Pregenerated sensors for LINC00310 (Homo sapiens)
Ensembl gene IDs: ENSG00000227456Ensembl transcript IDs: ENST00000416145.1, ENST00000419881.6, ENST00000428914.2, ENST00000430922.3, ENST00000609062.1, ENST00000609947.1, ENST00000619549.1, ENST00000630751.2, ENST00000652428.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCAACCCAACACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTaGTGCAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAGCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: PTQHFITVLVPLPKS*CSTWAVLASLWQQG Trigger: CCCTTGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630751.2 |
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| CDS CCA 90 bp | GAAACTCCTTTACTTTCCCGGGGACCCGCGGACGCATATTTGCCTTaGAACATAATGGTGGGGTGGCTGTGGCCCTTGCAGAGTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: ETPLLSRGPADAYLP*NIMVGWLWPLQSVG Trigger: GCCCACACTCTGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTCCGCGGGTCCCCGGGAAAGTAAAGGAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS GCA 90 bp | CCAACCCAACACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTaGTGCAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAGCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: PTQHFITVLVPLPKS*CSTWAVLASLWQLV Trigger: GACAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416145.1 ENST00000419881.6 |
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| CDS GCA 90 bp | CCAACCCAACACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTaGTGCAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PTQHFITVLVPLPKS*CSTWAVLASLWQPK Trigger: CTTTGGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652428.2 |
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| CDS CCA 90 bp | CGGGGACCCGCGGACGCATATTTGCCTTGGAACATAATGGTGGGGTaGCTGTGGCCCTTGCAGAGTGTGGGCATGTTTCACGTTATATGC | + |
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Preference number: 5 (lower is better) Translates to: RGPADAYLPWNIMVG*LWPLQSVGMFHVIC Trigger: GCATATAACGTGAAACATGCCCACACTCTGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTCCGCGGGTCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 90 bp | TTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTaGGCGGTGTTAGCATCCCTCTGGCAGCCAAAGACATTCCACGGG | + |
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Preference number: 5 (lower is better) Translates to: FITVLVPLPKSCCST*AVLASLWQPKTFHG Trigger: CCCGTGGAATGTCTTTGGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652428.2 |
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| CDS GCA 90 bp | ACCCAACACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTaGAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAGCTTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: TQHFITVLVPLPKSC*STWAVLASLWQLVS Trigger: TGAGACAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416145.1 ENST00000419881.6 |
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| CDS GCA 90 bp | ACCCAACACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTaGAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAGCTTAACTGG | + |
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Preference number: 5 (lower is better) Translates to: TQHFITVLVPLPKSC*STWAVLASLWQLNW Trigger: CCAGTTAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619549.1 |
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| CDS GCA 90 bp | CCAACCCAACACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTaGTGCAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAGCTTAAC | + |
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Preference number: 5 (lower is better) Translates to: PTQHFITVLVPLPKS*CSTWAVLASLWQLN Trigger: GTTAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619549.1 |
