Pregenerated sensors for LINC00336 (Homo sapiens)
Ensembl gene IDs: ENSG00000197251Ensembl transcript IDs: ENST00000477984.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTGCCTGTGCGCACCGAAGTGCAGCAAACACGTCTCGGCCACGACTaGCAGGCCACCCCAGGCTCCAGCGGAGCGTGCGTACCTGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: VPVRTEVQQTRLGHD*QATPGSSGACVPAQ Trigger: CTGCGCAGGTACGCACGCTCCGCTGGAGCCTGGGGTGGCCTGGCAGTCGTGGCCGAGACGTGTTTGCTGCACTTCGGTGCGCACAGGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 90 bp | CTTTGTCTCCATCATCCGCAGGGTGGAGCGGGGCGGCCTGGGACCTaGAGTCCGGGAAGAGTCGAAGGCCTGTGGGCGGCCGAGGTCACG | + |
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Preference number: 5 (lower is better) Translates to: LCLHHPQGGAGRPGT*SPGRVEGLWAAEVT Trigger: CGTGACCTCGGCCGCCCACAGGCCTTCGACTCTTCCCGGACTCCAGGTCCCAGGCCGCCCCGCTCCACCCTGCGGATGATGGAGACAAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 90 bp | TGGGGGACTTTGTCTCCATCATCCGCAGGGTGGAGCGGGGCGGCCTaGGACCTGGAGTCCGGGAAGAGTCGAAGGCCTGTGGGCGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: WGTLSPSSAGWSGAA*DLESGKSRRPVGGR Trigger: TCGGCCGCCCACAGGCCTTCGACTCTTCCCGGACTCCAGGTCCCAGGCCGCCCCGCTCCACCCTGCGGATGATGGAGACAAAGTCCCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 90 bp | GGCGGAACCAAGAGGTTGGCACCGCAGTGCCTGTGCGCACCGAAGTaGAGCAAACACGTCTCGGCCACGACTGCCAGGCCACCCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: GGTKRLAPQCLCAPK*SKHVSATTARPPQA Trigger: AGCCTGGGGTGGCCTGGCAGTCGTGGCCGAGACGTGTTTGCTGCACTTCGGTGCGCACAGGCACTGCGGTGCCAACCTCTTGGTTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 90 bp | GTACGCTTGGCCCGTGCCAGACCACCAACCCCTTCCTGGAGAAGGTaGGGCTGGAGGCTTACCATCCCCTCCAGGCCCTGGGCCCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: VRLARARPPTPSWRR*GWRLTIPSRPWALV Trigger: AACCAGGGCCCAGGGCCTGGAGGGGATGGTAAGCCTCCAGCCCCACCTTCTCCAGGAAGGGGTTGGTGGTCTGGCACGGGCCAAGCGTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 90 bp | AGGGCCGAGAGCTGCTTACCCGGCCAGAGATCACCGTGGTGGAGGTaGGCATTGTGGATGGCCAGGTACGCTTGGCCCGTGCCAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: RAESCLPGQRSPWWR*ALWMARYAWPVPDH Trigger: GTGGTCTGGCACGGGCCAAGCGTACCTGGCCATCCACAATGCTCACCTCCACCACGGTGATCTCTGGCCGGGTAAGCAGCTCTCGGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 90 bp | AGAGGGCTGTGGCTGAGGGTGAGCAGGAACCACACAGAGCTGGGATaGGGCTCAGGGAGCGGTTGCACCTCCGGGTCCTTGGGTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RGLWLRVSRNHTELG*GSGSGCTSGSLGSQ Trigger: CTGGGAACCCAAGGACCCGGAGGTGCAACCGCTCCCTGAGCCTCATCCCAGCTCTGTGTGGTTCCTGCTCACCCTCAGCCACAGCCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 90 bp | CGTGGTGGAGGTGAGCATTGTGGATGGCCAGGTACGCTTGGCCCGTaGCAGACCACCAACCCCTTCCTGGAGAAGGTGGGGCTGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: RGGGEHCGWPGTLGP*QTTNPFLEKVGLEA