Pregenerated sensors for LINC00323 (Homo sapiens)
Ensembl gene IDs: ENSG00000226496Ensembl transcript IDs: ENST00000435493.2, ENST00000441268.2, ENST00000446910.1, ENST00000654244.1, ENST00000660097.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTTCCAGCTGTGGGCTTCCCCCGCACATGGTGCTCTCCCTCCTGTaGCCGCACCTGCCCGTATCTCGCCCCTCCAGAGCCCAGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: GSSCGLPPHMVLSLL*PHLPVSRPSRAQVA Trigger: GGCCACCTGGGCTCTGGAGGGGCGAGATACGGGCAGGTGCGGCCACAGGAGGGAGAGCACCATGTGCGGGGGAAGCCCACAGCTGGAACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 90 bp | GCCCAAGGCCACACGGCTGGGAGATGTCAGAGCCAGGATCCCTCCTaGGGCCTTTTGGTTCCAGCTGTGGGCTTCCCCCGCACATGGTGC | + |
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Preference number: 5 (lower is better) Translates to: AQGHTAGRCQSQDPS*GLLVPAVGFPRTWC Trigger: GCACCATGTGCGGGGGAAGCCCACAGCTGGAACCAAAAGGCCCCAGGAGGGATCCTGGCTCTGACATCTCCCAGCCGTGTGGCCTTGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | CACCTGAGTGGATCTCGCTGGGCCTGTGAACCCCTCAGCCACAGGTaGTGTTTCTCCAGGGCCCTCCATGGGGTCCTGGGCTTTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HLSGSRWACEPLSHR*CFSRALHGVLGFPG Trigger: CCCTGGAAAGCCCAGGACCCCATGGAGGGCCCTGGAGAAACAGCACCTGTGGCTGAGGGGTTCACAGGCCCAGCGAGATCCACTCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS CCA 90 bp | CCCTCAGCCACAGGTGCTGTTTCTCCAGGGCCCTCCATGGGGTCCTaGGCTTTCCAGGGCTCCTCATGCCCTAAGCCTACTGAGGACAAG | + |
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Preference number: 5 (lower is better) Translates to: PSATGAVSPGPSMGS*AFQGSSCPKPTEDK Trigger: CTTGTCCTCAGTAGGCTTAGGGCATGAGGAGCCCTGGAAAGCCCAGGACCCCATGGAGGGCCCTGGAGAAACAGCACCTGTGGCTGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS TCA 90 bp | ACCGTTGAAAGACTAAGCTGGGGCTGGGAGCCACGGAGGATTTTCTaGGCACACTGGAAAGCCCGAAGGTCGGCCCAGGGTCTCATGGGG | + |
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Preference number: 5 (lower is better) Translates to: TVERLSWGWEPRRIF*AHWKARRSAQGLMG Trigger: CCCCATGAGACCCTGGGCCGACCTTCGGGCTTTCCAGTGTGCTCAGAAAATCCTCCGTGGCTCCCAGCCCCAGCTTAGTCTTTCAACGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | AGACAGGTGACGCTACCTAGTGTCCTCTGTGCAGAGCGTTCCTCCTaGCACACACTCATCCTCCTGTCAGCCAGTTCCAGCAGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RQVTLPSVLCAERSS*HTLILLSASSSRQL Trigger: CAGCTGCCTGCTGGAACTGGCTGACAGGAGGATGAGTGTGTGGCAGGAGGAACGCTCTGCACAGAGGACACTAGGTAGCGTCACCTGTCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | CACCCCAGCCCACCTGGGGCCTTCCAGAACCCATTCCCTTCCATTTaGCATTTAAACTGGAGGGCAAGGGCTCTCAGAGGAGATGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HPSPPGAFQNPFPSI*HLNWRARALRGDAS Trigger: AGAAGCATCTCCTCTGAGAGCCCTTGCCCTCCAGTTTAAATGGCAAATGGAAGGGAATGGGTTCTGGAAGGCCCCAGGTGGGCTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS TCA 90 bp | CTTGGACAATTCCTTCCCTGTCTCTTGCTTCAGTCCGAGGACCGTTaGAAGACTAAGCTGGGGCTGGGAGCCACGGAGGATTTTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LGQFLPCLLLQSEDR*KTKLGLGATEDFLS Trigger: GCTCAGAAAATCCTCCGTGGCTCCCAGCCCCAGCTTAGTCTTTCAACGGTCCTCGGACTGAAGCAAGAGACAGGGAAGGAATTGTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS