Pregenerated sensors for LINC00327 (Homo sapiens)
Ensembl gene IDs: ENSG00000232977Ensembl transcript IDs: ENST00000443778.3, ENST00000575689.4, ENST00000576696.2, ENST00000655268.1, ENST00000656862.1, ENST00000658244.1, ENST00000661061.1, ENST00000671576.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGCACGGCTTCGGGGCCACTTCTAGGCTCTCAACACGCGGCCGCTaGTGGGAATCCTGGCGGCCGCGGCTCTTCGCTCTCCAGTGGACC | + |
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Preference number: 5 (lower is better) Translates to: RHGFGATSRLSTRGR*WESWRPRLFALQWT Trigger: GGTCCACTGGAGAGCGAAGAGCCGCGGCCGCCAGGATTCCCAGCAGCGGCCGCGTGTTGAGAGCCTAGAAGTGGCCCCGAAGCCGTGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 90 bp | CACGGCTTCGGGGCCACTTCTAGGCTCTCAACACGCGGCCGCTGCTaGGAATCCTGGCGGCCGCGGCTCTTCGCTCTCCAGTGGACCCAG | + |
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Preference number: 5 (lower is better) Translates to: HGFGATSRLSTRGRC*ESWRPRLFALQWTQ Trigger: CTGGGTCCACTGGAGAGCGAAGAGCCGCGGCCGCCAGGATTCCCAGCAGCGGCCGCGTGTTGAGAGCCTAGAAGTGGCCCCGAAGCCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS TCA 90 bp | CACACAGTGGGGCTCCTGCCACCCCGGGCCTTCTTGTGTCCTAGCTaGGCTGTGGACGGCCCTGCTCTCCCACCGGATCCTCCTGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: HTVGLLPPRAFLCPS*AVDGPALPPDPPGS Trigger: TGACCCAGGAGGATCCGGTGGGAGAGCAGGGCCGTCCACAGCTCAGCTAGGACACAAGAAGGCCCGGGGTGGCAGGAGCCCCACTGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 90 bp | TGGGGCTCCTGCCACCCCGGGCCTTCTTGTGTCCTAGCTGAGCTGTaGACGGCCCTGCTCTCCCACCGGATCCTCCTGGGTCATGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: WGSCHPGPSCVLAEL*TALLSHRILLGHGR Trigger: CCTTCCATGACCCAGGAGGATCCGGTGGGAGAGCAGGGCCGTCCACAGCTCAGCTAGGACACAAGAAGGCCCGGGGTGGCAGGAGCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS TCA 90 bp | TTGTGCCCTCCAGTGGTTGAGCGTGAAGTCATCAGGCTGTTCGGGTaGCAGCAGGGCTCGCAGGAAAGCGCAGGCCGTGCTAAACCGCCG | + |
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Preference number: 5 (lower is better) Translates to: LCPPVVEREVIRLFG*QQGSQESAGRAKPP Trigger: CGGCGGTTTAGCACGGCCTGCGCTTTCCTGCGAGCCCTGCTGTCACCCGAACAGCCTGATGACTTCACGCTCAACCACTGGAGGGCACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 90 bp | CCGGAAAGCACCGAATCGCCGTGTAGACCGGTCACCAAGTATAACTaGGAGCCCCAAGGCGTCACCAGCATGGGCATCCCAGCCTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: PESTESPCRPVTKYN*EPQGVTSMGIPASV Trigger: CACCGAGGCTGGGATGCCCATGCTGGTGACGCCTTGGGGCTCGCAGTTATACTTGGTGACCGGTCTACACGGCGATTCGGTGCTTTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 90 bp | ACTGCGAGCCCCAAGGCGTCACCAGCATGGGCATCCCAGCCTCGGTaGTTCAAGTCCTACTTCTGCTTGGCTATCGGGAAAGGCACGGCT | + |
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Preference number: 5 (lower is better) Translates to: TASPKASPAWASQPR*FKSYFCLAIGKGTA Trigger: AGCCGTGCCTTTCCCGATAGCCAAGCAGAAGTAGGACTTGAAGCACCGAGGCTGGGATGCCCATGCTGGTGACGCCTTGGGGCTCGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 90 bp | TCACCAGCATGGGCATCCCAGCCTCGGTGCTTCAAGTCCTACTTCTaGTTGGCTATCGGGAAAGGCACGGCTTCGGGGCCACTTCTAGGC | + |
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Preference number: 5 (lower is better) Translates to: SPAWASQPRCFKSYF*LAIGKGTASGPLLG Trigger: GCCTAGAAGTGGCCCCGAAGCCGTGCCTTTCCCGATAGCCAAGCAGAAGTAGGACTTGAAGCACCGAGGCTGGGATGCCCATGCTGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 90 bp | GACCGGTCACCAAGTATAACTGCGAGCCCCAAGGCGTCACCAGCATaGGCATCCCAGCCTCGGTGCTTCAAGTCCTACTTCTGCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: DRSPSITASPKASPA*ASQPRCFKSYFCLA Trigger: AGCCAAGCAGAAGTAGGACTTGAAGCACCGAGGCTGGGATGCCCATGCTGGTGACGCCTTGGGGCTCGCAGTTATACTTGGTGACCGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 90 bp | CTAGTCAAAGTCCTTAGGAAGCGATTCGGCAGACGCAGGCCCAGGTaGCGAGGAGAATGGCCCCTTAGCCAGCTTTTAGGGTTCCGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LVKVLRKRFGRRRPR*RGEWPLSQLLGFRE Trigger: CTCACGGAACCCTAAAAGCTGGCTAAGGGGCCATTCTCCTCGCCACCTGGGCCTGCGTCTGCCGAATCGCTTCCTAAGGACTTTGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655268.1 ENST00000656862.1 ENST00000671576.1 |
