Pregenerated sensors for LINC00315 (Homo sapiens)
Ensembl gene IDs: ENSG00000184274Ensembl transcript IDs: ENST00000441947.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCTTGCCAGGGGTGTTCCCGGCAGAGGGAGGAGAGCATCACCCTTaGGCCAACACCGCCACCAGCAGCGGCCGGACCATGGAGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: SLPGVFPAEGGEHHP*ANTATSSGRTMELS Trigger: GCTCAGCTCCATGGTCCGGCCGCTGCTGGTGGCGGTGTTGGCCCAAGGGTGATGCTCTCCTCCCTCTGCCGGGAACACCCCTGGCAAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 90 bp | GCTGTGGCCCTGGGGACGCCACCACTGGCCTCACACCGTGGAGCGTaGATAGGCCGCTCTGGCCTGTCTGCAGGGGAAATGGCTGTCACT | + |
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Preference number: 5 (lower is better) Translates to: AVALGTPPLASHRGA*IGRSGLSAGEMAVT Trigger: AGTGACAGCCATTTCCCCTGCAGACAGGCCAGAGCGGCCTATCCACGCTCCACGGTGTGAGGCCAGTGGTGGCGTCCCCAGGGCCACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 90 bp | TGCCTCACCTCCTTTCCATGTGCGGGGATGGGTGGGCAGCGTCCTTaGCAGGGGTGTTCCCGGCAGAGGGAGGAGAGCATCACCCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: CLTSFPCAGMGGQRP*QGCSRQREESITLG Trigger: CCCAAGGGTGATGCTCTCCTCCCTCTGCCGGGAACACCCCTGGCAAGGACGCTGCCCACCCATCCCCGCACATGGAAAGGAGGTGAGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 90 bp | GGCTCTGTCTGGTGTCTGACGTGGGAAGGACGTGCTGGAAGCCCATaGGTGTGTGGGAGGCCCGGGCCTCGAGCCATGTCTTGGTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: GSVWCLTWEGRAGSP*VCGRPGPRAMSWCV Trigger: CACGCACCAAGACATGGCTCGAGGCCCGGGCCTCCCACACACCCATGGGCTTCCAGCACGTCCTTCCCACGTCAGACACCAGACAGAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 90 bp | GTCACAGGTACCTTCTTACAGCAGCACAAAGGGGCCACGGCAGCCTaGGACCGCCCAGCCCCACCATGCTTCCTGCAGATGCGAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: VTGTFLQQHKGATAA*DRPAPPCFLQMRAA Trigger: GGCTGCTCGCATCTGCAGGAAGCATGGTGGGGCTGGGCGGTCCCAGGCTGCCGTGGCCCCTTTGTGCTGCTGTAAGAAGGTACCTGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 90 bp | GAAGGTGATAGGCACCCAGCCACATGCTCCGTGCCCACAGATCCCTaGGGCCAGCCAAGCTGCAGGTGCCCTCCCTCAGGTGAGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: EGDRHPATCSVPTDP*GQPSCRCPPSGESP Trigger: TGGACTCTCACCTGAGGGAGGGCACCTGCAGCTTGGCTGGCCCCAGGGATCTGTGGGCACGGAGCATGTGGCTGGGTGCCTATCACCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 90 bp | AGTCTCCAGGGAAGCCGGCATTCGGGGCACACGGAGGTCCTGCCTTaGTGCCCAGCCTTGGGACACCCCACAGTGAATGCCTCCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SLQGSRHSGHTEVLP*CPALGHPTVNASSP Trigger: TGGAGAGGAGGCATTCACTGTGGGGTGTCCCAAGGCTGGGCACCAAGGCAGGACCTCCGTGTGCCCCGAATGCCGGCTTCCCTGGAGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 90 bp | GGTAAAGTGGGGAAGAAGGTGATAGGCACCCAGCCACATGCTCCGTaGCCACAGATCCCTGGGGCCAGCCAAGCTGCAGGTGCCCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: GKVGKKVIGTQPHAP*PQIPGASQAAGALP