Pregenerated sensors for LINC00331 (Homo sapiens)
Ensembl gene IDs: ENSG00000225427Ensembl transcript IDs: ENST00000446391.1, ENST00000653901.1, ENST00000654452.1, ENST00000655539.1, ENST00000658469.1, ENST00000666610.1, ENST00000667073.1, ENST00000667185.1, ENST00000670423.1, ENST00000671423.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGTGAGCTCCAGAAAACCTCGGACACACTTCCTGTTTGCGCATGTTaGGCTCTGGCTGGGGCGCTCCTCTCCTGCCTGTCTCCTACGTGC | + |
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Preference number: 5 (lower is better) Translates to: CELQKTSDTLPVCAC*ALAGALLSCLSPTC Trigger: GCACGTAGGAGACAGGCAGGAGAGGAGCGCCCCAGCCAGAGCTCAACATGCGCAAACAGGAAGTGTGTCCGAGGTTTTCTGGAGCTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000446391.1 ENST00000653901.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CCA 90 bp | GCAGAAGCAGCAGGATCTGGCTTTCTGGCAAACTCCACAGGCATTTaGGTTGGTGGCTTTGTATTTGCCTCTGGGCCTTTCCTGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: AEAAGSGFLANSTGI*VGGFVFASGPFLHR Trigger: CCTGTGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGCTGCTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS TCA 90 bp | GGTTGGTGGCTTTGTATTTGCCTCTGGGCCTTTCCTGCACAGGGCTaGGGAGGGGCTACCAGGCTGTTAGAAGCTTTGGAAACCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: GWWLCICLWAFPAQG*GGATRLLEALETIS Trigger: AGAAATGGTTTCCAAAGCTTCTAACAGCCTGGTAGCCCCTCCTCAGCCCTGTGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS GCA 90 bp | AGAGGCCAGAAGCACTTGCCAATGGGTAATTATGCCCCCTTGCTGTaGACAAGTAAGAAAGTAGCAAGCAATTCAGAGGCTGCAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RGQKHLPMGNYAPLL*TSKKVASNSEAAVQ Trigger: CTGCACTGCAGCCTCTGAATTGCTTGCTACTTTCTTACTTGTGCACAGCAAGGGGGCATAATTACCCATTGGCAAGTGCTTCTGGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654452.1 |
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| CDS GCA 90 bp | GAAAGGCCTACTTGCAGTAATTCCATACTTTGTGGCGTACTTTCGTaGAGCCACCTCCTCCGTGGTCATCTGTTGCCTTCTTGCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: ERPTCSNSILCGVLS*SHLLRGHLLPSCCL Trigger: CAAACAGCAAGAAGGCAACAGATGACCACGGAGGAGGTGGCTGCACGAAAGTACGCCACAAAGTATGGAATTACTGCAAGTAGGCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667185.1 |
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| CDS TCA 90 bp | GGTTGTGTTCTGAACCTTAGGAAGTTCTTTTATTCCAGCAGGCTTTaGACGTCTAGGTCCCTGAAGTCCAGAGGCCAGAAGCACTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: GCVLNLRKFFYSSRL*TSRSLKSRGQKHLP Trigger: TGGCAAGTGCTTCTGGCCTCTGGACTTCAGGGACCTAGACGTTCAAAGCCTGCTGGAATAAAAGAACTTCCTAAGGTTCAGAACACAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654452.1 |
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| CDS GCA 90 bp | GAGCACACAAAAGGTTCAGACACATTGATTGCCGAAAGGCCTACTTaGAGTAATTCCATACTTTGTGGCGTACTTTCGTGCAGCCACCTC | + |
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Preference number: 5 (lower is better) Translates to: EHTKGSDTLIAERPT*SNSILCGVLSCSHL Trigger: GAGGTGGCTGCACGAAAGTACGCCACAAAGTATGGAATTACTGCAAGTAGGCCTTTCGGCAATCAATGTGTCTGAACCTTTTGTGTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667185.1 |
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| CDS CCA 90 bp | TTCAACATCAGTAACAAGCAGCAGAAGCAGCAGGATCTGGCTTTCTaGCAAACTCCACAGGCATTTGGGTTGGTGGCTTTGTATTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: FNISNKQQKQQDLAF*QTPQAFGLVALYLP Trigger: AGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGCTGCTTCTGCTGCTTGTTACTGATGTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS TCA 90 bp | CTAAATCTCCATCCGAGGTCAGCTGGCATCCAAAGGGATGGTTGCTaGTTTAGTTTGTCTTGTCTGCTTTTCTTTCAGATAAACGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LNLHPRSAGIQRDGC*FSLSCLLFFQINVW Trigger: CCAGACGTTTATCTGAAAGAAAAGCAGACAAGACAAACTAAATCAGCAACCATCCCTTTGGATGCCAGCTGACCTCGGATGGAGATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000653901.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CCA 90 bp | ATGAGTAAGCAGAGCTGCTTACCTGAAGGAGTTTATAATAAGTTCTaGAGGCTAGAAAGGCCAAGATCAGGAAGCCAGCAGATTCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: MSKQSCLPEGVYNKF*RLERPRSGSQQIPS Trigger: ACTTGGAATCTGCTGGCTTCCTGATCTTGGCCTTTCTAGCCTCCAGAACTTATTATAAACTCCTTCAGGTAAGCAGCTCTGCTTACTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653901.1 |