TCA 90 bp | GAGTCTGACATTCCATTCCAGTGGAGACACAGGGTAAGAGACAGGTaGCGCTACCTAGTGTCCTCTGTGCAGAGCGTTCCTCCTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: ESDIPFQWRHRVRDR*RYLVSSVQSVPPAT Trigger: TGTGGCAGGAGGAACGCTCTGCACAGAGGACACTAGGTAGCGTCACCTGTCTCTTACCCTGTGTCTCCACTGGAATGGAATGTCAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | TCCTCATGCCCTAAGCCTACTGAGGACAAGCCTCCAGGAGCTAACTaGACACAGTGCTCCCACACTCTGGATAGACAAGGTGTTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SSCPKPTEDKPPGAN*TQCSHTLDRQGVVV Trigger: GACCACAACACCTTGTCTATCCAGAGTGTGGGAGCACTGTGTGCAGTTAGCTCCTGGAGGCTTGTCCTCAGTAGGCTTAGGGCATGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS CCA 90 bp | CGGCCCCAGGGCACCATGACCTTTGAAGCACTTGGTGCTCGGTGTTaGAAAGCAAACCAGAGAAGATGGTCAGTGACGTCTTCATGTGGA | + |
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Preference number: 5 (lower is better) Translates to: RPQGTMTFEALGARC*KANQRRWSVTSSCG Trigger: TCCACATGAAGACGTCACTGACCATCTTCTCTGGTTTGCTTTCCAACACCGAGCACCAAGTGCTTCAAAGGTCATGGTGCCCTGGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000446910.1 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 90 bp | GAACAGGAGTTGGAAGATGGTCTCCAGAACCCACCCCAGCCCACCTaGGGCCTTCCAGAACCCATTCCCTTCCATTTGCCATTTAAACTG | + |
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Preference number: 5 (lower is better) Translates to: EQELEDGLQNPPQPT*GLPEPIPFHLPFKL Trigger: CAGTTTAAATGGCAAATGGAAGGGAATGGGTTCTGGAAGGCCCCAGGTGGGCTGGGGTGGGTTCTGGAGACCATCTTCCAACTCCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 90 bp | GCCAGGCTCCACCATGGTAAGTGTTCTCAGCATGCTGGAAAACCTTaGACAATTCCTTCCCTGTCTCTTGCTTCAGTCCGAGGACCGTTG | + |
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Preference number: 5 (lower is better) Translates to: ARLHHGKCSQHAGKP*TIPSLSLASVRGPL Trigger: CAACGGTCCTCGGACTGAAGCAAGAGACAGGGAAGGAATTGTCCAAGGTTTTCCAGCATGCTGAGAACACTTACCATGGTGGAGCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 90 bp | CCTGGGGCCTTCCAGAACCCATTCCCTTCCATTTGCCATTTAAACTaGAGGGCAAGGGCTCTCAGAGGAGATGCTTCTGGCTACTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PGAFQNPFPSICHLN*RARALRGDASGYLR Trigger: TCTCAAGTAGCCAGAAGCATCTCCTCTGAGAGCCCTTGCCCTCCAGTTTAAATGGCAAATGGAAGGGAATGGGTTCTGGAAGGCCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | TTCTCAGCATGCTGGAAAACCTTGGACAATTCCTTCCCTGTCTCTTaGTTCAGTCCGAGGACCGTTGAAAGACTAAGCTGGGGCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FSACWKTLDNSFPVS*FSPRTVERLSWGWE Trigger: CTCCCAGCCCCAGCTTAGTCTTTCAACGGTCCTCGGACTGAAGCAAGAGACAGGGAAGGAATTGTCCAAGGTTTTCCAGCATGCTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | CTCACTGCTAAGAGGAGGCGTTTTGGCAGGGAAAGGAATGCATGGTaGGAGTCTGACATTCCATTCCAGTGGAGACACAGGGTAAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: LTAKRRRFGRERNAW*ESDIPFQWRHRVRD Trigger: GTCTCTTACCCTGTGTCTCCACTGGAATGGAATGTCAGACTCGCACCATGCATTCCTTTCCCTGCCAAAACGCCTCCTCTTAGCAGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 90 bp | AGGACAAGCCTCCAGGAGCTAACTGCACACAGTGCTCCCACACTCTaGATAGACAAGGTGTTGTGGTCTCTGTCTAGTACCACAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: RTSLQELTAHSAPTL*IDKVLWSLSSTTGH Trigger: ATGACCTGTGGTACTAGACAGAGACCACAACACCTTGTCTATCCAGAGTGTGGGAGCACTGTGTGCAGTTAGCTCCTGGAGGCTTGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS CCA 90 bp | TTTTCTGAGCACACTGGAAAGCCCGAAGGTCGGCCCAGGGTCTCATaGGGAATATTCAAGAAGGTTCAGGGTCCCATGTACCCAGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: FSEHTGKPEGRPRVS*GIFKKVQGPMYPVL Trigger: TAAAACTGGGTACATGGGACCCTGAACCTTCTTGAATATTCCCCATGAGACCCTGGGCCGACCTTCGGGCTTTCCAGTGTGCTCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 90 bp | TTGCTCACTGCTAAGAGGAGGCGTTTTGGCAGGGAAAGGAATGCATaGTGCGAGTCTGACATTCCATTCCAGTGGAGACACAGGGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: LLTAKRRRFGRERNA*CESDIPFQWRHRVR Trigger: TCTTACCCTGTGTCTCCACTGGAATGGAATGTCAGACTCGCACCATGCATTCCTTTCCCTGCCAAAACGCCTCCTCTTAGCAGTGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 90 bp | TTGCCATTTAAACTGGAGGGCAAGGGCTCTCAGAGGAGATGCTTCTaGCTACTTGAGACCAATACACATGCATCAAAGAGCCAGTACGTG | + |
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Preference number: 5 (lower is better) Translates to: LPFKLEGKGSQRRCF*LLETNTHASKSQYV Trigger: CACGTACTGGCTCTTTGATGCATGTGTATTGGTCTCAAGTAGCCAGAAGCATCTCCTCTGAGAGCCCTTGCCCTCCAGTTTAAATGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | TTCCATTTGCCATTTAAACTGGAGGGCAAGGGCTCTCAGAGGAGATaGTTCTGGCTACTTGAGACCAATACACATGCATCAAAGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: FHLPFKLEGKGSQRR*FWLLETNTHASKSQ Trigger: CTGGCTCTTTGATGCATGTGTATTGGTCTCAAGTAGCCAGAAGCATCTCCTCTGAGAGCCCTTGCCCTCCAGTTTAAATGGCAAATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | TCTTGCCAAATGGGCTTTTGGCTTCATCCACTCGAACAACTTTCTTaGTCACTGCTAAGAGGAGGCGTTTTGGCAGGGAAAGGAATGCAT | + |
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Preference number: 5 (lower is better) Translates to: SCQMGFWLHPLEQLS*SLLRGGVLAGKGMH Trigger: ATGCATTCCTTTCCCTGCCAAAACGCCTCCTCTTAGCAGTGAGCAAGAAAGTTGTTCGAGTGGATGAAGCCAAAAGCCCATTTGGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 90 bp | CGTTTCTTCCACTCTGTTCTCCAGGATTTTCATTCCTTGGCCAGTTaGTTCCGGGAATTTATTCCCTTGTCTGGAAATACCATCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RFFHSVLQDFHSLAS*FREFIPLSGNTISL Trigger: CAGAGAGATGGTATTTCCAGACAAGGGAATAAATTCCCGGAAGCAACTGGCCAAGGAATGAAAATCCTGGAGAACAGAGTGGAAGAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441268.2 ENST00000654244.1 |
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| CDS CCA 90 bp | GCGGGAGGTCAGTGTTTAGGGAGGAAAGAAAATCAACAGGAAATGTaGAATACGCGTTTCTTCCACTCTGTTCTCCAGGATTTTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: AGGQCLGRKENQQEM*NTRFFHSVLQDFHS Trigger: GGAATGAAAATCCTGGAGAACAGAGTGGAAGAAACGCGTATTCCACATTTCCTGTTGATTTTCTTTCCTCCCTAAACACTGACCTCCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 |
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| CDS CCA 90 bp | GGAATACGCGTTTCTTCCACTCTGTTCTCCAGGATTTTCATTCCTTaGCCAGTTGCTTCCGGGAATTTATTCCCTTGTCTGGAAATACCA | + |