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| CDS CCA 90 bp | CACTCTGTGCATCACCCCGCACAGCTGCTACTAATTAAGCCCTTCTaGGCACCATGTGTTTCCGTGACCTGCTCTTCCTGTGTCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: HSVHHPAQLLLIKPF*APCVSVTCSSCVLY Trigger: GTACAAGACACAGGAAGAGCAGGTCACGGAAACACATGGTGCCCAGAAGGGCTTAATTAGTAGCAGCTGTGCGGGGTGATGCACAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 90 bp | AGGATTCTTTGGAGACATGATCAGCTTCCTTACCCACCACCTGTGTaGCTTGGGCAACTGGAGTTCTCAAGCTCCAAGGCCTTCGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: RILWRHDQLPYPPPV*LGQLEFSSSKAFVF Trigger: GAAAACGAAGGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGGTAAGGAAGCTGATCATGTCTCCAAAGAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 90 bp | CTCTGGGCTGAATGCACAAGCCTTCAGCCTGAGTCTTCTGTTCACTaGGTTCCTGGAGCCAGTGCTAATCTCCAAAATGTGTCCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LWAECTSLQPESSVH*VPGASANLQNVSFL Trigger: AAGAAAGGACACATTTTGGAGATTAGCACTGGCTCCAGGAACCCAGTGAACAGAAGACTCAGGCTGAAGGCTTGTGCATTCAGCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000443778.3 ENST00000655268.1 ENST00000656862.1 ENST00000661061.1 ENST00000671576.1 |
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| CDS CCA 90 bp | AGAAGTCAGGAAAGTCAATATGCTTTCACCACCACCTGTGTGCCTTaGGCAACTGGAGTTCTCAAGCTCCAAGGCCTTCGTTTTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: RSQESQYAFTTTCVP*ATGVLKLQGLRFLS Trigger: GCTGAGAAAACGAAGGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGTGAAAGCATATTGACTTTCCTGACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575689.4 |
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| CDS CCA 90 bp | GGAAAGTCAATATGCTTTCACCACCACCTGTGTGCCTTGGGCAACTaGAGTTCTCAAGCTCCAAGGCCTTCGTTTTCTCAGCTGCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: GKSICFHHHLCALGN*SSQAPRPSFSQLQN Trigger: ATTTTGCAGCTGAGAAAACGAAGGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGTGAAAGCATATTGACTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575689.4 |
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| CDS TCA 90 bp | ATGCGAGAATGTGCTCAGGAATCCGTGCGTGAGATGATGAGCTTGTaGGCTGATGTTGATTCTGTGCAGTTCCCAGTGTCTTATTCACAG | + |
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Preference number: 5 (lower is better) Translates to: MRECAQESVREMMSL*ADVDSVQFPVSYSQ Trigger: CTGTGAATAAGACACTGGGAACTGCACAGAATCAACATCAGCTCACAAGCTCATCATCTCACGCACGGATTCCTGAGCACATTCTCGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS GCA 90 bp | GACTGGAGTATAACCTCCAGTAAACTCCTATTAAATCTCTACTGTTaGCAGTCTGCGCTCCTGGATTTTCAAGGGGCTCCGTGGAATTGG | + |
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Preference number: 5 (lower is better) Translates to: DWSITSSKLLLNLYC*QSALLDFQGAPWNW Trigger: CCAATTCCACGGAGCCCCTTGAAAATCCAGGAGCGCAGACTGGCAACAGTAGAGATTTAATAGGAGTTTACTGGAGGTTATACTCCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000443778.3 ENST00000656862.1 ENST00000661061.1 ENST00000671576.1 |
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| CDS GCA 90 bp | ACAATCTCATTTTCCAGGTCTACATTCACTGGAAGGGTCCCCTCCTaGAGGAACTCATTACTGGTCAACCACTGTGCCCTGTATGAAATC | + |
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Preference number: 5 (lower is better) Translates to: TISFSRSTFTGRVPS*RNSLLVNHCALYEI Trigger: GATTTCATACAGGGCACAGTGGTTGACCAGTAATGAGTTCCTGCAGGAGGGGACCCTTCCAGTGAATGTAGACCTGGAAAATGAGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671576.1 |
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| CDS CCA 90 bp | GGTCTACATTCACTGGAAGGGTCCCCTCCTGCAGGAACTCATTACTaGTCAACCACTGTGCCCTGTATGAAATCTACATGCTGTAGATTT | + |
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Preference number: 5 (lower is better) Translates to: GLHSLEGSPPAGTHY*STTVPCMKSTCCRF Trigger: AAATCTACAGCATGTAGATTTCATACAGGGCACAGTGGTTGACCAGTAATGAGTTCCTGCAGGAGGGGACCCTTCCAGTGAATGTAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671576.1 |
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| CDS TCA 90 bp | AGTCTGATTCAGTTTCAGGGCCATCTCCTCCGAGACCTTCCTTCCTaGCTGCTTCTCGAGTTCCCCTATAAAACAGTGACTATTAAATCT | + |
