Pregenerated sensors for LINC00305 (Homo sapiens)
Ensembl gene IDs: ENSG00000179676Ensembl transcript IDs: ENST00000323355.3, ENST00000454647.1, ENST00000456505.1, ENST00000657385.1, ENST00000657912.1, ENST00000658718.1, ENST00000659895.1, ENST00000662600.1, ENST00000663021.1, ENST00000665443.1, ENST00000665461.1, ENST00000666468.1, ENST00000668958.1, ENST00000669361.1, ENST00000669878.1, ENST00000671534.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCAGGTGGTGGATGGCTGGGTCCCTGCTCTCTCTGGATGGCTTTCTaGTCTCTCAACCTGCCTGAGTCAAGTCGTCCAAGCTCCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PGGGWLGPCSLWMAF*SLNLPESSRPSSFR Trigger: CCTGAAGGAGCTTGGACGACTTGACTCAGGCAGGTTGAGAGACCAGAAAGCCATCCAGAGAGAGCAGGGACCCAGCCATCCACCACCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657385.1 ENST00000657912.1 ENST00000658718.1 ENST00000669361.1 ENST00000671534.1 |
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| CDS GCA 90 bp | TGGGAATCTGGGGTGGCCAGAGTCCCTGAAGCTCCATGGTTTGCATaGAGGCTGTTAGTGGAAGCACCCACAGAAAACACACTCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: WESGVARVPEAPWFA*RLLVEAPTENTLSS Trigger: CGAGGAGAGTGTGTTTTCTGTGGGTGCTTCCACTAACAGCCTGCATGCAAACCATGGAGCTTCAGGGACTCTGGCCACCCCAGATTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665443.1 ENST00000665461.1 |
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| CDS CCA 90 bp | CCTCCACATGGTTCCAGGGGAACAGCTGGGACTTCAGACACGATATaGCAGAAGCTCAGCCAGAAGAGCCTCCTGTTGTCACTGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PPHGSRGTAGTSDTI*QKLSQKSLLLSLLP Trigger: TGGCAACAGTGACAACAGGAGGCTCTTCTGGCTGAGCTTCTGCCATATCGTGTCTGAAGTCCCAGCTGTTCCCCTGGAACCATGTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CCA 90 bp | AGAGGACAAGGGGTGTTTGCTGTGGGCATAGCAGTGCTGGAAAAATaGCTGAGGTGTCATGCCCAGGAAGTGCTGAGGACTCTCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: RGQGVFAVGIAVLEK*LRCHAQEVLRTLWV Trigger: CACCCAGAGAGTCCTCAGCACTTCCTGGGCATGACACCTCAGCCATTTTTCCAGCACTGCTATGCCCACAGCAAACACCCCTTGTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS TCA 90 bp | CCTGCATGCTCTAAAGAAATGGGAATCTGGGGTGGCCAGAGTCCCTaGAGCTCCATGGTTTGCATGCAGGCTGTTAGTGGAAGCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: PACSKEMGIWGGQSP*SSMVCMQAVSGSTH Trigger: GTGGGTGCTTCCACTAACAGCCTGCATGCAAACCATGGAGCTTCAGGGACTCTGGCCACCCCAGATTCCCATTTCTTTAGAGCATGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665461.1 |
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| CDS GCA 90 bp | GAGGTGTCATGCCCAGGAAGTGCTGAGGACTCTCTGGGTGGCTTCTaGCTTAGTCTTTTGAGGGTGACACCATCCCAGCATGACTTCACA | + |
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Preference number: 5 (lower is better) Translates to: EVSCPGSAEDSLGGF*LSLLRVTPSQHDFT Trigger: TGTGAAGTCATGCTGGGATGGTGTCACCCTCAAAAGACTAAGGCAGAAGCCACCCAGAGAGTCCTCAGCACTTCCTGGGCATGACACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS GCA 90 bp | GTTTGCTGTGGGCATAGCAGTGCTGGAAAAATGGCTGAGGTGTCATaGCCAGGAAGTGCTGAGGACTCTCTGGGTGGCTTCTGCCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: VCCGHSSAGKMAEVS*PGSAEDSLGGFCLS Trigger: ACTAAGGCAGAAGCCACCCAGAGAGTCCTCAGCACTTCCTGGGCATGACACCTCAGCCATTTTTCCAGCACTGCTATGCCCACAGCAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CCA 