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Preference number: 5 (lower is better) Translates to: GIRVSSTLFSRIFIP*PVASGNLFPCLEIP Trigger: TGGTATTTCCAGACAAGGGAATAAATTCCCGGAAGCAACTGGCCAAGGAATGAAAATCCTGGAGAACAGAGTGGAAGAAACGCGTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441268.2 ENST00000654244.1 |
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| CDS TCA 90 bp | CCTACGATTGTTTTCAGGGGTTTCAGCTCGACTACTTTAATGCAATaGCAGTGTCACATTTATATCCTGGAACCCATCCAGATGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PTIVFRGFSSTTLMQ*QCHIYILEPIQMLW Trigger: CCAGAGCATCTGGATGGGTTCCAGGATATAAATGTGACACTGTCATTGCATTAAAGTAGTCGAGCTGAAACCCCTGAAAACAATCGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435493.2 |
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| CDS GCA 90 bp | GGTCCCATGTACCCAGTTTTACCGCTGTTGGTTACCACTAACATTTaGTTTGTGGGCCATTTCAATATTTATTTGGTTATAAATGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: GPMYPVLPLLVTTNI*FVGHFNIYLVINAH Trigger: GTGGGCATTTATAACCAAATAAATATTGAAATGGCCCACAAAGCAAATGTTAGTGGTAACCAACAGCGGTAAAACTGGGTACATGGGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 90 bp | TATTCAAGAAGGTTCAGGGTCCCATGTACCCAGTTTTACCGCTGTTaGTTACCACTAACATTTGCTTTGTGGGCCATTTCAATATTTATT | + |
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Preference number: 5 (lower is better) Translates to: YSRRFRVPCTQFYRC*LPLTFALWAISIFI Trigger: AATAAATATTGAAATGGCCCACAAAGCAAATGTTAGTGGTAACCAACAGCGGTAAAACTGGGTACATGGGACCCTGAACCTTCTTGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 72 bp | TGTGGGCTTCCCCCGCACATGGTGCTCTCCCTCCTGTaGCCGCACCTGCCCGTATCTCGCCCCTCCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: CGLPPHMVLSLL*PHLPVSRPSRA Trigger: GGCTCTGGAGGGGCGAGATACGGGCAGGTGCGGCCACAGGAGGGAGAGCACCATGTGCGGGGGAAGCCCACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 72 bp | GGATCTCGCTGGGCCTGTGAACCCCTCAGCCACAGGTaGTGTTTCTCCAGGGCCCTCCATGGGGTCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GSRWACEPLSHR*CFSRALHGVLG Trigger: GCCCAGGACCCCATGGAGGGCCCTGGAGAAACAGCACCTGTGGCTGAGGGGTTCACAGGCCCAGCGAGATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS CCA 72 bp | GGTCCAAGTCAGGGACCTTGCCCAAGGCCACACGGCTaGGAGATGTCAGAGCCAGGATCCCTCCTGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GPSQGPCPRPHG*EMSEPGSLLGP Trigger: AGGCCCCAGGAGGGATCCTGGCTCTGACATCTCCCAGCCGTGTGGCCTTGGGCAAGGTCCCTGACTTGGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS TCA 72 bp | CAGGTGACCTCACCTGAGTGGATCTCGCTGGGCCTGTaGACCCCTCAGCCACAGGTGCTGTTTCTCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: QVTSPEWISLGL*TPQPQVLFLQG Trigger: GCCCTGGAGAAACAGCACCTGTGGCTGAGGGGTTCACAGGCCCAGCGAGATCCACTCAGGTGAGGTCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS GCA 72 bp | CCCTCCATGGGGTCCTGGGCTTTCCAGGGCTCCTCATaGCCTAAGCCTACTGAGGACAAGCCTCCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PSMGSWAFQGSS*PKPTEDKPPGA Trigger: AGCTCCTGGAGGCTTGTCCTCAGTAGGCTTAGGGCATGAGGAGCCCTGGAAAGCCCAGGACCCCATGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS CAA 90 bp | GGTGGCCACAGAGCTGATCTGACCAACCCTCCTCCTGAACAGGAGTaGGAAGATGGTCTCCAGAACCCACCCCAGCCCACCTGGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GGHRADLTNPPPEQE*EDGLQNPPQPTWGL Trigger: AAGGCCCCAGGTGGGCTGGGGTGGGTTCTGGAGACCATCTTCCAACTCCTGTTCAGGAGGAGGGTTGGTCAGATCAGCTCTGTGGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS TCA 72 bp | AGACTAAGCTGGGGCTGGGAGCCACGGAGGATTTTCTaGGCACACTGGAAAGCCCGAAGGTCGGCCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: RLSWGWEPRRIF*AHWKARRSAQG Trigger: ACCCTGGGCCGACCTTCGGGCTTTCCAGTGTGCTCAGAAAATCCTCCGTGGCTCCCAGCCCCAGCTTAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 90 bp | CCACCCCAGCCCACCTGGGGCCTTCCAGAACCCATTCCCTTCCATTaGCCATTTAAACTGGAGGGCAAGGGCTCTCAGAGGAGATGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PPQPTWGLPEPIPFH*PFKLEGKGSQRRCF Trigger: GAAGCATCTCCTCTGAGAGCCCTTGCCCTCCAGTTTAAATGGCAAATGGAAGGGAATGGGTTCTGGAAGGCCCCAGGTGGGCTGGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 72 bp | ACGCTACCTAGTGTCCTCTGTGCAGAGCGTTCCTCCTaGCACACACTCATCCTCCTGTCAGCCAGTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLPSVLCAERSS*HTLILLSASSS Trigger: GCTGGAACTGGCTGACAGGAGGATGAGTGTGTGGCAGGAGGAACGCTCTGCACAGAGGACACTAGGTAGCGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 72 bp | AGAGCTGATCTGACCAACCCTCCTCCTGAACAGGAGTaGGAAGATGGTCTCCAGAACCCACCCCAGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: RADLTNPPPEQE*EDGLQNPPQPT Trigger: GGTGGGCTGGGGTGGGTTCTGGAGACCATCTTCCAACTCCTGTTCAGGAGGAGGGTTGGTCAGATCAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS TCA 72 bp | TTCCTTCCCTGTCTCTTGCTTCAGTCCGAGGACCGTTaGAAGACTAAGCTGGGGCTGGGAGCCACGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: FLPCLLLQSEDR*KTKLGLGATED Trigger: ATCCTCCGTGGCTCCCAGCCCCAGCTTAGTCTTTCAACGGTCCTCGGACTGAAGCAAGAGACAGGGAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 72 bp | CCACCTGGGGCCTTCCAGAACCCATTCCCTTCCATTTaGCATTTAAACTGGAGGGCAAGGGCTCTCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PPGAFQNPFPSI*HLNWRARALRG Trigger: TCCTCTGAGAGCCCTTGCCCTCCAGTTTAAATGGCAAATGGAAGGGAATGGGTTCTGGAAGGCCCCAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 72 bp | CACACTGGAAAGCCCGAAGGTCGGCCCAGGGTCTCATaGGGAATATTCAAGAAGGTTCAGGGTCCCATGTAC | + |
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Preference number: 6 (lower is better) Translates to: HTGKPEGRPRVS*GIFKKVQGPMY Trigger: GTACATGGGACCCTGAACCTTCTTGAATATTCCCCATGAGACCCTGGGCCGACCTTCGGGCTTTCCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 72 bp | AAGAGGAGGCGTTTTGGCAGGGAAAGGAATGCATGGTaGGAGTCTGACATTCCATTCCAGTGGAGACACAGG | + |
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Preference number: 6 (lower is better) Translates to: KRRRFGRERNAW*ESDIPFQWRHR Trigger: CCTGTGTCTCCACTGGAATGGAATGTCAGACTCGCACCATGCATTCCTTTCCCTGCCAAAACGCCTCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 72 bp | TGTCACATTTATATCCTGGAACCCATCCAGATGCTCTaGAGGCCAGAACACCCTGCTAGTGAAGACTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: CHIYILEPIQML*RPEHPASEDCG Trigger: CCCGCAGTCTTCACTAGCAGGGTGTTCTGGCCTCCAGAGCATCTGGATGGGTTCCAGGATATAAATGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435493.2 |
