Pregenerated sensors for LINC00304 (Homo sapiens)
Ensembl gene IDs: ENSG00000180422Ensembl transcript IDs: ENST00000321214.2, ENST00000562248.1, ENST00000565008.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGGAGTGCCCGGAGCCAGCAGGGCGGCCACCGAAACCCCGCACTaGCGCAGGGACCGAGGCACCCGGGGCCAGTTTCCGGGAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: EGVPGASRAATETPH*RRDRGTRGQFPGEP Trigger: GGGCTCTCCCGGAAACTGGCCCCGGGTGCCTCGGTCCCTGCGTCAGTGCGGGGTTTCGGTGGCCGCCCTGCTGGCTCCGGGCACTCCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 90 bp | CCTGGGCCTGGCTTCACGCCCCCAGCTCTTGCCGGGTATGACGGGTaGGCATGGAGGGTGACTCAGCCCAGCCCAGGAAGGACCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: PGPGFTPPALAGYDG*AWRVTQPSPGRTSR Trigger: GCGGCTGGTCCTTCCTGGGCTGGGCTGAGTCACCCTCCATGCCCACCCGTCATACCCGGCAAGAGCTGGGGGCGTGAAGCCAGGCCCAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS GCA 90 bp | CCGCCATGGCCTCCCTCTTCCACTCAGCAGGACGGAGGTACCCTGTaGCCTCGCGGGTCACCCAGGGCAGCCTCCCTGTTGAGGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PPWPPSSTQQDGGTL*PRGSPRAASLLREL Trigger: CAGCTCCCTCAACAGGGAGGCTGCCCTGGGTGACCCGCGAGGGCACAGGGTACCTCCGTCCTGCTGAGTGGAAGAGGGAGGCCATGGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 90 bp | CCTGGCTTCACGCCCCCAGCTCTTGCCGGGTATGACGGGTGGGCATaGAGGGTGACTCAGCCCAGCCCAGGAAGGACCAGCCGCGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PGFTPPALAGYDGWA*RVTQPSPGRTSRVA Trigger: TGCCACGCGGCTGGTCCTTCCTGGGCTGGGCTGAGTCACCCTCCATGCCCACCCGTCATACCCGGCAAGAGCTGGGGGCGTGAAGCCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS TCA 90 bp | CCAGGGGACACCCTCCTTGAGACTCCCAGGGTGATGCTCAGCTCCTaGGGACCGAGCGGCCTCTGCATGGCGCTCCGTCCCCATCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PGDTLLETPRVMLSS*GPSGLCMALRPHPS Trigger: GGAGGGATGGGGACGGAGCGCCATGCAGAGGCCGCTCGGTCCTCAGGAGCTGAGCATCACCCTGGGAGTCTCAAGGAGGGTGTCCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS CCA 90 bp | AAGCCAGTAGTGGCAGGCCAGTCCCCCTCACGCCCGCCTCCGCCATaGCCTCCCTCTTCCACTCAGCAGGACGGAGGTACCCTGTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: KPVVAGQSPSRPPPP*PPSSTQQDGGTLCP Trigger: AGGGCACAGGGTACCTCCGTCCTGCTGAGTGGAAGAGGGAGGCCATGGCGGAGGCGGGCGTGAGGGGGACTGGCCTGCCACTACTGGCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 90 bp | CTGCATGGACTCTGCCCGCCAATTAGGAAGCGTCGGTCCCAGGCCTaGGCTCACCTCCCCAAGCTCAGCCTGGGGCCAGCTCTGCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: LHGLCPPIRKRRSQA*AHLPKLSLGPALPA Trigger: AGCCGGCAGAGCTGGCCCCAGGCTGAGCTTGGGGAGGTGAGCCCAGGCCTGGGACCGACGCTTCCTAATTGGCGGGCAGAGTCCATGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS TCA 90 bp | TCTTCGGGGCCGTCATTCTGCCACCCACAGATGGGAGCCTCCTCATaGGGCGTCCGGCCTCAGTGGCAGCTGGAGAGCCACAGGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSGPSFCHPQMGASS*GVRPQWQLESHRGC Trigger: ACAGCCCCTGTGGCTCTCCAGCTGCCACTGAGGCCGGACGCCTCATGAGGAGGCTCCCATCTGTGGGTGGCAGAATGACGGCCCCGAAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000321214.2 ENST00000562248.1 |