90 bp | TCCACGCCAGGTTTCCTTGTGAAGGGCAGTCTGGTTCCTCTGGTGTaGTCAATCTTAGGCTTTCAGGATGCCTCAGCTGGTTTCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: STPGFLVKGSLVPLV*SILGFQDASAGFSG Trigger: ACCACTGAAACCAGCTGAGGCATCCTGAAAGCCTAAGATTGACCACACCAGAGGAACCAGACTGCCCTTCACAAGGAAACCTGGCGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657385.1 ENST00000657912.1 ENST00000658718.1 ENST00000669361.1 ENST00000671534.1 |
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| CDS GCA 90 bp | GGGCAGTCTGGTTCCTCTGGTGTGGTCAATCTTAGGCTTTCAGGATaGCTCAGCTGGTTTCAGTGGTCCTGGAATCTGTGTTGGATGCAA | + |
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Preference number: 5 (lower is better) Translates to: GQSGSSGVVNLRLSG*LSWFQWSWNLCWMQ Trigger: TTGCATCCAACACAGATTCCAGGACCACTGAAACCAGCTGAGGCATCCTGAAAGCCTAAGATTGACCACACCAGAGGAACCAGACTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000323355.3 ENST00000456505.1 ENST00000657385.1 ENST00000658718.1 ENST00000666468.1 ENST00000668958.1 ENST00000671534.1 |
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| CDS GCA 90 bp | GGGCAGTCTGGTTCCTCTGGTGTGGTCAATCTTAGGCTTTCAGGATaGCTCAGCTGGTTTCAGTGGTCCTGGAATAAGAAAGGGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: GQSGSSGVVNLRLSG*LSWFQWSWNKKGTL Trigger: CAAGGTCCCTTTCTTATTCCAGGACCACTGAAACCAGCTGAGGCATCCTGAAAGCCTAAGATTGACCACACCAGAGGAACCAGACTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657912.1 ENST00000659895.1 ENST00000669361.1 |
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| CDS GCA 90 bp | CAGAGAAGAGAAGGTCTTGGTTCCTACCAGAGGACAAGGGGTGTTTaGTGTGGGCATAGCAGTGCTGGAAAAATGGCTGAGGTGTCATGC | + |
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Preference number: 5 (lower is better) Translates to: QRREGLGSYQRTRGV*CGHSSAGKMAEVSC Trigger: GCATGACACCTCAGCCATTTTTCCAGCACTGCTATGCCCACAGCAAACACCCCTTGTCCTCTGGTAGGAACCAAGACCTTCTCTTCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CCA 90 bp | TTCAGGAGTCTTCCCCTTGTGAAGGGCAGTCTGGTTCCTCTGGTGTaGTCAATCTTAGGCTTTCAGGATGCCTCAGCTGGTTTCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: FRSLPLVKGSLVPLV*SILGFQDASAGFSG Trigger: ACCACTGAAACCAGCTGAGGCATCCTGAAAGCCTAAGATTGACCACACCAGAGGAACCAGACTGCCCTTCACAAGGGGAAGACTCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456505.1 ENST00000668958.1 |
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| CDS CCA 90 bp | TGGCTGTGTGCTATGCTTGTGAAGGGCAGTCTGGTTCCTCTGGTGTaGTCAATCTTAGGCTTTCAGGATGCCTCAGCTGGTTTCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: WLCAMLVKGSLVPLV*SILGFQDASAGFSG Trigger: ACCACTGAAACCAGCTGAGGCATCCTGAAAGCCTAAGATTGACCACACCAGAGGAACCAGACTGCCCTTCACAAGCATAGCACACAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CCA 90 bp | GTCGAGAGAATTAGTGATTCCTCCACATGGTTCCAGGGGAACAGCTaGGACTTCAGACACGATATGGCAGAAGCTCAGCCAGAAGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: VERISDSSTWFQGNS*DFRHDMAEAQPEEP Trigger: AGGCTCTTCTGGCTGAGCTTCTGCCATATCGTGTCTGAAGTCCCAGCTGTTCCCCTGGAACCATGTGGAGGAATCACTAATTCTCTCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS TCA 90 bp | CTCCTGCTTTCCCTTTTCATCTTTGCAGGTCGCAGAGATGGCTACTaGGATAAGGGACAGGAGAGTGGAGAGCAAGGTGGCAACAACATG | + |