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| CDS GCA 90 bp | ACCCAACACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTaGAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAGCAAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: TQHFITVLVPLPKSC*STWAVLASLWQQGI Trigger: AATCCCTTGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630751.2 |
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| CDS GCA 90 bp | ACCCAACACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTaGAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAGCCAAAGACA | + |
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Preference number: 5 (lower is better) Translates to: TQHFITVLVPLPKSC*STWAVLASLWQPKT Trigger: TGTCTTTGGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652428.2 |
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| CDS GCA 90 bp | TTGTGGTCCAGACAAGACTTGAGCCAACCCAACACTTCATTACAGTaGTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTGGGCGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LWSRQDLSQPNTSLQ*WFPFQSPAAARGRC Trigger: ACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGTTGGCTCAAGTCTTGTCTGGACCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 90 bp | CCCGCGGACGCATATTTGCCTTGGAACATAATGGTGGGGTGGCTGTaGCCCTTGCAGAGTGTGGGCATGTTTCACGTTATATGCATGCGT | + |
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Preference number: 5 (lower is better) Translates to: PADAYLPWNIMVGWL*PLQSVGMFHVICMR Trigger: ACGCATGCATATAACGTGAAACATGCCCACACTCTGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTCCGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 90 bp | TTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTaGGCGGTGTTAGCATCCCTCTGGCAGCTTAACTGGATCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: FITVLVPLPKSCCST*AVLASLWQLNWIIC Trigger: GCAGATGATCCAGTTAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619549.1 |
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| CDS TCA 90 bp | AGACAAGAGTCGGGGCCTGAGGGTGTGAAGCAGGGAAGAAGGTGGTaGCCTGCTCCATCTTATCTTCTGGGAGGATCCTCTGAATTTGCA | + |
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Preference number: 5 (lower is better) Translates to: RQESGPEGVKQGRRW*PAPSYLLGGSSEFA Trigger: TGCAAATTCAGAGGATCCTCCCAGAAGATAAGATGGAGCAGGTCACCACCTTCTTCCCTGCTTCACACCCTCAGGCCCCGACTCTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS GCA 90 bp | AATCTGCAGGGTGAGTCAGCAAGCAAGACCCAAGAGAACGGATGGTaGACTTACAGTCTGGGTCCAAAGGCCCAAGAACCAAGAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: NLQGESASKTQENGW*TYSLGPKAQEPREL Trigger: CAGCTCTCTTGGTTCTTGGGCCTTTGGACCCAGACTGTAAGTGCACCATCCGTTCTCTTGGGTCTTGCTTGCTGACTCACCCTGCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CCA 90 bp | TTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTaGGCGGTGTTAGCATCCCTCTGGCAGCTTGTCTCATTTGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: FITVLVPLPKSCCST*AVLASLWQLVSFVH Trigger: GTGAACAAATGAGACAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416145.1 ENST00000419881.6 |
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| CDS CCA 90 bp | CCAAATCTGCAGGGTGAGTCAGCAAGCAAGACCCAAGAGAACGGATaGTGCACTTACAGTCTGGGTCCAAAGGCCCAAGAACCAAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: PNLQGESASKTQENG*CTYSLGPKAQEPRE Trigger: CTCTCTTGGTTCTTGGGCCTTTGGACCCAGACTGTAAGTGCACCATCCGTTCTCTTGGGTCTTGCTTGCTGACTCACCCTGCAGATTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS GCA 90 bp | GGCTGTGGCCCTTGCAGAGTGTGGGCATGTTTCACGTTATATGCATaGGTGCTGGAGGATGAAACCAAATCCATTTGGGACCTGACACTG | + |