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| CDS CCA 72 bp | GCTAAGAGGAGGCGTTTTGGCAGGGAAAGGAATGCATaGTGCGAGTCTGACATTCCATTCCAGTGGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: AKRRRFGRERNA*CESDIPFQWRH Trigger: GTGTCTCCACTGGAATGGAATGTCAGACTCGCACCATGCATTCCTTTCCCTGCCAAAACGCCTCCTCTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 72 bp | CACAGTGCTCCCACACTCTGGATAGACAAGGTGTTGTaGTCTCTGTCTAGTACCACAGGTCATGAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: HSAPTLWIDKVL*SLSSTTGHEAE Trigger: CTCAGCCTCATGACCTGTGGTACTAGACAGAGACCACAACACCTTGTCTATCCAGAGTGTGGGAGCACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS CCA 72 bp | CTCCAGGAGCTAACTGCACACAGTGCTCCCACACTCTaGATAGACAAGGTGTTGTGGTCTCTGTCTAGTACC | + |
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Preference number: 6 (lower is better) Translates to: LQELTAHSAPTL*IDKVLWSLSST Trigger: GGTACTAGACAGAGACCACAACACCTTGTCTATCCAGAGTGTGGGAGCACTGTGTGCAGTTAGCTCCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS CAA 72 bp | GCACACAGTGCTCCCACACTCTGGATAGACAAGGTGTaGTGGTCTCTGTCTAGTACCACAGGTCATGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AHSAPTLWIDKV*WSLSSTTGHEA Trigger: AGCCTCATGACCTGTGGTACTAGACAGAGACCACAACACCTTGTCTATCCAGAGTGTGGGAGCACTGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS CAA 90 bp | TTAAACTGGAGGGCAAGGGCTCTCAGAGGAGATGCTTCTGGCTACTaGAGACCAATACACATGCATCAAAGAGCCAGTACGTGCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LNWRARALRGDASGY*RPIHMHQRASTCQA Trigger: AGCCTGGCACGTACTGGCTCTTTGATGCATGTGTATTGGTCTCAAGTAGCCAGAAGCATCTCCTCTGAGAGCCCTTGCCCTCCAGTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 90 bp | GAGCTAACTGCACACAGTGCTCCCACACTCTGGATAGACAAGGTGTaGTGGTCTCTGTCTAGTACCACAGGTCATGAGGCTGAGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: ELTAHSAPTLWIDKV*WSLSSTTGHEAETV Trigger: AACTGTCTCAGCCTCATGACCTGTGGTACTAGACAGAGACCACAACACCTTGTCTATCCAGAGTGTGGGAGCACTGTGTGCAGTTAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446910.1 ENST00000660097.1 |
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| CDS TCA 72 bp | GCGTTTTGGCAGGGAAAGGAATGCATGGTGCGAGTCTaGCATTCCATTCCAGTGGAGACACAGGGTAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: AFWQGKECMVRV*HSIPVETQGKR Trigger: TCTCTTACCCTGTGTCTCCACTGGAATGGAATGTCAGACTCGCACCATGCATTCCTTTCCCTGCCAAAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 72 bp | AGGGCAAGGGCTCTCAGAGGAGATGCTTCTGGCTACTaGAGACCAATACACATGCATCAAAGAGCCAGTACG | + |
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Preference number: 6 (lower is better) Translates to: RARALRGDASGY*RPIHMHQRAST Trigger: CGTACTGGCTCTTTGATGCATGTGTATTGGTCTCAAGTAGCCAGAAGCATCTCCTCTGAGAGCCCTTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 90 bp | CACTTCTGGAAAGAAAGCAGGACGGGAAAAAGAGAGCTCCACGTCTaGAATATAATCAGGGACTCGGGACTCCGCAGCATGACCTCTACA | + |