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Preference number: 5 (lower is better) Translates to: LLLSLFIFAGRRDGY*DKGQESGEQGGNNM Trigger: CATGTTGTTGCCACCTTGCTCTCCACTCTCCTGTCCCTTATCTCAGTAGCCATCTCTGCGACCTGCAAAGATGAAAAGGGAAAGCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454647.1 |
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| CDS TCA 90 bp | TCTTGTTTCTCTAAAGAAATGGGAATCTGGGGTGGCCAGAGTCCCTaGAGCTCCATGGTTTGCATGCAGGCTGTTAGTGGAAGCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: SCFSKEMGIWGGQSP*SSMVCMQAVSGSTH Trigger: GTGGGTGCTTCCACTAACAGCCTGCATGCAAACCATGGAGCTTCAGGGACTCTGGCCACCCCAGATTCCCATTTCTTTAGAGAAACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665443.1 |
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| CDS CCA 90 bp | CTTTCAGGATGCCTCAGCTGGTTTCAGTGGTCCTGGAATCTGTGTTaGATGCAAGGCAGGCTGGATTTGTACTTGTGCCACTCTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: LSGCLSWFQWSWNLC*MQGRLDLYLCHSVS Trigger: ACTCACAGAGTGGCACAAGTACAAATCCAGCCTGCCTTGCATCCAACACAGATTCCAGGACCACTGAAACCAGCTGAGGCATCCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000323355.3 ENST00000657385.1 ENST00000658718.1 ENST00000666468.1 ENST00000668958.1 ENST00000671534.1 |
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| CDS CCA 90 bp | CTAAAGAAATGGGAATCTGGGGTGGCCAGAGTCCCTGAAGCTCCATaGTTTGCATGCAGGCTGTTAGTGGAAGCACCCACAGAAAACACA | + |
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Preference number: 5 (lower is better) Translates to: LKKWESGVARVPEAP*FACRLLVEAPTENT Trigger: TGTGTTTTCTGTGGGTGCTTCCACTAACAGCCTGCATGCAAACCATGGAGCTTCAGGGACTCTGGCCACCCCAGATTCCCATTTCTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665443.1 ENST00000665461.1 |
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| CDS CCA 90 bp | GCTGTGCTGACAAGCAAAGTCGAGAGAATTAGTGATTCCTCCACATaGTTCCAGGGGAACAGCTGGGACTTCAGACACGATATGGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: AVLTSKVERISDSST*FQGNSWDFRHDMAE Trigger: TTCTGCCATATCGTGTCTGAAGTCCCAGCTGTTCCCCTGGAACCATGTGGAGGAATCACTAATTCTCTCGACTTTGCTTGTCAGCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS TCA 90 bp | CACTGTTGCCAATTTTGGGTTGTTTACATCCCTTTGCTCATTACCTaGGAAGCCTCAGAGGGAAGTCTCAGAGCAGTCTCAGAGGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: HCCQFWVVYIPLLIT*EASEGSLRAVSEVG Trigger: GCCAACCTCTGAGACTGCTCTGAGACTTCCCTCTGAGGCTTCTCAGGTAATGAGCAAAGGGATGTAAACAACCCAAAATTGGCAACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CCA 90 bp | CAGATAATTTCCATCCTTGTGAAGGGCAGTCTGGTTCCTCTGGTGTaGTCAATCTTAGGCTTTCAGGATGCCTCAGCTGGTTTCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: QIISILVKGSLVPLV*SILGFQDASAGFSG Trigger: ACCACTGAAACCAGCTGAGGCATCCTGAAAGCCTAAGATTGACCACACCAGAGGAACCAGACTGCCCTTCACAAGGATGGAAATTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323355.3 ENST00000666468.1 |
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| CDS GCA 90 bp | CTCGCAGCAGGAAGTATGGCTCTGAAAGCACTTCTCCGTTTCCAATaGAGGGTGACTGGAGTGTTTTTCTACATCCTGATTAGTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LAAGSMALKALLRFQ*RVTGVFFYILISAS Trigger: TGAAGCACTAATCAGGATGTAGAAAAACACTCCAGTCACCCTGCATTGGAAACGGAGAAGTGCTTTCAGAGCCATACTTCCTGCTGCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000657385.1 ENST00000669361.1 ENST00000671534.1 |