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Preference number: 5 (lower is better) Translates to: GCGPCRVWACFTLYA*VLEDETKSIWDLTL Trigger: CAGTGTCAGGTCCCAAATGGATTTGGTTTCATCCTCCAGCACGCATGCATATAACGTGAAACATGCCCACACTCTGCAAGGGCCACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 90 bp | TCACAGTTCTGCATGACTGGGGAGGCCTCAGGAAACTTACAATCATaGAGGAGGGCAAAGGGGAAGCAAGACACCTTCTTCACAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SQFCMTGEASGNLQS*RRAKGKQDTFFTRP Trigger: TGGCCTTGTGAAGAAGGTGTCTTGCTTCCCCTTTGCCCTCCTCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGTCATGCAGAACTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CCA 90 bp | TTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTaGGCGGTGTTAGCATCCCTCTGGCAGCAAGGGATTAACTATTCA | + |
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Preference number: 5 (lower is better) Translates to: FITVLVPLPKSCCST*AVLASLWQQGINYS Trigger: TGAATAGTTAATCCCTTGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630751.2 |
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| CDS CCA 90 bp | GCATCCCTCTGGCAGCCAAAGACATTCCACGGGTTTAACAAGTCTTaGGCATCTTGTGGAAGACTCAGATTCTCATCCATCTCAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: ASLWQPKTFHGFNKS*ASCGRLRFSSISEM Trigger: CATCTCTGAGATGGATGAGAATCTGAGTCTTCCACAAGATGCCCAAGACTTGTTAAACCCGTGGAATGTCTTTGGCTGCCAGAGGGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652428.2 |
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| CDS TCA 90 bp | GGTGCACTTACAGTCTGGGTCCAAAGGCCCAAGAACCAAGAGAGCTaGTGGTATAAACTTCAATCTGAAGCCTGGCAGGTTGAAGATCTA | + |
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Preference number: 5 (lower is better) Translates to: GALTVWVQRPKNQES*WYKLQSEAWQVEDL Trigger: TAGATCTTCAACCTGCCAGGCTTCAGATTGAAGTTTATACCATCAGCTCTCTTGGTTCTTGGGCCTTTGGACCCAGACTGTAAGTGCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS GCA 90 bp | TGGGTGGTAAGAGTCAGGAGTCCAAGAAAGGCATGTGGTTATTTTTaGCCCTTTCTGGACCCCGTCTGCACTTTGGAAAGAAAGGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: WVVRVRSPRKACGYF*PFLDPVCTLERKGN Trigger: ATTTCCCTTTCTTTCCAAAGTGCAGACGGGGTCCAGAAAGGGGCAAAAATAACCACATGCCTTTCTTGGACTCCTGACTCTTACCACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430922.3 |
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| CDS TCA 90 bp | CAGAGTGTGGGCATGTTTCACGTTATATGCATGCGTGCTGGAGGATaGAACCAAATCCATTTGGGACCTGACACTGTCATCCACCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: QSVGMFHVICMRAGG*NQIHLGPDTVIHQK Trigger: TTTTTGGTGGATGACAGTGTCAGGTCCCAAATGGATTTGGTTTCATCCTCCAGCACGCATGCATATAACGTGAAACATGCCCACACTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 90 bp | TGTGTTCATGTCTTCATGTTGGTGTGTCATTTTAGTGTCTTGGCCTaGGTTCCCCTCAGAAAGCATAGCCTGCAACAAGGGCTTTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: CVHVFMLVCHFSVLA*VPLRKHSLQQGLCK Trigger: CTTACAAAGCCCTTGTTGCAGGCTATGCTTTCTGAGGGGAACCCAGGCCAAGACACTAAAATGACACACCAACATGAAGACATGAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS CCA 90 bp | GCAATTGTGTTCATGTCTTCATGTTGGTGTGTCATTTTAGTGTCTTaGCCTGGGTTCCCCTCAGAAAGCATAGCCTGCAACAAGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: AIVFMSSCWCVILVS*PGFPSESIACNKGF Trigger: AAAGCCCTTGTTGCAGGCTATGCTTTCTGAGGGGAACCCAGGCCAAGACACTAAAATGACACACCAACATGAAGACATGAACACAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS CCA 90 bp | TGCAATCCAACCAATCCCTTTGCAATTGTGTTCATGTCTTCATGTTaGTGTGTCATTTTAGTGTCTTGGCCTGGGTTCCCCTCAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: CNPTNPFAIVFMSSC*CVILVSWPGFPSES Trigger: GCTTTCTGAGGGGAACCCAGGCCAAGACACTAAAATGACACACCAACATGAAGACATGAACACAATTGCAAAGGGATTGGTTGGATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS CCA 90 bp | CTTGGGCATCTTGTGGAAGACTCAGATTCTCATCCATCTCAGAGATaGATGGGGAACTTGACGGTTTTAATTCTGTGCACCATGATTGCA | + |
