Pregenerated sensors for LINC00309 (Homo sapiens)
Ensembl gene IDs: ENSG00000230923Ensembl transcript IDs: ENST00000431020.1, ENST00000648144.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAAGAGGCTGGGTGTTGCGGCATTAATTCTCCTGGGTTGGGAGCCTaGGCAGGGTGGGTGTCAAGTGGCTCTGGCAACTGGACCCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: QEAGCCGINSPGLGA*AGWVSSGSGNWTPS Trigger: CGAAGGGGTCCAGTTGCCAGAGCCACTTGACACCCACCCTGCCCAGGCTCCCAACCCAGGAGAATTAATGCCGCAACACCCAGCCTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS GCA 90 bp | AGGAATGAGGGTGGGTCACAGGAGGTCCTAACGGGGAGGCAAATCTaGTTTAGCAGCAGCTCGTTTCAAGAGGCTGGGTGTTGCGGCATT | + |
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Preference number: 5 (lower is better) Translates to: RNEGGSQEVLTGRQI*FSSSSFQEAGCCGI Trigger: AATGCCGCAACACCCAGCCTCTTGAAACGAGCTGCTGCTAAAGCAGATTTGCCTCCCCGTTAGGACCTCCTGTGACCCACCCTCATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 90 bp | GCAGCAGCGCGGTTCACGCAGAGAGCACCCCAGGCAGCCACGAACTaGCTTGCTCCGTTCAGATTTCTCTTAAACAGCAGTTTTCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: AAARFTQRAPQAATN*LAPFRFLLNSSFPF Trigger: AAACGGAAAACTGCTGTTTAAGAGAAATCTGAACGGAGCAAGCCAGTTCGTGGCTGCCTGGGGTGCTCTCTGCGTGAACCGCGCTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 90 bp | ATGGGAATGGAAATGATTCACGGAGAGCTGGTTGCAGCAGGGAACTaGGCCTCGCTTGCATCTGGAGATCAGGGCTCTGTAGAGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: MGMEMIHGELVAAGN*ASLASGDQGSVEPV Trigger: TACTGGCTCTACAGAGCCCTGATCTCCAGATGCAAGCGAGGCCCAGTTCCCTGCTGCAACCAGCTCTCCGTGAATCATTTCCATTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS TCA 90 bp | GCTTGCATCTGGAGATCAGGGCTCTGTAGAGCCAGTACTTGCCCCTaGCCCAGCCCCCTTTCCAGCAGTGTTTATATGCTTTCTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: ACIWRSGLCRASTCP*PSPLSSSVYMLSLL Trigger: AAGCAGAGAAAGCATATAAACACTGCTGGAAAGGGGGCTGGGTCAGGGGCAAGTACTGGCTCTACAGAGCCCTGATCTCCAGATGCAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 90 bp | TTTTCTGGCAGGGCTCTGCCATTCCACTTTGGCTTGGGTATGGGGTaGGCAACTTCTCACCAAGAGGTCCTCAGGAAGAGAAAGTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: FSGRALPFHFGLGMG*ATSHQEVLRKRKSW Trigger: CCAAGACTTTCTCTTCCTGAGGACCTCTTGGTGAGAAGTTGCCCACCCCATACCCAAGCCAAAGTGGAATGGCAGAGCCCTGCCAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS GCA 90 bp | CACCTGCCTTTAGTAGAAATGTTGCTTGGTTTTCTGGCAGGGCTCTaGCATTCCACTTTGGCTTGGGTATGGGGTGGGCAACTTCTCACC | + |
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Preference number: 5 (lower is better) Translates to: HLPLVEMLLGFLAGL*HSTLAWVWGGQLLT Trigger: GGTGAGAAGTTGCCCACCCCATACCCAAGCCAAAGTGGAATGGCAGAGCCCTGCCAGAAAACCAAGCAACATTTCTACTAAAGGCAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS GCA 90 bp | CCCAAATTTAGCCATCAGCAGAGAGCACATGTACATCCTAGGGGCTaGTGCTTGCAGCAGAAGATAATGCTTTTGCATGCATCTCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: PKFSHQQRAHVHPRG*CLQQKIMLLHASLS Trigger: GCTTAGAGATGCATGCAAAAGCATTATCTTCTGCTGCAAGCAGCAGCCCCTAGGATGTACATGTGCTCTCTGCTGATGGCTAAATTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS TCA 90 bp | CTAGGGTCTTCACTTCTGGGACTTCGCCAATGGCCAGTGCTCTTCTaGACTCCACATAGTGAAAGACAAATAGCATTCTTTCCAGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LGSSLLGLRQWPVLF*TPHSERQIAFFPVS Trigger: ACTGACTGGAAAGAATGCTATTTGTCTTTCACTATGTGGAGTTCAGAAGAGCACTGGCCATTGGCGAAGTCCCAGAAGTGAAGACCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS CCA 90 bp | AAATGCAATCCAGCCTGGAACTCTGTCTTCAAGGTGGGACTGACATaGCTAGTCCCTACAAGCTTCCATGATCCAAGTACAGATTTAATG | + |