Trigger: AGGGAGGGCACCTGCAGCTTGGCTGGCCCCAGGGATCTGTGGGCACGGAGCATGTGGCTGGGTGCCTATCACCTTCTTCCCCACTTTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS TCA 90 bp | ACACGGAGGTCCTGCCTTGGTGCCCAGCCTTGGGACACCCCACAGTaGATGCCTCCTCTCCACGGTCTCCATGTCCCTGAGCTCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: TRRSCLGAQPWDTPQ*MPPLHGLHVPELLL Trigger: AAGCAGGAGCTCAGGGACATGGAGACCGTGGAGAGGAGGCATTCACTGTGGGGTGTCCCAAGGCTGGGCACCAAGGCAGGACCTCCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 90 bp | GCCGTGGTGTGGGTGAATTTCATCATGCTGACACTCCTCCACACCTaGTCCGTGCCTGGCAGTCATGGTCCAGGGGCTGGATGCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: AVVWVNFIMLTLLHT*SVPGSHGPGAGCPG Trigger: CCCTGGGCATCCAGCCCCTGGACCATGACTGCCAGGCACGGAGCAGGTGTGGAGGAGTGTCAGCATGATGAAATTCACCCACACCACGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS TCA 90 bp | CACAGATCCCTGGGGCCAGCCAAGCTGCAGGTGCCCTCCCTCAGGTaGGAGTCCACTCGGCCTTGTGATTCCTACAGAATAGCCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: HRSLGPAKLQVPSLR*ESTRPCDSYRIALL Trigger: GAGAAGGGCTATTCTGTAGGAATCACAAGGCCGAGTGGACTCTCACCTGAGGGAGGGCACCTGCAGCTTGGCTGGCCCCAGGGATCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 90 bp | GGACCACCTTGGAAGCAGAGAGCAGTCCTCGCCAAACACCAAACCTaGCGGGGCCCTGGTTTCAGACTTCCCAGACTCCAGAGCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: GPPWKQRAVLAKHQT*RGPGFRLPRLQSCE Trigger: CTCACAGCTCTGGAGTCTGGGAAGTCTGAAACCAGGGCCCCGGCAGGTTTGGTGTTTGGCGAGGACTGCTCTCTGCTTCCAAGGTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS TCA 90 bp | GGCACTGCTGTGGTTTCAATGTCTGTGTTCCTCCGAAATCCATGTTaGAACTTAATCCCCAGCGCAACAGTGTTCAGAGGTGAGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GTAVVSMSVFLRNPC*NLIPSATVFRGEAF Trigger: GAAGGCCTCACCTCTGAACACTGTTGCGCTGGGGATTAAGTTTCAACATGGATTTCGGAGGAACACAGACATTGAAACCACAGCAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | GCCTGGCCAGCAGGCGTCCGGGAGTCAGCGGCTGCTTaGGGAACCAGGGCCCCACTCACACGCGGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: AWPAGVRESAAA*GTRAPLTRGKV Trigger: CACCTTCCCGCGTGTGAGTGGGGCCCTGGTTCCCCAAGCAGCCGCTGACTCCCGGACGCCTGCTGGCCAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CAA 72 bp | GGCCTGGCCAGCAGGCGTCCGGGAGTCAGCGGCTGCTaGGGGAACCAGGGCCCCACTCACACGCGGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: GLASRRPGVSGC*GNQGPTHTREG Trigger: ACCTTCCCGCGTGTGAGTGGGGCCCTGGTTCCCCAAGCAGCCGCTGACTCCCGGACGCCTGCTGGCCAGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | CCGAAGCCTTCCCCGGATGCACTCATGACCGGGGCCTaGCCAGCAGGCGTCCGGGAGTCAGCGGCTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PKPSPDALMTGA*PAGVRESAAAW Trigger: CCAAGCAGCCGCTGACTCCCGGACGCCTGCTGGCCAGGCCCCGGTCATGAGTGCATCCGGGGAAGGCTTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | CGAGGAAGGTGGGCCGGGCACAGGGCGGCCCGTGGTTaGAGGTACCAGAGCTTGCTGGAGCTGGCTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RGRWAGHRAARG*RYQSLLELAGL