Trigger: AGCCTCCAGCCCCACCTTCTCCAGGAAGGGGTTGGTGGTCTGGCACGGGCCAAGCGTACCTGGCCATCCACAATGCTCACCTCCACCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 90 bp | CTCAGGGAGCGGTTGCACCTCCGGGTCCTTGGGTTCCCAGTGGGCTaGTCCATCCTACTCCTGCCTGTTCCCTGCCATCTCCCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LRERLHLRVLGFPVG*SILLLPVPCHLPVP Trigger: AGGGACAGGGAGATGGCAGGGAACAGGCAGGAGTAGGATGGAGCAGCCCACTGGGAACCCAAGGACCCGGAGGTGCAACCGCTCCCTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 90 bp | GCTTACCCGGCCAGAGATCACCGTGGTGGAGGTGAGCATTGTGGATaGCCAGGTACGCTTGGCCCGTGCCAGACCACCAACCCCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AYPARDHRGGGEHCG*PGTLGPCQTTNPFL Trigger: CAGGAAGGGGTTGGTGGTCTGGCACGGGCCAAGCGTACCTGGCCATCCACAATGCTCACCTCCACCACGGTGATCTCTGGCCGGGTAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 90 bp | ACCTCCGGGTCCTTGGGTTCCCAGTGGGCTGCTCCATCCTACTCCTaGCTGTTCCCTGCCATCTCCCTGTCCCTTGCCATCTCTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: TSGSLGSQWAAPSYS*LFPAISLSLAISLA Trigger: AGCCAGAGAGATGGCAAGGGACAGGGAGATGGCAGGGAACAGGCAGGAGTAGGATGGAGCAGCCCACTGGGAACCCAAGGACCCGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 90 bp | GCTCTTGAGTTGGTTGGTGGTGGGGGCAAATACCTGCCCTTTGCATaGTGTCCCCAGTGGGTGAAGACGCAGGCTCTCATGCTGCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: ALELVGGGGKYLPFA*CPQWVKTQALMLPL Trigger: CAGCGGCAGCATGAGAGCCTGCGTCTTCACCCACTGGGGACAGCATGCAAAGGGCAGGTATTTGCCCCCACCACCAACCAACTCAAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 90 bp | TCGGAGTTGAAGAAGCTTCTGGGAATGCAGCAAGAGTCCCGCCTCTaGAAGCTAGGCAGCCAAGAGGGCCGAGAGCTGCTTACCCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SELKKLLGMQQESRL*KLGSQEGRELLTRP Trigger: TGGCCGGGTAAGCAGCTCTCGGCCCTCTTGGCTGCCTAGCTTCCAGAGGCGGGACTCTTGCTGCATTCCCAGAAGCTTCTTCAACTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 90 bp | GCAAAGGCACTCCCTTGCGGGGGCTTAGCACAGTGTGATTCACTTTaGAGCAGTGCCTATCAGAAAGACTTGCCACCTGGGGCTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: AKALPCGGLAQCDSL*SSAYQKDLPPGAGC Trigger: GCACCCAGCCCCAGGTGGCAAGTCTTTCTGATAGGCACTGCTCCAAAGTGAATCACACTGTGCTAAGCCCCCGCAAGGGAGTGCCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 90 bp | GTCCCTTGCCATCTCTCTGGCTCTCAGGTTTCCTGGAGTCGGAGTTaGAGAAGCTTCTGGGAATGCAGCAAGAGTCCCGCCTCTGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: VPCHLSGSQVSWSRS*RSFWECSKSPASGS Trigger: GCTTCCAGAGGCGGGACTCTTGCTGCATTCCCAGAAGCTTCTTCAACTCCGACTCCAGGAAACCTGAGAGCCAGAGAGATGGCAAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 90 bp | ACTCCTGCCTGTTCCCTGCCATCTCCCTGTCCCTTGCCATCTCTCTaGCTCTCAGGTTTCCTGGAGTCGGAGTTGAAGAAGCTTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: TPACSLPSPCPLPSL*LSGFLESELKKLLG Trigger: TCCCAGAAGCTTCTTCAACTCCGACTCCAGGAAACCTGAGAGCCAGAGAGATGGCAAGGGACAGGGAGATGGCAGGGAACAGGCAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 90 bp | GTTTCTTTACCCGTGAAAGGGGACTGTTGCAAGGACCTCCTGAGATaGCGAGTGTGCAGCTGTAAGCTGCAAAGGCACTCCCTTGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: VSLPVKGDCCKDLLR*RVCSCKLQRHSLAG Trigger: CCCCGCAAGGGAGTGCCTTTGCAGCTTACAGCTGCACACTCGTCATCTCAGGAGGTCCTTGCAACAGTCCCCTTTCACGGGTAAAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 90 bp | ACCCCGCTGGGTCAGACCGAGTACCATCCTGCTGCTCCCCTTCCTTaGCATCAGCCTTTAAAGGTTAGGCCTGTCTCAGCTTCTTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: TPLGQTEYHPAAPLP*HQPLKVRPVSASLS Trigger: ACTCAAAGAAGCTGAGACAGGCCTAACCTTTAAAGGCTGATGTCAAGGAAGGGGAGCAGCAGGATGGTACTCGGTCTGACCCAGCGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 90 bp | AGGGCATGGGGTTTGGAGGCCAGAGGTTTTAGTCTGGCATTAGCTTaGTCTGTGAGGTTGAGTAGAGGCCTCAGTTTCTTTACCCGTGAA | + |
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Preference number: 5 (lower is better) Translates to: RAWGLEARGFSLALA*SVRLSRGLSFFTRE Trigger: TTCACGGGTAAAGAAACTGAGGCCTCTACTCAACCTCACAGAGCAAGCTAATGCCAGACTAAAACCTCTGGCCTCCAAACCCCATGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 90 bp | GACATTTGCCCTGACAGTCTGTGTAGCTTACAAAAAGAAAGGGCATaGGGTTTGGAGGCCAGAGGTTTTAGTCTGGCATTAGCTTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: DICPDSLCSLQKERA*GLEARGFSLALACS Trigger: AGAGCAAGCTAATGCCAGACTAAAACCTCTGGCCTCCAAACCCCATGCCCTTTCTTTTTGTAAGCTACACAGACTGTCAGGGCAAATGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 90 bp | GTGTTGATGACCTTTTTGGTTAATTTCCGTCCATTCATCATCTCATaGTTTTATCCAGTGGACATTTGCCCTGACAGTCTGTGTAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: VLMTFLVNFRPFIIS*FYPVDICPDSLCSL Trigger: TAAGCTACACAGACTGTCAGGGCAAATGTCCACTGGATAAAAGCATGAGATGATGAATGGACGGAAATTAACCAAAAAGGTCATCAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 72 bp | CATCATCCGCAGGGTGGAGCGGGGCGGCCTGGGACCTaGAGTCCGGGAAGAGTCGAAGGCCTGTGGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: HHPQGGAGRPGT*SPGRVEGLWAA Trigger: GGCCGCCCACAGGCCTTCGACTCTTCCCGGACTCCAGGTCCCAGGCCGCCCCGCTCCACCCTGCGGATGATG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | CGCACCGAAGTGCAGCAAACACGTCTCGGCCACGACTaGCAGGCCACCCCAGGCTCCAGCGGAGCGTGCGTA | + |
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Preference number: 6 (lower is better) Translates to: RTEVQQTRLGHD*QATPGSSGACV Trigger: TACGCACGCTCCGCTGGAGCCTGGGGTGGCCTGGCAGTCGTGGCCGAGACGTGTTTGCTGCACTTCGGTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 72 bp | TTGTCTCCATCATCCGCAGGGTGGAGCGGGGCGGCCTaGGACCTGGAGTCCGGGAAGAGTCGAAGGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSPSSAGWSGAA*DLESGKSRRPV Trigger: CACAGGCCTTCGACTCTTCCCGGACTCCAGGTCCCAGGCCGCCCCGCTCCACCCTGCGGATGATGGAGACAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | GAGGGCGGAACCAAGAGGTTGGCACCGCAGTGCCTGTaGGCACCGAAGTGCAGCAAACACGTCTCGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: EGGTKRLAPQCL*APKCSKHVSAT Trigger: CGTGGCCGAGACGTGTTTGCTGCACTTCGGTGCGCACAGGCACTGCGGTGCCAACCTCTTGGTTCCGCCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 72 bp | GATGAGGCTCAGGGAGCGGTTGCACCTCCGGGTCCTTaGGTTCCCAGTGGGCTGCTCCATCCTACTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DEAQGAVAPPGP*VPSGLLHPTPA Trigger: GGCAGGAGTAGGATGGAGCAGCCCACTGGGAACCCAAGGACCCGGAGGTGCAACCGCTCCCTGAGCCTCATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | AAGAGGTTGGCACCGCAGTGCCTGTGCGCACCGAAGTaGAGCAAACACGTCTCGGCCACGACTGCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KRLAPQCLCAPK*SKHVSATTARP Trigger: TGGCCTGGCAGTCGTGGCCGAGACGTGTTTGCTGCACTTCGGTGCGCACAGGCACTGCGGTGCCAACCTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | GGTGAGCATTGTGGATGGCCAGGTACGCTTGGCCCGTaGCAGACCACCAACCCCTTCCTGGAGAAGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GEHCGWPGTLGP*QTTNPFLEKVG Trigger: CCCCACCTTCTCCAGGAAGGGGTTGGTGGTCTGGCACGGGCCAAGCGTACCTGGCCATCCACAATGCTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 90 bp | GAGATCACCGTGGTGGAGGTGAGCATTGTGGATGGCCAGGTACGCTaGGCCCGTGCCAGACCACCAACCCCTTCCTGGAGAAGGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: EITVVEVSIVDGQVR*ARARPPTPSWRRWG Trigger: GCCCCACCTTCTCCAGGAAGGGGTTGGTGGTCTGGCACGGGCCAAGCGTACCTGGCCATCCACAATGCTCACCTCCACCACGGTGATCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 72 bp | GCCAGAGATCACCGTGGTGGAGGTGAGCATTGTGGATaGCCAGGTACGCTTGGCCCGTGCCAGACCACCAAC | + |
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Preference number: 6 (lower is better) Translates to: ARDHRGGGEHCG*PGTLGPCQTTN Trigger: GTTGGTGGTCTGGCACGGGCCAAGCGTACCTGGCCATCCACAATGCTCACCTCCACCACGGTGATCTCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 72 bp | GTGGTGGAGGTGAGCATTGTGGATGGCCAGGTACGCTaGGCCCGTGCCAGACCACCAACCCCTTCCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: VVEVSIVDGQVR*ARARPPTPSWR Trigger: TCTCCAGGAAGGGGTTGGTGGTCTGGCACGGGCCAAGCGTACCTGGCCATCCACAATGCTCACCTCCACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | TCCTTGGGTTCCCAGTGGGCTGCTCCATCCTACTCCTaGCTGTTCCCTGCCATCTCCCTGTCCCTTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SLGSQWAAPSYS*LFPAISLSLAI Trigger: GATGGCAAGGGACAGGGAGATGGCAGGGAACAGGCAGGAGTAGGATGGAGCAGCCCACTGGGAACCCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | GGGAGCGACCCCGCTGGGTCAGACCGAGTACCATCCTaGTGCTCCCCTTCCTTGACATCAGCCTTTAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: GSDPAGSDRVPS*CSPSLTSAFKG Trigger: ACCTTTAAAGGCTGATGTCAAGGAAGGGGAGCAGCAGGATGGTACTCGGTCTGACCCAGCGGGGTCGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | TTGGTTGGTGGTGGGGGCAAATACCTGCCCTTTGCATaGTGTCCCCAGTGGGTGAAGACGCAGGCTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: LVGGGGKYLPFA*CPQWVKTQALM Trigger: CATGAGAGCCTGCGTCTTCACCCACTGGGGACAGCATGCAAAGGGCAGGTATTTGCCCCCACCACCAACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 72 bp | AAGAAGCTTCTGGGAATGCAGCAAGAGTCCCGCCTCTaGAAGCTAGGCAGCCAAGAGGGCCGAGAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KKLLGMQQESRL*KLGSQEGRELL Trigger: AAGCAGCTCTCGGCCCTCTTGGCTGCCTAGCTTCCAGAGGCGGGACTCTTGCTGCATTCCCAGAAGCTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 72 bp | CCCGTGAAAGGGGACTGTTGCAAGGACCTCCTGAGATaGCGAGTGTGCAGCTGTAAGCTGCAAAGGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: PVKGDCCKDLLR*RVCSCKLQRHS Trigger: GGAGTGCCTTTGCAGCTTACAGCTGCACACTCGTCATCTCAGGAGGTCCTTGCAACAGTCCCCTTTCACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 90 bp | TGTCCCTTGCCATCTCTCTGGCTCTCAGGTTTCCTGGAGTCGGAGTaGAAGAAGCTTCTGGGAATGCAGCAAGAGTCCCGCCTCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CPLPSLWLSGFLESE*KKLLGMQQESRLWK Trigger: CTTCCAGAGGCGGGACTCTTGCTGCATTCCCAGAAGCTTCTTCAACTCCGACTCCAGGAAACCTGAGAGCCAGAGAGATGGCAAGGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 90 bp | GAACTTGCCCGATGTCACACAGCTAGTGATGGGCAGAGCTGGGACTaGAGTGCAGGCAGTTTGGGTTCCAGATCCAGGCTCTTGAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: ELARCHTASDGQSWD*SAGSLGSRSRLLSW Trigger: CCAACTCAAGAGCCTGGATCTGGAACCCAAACTGCCTGCACTCAAGTCCCAGCTCTGCCCATCACTAGCTGTGTGACATCGGGCAAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 72 bp | CATCTCTCTGGCTCTCAGGTTTCCTGGAGTCGGAGTTaGAGAAGCTTCTGGGAATGCAGCAAGAGTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: HLSGSQVSWSRS*RSFWECSKSPA Trigger: GGCGGGACTCTTGCTGCATTCCCAGAAGCTTCTTCAACTCCGACTCCAGGAAACCTGAGAGCCAGAGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 72 bp | GATGTCACACAGCTAGTGATGGGCAGAGCTGGGACTTaGGTGCAGGCAGTTTGGGTTCCAGATCCAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: DVTQLVMGRAGT*VQAVWVPDPGS Trigger: AGAGCCTGGATCTGGAACCCAAACTGCCTGCACTCAAGTCCCAGCTCTGCCCATCACTAGCTGTGTGACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 72 bp | CCATCTCTCTGGCTCTCAGGTTTCCTGGAGTCGGAGTaGAAGAAGCTTCTGGGAATGCAGCAAGAGTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PSLWLSGFLESE*KKLLGMQQESR Trigger: GCGGGACTCTTGCTGCATTCCCAGAAGCTTCTTCAACTCCGACTCCAGGAAACCTGAGAGCCAGAGAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 72 bp | AGTGATGGGCAGAGCTGGGACTTGAGTGCAGGCAGTTaGGGTTCCAGATCCAGGCTCTTGAGTTGGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SDGQSWDLSAGS*GSRSRLLSWLV Trigger: CACCAACCAACTCAAGAGCCTGGATCTGGAACCCAAACTGCCTGCACTCAAGTCCCAGCTCTGCCCATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 72 bp | GGTCAGACCGAGTACCATCCTGCTGCTCCCCTTCCTTaGCATCAGCCTTTAAAGGTTAGGCCTGTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GQTEYHPAAPLP*HQPLKVRPVSA