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| CDS TCA 90 bp | ATTTTCCTGTGTCACCGAGGAGGACGTGGGCTCCGAGCCGCTGAGTaGCCTGTTGGGGGCAGGGCTGGCGCTGGCCGTCCCAGCTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: IFLCHRGGRGLRAAE*PVGGRAGAGRPSLR Trigger: CCTTAAGCTGGGACGGCCAGCGCCAGCCCTGCCCCCAACAGGTCACTCAGCGGCTCGGAGCCCACGTCCTCCTCGGTGACACAGGAAAAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS TCA 90 bp | GAGCTGGGGATCTCCATCCAGCAAGACTGCGAACCAGGCCACCTCTaGGACCGGCTGCCACAGACCACATGCTGGCCCTGGCTGCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: ELGISIQQDCEPGHL*DRLPQTTCWPWLPA Trigger: AGCGGGCAGCCAGGGCCAGCATGTGGTCTGTGGCAGCCGGTCTCAGAGGTGGCCTGGTTCGCAGTCTTGCTGGATGGAGATCCCCAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS TCA 90 bp | GGCGACTCAGCGGCTCACAGCCTTCTCAGTTCAGTTCCTATCAGCTaGCCGAGGCGGCCCCACCCCACCTGCCCTTGCCCTAGGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GDSAAHSLLSSVPIS*PRRPHPTCPCPRSW Trigger: CCAGCTCCTAGGGCAAGGGCAGGTGGGGTGGGGCCGCCTCGGTCAGCTGATAGGAACTGAACTGAGAAGGCTGTGAGCCGCTGAGTCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS GCA 90 bp | GCCTCTGCATGGCGCTCCGTCCCCATCCCTCCGCCTCTCCAGATCTaGCTGGCTCAACGCACAATCATCCTGGGCCCTCCCAGCCTTACC | + |
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Preference number: 5 (lower is better) Translates to: ASAWRSVPIPPPLQI*LAQRTIILGPPSLT Trigger: GGTAAGGCTGGGAGGGCCCAGGATGATTGTGCGTTGAGCCAGGCAGATCTGGAGAGGCGGAGGGATGGGGACGGAGCGCCATGCAGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS GCA 90 bp | GGACACGTGGGCTTCCGTGTAGACTGGGAGGGGCTGCATGGACTCTaGCCGCCAATTAGGAAGCGTCGGTCCCAGGCCTGGGCTCACCTC | + |
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Preference number: 5 (lower is better) Translates to: GHVGFRVDWEGLHGL*PPIRKRRSQAWAHL Trigger: GAGGTGAGCCCAGGCCTGGGACCGACGCTTCCTAATTGGCGGGCAGAGTCCATGCAGCCCCTCCCAGTCTACACGGAAGCCCACGTGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS CCA 90 bp | CTGCATGGCGCTCCGTCCCCATCCCTCCGCCTCTCCAGATCTGCCTaGCTCAACGCACAATCATCCTGGGCCCTCCCAGCCTTACCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LHGAPSPSLRLSRSA*LNAQSSWALPALPG Trigger: GCCAGGTAAGGCTGGGAGGGCCCAGGATGATTGTGCGTTGAGCCAGGCAGATCTGGAGAGGCGGAGGGATGGGGACGGAGCGCCATGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS CCA 90 bp | TCCCTCCGCCTCTCCAGATCTGCCTGGCTCAACGCACAATCATCCTaGGCCCTCCCAGCCTTACCTGGCCAAACCGTGGCCTTGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: SLRLSRSAWLNAQSS*ALPALPGQTVALPT Trigger: GGTGGGCAAGGCCACGGTTTGGCCAGGTAAGGCTGGGAGGGCCCAGGATGATTGTGCGTTGAGCCAGGCAGATCTGGAGAGGCGGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS GCA 90 bp | CCTGTTGGGGGCAGGGCTGGCGCTGGCCGTCCCAGCTTAAGGACTTaGCACAGCTTAAGACCCATGGAAGGAAGGTACGGGGAGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PVGGRAGAGRPSLRT*HSLRPMEGRYGEVL Trigger: CAGCACCTCCCCGTACCTTCCTTCCATGGGTCTTAAGCTGTGGCAAGTCCTTAAGCTGGGACGGCCAGCGCCAGCCCTGCCCCCAACAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS GCA 90 bp | TGGGCCCTCCCAGCCTTACCTGGCCAAACCGTGGCCTTGCCCACCTaGCTGGACCATTCCCTCCTGATTGGGTGCGATCTGCAGACAGCA | + |
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Preference number: 5 (lower is better) Translates to: WALPALPGQTVALPT*LDHSLLIGCDLQTA Trigger: TGCTGTCTGCAGATCGCACCCAATCAGGAGGGAATGGTCCAGGCAGGTGGGCAAGGCCACGGTTTGGCCAGGTAAGGCTGGGAGGGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS TCA 90 bp | CAGCCGCACCTGGGGCCCGGGGCAGCCGCACCTGGAGGGTGGCTCTaGGGCCAGATCTGTGTTGTTTATGGACACTTATGTGTCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: QPHLGPGAAAPGGWL*GQICVVYGHLCVCV Trigger: CACACAGACACATAAGTGTCCATAAACAACACAGATCTGGCCTCAGAGCCACCCTCCAGGTGCGGCTGCCCCGGGCCCCAGGTGCGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS GCA 90 bp | TCTGGAATGTGCCTTCCACGGGACCCTCTCATGCCCTTGCACAACTaGACCATTTTCCTGTGTCACCGAGGAGGACGTGGGCTCCGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SGMCLPRDPLMPLHN*TIFLCHRGGRGLRA Trigger: GGCTCGGAGCCCACGTCCTCCTCGGTGACACAGGAAAATGGTGCAGTTGTGCAAGGGCATGAGAGGGTCCCGTGGAAGGCACATTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 90 bp | GCAGCCGACTGTAGCTTTGCTCTTGGACGGGGAACATCCACTGGCTaGGGTCAGTGCACACCGCACAGAGTGACCTTCCACCGGACAGAA | + |
