 ENST00000668581.1 ENST00000668939.1 ENST00000669807.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670308.1 |
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| CDS CCA 72 bp | TATTTGCATACTAGGCCAACTCTTTGGTATCCTTGGTaGGTCTTTTCTTATCCTCTTGGTCCTTCCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: YLHTRPTLWYPW*VFSYPLGPSFS Trigger: AGAAAAGGAAGGACCAAGAGGATAAGAAAAGACCCACCAAGGATACCAAAGAGTTGGCCTAGTATGCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669840.1 |
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| CDS CAA 72 bp | GTGAAAATACTTCACCATCAATGGAGACTCAAGGTTTaGCTTGCACCTTGTGGCAGTTCTAATTCCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VKILHHQWRLKV*LAPCGSSNSFC Trigger: GCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTCTCCATTGATGGTGAAGTATTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000454555.2 ENST00000654086.1 ENST00000654904.1 ENST00000655062.1 ENST00000655448.1 ENST00000656615.1 ENST00000658169.1 ENST00000661817.1 ENST00000663744.1 ENST00000664090.1 ENST00000664796.1 ENST00000665309.1 ENST00000666322.1 ENST00000666948.1 ENST00000667217.1 ENST00000668939.1 ENST00000669540.1 ENST00000671516.1 |
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| CDS CAA 72 bp | TGCATGTGTCTTTATAGCAGCATGACTTATAATCCTTaGGGTATATACCCAGTAATGGGATGGCTGGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CMCLYSSMTYNP*GIYPVMGWLGQ Trigger: TTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAGTCATGCTGCTATAAAGACACATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658151.1 ENST00000667582.1 ENST00000670429.1 |
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| CDS CAA 72 bp | GTCTCCTCAACGGTGTCCAAATTCGATTTTCTCACCTaGAGTATCAGGTTGGATGTTTTACTCGCAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSSTVSKFDFLT*SIRLDVLLANV Trigger: AACATTTGCGAGTAAAACATCCAACCTGATACTCAAGGTGAGAAAATCGAATTTGGACACCGTTGAGGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664796.1 ENST00000669540.1 |
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| CDS CAA 72 bp | AGACATAGTAGAGTGGAGTTATCCATTGACTGCAGGTaGATTGATGGAAAAGTGGCAAGGAGGAAGAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: RHSRVELSIDCR*IDGKVARRKNQ Trigger: TTGATTCTTCCTCCTTGCCACTTTTCCATCAATCAACCTGCAGTCAATGGATAACTCCACTCTACTATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667534.1 ENST00000669840.1 |
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| CDS CAA 72 bp | AAACTTTTCCAATACACCTATGCTCATTCAGCCCTGTaGGCTGCAGACTCTAAGTGTCTCTTAAATCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: KLFQYTYAHSAL*AADSKCLLNLS Trigger: GGATAGATTTAAGAGACACTTAGAGTCTGCAGCCAACAGGGCTGAATGAGCATAGGTGTATTGGAAAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670114.1 |
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| CDS CAA 90 bp | GGAGATAGAAGACATAGTAGAGTGGAGTTATCCATTGACTGCAGGTaGATTGATGGAAAAGTGGCAAGGAGGAAGAATCAATTTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GDRRHSRVELSIDCR*IDGKVARRKNQFPK Trigger: TTTGGGAAATTGATTCTTCCTCCTTGCCACTTTTCCATCAATCAACCTGCAGTCAATGGATAACTCCACTCTACTATGTCTTCTATCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667534.1 ENST00000669840.1 |
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| CDS TCA 72 bp | GTCTTTCTATGTCTAGCCCTTTATAGGTCGATTATTTaGATGCTTGACAGCATCTGTCCACTTATCTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: VFLCLALYRSII*MLDSICPLIYP Trigger: GGGATAGATAAGTGGACAGATGCTGTCAAGCATTCAAATAATCGACCTATAAAGGGCTAGACATAGAAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596398.6 ENST00000671026.1 |