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Preference number: 6 (lower is better) Translates to: HFWKESRTGKRELHV*NIIRDSGLRSMTST Trigger: TGTAGAGGTCATGCTGCGGAGTCCCGAGTCCCTGATTATATTCAAGACGTGGAGCTCTCTTTTTCCCGTCCTGCTTTCTTTCCAGAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000446910.1 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 72 bp | AAAGAAAGCAGGACGGGAAAAAGAGAGCTCCACGTCTaGAATATAATCAGGGACTCGGGACTCCGCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: KESRTGKRELHV*NIIRDSGLRSM Trigger: CATGCTGCGGAGTCCCGAGTCCCTGATTATATTCAAGACGTGGAGCTCTCTTTTTCCCGTCCTGCTTTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000446910.1 ENST00000654244.1 ENST00000660097.1 |
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| CDS GCA 72 bp | ATGGGCTTTTGGCTTCATCCACTCGAACAACTTTCTTaGTCACTGCTAAGAGGAGGCGTTTTGGCAGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: MGFWLHPLEQLS*SLLRGGVLAGK Trigger: TTTCCCTGCCAAAACGCCTCCTCTTAGCAGTGAGCAAGAAAGTTGTTCGAGTGGATGAAGCCAAAAGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS TCA 72 bp | TCCTGGGCCCTAGACCAGTGTCTGGCTAGCGCATGTTaGATAAGTCATTCAATCAATCAATCAGTCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: SWALDQCLASAC*ISHSINQSVNW Trigger: CCAGTTGACTGATTGATTGATTGAATGACTTATTCAACATGCGCTAGCCAGACACTGGTCTAGGGCCCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441268.2 ENST00000654244.1 |
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| CDS GCA 72 bp | TGGCTTAAAAAGGAGTTTGAGAAAATCTTGTCCATCTaGTGCCCAGCCTTCACTCTGCTGAGCATTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: WLKKEFEKILSI*CPAFTLLSIAQ Trigger: CTGAGCAATGCTCAGCAGAGTGAAGGCTGGGCAGCAGATGGACAAGATTTTCTCAAACTCCTTTTTAAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 72 bp | AGGTTCAGGGTCCCATGTACCCAGTTTTACCGCTGTTaGTTACCACTAACATTTGCTTTGTGGGCCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: RFRVPCTQFYRC*LPLTFALWAIS Trigger: TGAAATGGCCCACAAAGCAAATGTTAGTGGTAACCAACAGCGGTAAAACTGGGTACATGGGACCCTGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 72 bp | AAGGTTCAGGGTCCCATGTACCCAGTTTTACCGCTGTaGGTTACCACTAACATTTGCTTTGTGGGCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: KVQGPMYPVLPL*VTTNICFVGHF Trigger: GAAATGGCCCACAAAGCAAATGTTAGTGGTAACCAACAGCGGTAAAACTGGGTACATGGGACCCTGAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 90 bp | GCGTTTCTTCCACTCTGTTCTCCAGGATTTTCATTCCTTGGCCAGTaGCTTCCGGGAATTTATTCCCTTGTCTGGAAATACCATCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: AFLPLCSPGFSFLGQ*LPGIYSLVWKYHLS Trigger: AGAGAGATGGTATTTCCAGACAAGGGAATAAATTCCCGGAAGCAACTGGCCAAGGAATGAAAATCCTGGAGAACAGAGTGGAAGAAACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441268.2 ENST00000654244.1 |
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| CDS CAA 90 bp | TGGAATACGCGTTTCTTCCACTCTGTTCTCCAGGATTTTCATTCCTaGGCCAGTTGCTTCCGGGAATTTATTCCCTTGTCTGGAAATACC | + |
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Preference number: 6 (lower is better) Translates to: WNTRFFHSVLQDFHS*ASCFREFIPLSGNT Trigger: GGTATTTCCAGACAAGGGAATAAATTCCCGGAAGCAACTGGCCAAGGAATGAAAATCCTGGAGAACAGAGTGGAAGAAACGCGTATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441268.2 ENST00000654244.1 |