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| CDS CCA 90 bp | TTTTATTTTTCAACATCAGTAACAAGCAGCAGAAGCAGCAGGATCTaGCTTTCTGGCAAACTCCACAGGCATTTGGGTTGGTGGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: FYFSTSVTSSRSSRI*LSGKLHRHLGWWLC Trigger: ACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGCTGCTTCTGCTGCTTGTTACTGATGTTGAAAAATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS TCA 90 bp | TTGGGTGGCTGTAACCATCATGGACAAGTCTTTGTGTTGTTTCCCTaGATGCTGGTGTTAGGTTGTGTTCTGAACCTTAGGAAGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LGGCNHHGQVFVLFP*MLVLGCVLNLRKFF Trigger: AAAGAACTTCCTAAGGTTCAGAACACAACCTAACACCAGCATTCAGGGAAACAACACAAAGACTTGTCCATGATGGTTACAGCCACCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654452.1 |
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| CDS TCA 90 bp | CTAAATCTCCATCCGAGGTCAGCTGGCATCCAAAGGGATGGTTGCTaGTTTAGTTTGTCTTGTCTGCTTTTCTTTCATTTTGGATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LNLHPRSAGIQRDGC*FSLSCLLFFHFGFL Trigger: CAAGAATCCAAAATGAAAGAAAAGCAGACAAGACAAACTAAATCAGCAACCATCCCTTTGGATGCCAGCTGACCTCGGATGGAGATTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658469.1 |
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| CDS CAA 90 bp | GATCTGGCTTTCTGGCAAACTCCACAGGCATTTGGGTTGGTGGCTTaGTATTTGCCTCTGGGCCTTTCCTGCACAGGGCTGAGGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: DLAFWQTPQAFGLVA*YLPLGLSCTGLRRG Trigger: GCCCCTCCTCAGCCCTGTGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS TCA 72 bp | TCAGATAAACGTCTGGCTGTGGGTCCCCGGCTCCTGTaGGCTCCAGAAAACCTCGGACACACTTCCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SDKRLAVGPRLL*APENLGHTSCL Trigger: CAAACAGGAAGTGTGTCCGAGGTTTTCTGGAGCTCACAGGAGCCGGGGACCCACAGCCAGACGTTTATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000653901.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CAA 72 bp | CAAACTCCACAGGCATTTGGGTTGGTGGCTTTGTATTaGCCTCTGGGCCTTTCCTGCACAGGGCTGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QTPQAFGLVALY*PLGLSCTGLRR Trigger: CCTCCTCAGCCCTGTGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CAA 90 bp | AAGCAGCAGGATCTGGCTTTCTGGCAAACTCCACAGGCATTTGGGTaGGTGGCTTTGTATTTGCCTCTGGGCCTTTCCTGCACAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KQQDLAFWQTPQAFG*VALYLPLGLSCTGL Trigger: CAGCCCTGTGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CAA 72 bp | ACGTCTAGGTCCCTGAAGTCCAGAGGCCAGAAGCACTaGCCAATGGGTAATTATGCCCCCTTGCTGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: TSRSLKSRGQKH*PMGNYAPLLCT Trigger: TGTGCACAGCAAGGGGGCATAATTACCCATTGGCAAGTGCTTCTGGCCTCTGGACTTCAGGGACCTAGACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654452.1 |
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| CDS CAA 72 bp | TTCTGGCAAACTCCACAGGCATTTGGGTTGGTGGCTTaGTATTTGCCTCTGGGCCTTTCCTGCACAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FWQTPQAFGLVA*YLPLGLSCTGL Trigger: CAGCCCTGTGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CAA 90 bp | AGCAGAAGCAGCAGGATCTGGCTTTCTGGCAAACTCCACAGGCATTaGGGTTGGTGGCTTTGTATTTGCCTCTGGGCCTTTCCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SRSSRIWLSGKLHRH*GWWLCICLWAFPAQ Trigger: CTGTGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGCTGCTTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CCA 