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| CDS CCA 90 bp | TTGAACACATCAGTCCAGCATTGTCTGAAGCGTACATCATATCTTTaGGTGAGGCAAGTTCAGGAGTCTTCCCCTTGTGAAGGGCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LNTSVQHCLKRTSYL*VRQVQESSPCEGQS Trigger: AGACTGCCCTTCACAAGGGGAAGACTCCTGAACTTGCCTCACCCAAAGATATGATGTACGCTTCAGACAATGCTGGACTGATGTGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456505.1 ENST00000668958.1 |
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| CDS TCA 90 bp | CAAAGTCCCTGCCGTTTATCCAAAGGTGCTTCACAGTATGACCTCTaGTCTCTCCCTAACTTGTCATCTTCTCTGTTTTCAAAGAAACAG | + |
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Preference number: 5 (lower is better) Translates to: QSPCRLSKGASQYDL*SLPNLSSSLFSKKQ Trigger: CTGTTTCTTTGAAAACAGAGAAGATGACAAGTTAGGGAGAGATCAGAGGTCATACTGTGAAGCACCTTTGGATAAACGGCAGGGACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000323355.3 ENST00000657385.1 ENST00000657912.1 ENST00000658718.1 ENST00000662600.1 ENST00000663021.1 ENST00000665443.1 ENST00000665461.1 ENST00000666468.1 ENST00000669361.1 ENST00000669878.1 ENST00000671534.1 |
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| CDS TCA 90 bp | CAAAATACAGAGCTTAGTAAAGTTAACTTTAGACCACATTCCCACTaGGTGGCAGATTCTGAATTAGTATGCAGTGTAGCCTGGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: QNTELSKVNFRPHSH*VADSELVCSVAWLH Trigger: ATGGAGCCAGGCTACACTGCATACTAATTCAGAATCTGCCACTCAGTGGGAATGTGGTCTAAAGTTAACTTTACTAAGCTCTGTATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS GCA 72 bp | GGGCATAGCAGTGCTGGAAAAATGGCTGAGGTGTCATaGCCAGGAAGTGCTGAGGACTCTCTGGGTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GHSSAGKMAEVS*PGSAEDSLGGF Trigger: GAAGCCACCCAGAGAGTCCTCAGCACTTCCTGGGCATGACACCTCAGCCATTTTTCCAGCACTGCTATGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CCA 72 bp | TGGGAATCTGGGGTGGCCAGAGTCCCTGAAGCTCCATaGTTTGCATGCAGGCTGTTAGTGGAAGCACCCACA | + |
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Preference number: 6 (lower is better) Translates to: WESGVARVPEAP*FACRLLVEAPT Trigger: TGTGGGTGCTTCCACTAACAGCCTGCATGCAAACCATGGAGCTTCAGGGACTCTGGCCACCCCAGATTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665443.1 ENST00000665461.1 |
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| CDS GCA 72 bp | GGGGTGGCCAGAGTCCCTGAAGCTCCATGGTTTGCATaGAGGCTGTTAGTGGAAGCACCCACAGAAAACACA | + |
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Preference number: 6 (lower is better) Translates to: GVARVPEAPWFA*RLLVEAPTENT Trigger: TGTGTTTTCTGTGGGTGCTTCCACTAACAGCCTGCATGCAAACCATGGAGCTTCAGGGACTCTGGCCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665443.1 ENST00000665461.1 |