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Preference number: 5 (lower is better) Translates to: KCNPAWNSVFKVGLT*LVPTSFHDPSTDLM Trigger: CATTAAATCTGTACTTGGATCATGGAAGCTTGTAGGGACTAGCCATGTCAGTCCCACCTTGAAGACAGAGTTCCAGGCTGGATTGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS TCA 90 bp | GAAAGTCTTGGGAGGAGGGGCAGCATGATAGATGAAACATCAGGTTaGAAAAGTCCAAGTATGTTCATCCTTGGTCTCATCTTTAATGTA | + |
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Preference number: 5 (lower is better) Translates to: ESLGRRGSMIDETSG*KSPSMFILGLIFNV Trigger: TACATTAAAGATGAGACCAAGGATGAACATACTTGGACTTTTTCAACCTGATGTTTCATCTATCATGCTGCCCCTCCTCCCAAGACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS CCA 90 bp | ACAACCACATTTTCCCGGCTGGTATTAAGCAAAGCTCCAATTCTGTaGATTCCTAAAGCCTATGCTCATATTTACTCAGCTATAAATTTG | + |
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Preference number: 5 (lower is better) Translates to: TTTFSRLVLSKAPIL*IPKAYAHIYSAINL Trigger: CAAATTTATAGCTGAGTAAATATGAGCATAGGCTTTAGGAATCCACAGAATTGGAGCTTTGCTTAATACCAGCCGGGAAAATGTGGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 72 bp | TCCTGGGTTGGGAGCCTGGGCAGGGTGGGTGTCAAGTaGCTCTGGCAACTGGACCCCTTCGGGGTTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SWVGSLGRVGVK*LWQLDPFGVAL Trigger: GAGGGCAACCCCGAAGGGGTCCAGTTGCCAGAGCCACTTGACACCCACCCTGCCCAGGCTCCCAACCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 72 bp | GGGTGTTGCGGCATTAATTCTCCTGGGTTGGGAGCCTaGGCAGGGTGGGTGTCAAGTGGCTCTGGCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: GCCGINSPGLGA*AGWVSSGSGNW Trigger: CCAGTTGCCAGAGCCACTTGACACCCACCCTGCCCAGGCTCCCAACCCAGGAGAATTAATGCCGCAACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 72 bp | GCTGGTTGCAGCAGGGAACTGGGCCTCGCTTGCATCTaGAGATCAGGGCTCTGTAGAGCCAGTACTTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: AGCSRELGLACI*RSGLCRASTCP Trigger: GGGGCAAGTACTGGCTCTACAGAGCCCTGATCTCCAGATGCAAGCGAGGCCCAGTTCCCTGCTGCAACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 72 bp | CTGGCAGGGCTCTGCCATTCCACTTTGGCTTGGGTATaGGGTGGGCAACTTCTCACCAAGAGGTCCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LAGLCHSTLAWV*GGQLLTKRSSG Trigger: TCCTGAGGACCTCTTGGTGAGAAGTTGCCCACCCCATACCCAAGCCAAAGTGGAATGGCAGAGCCCTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS GCA 72 bp | GGTGGGTCACAGGAGGTCCTAACGGGGAGGCAAATCTaGTTTAGCAGCAGCTCGTTTCAAGAGGCTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GGSQEVLTGRQI*FSSSSFQEAGC Trigger: ACACCCAGCCTCTTGAAACGAGCTGCTGCTAAAGCAGATTTGCCTCCCCGTTAGGACCTCCTGTGACCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 72 bp | GGTTTTCTGGCAGGGCTCTGCCATTCCACTTTGGCTTaGGTATGGGGTGGGCAACTTCTCACCAAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GFLAGLCHSTLA*VWGGQLLTKRS