Pregenerated sensors for LINC00322 (Homo sapiens)
Ensembl gene IDs: ENSG00000237864Ensembl transcript IDs: ENST00000450205.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGTGGCGGGGGCTCGCATGGGGACCCACCACTGCGGCTCCACACTaGAAGCAGAGCCCTGGGCCCAGCCAGAAACCAAGCAGAGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: QWRGLAWGPTTAAPH*KQSPGPSQKPSRGH Trigger: ATGGCCTCTGCTTGGTTTCTGGCTGGGCCCAGGGCTCTGCTTGCAGTGTGGAGCCGCAGTGGTGGGTCCCCATGCGAGCCCCCGCCACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CCA 90 bp | TGGGCCTGGAGTTGTCCGAGGACACAAAGCTGGTTTGCGGAGGGCTaGCCTGGGGCGCAGGGCTCCTGGTGCCTGGTTCAGAGCCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: WAWSCPRTQSWFAEG*PGAQGSWCLVQSLS Trigger: TGAAAGGCTCTGAACCAGGCACCAGGAGCCCTGCGCCCCAGGCCAGCCCTCCGCAAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CCA 90 bp | GGCCGGCTTCCTCCTCTCTCCAGACAGCAAGACCCAGGATGGGCCTaGAGTTGTCCGAGGACACAAAGCTGGTTTGCGGAGGGCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: GRLPPLSRQQDPGWA*SCPRTQSWFAEGWP Trigger: AGGCCAGCCCTCCGCAAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCATCCTGGGTCTTGCTGTCTGGAGAGAGGAGGAAGCCGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS TCA 90 bp | CCTGGTGCCTGGTTCAGAGCCTTTCAACCCCCGTGTTGCCACACCTaGGCCAGTGCGACACTCAGCTGCAGTGGCCAGACTGTGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PGAWFRAFQPPCCHT*ASATLSCSGQTVSP Trigger: TGGGCTCACAGTCTGGCCACTGCAGCTGAGTGTCGCACTGGCTCAGGTGTGGCAACACGGGGGTTGAAAGGCTCTGAACCAGGCACCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CCA 90 bp | GAGTGTGGCCGGCTTCCTCCTCTCTCCAGACAGCAAGACCCAGGATaGGCCTGGAGTTGTCCGAGGACACAAAGCTGGTTTGCGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: ECGRLPPLSRQQDPG*AWSCPRTQSWFAEG Trigger: GCCCTCCGCAAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCATCCTGGGTCTTGCTGTCTGGAGAGAGGAGGAAGCCGGCCACACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS TCA 90 bp | CTGGGCCCAGCCAGAAACCAAGCAGAGGCCATGCAGTGCGGAGGCTaGATGTTCTTGGAGAGTGTGGCCGGCTTCCTCCTCTCTCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: LGPARNQAEAMQCGG*MFLESVAGFLLSPD Trigger: GTCTGGAGAGAGGAGGAAGCCGGCCACACTCTCCAAGAACATTCAGCCTCCGCACTGCATGGCCTCTGCTTGGTTTCTGGCTGGGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS GCA 90 bp | CTGGTTCAGAGCCTTTCAACCCCCGTGTTGCCACACCTGAGCCAGTaGGACACTCAGCTGCAGTGGCCAGACTGTGAGCCCAGGGTCATC | + |
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Preference number: 5 (lower is better) Translates to: LVQSLSTPVLPHLSQ*DTQLQWPDCEPRVI Trigger: GATGACCCTGGGCTCACAGTCTGGCCACTGCAGCTGAGTGTCGCACTGGCTCAGGTGTGGCAACACGGGGGTTGAAAGGCTCTGAACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CCA 90 bp | AAGCAGAGGCCATGCAGTGCGGAGGCTGAATGTTCTTGGAGAGTGTaGCCGGCTTCCTCCTCTCTCCAGACAGCAAGACCCAGGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: KQRPCSAEAECSWRV*PASSSLQTARPRMG Trigger: GCCCATCCTGGGTCTTGCTGTCTGGAGAGAGGAGGAAGCCGGCCACACTCTCCAAGAACATTCAGCCTCCGCACTGCATGGCCTCTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CCA 90 bp | CCAGAAACCAAGCAGAGGCCATGCAGTGCGGAGGCTGAATGTTCTTaGAGAGTGTGGCCGGCTTCCTCCTCTCTCCAGACAGCAAGACCC | + |