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Preference number: 5 (lower is better) Translates to: SLIQFQGHLLRDLPS*LLLEFPYKTVTIKS Trigger: AGATTTAATAGTCACTGTTTTATAGGGGAACTCGAGAAGCAGTCAGGAAGGAAGGTCTCGGAGGAGATGGCCCTGAAACTGAATCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658244.1 |
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| CDS TCA 90 bp | CTCCCTCCAACAATGGTCTTTCCTTTGAATTTGCACTTTGGAGTCTaGCACAGATTAGTGCTTCCTAGTCCTCTAACTGTAACACATGCC | + |
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Preference number: 5 (lower is better) Translates to: LPPTMVFPLNLHFGV*HRLVLPSPLTVTHA Trigger: GGCATGTGTTACAGTTAGAGGACTAGGAAGCACTAATCTGTGTCAGACTCCAAAGTGCAAATTCAAAGGAAAGACCATTGTTGGAGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443778.3 |
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| CDS CCA 90 bp | GTGAAGTCCTTCTTCCCCAGAGTCCTTAATTGTTCTGAATTTAAGTaGATTTTCTCTGGGCTGAATGCACAAGCCTTCAGCCTGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: VKSFFPRVLNCSEFK*IFSGLNAQAFSLSL Trigger: AAGACTCAGGCTGAAGGCTTGTGCATTCAGCCCAGAGAAAATCCACTTAAATTCAGAACAATTAAGGACTCTGGGGAAGAAGGACTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000443778.3 ENST00000655268.1 ENST00000656862.1 ENST00000661061.1 ENST00000671576.1 |
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| CDS TCA 90 bp | GCATTAAGATACTTGGAGATTTCTCTTTTTCTTTGGCAAGAAGCATaGCTGAGACAGGTAAGGGCTAGGAATTCTTCCGGATCACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: ALRYLEISLFLWQEA*LRQVRARNSSGSLP Trigger: AGGGAGTGATCCGGAAGAATTCCTAGCCCTTACCTGTCTCAGTCATGCTTCTTGCCAAAGAAAAAGAGAAATCTCCAAGTATCTTAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443778.3 |
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| CDS CCA 90 bp | GGAAAGTCAATATGCTTTCAATCATCCTGTGGTCTGTATGCTCTGTaGCTACACACCTGGCTGAGAACAGAATTAATGATGAGAAACGTG | + |
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Preference number: 5 (lower is better) Translates to: GKSICFQSSCGLYAL*LHTWLRTELMMRNV Trigger: CACGTTTCTCATCATTAATTCTGTTCTCAGCCAGGTGTGTAGCCACAGAGCATACAGACCACAGGATGATTGAAAGCATATTGACTTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS CCA 90 bp | CTAATCTCCAAAATGTGTCCTTTCTTGGTTTCCATCTTCTTTGACTaGAGTATAACCTCCAGTAAACTCCTTAGGCCCATCTCCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: LISKMCPFLVSIFFD*SITSSKLLRPISHS Trigger: AGAGTGGGAGATGGGCCTAAGGAGTTTACTGGAGGTTATACTCCAGTCAAAGAAGATGGAAACCAAGAAAGGACACATTTTGGAGATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655268.1 |
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| CDS GCA 90 bp | ATTTTAGAACACACCTATCACTTCAGAAGATCCCTCTTGACCACTTaGAGTGATTTCACTCTTCAGTCCCAGCCACAGGAATTCCTAATT | + |
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Preference number: 5 (lower is better) Translates to: ILEHTYHFRRSLLTT*SDFTLQSQPQEFLI Trigger: AATTAGGAATTCCTGTGGCTGGGACTGAAGAGTGAAATCACTGCAAGTGGTCAAGAGGGATCTTCTGAAGTGATAGGTGTGTTCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661061.1 |
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| CDS CCA 90 bp | TCCTTTATCAGACACTCAACAGAAGCAGACTTTGTCAATTACTGGTaGAGAGAGTGTCCTAAAGAAGCTATCCATGAAAACAAGGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: SFIRHSTEADFVNYW*RECPKEAIHENKGD Trigger: GTCACCCTTGTTTTCATGGATAGCTTCTTTAGGACACTCTCTCCACCAGTAATTGACAAAGTCTGCTTCTGTTGAGTGTCTGATAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 90 bp | CAATCCTTTATCAGACACTCAACAGAAGCAGACTTTGTCAATTACTaGTGGAGAGAGTGTCCTAAAGAAGCTATCCATGAAAACAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: QSFIRHSTEADFVNY*WRECPKEAIHENKG Trigger: ACCCTTGTTTTCATGGATAGCTTCTTTAGGACACTCTCTCCACCAGTAATTGACAAAGTCTGCTTCTGTTGAGTGTCTGATAAAGGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS TCA 90 bp | CCATTGTGTCCTAAAATTTATCTGCCTTCCAATCACACTACCATGTaGAGTCCTTCTTCCCCAGAGTCCTTAATTGTTCTGAATTTAAGT | + |
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Preference number: 5 (lower is better) Translates to: PLCPKIYLPSNHTTM*SPSSPESLIVLNLS Trigger: ACTTAAATTCAGAACAATTAAGGACTCTGGGGAAGAAGGACTTCACATGGTAGTGTGATTGGAAGGCAGATAAATTTTAGGACACAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000443778.3 ENST00000655268.1 ENST00000656862.1 ENST00000661061.1 ENST00000671576.1 |