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Preference number: 5 (lower is better) Translates to: LGHLVEDSDSHPSQR*MGNLTVLILCTMIA Trigger: TGCAATCATGGTGCACAGAATTAAAACCGTCAAGTTCCCCATCCATCTCTGAGATGGATGAGAATCTGAGTCTTCCACAAGATGCCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS CCA 90 bp | GCTCCCATGATGCAATTACCTCCACCTGATCCCTCCCCTGACACATaGGGATTATGGGGATTATGGGATTTACAATTCAAGATGAGATTT | + |
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Preference number: 5 (lower is better) Translates to: APMMQLPPPDPSPDT*GLWGLWDLQFKMRF Trigger: AAATCTCATCTTGAATTGTAAATCCCATAATCCCCATAATCCCCATGTGTCAGGGGAGGGATCAGGTGGAGGTAATTGCATCATGGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CCA 90 bp | TTTAGACAAAAGGGGCCAAAGACATTCCACGGGTTTAACAAGTCTTaGGCATCTTGTGGAAGACTCAGATTCTCATCCATCTCAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: FRQKGPKTFHGFNKS*ASCGRLRFSSISEM Trigger: CATCTCTGAGATGGATGAGAATCTGAGTCTTCCACAAGATGCCCAAGACTTGTTAAACCCGTGGAATGTCTTTGGCCCCTTTTGTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609947.1 |
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| CDS CCA 90 bp | CTCACAGTTGGTTTGGGTTTTAAAGGCACACTAGTGGTTGAAAAATaGTTTGTGGTCCAGACAAGACTTGAGCCAACCCAACACTTCATT | + |
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Preference number: 5 (lower is better) Translates to: LTVGLGFKGTLVVEK*FVVQTRLEPTQHFI Trigger: AATGAAGTGTTGGGTTGGCTCAAGTCTTGTCTGGACCACAAACCATTTTTCAACCACTAGTGTGCCTTTAAAACCCAAACCAACTGTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 90 bp | TGTTTCCATCCAAGGAATTGTTGGTTGCTACACAAGAAAACCCTTTaGGTGGTAAGAGTCAGGAGTCCAAGAAAGGCATGTGGTTATTTT | + |
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Preference number: 5 (lower is better) Translates to: CFHPRNCWLLHKKTL*VVRVRSPRKACGYF Trigger: AAAATAACCACATGCCTTTCTTGGACTCCTGACTCTTACCACCCAAAGGGTTTTCTTGTGTAGCAACCAACAATTCCTTGGATGGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430922.3 |
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| CDS TCA 90 bp | CTGACACATGGGGATTATGGGGATTATGGGATTTACAATTCAAGATaGGATTTGAATGAGGACACAAAGCCTAACCGTATCAGGGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LTHGDYGDYGIYNSR*DLNEDTKPNRIRVL Trigger: AAGAACCCTGATACGGTTAGGCTTTGTGTCCTCATTCAAATCTCATCTTGAATTGTAAATCCCATAATCCCCATAATCCCCATGTGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CCA 72 bp | GTGCTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTaGGCGGTGTTAGCATCCCTCTGGCAGCTTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VLVPLPKSCCST*AVLASLWQLVS Trigger: TGAGACAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416145.1 ENST00000419881.6 |
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| CDS CCA 72 bp | GTGCTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTaGGCGGTGTTAGCATCCCTCTGGCAGCTTAACTGG | + |
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Preference number: 6 (lower is better) Translates to: VLVPLPKSCCST*AVLASLWQLNW Trigger: CCAGTTAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619549.1 |
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| CDS CCA 72 bp | GTGCTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTaGGCGGTGTTAGCATCCCTCTGGCAGCAAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: VLVPLPKSCCST*AVLASLWQQGI Trigger: AATCCCTTGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630751.2 |
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| CDS CCA 72 bp | GTGCTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTaGGCGGTGTTAGCATCCCTCTGGCAGCCAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: VLVPLPKSCCST*AVLASLWQPKT Trigger: TGTCTTTGGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652428.2 |