Trigger: AAGCCCAGCCAGCTCCAGCAAGCTCTGGTACCTGCAACCACGGGCCGCCCTGTGCCCGGCCCACCTTCCTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | GAGCGAAAGGTGTGGCGGGATCCGCCTGGCTGCTGCTaGAGCCCCAGGCTCGTGAATCGCCTCTGCGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: ERKVWRDPPGCC*SPRLVNRLCVP Trigger: CGGGACGCAGAGGCGATTCACGAGCCTGGGGCTCCAGCAGCAGCCAGGCGGATCCCGCCACACCTTTCGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | TGTGGCCCTGGGGACGCCACCACTGGCCTCACACCGTaGAGCGTGGATAGGCCGCTCTGGCCTGTCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CGPGDATTGLTP*SVDRPLWPVCR Trigger: CCTGCAGACAGGCCAGAGCGGCCTATCCACGCTCCACGGTGTGAGGCCAGTGGTGGCGTCCCCAGGGCCACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CAA 72 bp | TCGAGGAAGGTGGGCCGGGCACAGGGCGGCCCGTGGTaGCAGGTACCAGAGCTTGCTGGAGCTGGCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SRKVGRAQGGPW*QVPELAGAGWA Trigger: AGCCCAGCCAGCTCCAGCAAGCTCTGGTACCTGCAACCACGGGCCGCCCTGTGCCCGGCCCACCTTCCTCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | CCCCAGGCTCGTGAATCGCCTCTGCGTCCCGTCCCCTaGGTTGGGCAGCTTCACCTGCTCATCCTGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: PQARESPLRPVP*VGQLHLLILLG Trigger: GCCGAGCAGGATGAGCAGGTGAAGCTGCCCAACGCAGGGGACGGGACGCAGAGGCGATTCACGAGCCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | TCCTTCCGTTCCTGTAGGCCCGAAGCCTTCCCCGGATaGACTCATGACCGGGGCCTGGCCAGCAGGCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SFRSCRPEAFPG*THDRGLASRRP Trigger: CGGACGCCTGCTGGCCAGGCCCCGGTCATGAGTGCATCCGGGGAAGGCTTCGGGCCTACAGGAACGGAAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | CCGTCCCCTGCGTTGGGCAGCTTCACCTGCTCATCCTaGTCGGCCTGGGTGTTTCTGCTCCTAAGCGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: PSPALGSFTCSS*SAWVFLLLSAP Trigger: GGGGGCGCTTAGGAGCAGAAACACCCAGGCCGAGCAGGATGAGCAGGTGAAGCTGCCCAACGCAGGGGACGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | CAGCTGCCTCACCTCCTTTCCATGTGCGGGGATGGGTaGGCAGCGTCCTTGCCAGGGGTGTTCCCGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QLPHLLSMCGDG*AASLPGVFPAE Trigger: CTCTGCCGGGAACACCCCTGGCAAGGACGCTGCCCACCCATCCCCGCACATGGAAAGGAGGTGAGGCAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | GACGTGGGAAGGACGTGCTGGAAGCCCATGGGTGTGTaGGAGGCCCGGGCCTCGAGCCATGTCTTGGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: DVGRTCWKPMGV*EARASSHVLVR Trigger: ACGCACCAAGACATGGCTCGAGGCCCGGGCCTCCCACACACCCATGGGCTTCCAGCACGTCCTTCCCACGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | GGAAGCCGGCATTCGGGGCACACGGAGGTCCTGCCTTaGTGCCCAGCCTTGGGACACCCCACAGTGAATGCC | + |