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| CDS CCA 72 bp | GGGGTGTTTGCTGTGGGCATAGCAGTGCTGGAAAAATaGCTGAGGTGTCATGCCCAGGAAGTGCTGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: GVFAVGIAVLEK*LRCHAQEVLRT Trigger: AGTCCTCAGCACTTCCTGGGCATGACACCTCAGCCATTTTTCCAGCACTGCTATGCCCACAGCAAACACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS GCA 72 bp | GAAGGTCTTGGTTCCTACCAGAGGACAAGGGGTGTTTaGTGTGGGCATAGCAGTGCTGGAAAAATGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: EGLGSYQRTRGV*CGHSSAGKMAE Trigger: CTCAGCCATTTTTCCAGCACTGCTATGCCCACAGCAAACACCCCTTGTCCTCTGGTAGGAACCAAGACCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CAA 90 bp | GCTTTCAGGATGCCTCAGCTGGTTTCAGTGGTCCTGGAATCTGTGTaGGATGCAAGGCAGGCTGGATTTGTACTTGTGCCACTCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AFRMPQLVSVVLESV*DARQAGFVLVPLCE Trigger: CTCACAGAGTGGCACAAGTACAAATCCAGCCTGCCTTGCATCCAACACAGATTCCAGGACCACTGAAACCAGCTGAGGCATCCTGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000323355.3 ENST00000657385.1 ENST00000658718.1 ENST00000666468.1 ENST00000668958.1 ENST00000671534.1 |
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| CDS TCA 72 bp | TCTAAAGAAATGGGAATCTGGGGTGGCCAGAGTCCCTaGAGCTCCATGGTTTGCATGCAGGCTGTTAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SKEMGIWGGQSP*SSMVCMQAVSG Trigger: TCCACTAACAGCCTGCATGCAAACCATGGAGCTTCAGGGACTCTGGCCACCCCAGATTCCCATTTCTTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665443.1 ENST00000665461.1 |
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| CDS CCA 72 bp | ATTAGTGATTCCTCCACATGGTTCCAGGGGAACAGCTaGGACTTCAGACACGATATGGCAGAAGCTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ISDSSTWFQGNS*DFRHDMAEAQP Trigger: TGGCTGAGCTTCTGCCATATCGTGTCTGAAGTCCCAGCTGTTCCCCTGGAACCATGTGGAGGAATCACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CCA 72 bp | GGTGTGGTCAATCTTAGGCTTTCAGGATGCCTCAGCTaGTTTCAGTGGTCCTGGAATCTGTGTTGGATGCAA | + |
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Preference number: 6 (lower is better) Translates to: GVVNLRLSGCLS*FQWSWNLCWMQ Trigger: TTGCATCCAACACAGATTCCAGGACCACTGAAACCAGCTGAGGCATCCTGAAAGCCTAAGATTGACCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000323355.3 ENST00000456505.1 ENST00000657385.1 ENST00000658718.1 ENST00000666468.1 ENST00000668958.1 ENST00000671534.1 |
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| CDS CCA 72 bp | CCTTTTGAAAGGTTCTTCCTGCATGCTCTAAAGAAATaGGAATCTGGGGTGGCCAGAGTCCCTGAAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PFERFFLHALKK*ESGVARVPEAP Trigger: TGGAGCTTCAGGGACTCTGGCCACCCCAGATTCCCATTTCTTTAGAGCATGCAGGAAGAACCTTTCAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665461.1 |
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| CDS CCA 72 bp | GGTGTGGTCAATCTTAGGCTTTCAGGATGCCTCAGCTaGTTTCAGTGGTCCTGGAATAAGAAAGGGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: GVVNLRLSGCLS*FQWSWNKKGTL Trigger: CAAGGTCCCTTTCTTATTCCAGGACCACTGAAACCAGCTGAGGCATCCTGAAAGCCTAAGATTGACCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657912.1 ENST00000659895.1 ENST00000669361.1 |