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| CDS TCA 72 bp | TCTCCTCAACGGTGTCCAAATTCGATTTTCTCACCTTaGGTATCAGGTTGGATGTTTTACTCGCAAATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPQRCPNSIFSP*VSGWMFYSQMF Trigger: AAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGGTGAGAAAATCGAATTTGGACACCGTTGAGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664796.1 ENST00000669540.1 |
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| CDS TCA 72 bp | CACATTCTTTGTAAAGGCATGGATTGCAAAAATCACTaGATTTGCTGTAATGCTAATCCCTGGGTCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: HILCKGMDCKNH*ICCNANPWVSC Trigger: GCATGAGACCCAGGGATTAGCATTACAGCAAATTCAGTGATTTTTGCAATCCATGCCTTTACAAAGAATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667492.1 |
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| CDS TCA 72 bp | CAGATCCTTGTGACAAACATTGTCAAAGCAATGACCTaGTCCAATTCAGCAACTTTCAGATGTACCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QILVTNIVKAMT*SNSATFRCTTK Trigger: CTTTGTGGTACATCTGAAAGTTGCTGAATTGGATCAGGTCATTGCTTTGACAATGTTTGTCACAAGGATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667534.1 ENST00000669840.1 |
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| CDS CCA 72 bp | ACTTATAATCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: TYNPLGIYPVMG*LGQMVFLVLDP Trigger: GGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658151.1 ENST00000667582.1 ENST00000670429.1 |
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| CDS CAA 72 bp | AAATACTTCACCATCAATGGAGACTCAAGGTTTTGCTaGCACCTTGTGGCAGTTCTAATTCCTTTTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: KYFTINGDSRFC*HLVAVLIPFAS Trigger: AGATGCAAAAGGAATTAGAACTGCCACAAGGTGCAAGCAAAACCTTGAGTCTCCATTGATGGTGAAGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000454555.2 ENST00000654086.1 ENST00000654904.1 ENST00000655062.1 ENST00000655448.1 ENST00000656615.1 ENST00000658169.1 ENST00000661817.1 ENST00000663744.1 ENST00000664090.1 ENST00000664796.1 ENST00000665309.1 ENST00000666322.1 ENST00000666948.1 ENST00000667217.1 ENST00000668939.1 ENST00000669540.1 ENST00000671516.1 |
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| CDS CAA 72 bp | AGCTGTTCAATTTTAGATGATCTTCTGAATCATAACTaGCTCATTCAGCCCTGTTGGCTGCAGACTCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCSILDDLLNHN*LIQPCWLQTLS Trigger: ACTTAGAGTCTGCAGCCAACAGGGCTGAATGAGCAAGTTATGATTCAGAAGATCATCTAAAATTGAACAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653082.1 ENST00000657690.1 |
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| CDS CAA 90 bp | ATGGGTGAAGGATTAGAAGAGGAAAAACAGAACTTGAGTATCAGGTaGGATGTTTTACTCGCAAATGTTTATAAACCTGCTACTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: MGEGLEEEKQNLSIR*DVLLANVYKPATAC Trigger: GCATGCAGTAGCAGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGTTCTGTTTTTCCTCTTCTAATCCTTCACCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454555.2 |
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| CDS CAA 90 bp | CTCATCCCCAAAGTGAAGACAAAAATATTACCATCTTTGGGAGTATaGCTAGCAGGATTGAGTGAGTTAATATGTGTGAAGCTCTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LIPKVKTKILPSLGV*LAGLSELICVKLSV Trigger: AACTGAGAGCTTCACACATATTAACTCACTCAATCCTGCTAGCAATACTCCCAAAGATGGTAATATTTTTGTCTTCACTTTGGGGATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS CAA 90 bp | TTCTCATCCAAAATGGGATGCAGATTGATTACCTTGAGTATCAGGTaGGATGTTTTACTCGCAAATGTTTATAAACCTGCTACTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSKMGCRLITLSIR*DVLLANVYKPATAC Trigger: GCATGCAGTAGCAGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGGTAATCAATCTGCATCCCATTTTGGATGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000654904.1 ENST00000656615.1 ENST00000661817.1 ENST00000663744.1 ENST00000664090.1 ENST00000665309.1 ENST00000666322.1 ENST00000666948.1 ENST00000668939.1 |