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| CDS CCA 90 bp | GAAGCTTGGGCAGTCAGTTCGAATCTGAATAAATATTTGTCAGATTaGAGAAGCGCTGAAAGCATTAAGATACTTGGAGATTTCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: EAWAVSSNLNKYLSD*RSAESIKILGDFSF Trigger: AAAAGAGAAATCTCCAAGTATCTTAATGCTTTCAGCGCTTCTCCAATCTGACAAATATTTATTCAGATTCGAACTGACTGCCCAAGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443778.3 |
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| CDS CCA 90 bp | CTAATCTCCAAAATGTGTCCTTTCTTGGTTTCCATCTTCTTTGACTaGAGTATAACCTCCAGTAAACTCCTATTAAATCTCTACTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: LISKMCPFLVSIFFD*SITSSKLLLNLYCC Trigger: GCAACAGTAGAGATTTAATAGGAGTTTACTGGAGGTTATACTCCAGTCAAAGAAGATGGAAACCAAGAAAGGACACATTTTGGAGATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000443778.3 ENST00000656862.1 ENST00000661061.1 ENST00000671576.1 |
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| CDS CCA 72 bp | GGGGCCACTTCTAGGCTCTCAACACGCGGCCGCTGCTaGGAATCCTGGCGGCCGCGGCTCTTCGCTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GATSRLSTRGRC*ESWRPRLFALQ Trigger: CTGGAGAGCGAAGAGCCGCGGCCGCCAGGATTCCCAGCAGCGGCCGCGTGTTGAGAGCCTAGAAGTGGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 72 bp | TTCGGGGCCACTTCTAGGCTCTCAACACGCGGCCGCTaGTGGGAATCCTGGCGGCCGCGGCTCTTCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FGATSRLSTRGR*WESWRPRLFAL Trigger: GAGAGCGAAGAGCCGCGGCCGCCAGGATTCCCAGCAGCGGCCGCGTGTTGAGAGCCTAGAAGTGGCCCCGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 72 bp | TCTAGGCTCTCAACACGCGGCCGCTGCTGGGAATCCTaGCGGCCGCGGCTCTTCGCTCTCCAGTGGACCCAG | + |
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Preference number: 6 (lower is better) Translates to: SRLSTRGRCWES*RPRLFALQWTQ Trigger: CTGGGTCCACTGGAGAGCGAAGAGCCGCGGCCGCCAGGATTCCCAGCAGCGGCCGCGTGTTGAGAGCCTAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 72 bp | TGCCACCCCGGGCCTTCTTGTGTCCTAGCTGAGCTGTaGACGGCCCTGCTCTCCCACCGGATCCTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: CHPGPSCVLAEL*TALLSHRILLG Trigger: ACCCAGGAGGATCCGGTGGGAGAGCAGGGCCGTCCACAGCTCAGCTAGGACACAAGAAGGCCCGGGGTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 72 bp | CGATTCGGCAGACGCAGGCCCAGGTGGCGAGGAGAATaGCCCCTTAGCCAGCTTTTAGGGTTCCGTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RFGRRRPRWRGE*PLSQLLGFREG Trigger: GCCCTCACGGAACCCTAAAAGCTGGCTAAGGGGCCATTCTCCTCGCCACCTGGGCCTGCGTCTGCCGAATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656862.1 ENST00000671576.1 |
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| CDS TCA 72 bp | CCAGTGGTTGAGCGTGAAGTCATCAGGCTGTTCGGGTaGCAGCAGGGCTCGCAGGAAAGCGCAGGCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PVVEREVIRLFG*QQGSQESAGRA Trigger: AGCACGGCCTGCGCTTTCCTGCGAGCCCTGCTGTCACCCGAACAGCCTGATGACTTCACGCTCAACCACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 72 bp | TGGGCATCCCAGCCTCGGTGCTTCAAGTCCTACTTCTaGTTGGCTATCGGGAAAGGCACGGCTTCGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WASQPRCFKSYF*LAIGKGTASGP Trigger: TGGCCCCGAAGCCGTGCCTTTCCCGATAGCCAAGCAGAAGTAGGACTTGAAGCACCGAGGCTGGGATGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 72 bp | GTCCTTAGGAAGCGATTCGGCAGACGCAGGCCCAGGTaGCGAGGAGAATGGCCCCTTAGCCAGCTTTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: VLRKRFGRRRPR*RGEWPLSQLLG Trigger: CCCTAAAAGCTGGCTAAGGGGCCATTCTCCTCGCCACCTGGGCCTGCGTCTGCCGAATCGCTTCCTAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655268.1 ENST00000656862.1 ENST00000671576.1 |
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| CDS CAA 90 bp | CCAGCATGGGCATCCCAGCCTCGGTGCTTCAAGTCCTACTTCTGCTaGGCTATCGGGAAAGGCACGGCTTCGGGGCCACTTCTAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PAWASQPRCFKSYFC*AIGKGTASGPLLGS Trigger: AGAGCCTAGAAGTGGCCCCGAAGCCGTGCCTTTCCCGATAGCCAAGCAGAAGTAGGACTTGAAGCACCGAGGCTGGGATGCCCATGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 72 bp | ACCGAATCGCCGTGTAGACCGGTCACCAAGTATAACTaGGAGCCCCAAGGCGTCACCAGCATGGGCATCCCA | + |