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| CDS CAA 90 bp | GCTCAGCCAGAAGAGCCTCCTGTTGTCACTGTTGCCAATTTTGGGTaGTTTACATCCCTTTGCTCATTACCTGAGAAGCCTCAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AQPEEPPVVTVANFG*FTSLCSLPEKPQRE Trigger: TTCCCTCTGAGGCTTCTCAGGTAATGAGCAAAGGGATGTAAACAACCCAAAATTGGCAACAGTGACAACAGGAGGCTCTTCTGGCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CCA 72 bp | CAGATAATTTCCATCCTGTGGCAAAACACTTTGCTGTaGATGGACGCACTGCTAATGACCTCGCAGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: QIISILWQNTLL*MDALLMTSQQE Trigger: TTCCTGCTGCGAGGTCATTAGCAGTGCGTCCATCCACAGCAAAGTGTTTTGCCACAGGATGGAAATTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657385.1 ENST00000669361.1 ENST00000671534.1 |
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| CDS CCA 72 bp | ACAAGCAAAGTCGAGAGAATTAGTGATTCCTCCACATaGTTCCAGGGGAACAGCTGGGACTTCAGACACGAT | + |
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Preference number: 6 (lower is better) Translates to: TSKVERISDSST*FQGNSWDFRHD Trigger: ATCGTGTCTGAAGTCCCAGCTGTTCCCCTGGAACCATGTGGAGGAATCACTAATTCTCTCGACTTTGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CAA 72 bp | ACGATATGGCAGAAGCTCAGCCAGAAGAGCCTCCTGTaGTCACTGTTGCCAATTTTGGGTTGTTTACATCCC | + |
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Preference number: 6 (lower is better) Translates to: TIWQKLSQKSLL*SLLPILGCLHP Trigger: GGGATGTAAACAACCCAAAATTGGCAACAGTGACAACAGGAGGCTCTTCTGGCTGAGCTTCTGCCATATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CAA 90 bp | CAGAAGCTCAGCCAGAAGAGCCTCCTGTTGTCACTGTTGCCAATTTaGGGTTGTTTACATCCCTTTGCTCATTACCTGAGAAGCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: QKLSQKSLLLSLLPI*GCLHPFAHYLRSLR Trigger: TCTGAGGCTTCTCAGGTAATGAGCAAAGGGATGTAAACAACCCAAAATTGGCAACAGTGACAACAGGAGGCTCTTCTGGCTGAGCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CAA 90 bp | ACGATATGGCAGAAGCTCAGCCAGAAGAGCCTCCTGTTGTCACTGTaGCCAATTTTGGGTTGTTTACATCCCTTTGCTCATTACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: TIWQKLSQKSLLLSL*PILGCLHPFAHYLR Trigger: TCTCAGGTAATGAGCAAAGGGATGTAAACAACCCAAAATTGGCAACAGTGACAACAGGAGGCTCTTCTGGCTGAGCTTCTGCCATATCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CAA 90 bp | ACTTCAGACACGATATGGCAGAAGCTCAGCCAGAAGAGCCTCCTGTaGTCACTGTTGCCAATTTTGGGTTGTTTACATCCCTTTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: TSDTIWQKLSQKSLL*SLLPILGCLHPFAH Trigger: ATGAGCAAAGGGATGTAAACAACCCAAAATTGGCAACAGTGACAACAGGAGGCTCTTCTGGCTGAGCTTCTGCCATATCGTGTCTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CAA 72 bp | CAGAAGCTCAGCCAGAAGAGCCTCCTGTTGTCACTGTaGCCAATTTTGGGTTGTTTACATCCCTTTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: QKLSQKSLLLSL*PILGCLHPFAH Trigger: ATGAGCAAAGGGATGTAAACAACCCAAAATTGGCAACAGTGACAACAGGAGGCTCTTCTGGCTGAGCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS GCA 72 bp | GGAAGTATGGCTCTGAAAGCACTTCTCCGTTTCCAATaGAGGGTGACTGGAGTGTTTTTCTACATCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: GSMALKALLRFQ*RVTGVFFYILI Trigger: AATCAGGATGTAGAAAAACACTCCAGTCACCCTGCATTGGAAACGGAGAAGTGCTTTCAGAGCCATACTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000657385.1 ENST00000669361.1 ENST00000671534.1 |