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| CDS CAA 90 bp | GCCGGGTATATCTTGCTCTTGGTCTTGTCCACAGGAAATTTATTTTaGCCTGACAGCCATCCATTTATAAAAAGTTGCTTTGTACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: AGYILLLVLSTGNLF*PDSHPFIKSCFVQT Trigger: AGTTTGTACAAAGCAACTTTTTATAAATGGATGGCTGTCAGGCAAAAATAAATTTCCTGTGGACAAGACCAAGAGCAAGATATACCCGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000659496.1 ENST00000661079.1 ENST00000670771.1 |
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| CDS CAA 90 bp | ACATATGTGTGCATGTGTCTTTATAGCAGCATGACTTATAATCCTTaGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: TYVCMCLYSSMTYNP*GIYPVMGWLGQMVF Trigger: AAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAGTCATGCTGCTATAAAGACACATGCACACATATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658151.1 ENST00000667582.1 ENST00000670429.1 |
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| CDS CAA 90 bp | ACTGCAATAGTCTCCTCAACGGTGTCCAAATTCGATTTTCTCACCTaGAGTATCAGGTTGGATGTTTTACTCGCAAATGTTTATAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: TAIVSSTVSKFDFLT*SIRLDVLLANVYKP Trigger: AGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGGTGAGAAAATCGAATTTGGACACCGTTGAGGAGACTATTGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664796.1 ENST00000669540.1 |
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| CDS GCA 72 bp | TTTGGCTCAGTGAAACTCTTTCTAACCATATACGCCTaGCTGTATCCTGGTCCTTGTATTTATTATTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FGSVKLFLTIYA*LYPGPCIYYCF Trigger: AAAGCAATAATAAATACAAGGACCAGGATACAGGCAGGCGTATATGGTTAGAAAGAGTTTCACTGAGCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667534.1 ENST00000669840.1 |
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| CDS CAA 90 bp | TTTCCTCTTGCCTTGCTCTTGGTCTTGTCCACAGGAAATTTATTTTaGCCTGACAGCCATCCATTTATAAAAAGTTGCTTTGTACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: FPLALLLVLSTGNLF*PDSHPFIKSCFVQT Trigger: AGTTTGTACAAAGCAACTTTTTATAAATGGATGGCTGTCAGGCAAAAATAAATTTCCTGTGGACAAGACCAAGAGCAAGGCAAGAGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 62 transcripts: ENST00000414368.2 ENST00000596398.6 ENST00000598478.2 ENST00000601607.6 ENST00000608220.6 ENST00000608426.2 ENST00000608624.6 ENST00000653082.1 ENST00000653178.1 ENST00000653504.1 ENST00000654086.1 ENST00000654132.1 ENST00000654352.1 ENST00000654904.1 ENST00000654919.1 ENST00000655173.1 ENST00000655201.1 ENST00000655448.1 ENST00000655741.1 ENST00000656267.1 ENST00000656479.1 ENST00000656646.1 ENST00000656920.1 ENST00000657324.1 ENST00000657690.1 ENST00000658169.1 ENST00000658711.1 ENST00000659165.1 ENST00000660236.1 ENST00000660821.1 ENST00000661817.1 ENST00000661872.1 ENST00000661976.1 ENST00000663287.1 ENST00000663761.1 ENST00000664140.1 ENST00000664522.1 ENST00000664796.1 ENST00000665747.1 ENST00000666040.1 ENST00000666322.1 ENST00000666723.1 ENST00000666948.1 ENST00000667217.1 ENST00000667429.1 ENST00000667492.1 ENST00000668362.1 ENST00000669035.1 ENST00000669144.1 ENST00000669507.1 ENST00000669540.1 ENST00000669706.1 ENST00000669886.1 ENST00000669887.1 ENST00000669959.1 ENST00000670308.1 ENST00000670433.1 ENST00000670555.1 ENST00000671053.1 ENST00000671402.1 ENST00000671516.1 ENST00000671561.1 |