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Preference number: 6 (lower is better) Translates to: TESPCRPVTKYN*EPQGVTSMGIP Trigger: TGGGATGCCCATGCTGGTGACGCCTTGGGGCTCGCAGTTATACTTGGTGACCGGTCTACACGGCGATTCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 72 bp | CATCCCAGCCTCGGTGCTTCAAGTCCTACTTCTGCTTaGCTATCGGGAAAGGCACGGCTTCGGGGCCACTTC | + |
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Preference number: 6 (lower is better) Translates to: HPSLGASSPTSA*LSGKARLRGHF Trigger: GAAGTGGCCCCGAAGCCGTGCCTTTCCCGATAGCCAAGCAGAAGTAGGACTTGAAGCACCGAGGCTGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CAA 72 bp | GCATCCCAGCCTCGGTGCTTCAAGTCCTACTTCTGCTaGGCTATCGGGAAAGGCACGGCTTCGGGGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: ASQPRCFKSYFC*AIGKGTASGPL Trigger: AAGTGGCCCCGAAGCCGTGCCTTTCCCGATAGCCAAGCAGAAGTAGGACTTGAAGCACCGAGGCTGGGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 72 bp | CCCAAGGCGTCACCAGCATGGGCATCCCAGCCTCGGTaGTTCAAGTCCTACTTCTGCTTGGCTATCGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PKASPAWASQPR*FKSYFCLAIGK Trigger: TTTCCCGATAGCCAAGCAGAAGTAGGACTTGAAGCACCGAGGCTGGGATGCCCATGCTGGTGACGCCTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CCA 72 bp | TGCCAGTCTGCGCTCCTGGATTTTCAAGGGGCTCCGTaGAATTGGGAGGCTGATGAAGCTGGTGACCACCCT | + |
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Preference number: 6 (lower is better) Translates to: CQSALLDFQGAP*NWEADEAGDHP Trigger: AGGGTGGTCACCAGCTTCATCAGCCTCCCAATTCCACGGAGCCCCTTGAAAATCCAGGAGCGCAGACTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000443778.3 ENST00000655268.1 ENST00000656862.1 ENST00000658244.1 ENST00000661061.1 ENST00000671576.1 |
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| CDS CCA 72 bp | CCAAGTATAACTGCGAGCCCCAAGGCGTCACCAGCATaGGCATCCCAGCCTCGGTGCTTCAAGTCCTACTTC | + |
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Preference number: 6 (lower is better) Translates to: PSITASPKASPA*ASQPRCFKSYF Trigger: GAAGTAGGACTTGAAGCACCGAGGCTGGGATGCCCATGCTGGTGACGCCTTGGGGCTCGCAGTTATACTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS CAA 72 bp | GACATGATCAGCTTCCTTACCCACCACCTGTGTGCCTaGGGCAACTGGAGTTCTCAAGCTCCAAGGCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: DMISFLTHHLCA*GNWSSQAPRPS Trigger: CGAAGGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGGTAAGGAAGCTGATCATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS TCA 72 bp | AAACCGCCGAAGGACGAAGGTGGGTCTAAAGATAGATaGATCTGCTACTCCGGAAAGCACCGAATCGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: KPPKDEGGSKDR*ICYSGKHRIAV Trigger: CACGGCGATTCGGTGCTTTCCGGAGTAGCAGATTCATCTATCTTTAGACCCACCTTCGTCCTTCGGCGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000575689.4 ENST00000576696.2 ENST00000661061.1 |
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| CDS GCA 72 bp | GTCAGGAAAGTCAATATGCTTTCACCACCACCTGTGTaGCTTGGGCAACTGGAGTTCTCAAGCTCCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VRKVNMLSPPPV*LGQLEFSSSKA Trigger: GGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGTGAAAGCATATTGACTTTCCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575689.4 |
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| CDS GCA 72 bp | TTTTCCAGGTCTACATTCACTGGAAGGGTCCCCTCCTaGAGGAACTCATTACTGGTCAACCACTGTGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FSRSTFTGRVPS*RNSLLVNHCAL Trigger: CAGGGCACAGTGGTTGACCAGTAATGAGTTCCTGCAGGAGGGGACCCTTCCAGTGAATGTAGACCTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671576.1 |
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| CDS CCA 72 bp | TTCCCTCCATGTCCTGTGCATCTGTCATGGTGCTCCTaGGGCGATGCTACTCACTTCATAGTTAAGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FPPCPVHLSWCS*GDATHFIVKQA Trigger: AGCCTGCTTAACTATGAAGTGAGTAGCATCGCCCCAGGAGCACCATGACAGATGCACAGGACATGGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000443778.3 ENST00000655268.1 ENST00000656862.1 ENST00000661061.1 ENST00000671576.1 |
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| CDS CAA 72 bp | GGAAAGTCAATATGCTTTCACCACCACCTGTGTGCCTaGGGCAACTGGAGTTCTCAAGCTCCAAGGCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: GKSICFHHHLCA*GNWSSQAPRPS Trigger: CGAAGGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGTGAAAGCATATTGACTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575689.4 |