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| CDS CCA 72 bp | TTACTTTCCCGGGGACCCGCGGACGCATATTTGCCTTaGAACATAATGGTGGGGTGGCTGTGGCCCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSRGPADAYLP*NIMVGWLWPLQ Trigger: CTGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTCCGCGGGTCCCCGGGAAAGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CAA 72 bp | ACTCCTTTACTTTCCCGGGGACCCGCGGACGCATATTaGCCTTGGAACATAATGGTGGGGTGGCTGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TPLLSRGPADAY*PWNIMVGWLWP Trigger: GGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTCCGCGGGTCCCCGGGAAAGTAAAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS TCA 72 bp | TCGGGGCCTGAGGGTGTGAAGCAGGGAAGAAGGTGGTaGCCTGCTCCATCTTATCTTCTGGGAGGATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SGPEGVKQGRRW*PAPSYLLGGSS Trigger: AGAGGATCCTCCCAGAAGATAAGATGGAGCAGGTCACCACCTTCTTCCCTGCTTCACACCCTCAGGCCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS GCA 72 bp | TTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTGCTaGAGCACGTGGGCGGTGTTAGCATCCCTCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FITVLVPLPKSC*STWAVLASLWQ Trigger: CTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS GCA 72 bp | CACTTCATTACAGTGCTGGTTCCCCTTCCAAAGTCCTaGTGCAGCACGTGGGCGGTGTTAGCATCCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: HFITVLVPLPKS*CSTWAVLASLW Trigger: CCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CAA 72 bp | TTTACTTTCCCGGGGACCCGCGGACGCATATTTGCCTaGGAACATAATGGTGGGGTGGCTGTGGCCCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: FTFPGTRGRIFA*EHNGGVAVALA Trigger: TGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTCCGCGGGTCCCCGGGAAAGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 72 bp | GCGGACGCATATTTGCCTTGGAACATAATGGTGGGGTaGCTGTGGCCCTTGCAGAGTGTGGGCATGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: ADAYLPWNIMVG*LWPLQSVGMFH Trigger: GTGAAACATGCCCACACTCTGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 72 bp | TCCTGCTGCAGCACGTGGGCGGTGTTAGCATCCCTCTaGCAGCTTAACTGGATCATCTGCAAAGACCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SCCSTWAVLASL*QLNWIICKDPN Trigger: ATTGGGGTCTTTGCAGATGATCCAGTTAAGCTGCCAGAGGGATGCTAACACCGCCCACGTGCTGCAGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619549.1 |
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| CDS CAA 90 bp | CAATGTGAAACTCCTTTACTTTCCCGGGGACCCGCGGACGCATATTaGCCTTGGAACATAATGGTGGGGTGGCTGTGGCCCTTGCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: QCETPLLSRGPADAY*PWNIMVGWLWPLQS Trigger: ACTCTGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTCCGCGGGTCCCCGGGAAAGTAAAGGAGTTTCACATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS GCA 72 bp | GGTGAGTCAGCAAGCAAGACCCAAGAGAACGGATGGTaGACTTACAGTCTGGGTCCAAAGGCCCAAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: GESASKTQENGW*TYSLGPKAQEP Trigger: TGGTTCTTGGGCCTTTGGACCCAGACTGTAAGTGCACCATCCGTTCTCTTGGGTCTTGCTTGCTGACTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CCA 72 bp | CAAGACTTGAGCCAACCCAACACTTCATTACAGTGCTaGTTCCCCTTCCAAAGTCCTGCTGCAGCACGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QDLSQPNTSLQC*FPFQSPAAARG Trigger: CCCACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGTTGGCTCAAGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CAA 90 bp | CCCCTCAGAAAGCATAGCCTGCAACAAGGGCTTTGTAAGGGAAGATaGGTTTGGAGAGTGATCTCAGCAGACAAGAGTCGGGGCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PLRKHSLQQGLCKGR*VWRVISADKSRGLR Trigger: CCTCAGGCCCCGACTCTTGTCTGCTGAGATCACTCTCCAAACCAATCTTCCCTTACAAAGCCCTTGTTGCAGGCTATGCTTTCTGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS TCA 72 bp | ACTATCGTGAGAAGAGCACAGGGGAAACTGCTCCCATaGTGCAATTACCTCCACCTGATCCCTCCCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: TIVRRAQGKLLP*CNYLHLIPPLT Trigger: TGTCAGGGGAGGGATCAGGTGGAGGTAATTGCATCATGGGAGCAGTTTCCCCTGTGCTCTTCTCACGATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CCA 72 bp | TGCATGACTGGGGAGGCCTCAGGAAACTTACAATCATaGAGGAGGGCAAAGGGGAAGCAAGACACCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CMTGEASGNLQS*RRAKGKQDTFF Trigger: GAAGAAGGTGTCTTGCTTCCCCTTTGCCCTCCTCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGTCATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CAA 90 bp | GACGCATATTTGCCTTGGAACATAATGGTGGGGTGGCTGTGGCCCTaGCAGAGTGTGGGCATGTTTCACGTTATATGCATGCGTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: DAYLPWNIMVGWLWP*QSVGMFHVICMRAG Trigger: TCCAGCACGCATGCATATAACGTGAAACATGCCCACACTCTGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAAATATGCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS GCA 72 bp | AGACAAGACTTGAGCCAACCCAACACTTCATTACAGTaGTGGTTCCCCTTCCAAAGTCCTGCTGCAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: RQDLSQPNTSLQ*WFPFQSPAAAR Trigger: ACGTGCTGCAGCAGGACTTTGGAAGGGGAACCAGCACTGTAATGAAGTGTTGGGTTGGCTCAAGTCTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS GCA 72 bp | GTGTCTTGGCCTGGGTTCCCCTCAGAAAGCATAGCCTaGAACAAGGGCTTTGTAAGGGAAGATTGGTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VSWPGFPSESIA*NKGFVREDWFG Trigger: TCCAAACCAATCTTCCCTTACAAAGCCCTTGTTGCAGGCTATGCTTTCTGAGGGGAACCCAGGCCAAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS CAA 72 bp | TTGCCTTGGAACATAATGGTGGGGTGGCTGTGGCCCTaGCAGAGTGTGGGCATGTTTCACGTTATATGCATG | + |
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Preference number: 6 (lower is better) Translates to: LPWNIMVGWLWP*QSVGMFHVICM Trigger: CATGCATATAACGTGAAACATGCCCACACTCTGCAAGGGCCACAGCCACCCCACCATTATGTTCCAAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS CCA 72 bp | GTCTTCATGTTGGTGTGTCATTTTAGTGTCTTGGCCTaGGTTCCCCTCAGAAAGCATAGCCTGCAACAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VFMLVCHFSVLA*VPLRKHSLQQG Trigger: CCCTTGTTGCAGGCTATGCTTTCTGAGGGGAACCCAGGCCAAGACACTAAAATGACACACCAACATGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS GCA 72 bp | CCTTGCAGAGTGTGGGCATGTTTCACGTTATATGCATaGGTGCTGGAGGATGAAACCAAATCCATTTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PCRVWACFTLYA*VLEDETKSIWD Trigger: GTCCCAAATGGATTTGGTTTCATCCTCCAGCACGCATGCATATAACGTGAAACATGCCCACACTCTGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS GCA 72 bp | AGAGTCAGGAGTCCAAGAAAGGCATGTGGTTATTTTTaGCCCTTTCTGGACCCCGTCTGCACTTTGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: RVRSPRKACGYF*PFLDPVCTLER Trigger: TCTTTCCAAAGTGCAGACGGGGTCCAGAAAGGGGCAAAAATAACCACATGCCTTTCTTGGACTCCTGACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430922.3 |
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| CDS CAA 72 bp | AAGCATAGCCTGCAACAAGGGCTTTGTAAGGGAAGATaGGTTTGGAGAGTGATCTCAGCAGACAAGAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: KHSLQQGLCKGR*VWRVISADKSR Trigger: CCGACTCTTGTCTGCTGAGATCACTCTCCAAACCAATCTTCCCTTACAAAGCCCTTGTTGCAGGCTATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS CAA 90 bp | TGCAATTGTGTTCATGTCTTCATGTTGGTGTGTCATTTTAGTGTCTaGGCCTGGGTTCCCCTCAGAAAGCATAGCCTGCAACAAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CNCVHVFMLVCHFSV*AWVPLRKHSLQQGL Trigger: AAGCCCTTGTTGCAGGCTATGCTTTCTGAGGGGAACCCAGGCCAAGACACTAAAATGACACACCAACATGAAGACATGAACACAATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS CAA 90 bp | GTGGAAGACTCAGATTCTCATCCATCTCAGAGATGGATGGGGAACTaGACGGTTTTAATTCTGTGCACCATGATTGCAAGGGTCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: VEDSDSHPSQRWMGN*TVLILCTMIARVIW