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| CDS CAA 90 bp | TTCACTTTGCTCATCCCCAAAGTGAAGACAAAAATATTACCATCTTaGGGAGTATTGCTAGCAGGATTGAGTGAGTTAATATGTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FTLLIPKVKTKILPS*GVLLAGLSELICVK Trigger: CTTCACACATATTAACTCACTCAATCCTGCTAGCAATACTCCCAAAGATGGTAATATTTTTGTCTTCACTTTGGGGATGAGCAAAGTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS TCA 72 bp | ATATCCAAACATCAAGGTACTTTCAGACAACAACTCTaGGAGTCATTCCCCGAAAAATTACATGCAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISKHQGTFRQQL*ESFPEKLHAVK Trigger: TTTCACTGCATGTAATTTTTCGGGGAATGACTCTCAGAGTTGTTGTCTGAAAGTACCTTGATGTTTGGATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000599264.2 ENST00000663594.1 ENST00000669807.1 |
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| CDS TCA 72 bp | ATTGACACAGCTAATAGGACAGAATGTGGAAAATTATaGCTCGAAAGTATTTACTGTTTAGGGAGTCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IDTANRTECGKL*LESIYCLGSQA Trigger: AGCCTGACTCCCTAAACAGTAAATACTTTCGAGTCATAATTTTCCACATTCTGTCCTATTAGCTGTGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
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| CDS TCA 72 bp | ACAGAGCTAACACGTGACAAATCTAAGTGGGCTGACTaGCATAGAATGAGGAATCTATTAAATCTTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TELTRDKSKWAD*HRMRNLLNLQR Trigger: TCTTTGAAGATTTAATAGATTCCTCATTCTATGTCAGTCAGCCCACTTAGATTTGTCACGTGTTAGCTCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661872.1 ENST00000667492.1 |
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| CDS CAA 72 bp | AAAATATTACCATCTTTGGGAGTATTGCTAGCAGGATaGAGTGAGTTAATATGTGTGAAGCTCTCAGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: KILPSLGVLLAG*SELICVKLSVG Trigger: ACCAACTGAGAGCTTCACACATATTAACTCACTCAATCCTGCTAGCAATACTCCCAAAGATGGTAATATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS CAA 72 bp | CTCATCCCCAAAGTGAAGACAAAAATATTACCATCTTaGGGAGTATTGCTAGCAGGATTGAGTGAGTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: LIPKVKTKILPS*GVLLAGLSELI Trigger: TATTAACTCACTCAATCCTGCTAGCAATACTCCCAAAGATGGTAATATTTTTGTCTTCACTTTGGGGATGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS CAA 72 bp | TCAATTCTGTCTCCACCACTTATCCAGCATTTGACTTaGGTCAGGATACTAAATTTCTATGTCTTCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SILSPPLIQHLT*VRILNFYVFTL Trigger: CAAAGTGAAGACATAGAAATTTAGTATCCTGACCAAAGTCAAATGCTGGATAAGTGGTGGAGACAGAATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS CAA 72 bp | ACGTCTTCCAAGGTATATTCACTCTTGAGTATCAGGTaGGATGTTTTACTCGCAAATGTTTATAAACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSKVYSLLSIR*DVLLANVYKPA Trigger: AGCAGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGAGTGAATATACCTTGGAAGACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655448.1 |
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| CDS CAA 72 bp | GTGTCCAAATTCGATTTTCTCACCTTGAGTATCAGGTaGGATGTTTTACTCGCAAATGTTTATAAACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSKFDFLTLSIR*DVLLANVYKPA Trigger: AGCAGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGGTGAGAAAATCGAATTTGGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664796.1 ENST00000669540.1 |