Trigger: AGCTGAGACAGGCCTAACCTTTAAAGGCTGATGTCAAGGAAGGGGAGCAGCAGGATGGTACTCGGTCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 72 bp | AGAGGCCTCAGTTTCTTTACCCGTGAAAGGGGACTGTaGCAAGGACCTCCTGAGATGACGAGTGTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RGLSFFTRERGL*QGPPEMTSVQL Trigger: CAGCTGCACACTCGTCATCTCAGGAGGTCCTTGCAACAGTCCCCTTTCACGGGTAAAGAAACTGAGGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS TCA 72 bp | TCTGAGGTAGGTCCTATTGCCATCTCCAGTTCACAGTaGGAACTTGCCCGATGTCACACAGCTAGTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: SEVGPIAISSSQ*ELARCHTASDG Trigger: CCCATCACTAGCTGTGTGACATCGGGCAAGTTCTCACTGTGAACTGGAGATGGCAATAGGACCTACCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | GGTTTGGAGGCCAGAGGTTTTAGTCTGGCATTAGCTTaGTCTGTGAGGTTGAGTAGAGGCCTCAGTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GLEARGFSLALA*SVRLSRGLSFF Trigger: AAAGAAACTGAGGCCTCTACTCAACCTCACAGAGCAAGCTAATGCCAGACTAAAACCTCTGGCCTCCAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CCA 72 bp | CCTGACAGTCTGTGTAGCTTACAAAAAGAAAGGGCATaGGGTTTGGAGGCCAGAGGTTTTAGTCTGGCATTA | + |
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Preference number: 6 (lower is better) Translates to: PDSLCSLQKERA*GLEARGFSLAL Trigger: TAATGCCAGACTAAAACCTCTGGCCTCCAAACCCCATGCCCTTTCTTTTTGTAAGCTACACAGACTGTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 72 bp | CTCAGAGTCACAATGTCCATTATTTTTGTCTCAACTTaGCTATTCCTTTGCTATGTGGCCTTGGGCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LRVTMSIIFVST*LFLCYVALGKS Trigger: GGACTTGCCCAAGGCCACATAGCAAAGGAATAGCAAAGTTGAGACAAAAATAATGGACATTGTGACTCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS GCA 72 bp | ACCTTTTTGGTTAATTTCCGTCCATTCATCATCTCATaGTTTTATCCAGTGGACATTTGCCCTGACAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: TFLVNFRPFIIS*FYPVDICPDSL Trigger: CAGACTGTCAGGGCAAATGTCCACTGGATAAAAGCATGAGATGATGAATGGACGGAAATTAACCAAAAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 90 bp | TCTCTCTGTTTCTCACTTGACTCAGAGTCACAATGTCCATTATTTTaGTCTCAACTTTGCTATTCCTTTGCTATGTGGCCTTGGGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SLCFSLDSESQCPLF*SQLCYSFAMWPWAS Trigger: ACTTGCCCAAGGCCACATAGCAAAGGAATAGCAAAGTTGAGACAAAAATAATGGACATTGTGACTCTGAGTCAAGTGAGAAACAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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| CDS CAA 72 bp | TTCTCACTTGACTCAGAGTCACAATGTCCATTATTTTaGTCTCAACTTTGCTATTCCTTTGCTATGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: FSLDSESQCPLF*SQLCYSFAMWP Trigger: AGGCCACATAGCAAAGGAATAGCAAAGTTGAGACAAAAATAATGGACATTGTGACTCTGAGTCAAGTGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477984.1 |
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