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| CDS TCA 72 bp | CAGTTTCAGGGCCATCTCCTCCGAGACCTTCCTTCCTaGCTGCTTCTCGAGTTCCCCTATAAAACAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: QFQGHLLRDLPS*LLLEFPYKTVT Trigger: AGTCACTGTTTTATAGGGGAACTCGAGAAGCAGTCAGGAAGGAAGGTCTCGGAGGAGATGGCCCTGAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658244.1 |
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| CDS CCA 72 bp | ATATGCTTTCACCACCACCTGTGTGCCTTGGGCAACTaGAGTTCTCAAGCTCCAAGGCCTTCGTTTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: ICFHHHLCALGN*SSQAPRPSFSQ Trigger: CTGAGAAAACGAAGGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGTGAAAGCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575689.4 |
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| CDS CCA 72 bp | GAAAGTCAATATGCTTTCACCACCACCTGTGTGCCTTaGGCAACTGGAGTTCTCAAGCTCCAAGGCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: ESQYAFTTTCVP*ATGVLKLQGLR Trigger: ACGAAGGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGTGAAAGCATATTGACTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575689.4 |
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| CDS CCA 72 bp | TCACTGGAAGGGTCCCCTCCTGCAGGAACTCATTACTaGTCAACCACTGTGCCCTGTATGAAATCTACATGC | + |
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Preference number: 6 (lower is better) Translates to: SLEGSPPAGTHY*STTVPCMKSTC Trigger: GCATGTAGATTTCATACAGGGCACAGTGGTTGACCAGTAATGAGTTCCTGCAGGAGGGGACCCTTCCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671576.1 |
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| CDS TCA 72 bp | TGTGCTCAGGAATCCGTGCGTGAGATGATGAGCTTGTaGGCTGATGTTGATTCTGTGCAGTTCCCAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: CAQESVREMMSL*ADVDSVQFPVS Trigger: AGACACTGGGAACTGCACAGAATCAACATCAGCTCACAAGCTCATCATCTCACGCACGGATTCCTGAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS GCA 72 bp | GAAGGCTCCACTATTAAATCTCTACTGTTGCCAGTCTaGGCTCCTGGATTTTCAAGGGGCTCCGTGGAATTG | + |
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Preference number: 6 (lower is better) Translates to: EGSTIKSLLLPV*APGFSRGSVEL Trigger: CAATTCCACGGAGCCCCTTGAAAATCCAGGAGCGCAGACTGGCAACAGTAGAGATTTAATAGTGGAGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655268.1 |
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| CDS CAA 72 bp | CCATCCTTAGAAGGCTCCACTATTAAATCTCTACTGTaGCCAGTCTGCGCTCCTGGATTTTCAAGGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSLEGSTIKSLL*PVCAPGFSRGS Trigger: GGAGCCCCTTGAAAATCCAGGAGCGCAGACTGGCAACAGTAGAGATTTAATAGTGGAGCCTTCTAAGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655268.1 |
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| CDS CAA 90 bp | AAGAAGTCAGGAAAGTCAATATGCTTTCACCACCACCTGTGTGCCTaGGGCAACTGGAGTTCTCAAGCTCCAAGGCCTTCGTTTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: KKSGKSICFHHHLCA*GNWSSQAPRPSFSQ Trigger: CTGAGAAAACGAAGGCCTTGGAGCTTGAGAACTCCAGTTGCCCAAGGCACACAGGTGGTGGTGAAAGCATATTGACTTTCCTGACTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575689.4 |
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| CDS GCA 72 bp | CACACCTATCACTTCAGAAGATCCCTCTTGACCACTTaGAGTGATTTCACTCTTCAGTCCCAGCCACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HTYHFRRSLLTT*SDFTLQSQPQE Trigger: TTCCTGTGGCTGGGACTGAAGAGTGAAATCACTGCAAGTGGTCAAGAGGGATCTTCTGAAGTGATAGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661061.1 |
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| CDS CAA 90 bp | TTGTTTGATCCATCCTTAGAAGGCTCCACTATTAAATCTCTACTGTaGCCAGTCTGCGCTCCTGGATTTTCAAGGGGCTCCGTGGAATTG | + |
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Preference number: 6 (lower is better) Translates to: LFDPSLEGSTIKSLL*PVCAPGFSRGSVEL Trigger: CAATTCCACGGAGCCCCTTGAAAATCCAGGAGCGCAGACTGGCAACAGTAGAGATTTAATAGTGGAGCCTTCTAAGGATGGATCAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655268.1 |