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| CDS GCA 72 bp | CTTAAAAAGGAGTTTGAGAAAATCTTGTCCATCTGCTaGCCAGCCTTCACTCTGCTGAGCATTGCTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LKKEFEKILSIC*PAFTLLSIAQS Trigger: TGACTGAGCAATGCTCAGCAGAGTGAAGGCTGGGCAGCAGATGGACAAGATTTTCTCAAACTCCTTTTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CCA 72 bp | GTTTCTTCCACTCTGTTCTCCAGGATTTTCATTCCTTaGCCAGTTGCTTCCGGGAATTTATTCCCTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: VSSTLFSRIFIP*PVASGNLFPCL Trigger: CAGACAAGGGAATAAATTCCCGGAAGCAACTGGCCAAGGAATGAAAATCCTGGAGAACAGAGTGGAAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441268.2 ENST00000654244.1 |
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| CDS CAA 72 bp | CGTTTCTTCCACTCTGTTCTCCAGGATTTTCATTCCTaGGCCAGTTGCTTCCGGGAATTTATTCCCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RFFHSVLQDFHS*ASCFREFIPLS Trigger: AGACAAGGGAATAAATTCCCGGAAGCAACTGGCCAAGGAATGAAAATCCTGGAGAACAGAGTGGAAGAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441268.2 ENST00000654244.1 |
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| CDS CAA 72 bp | GCATTTTCCAAAACAGCACTCTTGCCAAATGGGCTTTaGGCTTCATCCACTCGAACAACTTTCTTGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: AFSKTALLPNGL*ASSTRTTFLLT Trigger: AGTGAGCAAGAAAGTTGTTCGAGTGGATGAAGCCAAAAGCCCATTTGGCAAGAGTGCTGTTTTGGAAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 72 bp | CATTCCTTGGCCAGTTGCTTCCGGGAATTTATTCCCTaGTCTGGAAATACCATCTCTCTGTTGTTCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: HSLASCFREFIP*SGNTISLLFLE Trigger: TTCAAGGAACAACAGAGAGATGGTATTTCCAGACAAGGGAATAAATTCCCGGAAGCAACTGGCCAAGGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441268.2 ENST00000654244.1 |
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| CDS CAA 90 bp | TTGGTTACCACTAACATTTGCTTTGTGGGCCATTTCAATATTTATTaGGTTATAAATGCCCACATAAGTAGCTCTCGGCCCCAGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: LVTTNICFVGHFNIY*VINAHISSSRPQGT Trigger: GGTGCCCTGGGGCCGAGAGCTACTTATGTGGGCATTTATAACCAAATAAATATTGAAATGGCCCACAAAGCAAATGTTAGTGGTAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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| CDS CAA 90 bp | CAGGATTTTCATTCCTTGGCCAGTTGCTTCCGGGAATTTATTCCCTaGTCTGGAAATACCATCTCTCTGTTGTTCCTTGAAAACAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: QDFHSLASCFREFIP*SGNTISLLFLENKE Trigger: TTCTTTGTTTTCAAGGAACAACAGAGAGATGGTATTTCCAGACAAGGGAATAAATTCCCGGAAGCAACTGGCCAAGGAATGAAAATCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654244.1 |
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| CDS CAA 90 bp | ATATTCAAGAAGGTTCAGGGTCCCATGTACCCAGTTTTACCGCTGTaGGTTACCACTAACATTTGCTTTGTGGGCCATTTCAATATTTAT | + |
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Preference number: 6 (lower is better) Translates to: IFKKVQGPMYPVLPL*VTTNICFVGHFNIY Trigger: ATAAATATTGAAATGGCCCACAAAGCAAATGTTAGTGGTAACCAACAGCGGTAAAACTGGGTACATGGGACCCTGAACCTTCTTGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435493.2 ENST00000441268.2 ENST00000654244.1 ENST00000660097.1 |
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