Trigger: CCAGATGACCCTTGCAATCATGGTGCACAGAATTAAAACCGTCAAGTTCCCCATCCATCTCTGAGATGGATGAGAATCTGAGTCTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS TCA 72 bp | GGCATGTTTCACGTTATATGCATGCGTGCTGGAGGATaGAACCAAATCCATTTGGGACCTGACACTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: GMFHVICMRAGG*NQIHLGPDTVI Trigger: GATGACAGTGTCAGGTCCCAAATGGATTTGGTTTCATCCTCCAGCACGCATGCATATAACGTGAAACATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000416145.1 ENST00000419881.6 ENST00000619549.1 ENST00000630751.2 ENST00000652428.2 |
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| CDS GCA 72 bp | AACATTAAGACGACTTTTTGGTCTCCTGCTTCCTACTaGCTCAAGCAGAAACACGGCTTCCCATTCGCATTC | + |
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Preference number: 6 (lower is better) Translates to: NIKTTFWSPASY*LKQKHGFPFAF Trigger: GAATGCGAATGGGAAGCCGTGTTTCTGCTTGAGGCAGTAGGAAGCAGGAGACCAAAAAGTCGTCTTAATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430922.3 |
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| CDS CAA 72 bp | GTTCATGTCTTCATGTTGGTGTGTCATTTTAGTGTCTaGGCCTGGGTTCCCCTCAGAAAGCATAGCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VHVFMLVCHFSV*AWVPLRKHSLQ Trigger: TTGCAGGCTATGCTTTCTGAGGGGAACCCAGGCCAAGACACTAAAATGACACACCAACATGAAGACATGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS TCA 72 bp | AAACCATCAGATCTTGTGAGAACTCTTTCACTATCGTaGGAAGAGCACAGGGGAAACTGCTCCCATGATGCA | + |
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Preference number: 6 (lower is better) Translates to: KPSDLVRTLSLS*EEHRGNCSHDA Trigger: TGCATCATGGGAGCAGTTTCCCCTGTGCTCTTCTCACGATAGTGAAAGAGTTCTCACAAGATCTGATGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CCA 72 bp | TCAAGCAGACGAAATTTCCTCCTACTGAGGGAGGGTTaGCCTTTTTGTTCCATTCAGGCTTTCAATGGATTG | + |
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Preference number: 6 (lower is better) Translates to: SSRRNFLLLREG*PFCSIQAFNGL Trigger: CAATCCATTGAAAGCCTGAATGGAACAAAAAGGCCAACCCTCCCTCAGTAGGAGGAAATTTCGTCTGCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CCA 72 bp | ATGCAATTACCTCCACCTGATCCCTCCCCTGACACATaGGGATTATGGGGATTATGGGATTTACAATTCAAG | + |
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Preference number: 6 (lower is better) Translates to: MQLPPPDPSPDT*GLWGLWDLQFK Trigger: CTTGAATTGTAAATCCCATAATCCCCATAATCCCCATGTGTCAGGGGAGGGATCAGGTGGAGGTAATTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CAA 72 bp | TCCAAGGAATTGTTGGTTGCTACACAAGAAAACCCTTaGGGTGGTAAGAGTCAGGAGTCCAAGAAAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: SKELLVATQENP*GGKSQESKKGM Trigger: CATGCCTTTCTTGGACTCCTGACTCTTACCACCCAAAGGGTTTTCTTGTGTAGCAACCAACAATTCCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430922.3 |
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| CDS CAA 90 bp | ATGCAATCCAACCAATCCCTTTGCAATTGTGTTCATGTCTTCATGTaGGTGTGTCATTTTAGTGTCTTGGCCTGGGTTCCCCTCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: MQSNQSLCNCVHVFM*VCHFSVLAWVPLRK Trigger: CTTTCTGAGGGGAACCCAGGCCAAGACACTAAAATGACACACCAACATGAAGACATGAACACAATTGCAAAGGGATTGGTTGGATTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS TCA 72 bp | CAAGTCCAAAGGCAGGAAAAAGTTGACGTCCTAGTTTaGATGCAGTCAAGCAGACGAAATTTCCTCCTACTG | + |