Trigger: GGACCTCTTGGTGAGAAGTTGCCCACCCCATACCCAAGCCAAAGTGGAATGGCAGAGCCCTGCCAGAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS GCA 72 bp | TGCTTTAGCAGCAGCTCGTTTCAAGAGGCTGGGTGTTaGGGCATTAATTCTCCTGGGTTGGGAGCCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CFSSSSFQEAGC*GINSPGLGAWA Trigger: TGCCCAGGCTCCCAACCCAGGAGAATTAATGCCGCAACACCCAGCCTCTTGAAACGAGCTGCTGCTAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 72 bp | CGGTTCACGCAGAGAGCACCCCAGGCAGCCACGAACTaGCTTGCTCCGTTCAGATTTCTCTTAAACAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RFTQRAPQAATN*LAPFRFLLNSS Trigger: ACTGCTGTTTAAGAGAAATCTGAACGGAGCAAGCCAGTTCGTGGCTGCCTGGGGTGCTCTCTGCGTGAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS GCA 72 bp | CACGCAGAGAGCACCCCAGGCAGCCACGAACTGGCTTaGTCCGTTCAGATTTCTCTTAAACAGCAGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: HAESTPGSHELA*SVQISLKQQFS Trigger: GGAAAACTGCTGTTTAAGAGAAATCTGAACGGAGCAAGCCAGTTCGTGGCTGCCTGGGGTGCTCTCTGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 72 bp | GACTGTGAGGGACACTCACAGTATGATGACTGTGGCTaGCTAGTCTACCATGGGGACAGGAATGAGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: DCEGHSQYDDCG*LVYHGDRNEGG Trigger: CCCACCCTCATTCCTGTCCCCATGGTAGACTAGCAAGCCACAGTCATCATACTGTGAGTGTCCCTCACAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 90 bp | ATAGCAAGTGACTGTGAGGGACACTCACAGTATGATGACTGTGGCTaGCTAGTCTACCATGGGGACAGGAATGAGGGTGGGTCACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: IASDCEGHSQYDDCG*LVYHGDRNEGGSQE Trigger: CTCCTGTGACCCACCCTCATTCCTGTCCCCATGGTAGACTAGCAAGCCACAGTCATCATACTGTGAGTGTCCCTCACAGTCACTTGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS GCA 72 bp | TTTTATGGGAATGGAAATGATTCACGGAGAGCTGGTTaGAGCAGGGAACTGGGCCTCGCTTGCATCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FYGNGNDSRRAG*SRELGLACIWR Trigger: TCTCCAGATGCAAGCGAGGCCCAGTTCCCTGCTGCAACCAGCTCTCCGTGAATCATTTCCATTCCCATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CCA 72 bp | CCAGCCTGGAACTCTGTCTTCAAGGTGGGACTGACATaGCTAGTCCCTACAAGCTTCCATGATCCAAGTACA | + |
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Preference number: 6 (lower is better) Translates to: PAWNSVFKVGLT*LVPTSFHDPST Trigger: TGTACTTGGATCATGGAAGCTTGTAGGGACTAGCCATGTCAGTCCCACCTTGAAGACAGAGTTCCAGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 72 bp | GTCCTTGGCTTAACCCTGTGCACTTGCCAGGCCCTTTaGCCATGTCACCTGGAAAAAGCTGCTGACTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VLGLTLCTCQAL*PCHLEKAADLK Trigger: TTTCAAGTCAGCAGCTTTTTCCAGGTGACATGGCAAAAGGGCCTGGCAAGTGCACAGGGTTAAGCCAAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 90 bp | GTATTGATAGTCCTTGGCTTAACCCTGTGCACTTGCCAGGCCCTTTaGCCATGTCACCTGGAAAAAGCTGCTGACTTGAAAGGTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: VLIVLGLTLCTCQAL*PCHLEKAADLKGDR Trigger: CCTGTCACCTTTCAAGTCAGCAGCTTTTTCCAGGTGACATGGCAAAAGGGCCTGGCAAGTGCACAGGGTTAAGCCAAGGACTATCAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS GCA 72 bp | GCAGTATTGATAGTCCTTGGCTTAACCCTGTGCACTTaGCAGGCCCTTTTGCCATGTCACCTGGAAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: AVLIVLGLTLCT*QALLPCHLEKA Trigger: AGCTTTTTCCAGGTGACATGGCAAAAGGGCCTGGCAAGTGCACAGGGTTAAGCCAAGGACTATCAATACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS GCA 72 bp | AGCCATCAGCAGAGAGCACATGTACATCCTAGGGGCTaGTGCTTGCAGCAGAAGATAATGCTTTTGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: SHQQRAHVHPRG*CLQQKIMLLHA Trigger: TGCATGCAAAAGCATTATCTTCTGCTGCAAGCAGCAGCCCCTAGGATGTACATGTGCTCTCTGCTGATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS GCA 72 bp | TTAGTAGAAATGTTGCTTGGTTTTCTGGCAGGGCTCTaGCATTCCACTTTGGCTTGGGTATGGGGTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LVEMLLGFLAGL*HSTLAWVWGGQ Trigger: TTGCCCACCCCATACCCAAGCCAAAGTGGAATGGCAGAGCCCTGCCAGAAAACCAAGCAACATTTCTACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS CAA 72 bp | AGCAGTATTGATAGTCCTTGGCTTAACCCTGTGCACTaGCCAGGCCCTTTTGCCATGTCACCTGGAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSIDSPWLNPVH*PGPFAMSPGKS Trigger: GCTTTTTCCAGGTGACATGGCAAAAGGGCCTGGCAAGTGCACAGGGTTAAGCCAAGGACTATCAATACTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS GCA 72 bp | AATGTTTCCTGTGTGTCAGCCATGGCACTGGGGCTTTaGATACATTTCTCGTCTGATGCTAGCAACAACCTG | + |
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Preference number: 6 (lower is better) Translates to: NVSCVSAMALGL*IHFSSDASNNL Trigger: CAGGTTGTTGCTAGCATCAGACGAGAAATGTATGCAAAGCCCCAGTGCCATGGCTGACACACAGGAAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS GCA 72 bp | CATCAGCAGAGAGCACATGTACATCCTAGGGGCTGCTaGTTGCAGCAGAAGATAATGCTTTTGCATGCATCT | + |
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Preference number: 6 (lower is better) Translates to: HQQRAHVHPRGC*LQQKIMLLHAS Trigger: AGATGCATGCAAAAGCATTATCTTCTGCTGCAAGCAGCAGCCCCTAGGATGTACATGTGCTCTCTGCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS CAA 72 bp | CAGCAGAGAGCACATGTACATCCTAGGGGCTGCTGCTaGCAGCAGAAGATAATGCTTTTGCATGCATCTCTA | + |
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Preference number: 6 (lower is better) Translates to: QQRAHVHPRGCC*QQKIMLLHASL Trigger: TAGAGATGCATGCAAAAGCATTATCTTCTGCTGCAAGCAGCAGCCCCTAGGATGTACATGTGCTCTCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS CAA 72 bp | TGCTGCTCTTCATCTGGGGATTTTCTCACTGGCATTTaGCTACTTCCTGTTTCCCAAGAGTCTCTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CCSSSGDFLTGI*LLPVSQESLLS Trigger: AGAGAGCAGAGACTCTTGGGAAACAGGAAGTAGCAAAATGCCAGTGAGAAAATCCCCAGATGAAGAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 72 bp | TTCTTCTTCTTTGTGGGGAGGATTCCTCCCTGCCTCTaGGAGCTTAGCAGCACTAAGAAATGTCATCCTAAG | + |
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Preference number: 6 (lower is better) Translates to: FFFFVGRIPPCL*ELSSTKKCHPK Trigger: CTTAGGATGACATTTCTTAGTGCTGCTAAGCTCCAAGAGGCAGGGAGGAATCCTCCCCACAAAGAAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 90 bp | TTGGATTTGAAAATCAGGCCCAGGGAGCTTGCTGAGAGCTTCGGATaGATTACGCTAAACATTCCACAGGAACTTGAGTTGTACGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LDLKIRPRELAESFG*ITLNIPQELELYGV Trigger: TACACCGTACAACTCAAGTTCCTGTGGAATGTTTAGCGTAATCAATCCGAAGCTCTCAGCAAGCTCCCTGGGCCTGATTTTCAAATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS TCA 72 bp | GGGAGGAGGGGCAGCATGATAGATGAAACATCAGGTTaGAAAAGTCCAAGTATGTTCATCCTTGGTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: GRRGSMIDETSG*KSPSMFILGLI Trigger: GATGAGACCAAGGATGAACATACTTGGACTTTTTCAACCTGATGTTTCATCTATCATGCTGCCCCTCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS TCA 72 bp | TCACTTCTGGGACTTCGCCAATGGCCAGTGCTCTTCTaGACTCCACATAGTGAAAGACAAATAGCATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLLGLRQWPVLF*TPHSERQIAFF Trigger: AAAGAATGCTATTTGTCTTTCACTATGTGGAGTTCAGAAGAGCACTGGCCATTGGCGAAGTCCCAGAAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431020.1 ENST00000648144.1 |
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| CDS TCA 72 bp | AAGAGAAAGTCTTGGGAGGAGGGGCAGCATGATAGATaGAACATCAGGTTGAAAAAGTCCAAGTATGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: KRKSWEEGQHDR*NIRLKKSKYVH Trigger: ATGAACATACTTGGACTTTTTCAACCTGATGTTTCATCTATCATGCTGCCCCTCCTCCCAAGACTTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648144.1 |
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| CDS CCA 72 bp | TTTTCCCGGCTGGTATTAAGCAAAGCTCCAATTCTGTaGATTCCTAAAGCCTATGCTCATATTTACTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: FSRLVLSKAPIL*IPKAYAHIYSA Trigger: AGCTGAGTAAATATGAGCATAGGCTTTAGGAATCCACAGAATTGGAGCTTTGCTTAATACCAGCCGGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 72 bp | CTTAGAGAAACTTTCCACCTAACCACTGCTGTCACCTaGCTACTTCCTACCCTAGCTTTGTACATTTTATCA | + |
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Preference number: 6 (lower is better) Translates to: LRETFHLTTAVT*LLPTLALYILS Trigger: TGATAAAATGTACAAAGCTAGGGTAGGAAGTAGCAAGGTGACAGCAGTGGTTAGGTGGAAAGTTTCTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 90 bp | GTTCTTTCTCTTAGAGAAACTTTCCACCTAACCACTGCTGTCACCTaGCTACTTCCTACCCTAGCTTTGTACATTTTATCAAGGGTATTA | + |
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Preference number: 6 (lower is better) Translates to: VLSLRETFHLTTAVT*LLPTLALYILSRVL Trigger: TAATACCCTTGATAAAATGTACAAAGCTAGGGTAGGAAGTAGCAAGGTGACAGCAGTGGTTAGGTGGAAAGTTTCTCTAAGAGAAAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 72 bp | ACCACTGCTGTCACCTTGCTACTTCCTACCCTAGCTTaGTACATTTTATCAAGGGTATTAGAAATAATTCCC | + |
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Preference number: 6 (lower is better) Translates to: TTAVTLLLPTLA*YILSRVLEIIP Trigger: GGGAATTATTTCTAATACCCTTGATAAAATGTACAAAGCTAGGGTAGGAAGTAGCAAGGTGACAGCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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| CDS CAA 90 bp | GAGAGCTTCGGATTGATTACGCTAAACATTCCACAGGAACTTGAGTaGTACGGTGTAATCACAAATCACATAAATGATTGTTTTATTAGA | + |
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Preference number: 6 (lower is better) Translates to: ESFGLITLNIPQELE*YGVITNHINDCFIR Trigger: TCTAATAAAACAATCATTTATGTGATTTGTGATTACACCGTACAACTCAAGTTCCTGTGGAATGTTTAGCGTAATCAATCCGAAGCTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431020.1 |
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