72 bp | TGGCTTTCTGGCAAACTCCACAGGCATTTGGGTTGGTaGCTTTGTATTTGCCTCTGGGCCTTTCCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: WLSGKLHRHLGW*LCICLWAFPAQ Trigger: CTGTGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CCA 72 bp | GCAGGATCTGGCTTTCTGGCAAACTCCACAGGCATTTaGGTTGGTGGCTTTGTATTTGCCTCTGGGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: AGSGFLANSTGI*VGGFVFASGPF Trigger: GAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CAA 72 bp | GATCTGGCTTTCTGGCAAACTCCACAGGCATTTGGGTaGGTGGCTTTGTATTTGCCTCTGGGCCTTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: DLAFWQTPQAFG*VALYLPLGLSC Trigger: GCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CCA 72 bp | ATCTGGCTTTCTGGCAAACTCCACAGGCATTTGGGTTaGTGGCTTTGTATTTGCCTCTGGGCCTTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: IWLSGKLHRHLG*WLCICLWAFPA Trigger: TGCAGGAAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CCA 72 bp | AGTAACAAGCAGCAGAAGCAGCAGGATCTGGCTTTCTaGCAAACTCCACAGGCATTTGGGTTGGTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SNKQQKQQDLAF*QTPQAFGLVAL Trigger: CAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGCTGCTTCTGCTGCTTGTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CAA 72 bp | AGCAGGATCTGGCTTTCTGGCAAACTCCACAGGCATTaGGGTTGGTGGCTTTGTATTTGCCTCTGGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SRIWLSGKLHRH*GWWLCICLWAF Trigger: AAAGGCCCAGAGGCAAATACAAAGCCACCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS TCA 72 bp | TCTTTTATTCCAGCAGGCTTTGAACGTCTAGGTCCCTaGAGTCCAGAGGCCAGAAGCACTTGCCAATGGGTA | + |
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Preference number: 6 (lower is better) Translates to: SFIPAGFERLGP*SPEARSTCQWV Trigger: TACCCATTGGCAAGTGCTTCTGGCCTCTGGACTTCAGGGACCTAGACGTTCAAAGCCTGCTGGAATAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654452.1 |
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| CDS GCA 72 bp | TTATCTGAGGATCTTTCCCTGGCCCAGTCCACTCCATaGTCTTCACTAGAGGGCCAATCCCTCAAGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LSEDLSLAQSTP*SSLEGQSLKKS Trigger: ACTTTTCTTGAGGGATTGGCCCTCTAGTGAAGAGCATGGAGTGGACTGGGCCAGGGAAAGATCCTCAGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658469.1 ENST00000666610.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CCA 72 bp | TCAACATCAGTAACAAGCAGCAGAAGCAGCAGGATCTaGCTTTCTGGCAAACTCCACAGGCATTTGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: STSVTSSRSSRI*LSGKLHRHLGW Trigger: CCAACCCAAATGCCTGTGGAGTTTGCCAGAAAGCCAGATCCTGCTGCTTCTGCTGCTTGTTACTGATGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653901.1 ENST00000658469.1 ENST00000666610.1 ENST00000667073.1 ENST00000667185.1 ENST00000670423.1 ENST00000671423.1 |
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| CDS CAA 72 bp | GTACTTTCGTGCAGCCACCTCCTCCGTGGTCATCTGTaGCCTTCTTGCTGTTTGATTAGCACTCAAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: VLSCSHLLRGHL*PSCCLISTQRT Trigger: GGTTCTTTGAGTGCTAATCAAACAGCAAGAAGGCAACAGATGACCACGGAGGAGGTGGCTGCACGAAAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667185.1 |
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| CDS CAA 72 bp | GGCCAGAAGCACTTGCCAATGGGTAATTATGCCCCCTaGCTGTGCACAAGTAAGAAAGTAGCAAGCAATTCA | + |
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Preference number: 6 (lower is better) Translates to: GQKHLPMGNYAP*LCTSKKVASNS Trigger: TGAATTGCTTGCTACTTTCTTACTTGTGCACAGCAAGGGGGCATAATTACCCATTGGCAAGTGCTTCTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654452.1 |
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| CDS GCA 72 bp | AAGCACTTGCCAATGGGTAATTATGCCCCCTTGCTGTaGACAAGTAAGAAAGTAGCAAGCAATTCAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: KHLPMGNYAPLL*TSKKVASNSEA Trigger: AGCCTCTGAATTGCTTGCTACTTTCTTACTTGTGCACAGCAAGGGGGCATAATTACCCATTGGCAAGTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654452.1 |