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| CDS TCA 72 bp | GAAACGTGCCTGCTTCTCTGCATAAAAGATGATGTCTaGGTAGAAGGTCGCCAAGGGAGGATTAAGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ETCLLLCIKDDV*VEGRQGRIKSK Trigger: CTTGCTCTTAATCCTCCCTTGGCGACCTTCTACTCAGACATCATCTTTTATGCAGAGAAGCAGGCACGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS TCA 72 bp | CCTCCAACCCTGTTGACCAACTTATCTTTTAAAGTCTaGTTCAGTTTCAGGGCCATCTCCTCCGAGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: PPTLLTNLSFKV*FSFRAISSETF Trigger: GAAGGTCTCGGAGGAGATGGCCCTGAAACTGAATCAGACTTTAAAAGATAAGTTGGTCAACAGGGTTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658244.1 |
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| CDS GCA 72 bp | ATAACCTCCAGTAAACTCCTATTAAATCTCTACTGTTaGCAGTCTGCGCTCCTGGATTTTCAAGGGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ITSSKLLLNLYC*QSALLDFQGAP Trigger: CGGAGCCCCTTGAAAATCCAGGAGCGCAGACTGGCAACAGTAGAGATTTAATAGGAGTTTACTGGAGGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000443778.3 ENST00000656862.1 ENST00000661061.1 ENST00000671576.1 |
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| CDS CAA 90 bp | TTGTGTGCGTGTGTGTGTTGTTCCATAAGCCTCTGTCAACGTCTTTaGCCTCCCTTGCTCCATATAAAATGCCTTACATTCCTCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LCACVCCSISLCQRL*PPLLHIKCLTFLPL Trigger: AAGAGGGAGGAATGTAAGGCATTTTATATGGAGCAAGGGAGGCAAAAGACGTTGACAGAGGCTTATGGAACAACACACACACGCACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443778.3 ENST00000656862.1 ENST00000661061.1 |
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| CDS CAA 72 bp | TGTTCCATAAGCCTCTGTCAACGTCTTTTGCCTCCCTaGCTCCATATAAAATGCCTTACATTCCTCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: CSISLCQRLLPP*LHIKCLTFLPL Trigger: AAGAGGGAGGAATGTAAGGCATTTTATATGGAGCAAGGGAGGCAAAAGACGTTGACAGAGGCTTATGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000443778.3 ENST00000656862.1 ENST00000661061.1 |
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| CDS GCA 72 bp | AAAGTCAATATGCTTTCAATCATCCTGTGGTCTGTATaGTCTGTGGCTACACACCTGGCTGAGAACAGAATT | + |
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Preference number: 6 (lower is better) Translates to: KVNMLSIILWSV*SVATHLAENRI Trigger: AATTCTGTTCTCAGCCAGGTGTGTAGCCACAGAGCATACAGACCACAGGATGATTGAAAGCATATTGACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS GCA 72 bp | TCTCAAAAGACCTCTCTTGCTTCCTATACTCAGTCATaGAAAATGTTCTGCAATTCTCTGAATGCCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SQKTSLASYTQS*KMFCNSLNALA Trigger: AGCCAGGGCATTCAGAGAATTGCAGAACATTTTGCATGACTGAGTATAGGAAGCAAGAGAGGTCTTTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658244.1 |
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| CDS CAA 72 bp | TGTGTGTGTTGTTCCATAAGCCTCTGTCAACGTCTTTaGCCTCCCTTGCTCCATATAAAATGCCTTACATTC | + |
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Preference number: 6 (lower is better) Translates to: CVCCSISLCQRL*PPLLHIKCLTF Trigger: GAATGTAAGGCATTTTATATGGAGCAAGGGAGGCAAAAGACGTTGACAGAGGCTTATGGAACAACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443778.3 ENST00000656862.1 ENST00000661061.1 |
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| CDS GCA 72 bp | TCACCTCTCCAGTCGTATTTCTCAAAAGACCTCTCTTaGTTCCTATACTCAGTCATGCAAAATGTTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: SPLQSYFSKDLS*FLYSVMQNVLQ Trigger: TTGCAGAACATTTTGCATGACTGAGTATAGGAAGCAAGAGAGGTCTTTTGAGAAATACGACTGGAGAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658244.1 |
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| CDS CCA 72 bp | AAAATGTGTCCTTTCTTGGTTTCCATCTTCTTTGACTaGAGTATAACCTCCAGTAAACTCCTTAGGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: KMCPFLVSIFFD*SITSSKLLRPI Trigger: GATGGGCCTAAGGAGTTTACTGGAGGTTATACTCCAGTCAAAGAAGATGGAAACCAAGAAAGGACACATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655268.1 |
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| CDS CAA 72 bp | ATCACCTCTCCAGTCGTATTTCTCAAAAGACCTCTCTaGCTTCCTATACTCAGTCATGCAAAATGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ITSPVVFLKRPL*LPILSHAKCSA Trigger: TGCAGAACATTTTGCATGACTGAGTATAGGAAGCAAGAGAGGTCTTTTGAGAAATACGACTGGAGAGGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658244.1 |