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Preference number: 6 (lower is better) Translates to: QVQRQEKVDVLV*MQSSRRNFLLL Trigger: CAGTAGGAGGAAATTTCGTCTGCTTGACTGCATTCAAACTAGGACGTCAACTTTTTCCTGCCTTTGGACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS TCA 72 bp | AGGACACAAAGCCTAACCGTATCAGGGTTCTTCCAGTaGGACAGGATGCGTATAGAGAGATATATTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RTQSLTVSGFFQ*DRMRIERYIRR Trigger: CCTTCTAATATATCTCTCTATACGCATCCTGTCTCACTGGAAGAACCCTGATACGGTTAGGCTTTGTGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS CAA 72 bp | TCAGATTCTCATCCATCTCAGAGATGGATGGGGAACTaGACGGTTTTAATTCTGTGCACCATGATTGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SDSHPSQRWMGN*TVLILCTMIAR Trigger: CCTTGCAATCATGGTGCACAGAATTAAAACCGTCAAGTTCCCCATCCATCTCTGAGATGGATGAGAATCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000428914.2 ENST00000609062.1 ENST00000609947.1 ENST00000652428.2 |
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| CDS CAA 90 bp | GTGTTTCCATCCAAGGAATTGTTGGTTGCTACACAAGAAAACCCTTaGGGTGGTAAGAGTCAGGAGTCCAAGAAAGGCATGTGGTTATTT | + |
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Preference number: 6 (lower is better) Translates to: VFPSKELLVATQENP*GGKSQESKKGMWLF Trigger: AAATAACCACATGCCTTTCTTGGACTCCTGACTCTTACCACCCAAAGGGTTTTCTTGTGTAGCAACCAACAATTCCTTGGATGGAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430922.3 |
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| CDS CAA 72 bp | ACAAAGAATCCAAAGCCAGCAACATCGATCAGCTTCTaGCTTTTTGTCCAACTACTTGCCTACAACTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: TKNPKPATSISF*LFVQLLAYNSR Trigger: TCTAGAGTTGTAGGCAAGTAGTTGGACAAAAAGCAAGAAGCTGATCGATGTTGCTGGCTTTGGATTCTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000428914.2 ENST00000430922.3 |
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| CDS CAA 90 bp | TCACAAAGAATCCAAAGCCAGCAACATCGATCAGCTTCTTGCTTTTaGTCCAACTACTTGCCTACAACTCTAGAAAAACAACAGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SQRIQSQQHRSASCF*SNYLPTTLEKQQRS Trigger: AGACCTCTGTTGTTTTTCTAGAGTTGTAGGCAAGTAGTTGGACAAAAAGCAAGAAGCTGATCGATGTTGCTGGCTTTGGATTCTTTGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000428914.2 ENST00000430922.3 |
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| CDS TCA 72 bp | GGGGATTATGGGGATTATGGGATTTACAATTCAAGATaGGATTTGAATGAGGACACAAAGCCTAACCGTATC | + |
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Preference number: 6 (lower is better) Translates to: GDYGDYGIYNSR*DLNEDTKPNRI Trigger: GATACGGTTAGGCTTTGTGTCCTCATTCAAATCTCATCTTGAATTGTAAATCCCATAATCCCCATAATCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000430922.3 ENST00000652428.2 |
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| CDS TCA 72 bp | AGCAAGGGATTAACTATTCATGGGTCACCTGAGAACTaGTTCATCTTCCTGCTTCAAGGAATGACCATATAT | + |
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Preference number: 6 (lower is better) Translates to: SKGLTIHGSPEN*FIFLLQGMTIY Trigger: ATATATGGTCATTCCTTGAAGCAGGAAGATGAATCAGTTCTCAGGTGACCCATGAATAGTTAATCCCTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630751.2 |
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| CDS CAA 72 bp | ATCCAAAGCCAGCAACATCGATCAGCTTCTTGCTTTTaGTCCAACTACTTGCCTACAACTCTAGAAAAACAA | + |
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Preference number: 6 (lower is better) Translates to: IQSQQHRSASCF*SNYLPTTLEKQ Trigger: TTGTTTTTCTAGAGTTGTAGGCAAGTAGTTGGACAAAAAGCAAGAAGCTGATCGATGTTGCTGGCTTTGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000428914.2 ENST00000430922.3 |
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| CDS CAA 90 bp | CATTTGTTCACAAAGAATCCAAAGCCAGCAACATCGATCAGCTTCTaGCTTTTTGTCCAACTACTTGCCTACAACTCTAGAAAAACAACA | + |
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Preference number: 6 (lower is better) Translates to: HLFTKNPKPATSISF*LFVQLLAYNSRKTT Trigger: TGTTGTTTTTCTAGAGTTGTAGGCAAGTAGTTGGACAAAAAGCAAGAAGCTGATCGATGTTGCTGGCTTTGGATTCTTTGTGAACAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000428914.2 ENST00000430922.3 |
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