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| CDS GCA 72 bp | GTCACTGTTGCCAATTTTGGGTTGTTTACATCCCTTTaGTCATTACCTGAGAAGCCTCAGAGGGAAGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VTVANFGLFTSL*SLPEKPQREVS Trigger: TGAGACTTCCCTCTGAGGCTTCTCAGGTAATGAGCAAAGGGATGTAAACAACCCAAAATTGGCAACAGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CAA 72 bp | GAAGAGCCTCCTGTTGTCACTGTTGCCAATTTTGGGTaGTTTACATCCCTTTGCTCATTACCTGAGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EEPPVVTVANFG*FTSLCSLPEKP Trigger: AGGCTTCTCAGGTAATGAGCAAAGGGATGTAAACAACCCAAAATTGGCAACAGTGACAACAGGAGGCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS TCA 72 bp | TGCCGTTTATCCAAAGGTGCTTCACAGTATGACCTCTaGTCTCTCCCTAACTTGTCATCTTCTCTGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: CRLSKGASQYDL*SLPNLSSSLFS Trigger: TGAAAACAGAGAAGATGACAAGTTAGGGAGAGATCAGAGGTCATACTGTGAAGCACCTTTGGATAAACGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000323355.3 ENST00000657385.1 ENST00000657912.1 ENST00000658718.1 ENST00000662600.1 ENST00000663021.1 ENST00000665443.1 ENST00000665461.1 ENST00000666468.1 ENST00000669361.1 ENST00000669878.1 ENST00000671534.1 |
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| CDS TCA 72 bp | TTCCTTGCTTCCTTCAGGTCTCTGGTTGTAACCTTTTaGAAGGTTCTTCCTGCATGCTCTAAAGAAATGGGA | + |
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Preference number: 6 (lower is better) Translates to: FLASFRSLVVTF*KVLPACSKEMG Trigger: TCCCATTTCTTTAGAGCATGCAGGAAGAACCTTTCAAAAGGTTACAACCAGAGACCTGAAGGAAGCAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665461.1 |
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| CDS TCA 72 bp | GAGCTTAGTAAAGTTAACTTTAGACCACATTCCCACTaGGTGGCAGATTCTGAATTAGTATGCAGTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: ELSKVNFRPHSH*VADSELVCSVA Trigger: GGCTACACTGCATACTAATTCAGAATCTGCCACTCAGTGGGAATGTGGTCTAAAGTTAACTTTACTAAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659895.1 |
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| CDS CAA 72 bp | TGGTGCATTTGTTTAATTGAACACATCAGTCCAGCATaGTCTGAAGCGTACATCATATCTTTGGGTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: WCICLIEHISPA*SEAYIISLGEA Trigger: TGCCTCACCCAAAGATATGATGTACGCTTCAGACAATGCTGGACTGATGTGTTCAATTAAACAAATGCACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456505.1 ENST00000668958.1 |
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| CDS CAA 90 bp | GCATTTTATTGGTGCATTTGTTTAATTGAACACATCAGTCCAGCATaGTCTGAAGCGTACATCATATCTTTGGGTGAGGCAAGTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AFYWCICLIEHISPA*SEAYIISLGEASSG Trigger: TCCTGAACTTGCCTCACCCAAAGATATGATGTACGCTTCAGACAATGCTGGACTGATGTGTTCAATTAAACAAATGCACCAATAAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456505.1 ENST00000668958.1 |
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| CDS GCA 72 bp | CAGGTCTCTGGTTGTAACCTTTTGAAAGGTTCTTCCTaGATGCTTTATTCTTCATTGAGAGCATGTAGAATC | + |
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Preference number: 6 (lower is better) Translates to: QVSGCNLLKGSS*MLYSSLRACRI Trigger: GATTCTACATGCTCTCAATGAAGAATAAAGCATGCAGGAAGAACCTTTCAAAAGGTTACAACCAGAGACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000323355.3 ENST00000454647.1 ENST00000657385.1 ENST00000657912.1 ENST00000658718.1 ENST00000662600.1 ENST00000663021.1 ENST00000666468.1 ENST00000669361.1 ENST00000669878.1 ENST00000671534.1 |
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