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| CDS TCA 72 bp | ACCTCCTCCGTGGTCATCTGTTGCCTTCTTGCTGTTTaGTTAGCACTCAAAGAACCTACATTTGAAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: TSSVVICCLLAV*LALKEPTFEAV Trigger: TACAGCTTCAAATGTAGGTTCTTTGAGTGCTAATCAAACAGCAAGAAGGCAACAGATGACCACGGAGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667185.1 |
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| CDS GCA 72 bp | CTTACTAGGCAGGAGTACGAGATGAGTAAGCAGAGCTaGTTACCTGAAGGAGTTTATAATAAGTTCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LTRQEYEMSKQS*LPEGVYNKFWR Trigger: CCTCCAGAACTTATTATAAACTCCTTCAGGTAAGCAGCTCTGCTTACTCATCTCGTACTCCTGCCTAGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653901.1 |
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| CDS GCA 72 bp | AAAGGTTCAGACACATTGATTGCCGAAAGGCCTACTTaGAGTAATTCCATACTTTGTGGCGTACTTTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: KGSDTLIAERPT*SNSILCGVLSC Trigger: GCACGAAAGTACGCCACAAAGTATGGAATTACTGCAAGTAGGCCTTTCGGCAATCAATGTGTCTGAACCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667185.1 |
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| CDS TCA 72 bp | TTACCTGAAGGAGTTTATAATAATGTAAGGATTATCTaGGGATCTTTCCCTGGCCCAGTCCACTCCATGCTC | + |
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Preference number: 6 (lower is better) Translates to: LPEGVYNNVRII*GSFPGPVHSML Trigger: GAGCATGGAGTGGACTGGGCCAGGGAAAGATCCTCAGATAATCCTTACATTATTATAAACTCCTTCAGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671423.1 |
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| CDS GCA 72 bp | TCTCCAGACACATTAATTCAGCTGCCTTTTGGAAATTaGCACTTAGATGTCCTCACAGTTTCCTCAAACCTA | + |
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Preference number: 6 (lower is better) Translates to: SPDTLIQLPFGN*HLDVLTVSSNL Trigger: TAGGTTTGAGGAAACTGTGAGGACATCTAAGTGGCAATTTCCAAAAGGCAGCTGAATTAATGTGTCTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658469.1 |
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| CDS GCA 72 bp | CTTACTAGGCAGGAGTACGAGATGAGTAAGCAGAGCTaGTTACCTGAAGGAGTTTATAATAATGTAAGGATT | + |
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Preference number: 6 (lower is better) Translates to: LTRQEYEMSKQS*LPEGVYNNVRI Trigger: AATCCTTACATTATTATAAACTCCTTCAGGTAAGCAGCTCTGCTTACTCATCTCGTACTCCTGCCTAGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671423.1 |
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| CDS CAA 72 bp | ATTTCTGGAGAGAGTCAACCTCTTATCACTTCTAATTaGGTAATTTCACTTGGTTCCTTTGGGCACCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ISGESQPLITSN*VISLGSFGHLK Trigger: CTTCAGGTGCCCAAAGGAACCAAGTGAAATTACCAAATTAGAAGTGATAAGAGGTTGACTCTCTCCAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658469.1 |
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| CDS CAA 72 bp | ATTTCTGGAGAGAGTCAACCTCTTATCACTTCTAATTaGGTAATTTCACTTGGTTCCTTTGGGCAATGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ISGESQPLITSN*VISLGSFGQCS Trigger: AGAACATTGCCCAAAGGAACCAAGTGAAATTACCAAATTAGAAGTGATAAGAGGTTGACTCTCTCCAGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655539.1 |
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| CDS CAA 72 bp | ATTTCTGGAGAGAGTCAACCTCTTATCACTTCTAATTaGGTAATTTCACTTGGTTCCTTTGGGCAATGTAAG | + |
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Preference number: 6 (lower is better) Translates to: ISGESQPLITSN*VISLGSFGQCK Trigger: CTTACATTGCCCAAAGGAACCAAGTGAAATTACCAAATTAGAAGTGATAAGAGGTTGACTCTCTCCAGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670423.1 |
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