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| CDS CAA 90 bp | AGCTGCAGTGAAGCTTGGGCAGTCAGTTCGAATCTGAATAAATATTaGTCAGATTGGAGAAGCGCTGAAAGCATTAAGATACTTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SCSEAWAVSSNLNKY*SDWRSAESIKILGD Trigger: ATCTCCAAGTATCTTAATGCTTTCAGCGCTTCTCCAATCTGACAAATATTTATTCAGATTCGAACTGACTGCCCAAGCTTCACTGCAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS CAA 90 bp | TCATGTAAACTCAATCCTTTATCAGACACTCAACAGAAGCAGACTTaGTCAATTACTGGTGGAGAGAGTGTCCTAAAGAAGCTATCCATG | + |
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Preference number: 6 (lower is better) Translates to: SCKLNPLSDTQQKQT*SITGGESVLKKLSM Trigger: CATGGATAGCTTCTTTAGGACACTCTCTCCACCAGTAATTGACAAAGTCTGCTTCTGTTGAGTGTCTGATAAAGGATTGAGTTTACATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576696.2 ENST00000661061.1 |
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| CDS TCA 72 bp | ACAATGGTCTTTCCTTTGAATTTGCACTTTGGAGTCTaGCACAGATTAGTGCTTCCTAGTCCTCTAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: TMVFPLNLHFGV*HRLVLPSPLTV Trigger: TACAGTTAGAGGACTAGGAAGCACTAATCTGTGTCAGACTCCAAAGTGCAAATTCAAAGGAAAGACCATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443778.3 |
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| CDS GCA 72 bp | CAGTTCCCAGTGTCTTATTCACAGGCAAGATTTTCTTaGTCATCGTTCAGCCTTCAATGTTTTAAGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QFPVSYSQARFS*SSFSLQCFKQR Trigger: TCTTTGCTTAAAACATTGAAGGCTGAACGATGAGCAAGAAAATCTTGCCTGTGAATAAGACACTGGGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS GCA 72 bp | GGTGTCCATAGCAATAGCACTACAAGCCAGTTTCTCTaGCTTTATCTCGCTTTAATTGTACACAAAACTAAT | + |
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Preference number: 6 (lower is better) Translates to: GVHSNSTTSQFL*LYLALIVHKTN Trigger: ATTAGTTTTGTGTACAATTAAAGCGAGATAAAGGCAGAGAAACTGGCTTGTAGTGCTATTGCTATGGACACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658244.1 |
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| CDS CAA 72 bp | GAAGCTTGGGCAGTCAGTTCGAATCTGAATAAATATTaGTCAGATTGGAGAAGCGCTGAAAGCATTAAGATA | + |
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Preference number: 6 (lower is better) Translates to: EAWAVSSNLNKY*SDWRSAESIKI Trigger: TATCTTAATGCTTTCAGCGCTTCTCCAATCTGACAAATATTTATTCAGATTCGAACTGACTGCCCAAGCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS CCA 72 bp | GCAGTCAGTTCGAATCTGAATAAATATTTGTCAGATTaGAGAAGCGCTGAAAGCATTAAGATACTTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: AVSSNLNKYLSD*RSAESIKILGD Trigger: ATCTCCAAGTATCTTAATGCTTTCAGCGCTTCTCCAATCTGACAAATATTTATTCAGATTCGAACTGACTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443778.3 ENST00000658244.1 |
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| CDS CCA 72 bp | CTTACATTCCTCCCTCTTTTCCCCTACCCTTATTCATaGAATAACTGTGAATCATTGTTAGGACTTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: LTFLPLFPYPYS*NNCESLLGLYC Trigger: ACAATAAAGTCCTAACAATGATTCACAGTTATTCCATGAATAAGGGTAGGGGAAAAGAGGGAGGAATGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000443778.3 ENST00000656862.1 ENST00000661061.1 |
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| CDS CAA 90 bp | AAACTTTGGAAGGTTAAGTGGCAAAGCCGCTTGACTCCCATCACTTaGGCATTTCAATCAATAATAGAGTCTAAAGACCAAACAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: KLWKVKWQSRLTPIT*AFQSIIESKDQTIK Trigger: TTTTATTGTTTGGTCTTTAGACTCTATTATTGATTGAAATGCCAAAGTGATGGGAGTCAAGCGGCTTTGCCACTTAACCTTCCAAAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658244.1 |
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| CDS CCA 72 bp | AAAATGTGTCCTTTCTTGGTTTCCATCTTCTTTGACTaGAGTATAACCTCCAGTAAACTCCTATTAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: KMCPFLVSIFFD*SITSSKLLLNL Trigger: GAGATTTAATAGGAGTTTACTGGAGGTTATACTCCAGTCAAAGAAGATGGAAACCAAGAAAGGACACATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000443778.3 ENST00000656862.1 ENST00000661061.1 ENST00000671576.1 |
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