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| CDS CAA 90 bp | ACTTTAGCTCAGATGGGTGAAGGATTAGAAGAGGAAAAACAGAACTaGAGTATCAGGTTGGATGTTTTACTCGCAAATGTTTATAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: TLAQMGEGLEEEKQN*SIRLDVLLANVYKP Trigger: AGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGTTCTGTTTTTCCTCTTCTAATCCTTCACCCATCTGAGCTAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454555.2 |
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| CDS CAA 90 bp | CAGCATTTGACTTTGGTCAGGATACTAAATTTCTATGTCTTCACTTaGCTCATCCCCAAAGTGAAGACAAAAATATTACCATCTTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QHLTLVRILNFYVFT*LIPKVKTKILPSLG Trigger: TCCCAAAGATGGTAATATTTTTGTCTTCACTTTGGGGATGAGCAAAGTGAAGACATAGAAATTTAGTATCCTGACCAAAGTCAAATGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654132.1 |
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| CDS CAA 90 bp | GGAGATCTTTCATCTCTAACTTCTAAGATGCCAATAGTCATTCCATaGACACAGCTAATAGGACAGAATGTGGAAAATTATGACTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GDLSSLTSKMPIVIP*TQLIGQNVENYDSK Trigger: TTTCGAGTCATAATTTTCCACATTCTGTCCTATTAGCTGTGTCAATGGAATGACTATTGGCATCTTAGAAGTTAGAGATGAAAGATCTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
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| CDS CAA 72 bp | GGATTAGAAGAGGAAAAACAGAACTTGAGTATCAGGTaGGATGTTTTACTCGCAAATGTTTATAAACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLEEEKQNLSIR*DVLLANVYKPA Trigger: AGCAGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGTTCTGTTTTTCCTCTTCTAATCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454555.2 |
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| CDS CAA 72 bp | AAAATGGGATGCAGATTGATTACCTTGAGTATCAGGTaGGATGTTTTACTCGCAAATGTTTATAAACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KMGCRLITLSIR*DVLLANVYKPA Trigger: AGCAGGTTTATAAACATTTGCGAGTAAAACATCCAACCTGATACTCAAGGTAATCAATCTGCATCCCATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000654904.1 ENST00000656615.1 ENST00000661817.1 ENST00000663744.1 ENST00000664090.1 ENST00000665309.1 ENST00000666322.1 ENST00000666948.1 ENST00000668939.1 |
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| CDS CAA 72 bp | ATATTCTCATCCAAAATGGGATGCAGATTGATTACCTaGAGTATCAGGTTGGATGTTTTACTCGCAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: IFSSKMGCRLIT*SIRLDVLLANV Trigger: AACATTTGCGAGTAAAACATCCAACCTGATACTCAAGGTAATCAATCTGCATCCCATTTTGGATGAGAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000654904.1 ENST00000656615.1 ENST00000661817.1 ENST00000663744.1 ENST00000664090.1 ENST00000665309.1 ENST00000666322.1 ENST00000666948.1 ENST00000668939.1 |
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| CDS CAA 72 bp | CACTATTTGATGAAAATAGCTTCCTATAAAAAGATTTaGGAGTTCCCACAAGTACAACTCAGTCAGAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: HYLMKIASYKKI*EFPQVQLSQNL Trigger: AAGGTTCTGACTGAGTTGTACTTGTGGGAACTCCAAAATCTTTTTATAGGAAGCTATTTTCATCAAATAGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000415294.3 ENST00000660294.1 ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
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| CDS CAA 72 bp | TCATCTCTAACTTCTAAGATGCCAATAGTCATTCCATaGACACAGCTAATAGGACAGAATGTGGAAAATTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSLTSKMPIVIP*TQLIGQNVENY Trigger: ATAATTTTCCACATTCTGTCCTATTAGCTGTGTCAATGGAATGACTATTGGCATCTTAGAAGTTAGAGATGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000660560.1 ENST00000660976.1 ENST00000668279.1 ENST00000670303.1 ENST00000671060.1 |
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