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Preference number: 5 (lower is better) Translates to: PETKQRPCSAEAECS*RVWPASSSLQTARP Trigger: GGGTCTTGCTGTCTGGAGAGAGGAGGAAGCCGGCCACACTCTCCAAGAACATTCAGCCTCCGCACTGCATGGCCTCTGCTTGGTTTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CAA 90 bp | GCGCAGGGCTCCTGGTGCCTGGTTCAGAGCCTTTCAACCCCCGTGTaGCCACACCTGAGCCAGTGCGACACTCAGCTGCAGTGGCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: AQGSWCLVQSLSTPV*PHLSQCDTQLQWPD Trigger: GTCTGGCCACTGCAGCTGAGTGTCGCACTGGCTCAGGTGTGGCAACACGGGGGTTGAAAGGCTCTGAACCAGGCACCAGGAGCCCTGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CAA 90 bp | GCTTCCTCCTCTCTCCAGACAGCAAGACCCAGGATGGGCCTGGAGTaGTCCGAGGACACAAAGCTGGTTTGCGGAGGGCTGGCCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ASSSLQTARPRMGLE*SEDTKLVCGGLAWG Trigger: GCCCCAGGCCAGCCCTCCGCAAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCATCCTGGGTCTTGCTGTCTGGAGAGAGGAGGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS TCA 72 bp | GCCCAGGGTCATCGCGAGGCAGACGCCAAGACAGGATaGAGGGCAGGAGGATTTCATCGGGGGATCACCAGT | + |
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Preference number: 6 (lower is better) Translates to: AQGHREADAKTG*RAGGFHRGITS Trigger: ACTGGTGATCCCCCGATGAAATCCTCCTGCCCTTCATCCTGTCTTGGCGTCTGCCTCGCGATGACCCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CAA 72 bp | TCCTGGTGCCTGGTTCAGAGCCTTTCAACCCCCGTGTaGCCACACCTGAGCCAGTGCGACACTCAGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SWCLVQSLSTPV*PHLSQCDTQLQ Trigger: CTGCAGCTGAGTGTCGCACTGGCTCAGGTGTGGCAACACGGGGGTTGAAAGGCTCTGAACCAGGCACCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS TCA 72 bp | TGGTTCAGAGCCTTTCAACCCCCGTGTTGCCACACCTaGGCCAGTGCGACACTCAGCTGCAGTGGCCAGACT | + |
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Preference number: 6 (lower is better) Translates to: WFRAFQPPCCHT*ASATLSCSGQT Trigger: AGTCTGGCCACTGCAGCTGAGTGTCGCACTGGCTCAGGTGTGGCAACACGGGGGTTGAAAGGCTCTGAACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS TCA 72 bp | GCCAGAAACCAAGCAGAGGCCATGCAGTGCGGAGGCTaGATGTTCTTGGAGAGTGTGGCCGGCTTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ARNQAEAMQCGG*MFLESVAGFLL Trigger: GAGGAGGAAGCCGGCCACACTCTCCAAGAACATTCAGCCTCCGCACTGCATGGCCTCTGCTTGGTTTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CCA 72 bp | CCTCCTCTCTCCAGACAGCAAGACCCAGGATGGGCCTaGAGTTGTCCGAGGACACAAAGCTGGTTTGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PPLSRQQDPGWA*SCPRTQSWFAE Trigger: CTCCGCAAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCATCCTGGGTCTTGCTGTCTGGAGAGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CCA 72 bp | CCATGCAGTGCGGAGGCTGAATGTTCTTGGAGAGTGTaGCCGGCTTCCTCCTCTCTCCAGACAGCAAGACCC | + |
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Preference number: 6 (lower is better) Translates to: PCSAEAECSWRV*PASSSLQTARP Trigger: GGGTCTTGCTGTCTGGAGAGAGGAGGAAGCCGGCCACACTCTCCAAGAACATTCAGCCTCCGCACTGCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CAA 72 bp | TCTCTCCAGACAGCAAGACCCAGGATGGGCCTGGAGTaGTCCGAGGACACAAAGCTGGTTTGCGGAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLQTARPRMGLE*SEDTKLVCGGL Trigger: CAGCCCTCCGCAAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCATCCTGGGTCTTGCTGTCTGGAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CCA 72 bp | CGGCTTCCTCCTCTCTCCAGACAGCAAGACCCAGGATaGGCCTGGAGTTGTCCGAGGACACAAAGCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RLPPLSRQQDPG*AWSCPRTQSWF Trigger: AAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCATCCTGGGTCTTGCTGTCTGGAGAGAGGAGGAAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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| CDS CAA 72 bp | CATCTAATTCAGACTCTAAGCTCAATCCTGCCTGTGTaGGCTTCATTCTCAGGGAAAGACGGCCCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: HLIQTLSSILPV*ASFSGKDGPGA Trigger: AGCTCCTGGGCCGTCTTTCCCTGAGAATGAAGCCAACACAGGCAGGATTGAGCTTAGAGTCTGAATTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450205.1 |
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