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Preference number: 6 (lower is better) Translates to: GSRHSGHTEVLP*CPALGHPTVNA Trigger: GGCATTCACTGTGGGGTGTCCCAAGGCTGGGCACCAAGGCAGGACCTCCGTGTGCCCCGAATGCCGGCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CAA 72 bp | GGGAAGCCGGCATTCGGGGCACACGGAGGTCCTGCCTaGGTGCCCAGCCTTGGGACACCCCACAGTGAATGC | + |
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Preference number: 6 (lower is better) Translates to: GKPAFGAHGGPA*VPSLGTPHSEC Trigger: GCATTCACTGTGGGGTGTCCCAAGGCTGGGCACCAAGGCAGGACCTCCGTGTGCCCCGAATGCCGGCTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CAA 90 bp | CAGTCTCCAGGGAAGCCGGCATTCGGGGCACACGGAGGTCCTGCCTaGGTGCCCAGCCTTGGGACACCCCACAGTGAATGCCTCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QSPGKPAFGAHGGPA*VPSLGTPHSECLLS Trigger: GGAGAGGAGGCATTCACTGTGGGGTGTCCCAAGGCTGGGCACCAAGGCAGGACCTCCGTGTGCCCCGAATGCCGGCTTCCCTGGAGACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | CGGTGGTCTTGGGAGGCTGATGTGAGAGATCCCCGCTaGCTGCAGTCTCCAGGGAAGCCGGCATTCGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RWSWEADVRDPR*LQSPGKPAFGA Trigger: TGCCCCGAATGCCGGCTTCCCTGGAGACTGCAGCCAGCGGGGATCTCTCACATCAGCCTCCCAAGACCACCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | AAACCAGAGTCGAGGCAGTCCCCGGCAGCCGGTGTATaGGGAACCCCTCAGCTTCCGTGTGGAGGGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: KPESRQSPAAGV*GTPQLPCGGSG Trigger: CCCTGACCCTCCACACGGAAGCTGAGGGGTTCCCCATACACCGGCTGCCGGGGACTGCCTCGACTCTGGTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | GGGAAGAAGGTGATAGGCACCCAGCCACATGCTCCGTaGCCACAGATCCCTGGGGCCAGCCAAGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GKKVIGTQPHAP*PQIPGASQAAG Trigger: ACCTGCAGCTTGGCTGGCCCCAGGGATCTGTGGGCACGGAGCATGTGGCTGGGTGCCTATCACCTTCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | ACCTTCTTACAGCAGCACAAAGGGGCCACGGCAGCCTaGGACCGCCCAGCCCCACCATGCTTCCTGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: TFLQQHKGATAA*DRPAPPCFLQM Trigger: CATCTGCAGGAAGCATGGTGGGGCTGGGCGGTCCCAGGCTGCCGTGGCCCCTTTGTGCTGCTGTAAGAAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | GAAGCCACCTGCACCGGCTCTGTCTGGTGTCTGACGTaGGAAGGACGTGCTGGAAGCCCATGGGTGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EATCTGSVWCLT*EGRAGSPWVCG Trigger: CCCACACACCCATGGGCTTCCAGCACGTCCTTCCCACGTCAGACACCAGACAGAGCCGGTGCAGGTGGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS TCA 72 bp | ACCTGGAAGCCACCTGCACCGGCTCTGTCTGGTGTCTaGCGTGGGAAGGACGTGCTGGAAGCCCATGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TWKPPAPALSGV*RGKDVLEAHGC Trigger: ACACCCATGGGCTTCCAGCACGTCCTTCCCACGTCAGACACCAGACAGAGCCGGTGCAGGTGGCTTCCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | TCCATCAGAGATGACGGACACAGCAGGGCCTGTCTCTaGCAAAACCAGAGTCGAGGCAGTCCCCGGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SIRDDGHSRACL*QNQSRGSPRQP Trigger: CGGCTGCCGGGGACTGCCTCGACTCTGGTTTTGGCAGAGACAGGCCCTGCTGTGTCCGTCATCTCTGATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | ACATGCCACCTGGAAGCCACCTGCACCGGCTCTGTCTaGTGTCTGACGTGGGAAGGACGTGCTGGAAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: TCHLEATCTGSV*CLTWEGRAGSP Trigger: TGGGCTTCCAGCACGTCCTTCCCACGTCAGACACCAGACAGAGCCGGTGCAGGTGGCTTCCAGGTGGCATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CCA 72 bp | ACTGGCCTCACACCGTGGAGCGTGGATAGGCCGCTCTaGCCTGTCTGCAGGGGAAATGGCTGTCACTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: TGLTPWSVDRPL*PVCRGNGCHFH Trigger: ATGGAAGTGACAGCCATTTCCCCTGCAGACAGGCCAGAGCGGCCTATCCACGCTCCACGGTGTGAGGCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | TGGAAGCAGAGAGCAGTCCTCGCCAAACACCAAACCTaGCGGGGCCCTGGTTTCAGACTTCCCAGACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: WKQRAVLAKHQT*RGPGFRLPRLQ Trigger: CTGGAGTCTGGGAAGTCTGAAACCAGGGCCCCGGCAGGTTTGGTGTTTGGCGAGGACTGCTCTCTGCTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | TGGGTGAATTTCATCATGCTGACACTCCTCCACACCTaGTCCGTGCCTGGCAGTCATGGTCCAGGGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: WVNFIMLTLLHT*SVPGSHGPGAG Trigger: TCCAGCCCCTGGACCATGACTGCCAGGCACGGAGCAGGTGTGGAGGAGTGTCAGCATGATGAAATTCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS TCA 72 bp | GCCACATACTTTCCGGATAGGAGAAGGTCCAGAAGGTaGAGTCTGCGCCCAGGACCTGCAGAGGTGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: ATYFPDRRRSRR*SLRPGPAEVRG Trigger: ACCTCTCACCTCTGCAGGTCCTGGGCGCAGACTTCACCTTCTGGACCTTCTCCTATCCGGAAAGTATGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CAA 72 bp | TCTGCTATGAGAGGACACAGTAACAAGGGGACCACCTaGGAAGCAGAGAGCAGTCCTCGCCAAACACCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SAMRGHSNKGTT*EAESSPRQTPN Trigger: GTTTGGTGTTTGGCGAGGACTGCTCTCTGCTTCCAAGGTGGTCCCCTTGTTACTGTGTCCTCTCATAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | CCACGTCTTCGTCACGAAGCCTCGAAGTGCTGCCTGTaGTTAGCAGTGAAAATATTTACTTGGAGATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PRLRHEASKCCL*LAVKIFTWRCS Trigger: TGAACATCTCCAAGTAAATATTTTCACTGCTAAGCACAGGCAGCACTTCGAGGCTTCGTGACGAAGACGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS GCA 72 bp | AGCATTCCACGTCTTCGTCACGAAGCCTCGAAGTGCTaGCTGTGCTTAGCAGTGAAAATATTTACTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SIPRLRHEASKC*LCLAVKIFTWR Trigger: TCTCCAAGTAAATATTTTCACTGCTAAGCACAGGCAGCACTTCGAGGCTTCGTGACGAAGACGTGGAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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| CDS CAA 72 bp | TGTGGTTTCAATGTCTGTGTTCCTCCGAAATCCATGTaGAAACTTAATCCCCAGCGCAACAGTGTTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CGFNVCVPPKSM*KLNPQRNSVQR Trigger: CCTCTGAACACTGTTGCGCTGGGGATTAAGTTTCAACATGGATTTCGGAGGAACACAGACATTGAAACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441947.1 |
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