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Preference number: 5 (lower is better) Translates to: AADCSFALGRGTSTG*GQCTPHRVTFHRTE Trigger: TTCTGTCCGGTGGAAGGTCACTCTGTGCGGTGTGCACTGACCCCAGCCAGTGGATGTTCCCCGTCCAAGAGCAAAGCTACAGTCGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 90 bp | CTCACATCCCATTCCACCAACACCAAGGTTCCTTCTGGAGGCTCCTaGGAGAATCCATTTTCCGCCTCTTCCGGCTTCGGGAGGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LTSHSTNTKVPSGGS*ENPFSASSGFGRPL Trigger: GAGAGGCCTCCCGAAGCCGGAAGAGGCGGAAAATGGATTCTCCCAGGAGCCTCCAGAAGGAACCTTGGTGTTGGTGGAATGGGATGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS GCA 90 bp | AAAGCCCACAGGAGCCGAAACGTCCCTCACAGAGGAGCTGAGCTCTaGGGGCCACATGTGCCAGCACTGAAACCTAAATCCATGACATCA | + |
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Preference number: 5 (lower is better) Translates to: KAHRSRNVPHRGAEL*GPHVPALKPKSMTS Trigger: TGATGTCATGGATTTAGGTTTCAGTGCTGGCACATGTGGCCCGCAGAGCTCAGCTCCTCTGTGAGGGACGTTTCGGCTCCTGTGGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS CCA 90 bp | CACATTAGTAAATTTCACTGTCCTGGGGACAGCAGAAGCAGGAGGTaGACACGTGGGCTTCCGTGTAGACTGGGAGGGGCTGCATGGACT | + |
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Preference number: 5 (lower is better) Translates to: HISKFHCPGDSRSRR*TRGLPCRLGGAAWT Trigger: AGTCCATGCAGCCCCTCCCAGTCTACACGGAAGCCCACGTGTCCACCTCCTGCTTCTGCTGTCCCCAGGACAGTGAAATTTACTAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS CCA 90 bp | GGTGCAGTCACGGATGTTTATCCTCCAGTGACCTCGTCTCTCTTGTaGCTGCTGAGGAGATGCACATGGGGCGTGATCATTCGTATTGAT | + |
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Preference number: 5 (lower is better) Translates to: GAVTDVYPPVTSSLL*LLRRCTWGVIIRID Trigger: ATCAATACGAATGATCACGCCCCATGTGCATCTCCTCAGCAGCCACAAGAGAGACGAGGTCACTGGAGGATAAACATCCGTGACTGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS CCA 90 bp | CCTCCAGTGACCTCGTCTCTCTTGTGGCTGCTGAGGAGATGCACATaGGGCGTGATCATTCGTATTGATCAATTTGCTGCTCATTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PPVTSSLLWLLRRCT*GVIIRIDQFAAHLP Trigger: TGGCAAATGAGCAGCAAATTGATCAATACGAATGATCACGCCCCATGTGCATCTCCTCAGCAGCCACAAGAGAGACGAGGTCACTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS GCA 90 bp | GTTTATCCTCCAGTGACCTCGTCTCTCTTGTGGCTGCTGAGGAGATaGACATGGGGCGTGATCATTCGTATTGATCAATTTGCTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: VYPPVTSSLLWLLRR*TWGVIIRIDQFAAH Trigger: ATGAGCAGCAAATTGATCAATACGAATGATCACGCCCCATGTGCATCTCCTCAGCAGCCACAAGAGAGACGAGGTCACTGGAGGATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS TCA 72 bp | CCCGGAGCCAGCAGGGCGGCCACCGAAACCCCGCACTaGCGCAGGGACCGAGGCACCCGGGGCCAGTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: PGASRAATETPH*RRDRGTRGQFP Trigger: CGGAAACTGGCCCCGGGTGCCTCGGTCCCTGCGTCAGTGCGGGGTTTCGGTGGCCGCCCTGCTGGCTCCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 72 bp | GGTCCCAGGCCTGGGCTCACCTCCCCAAGCTCAGCCTaGGGCCAGCTCTGCCGGCTCCTGAAGGGCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GPRPGLTSPSSA*GQLCRLLKGLE Trigger: CTCAAGGCCCTTCAGGAGCCGGCAGAGCTGGCCCCAGGCTGAGCTTGGGGAGGTGAGCCCAGGCCTGGGACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS GCA 72 bp | CCTCCCTCTTCCACTCAGCAGGACGGAGGTACCCTGTaGCCTCGCGGGTCACCCAGGGCAGCCTCCCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PPSSTQQDGGTL*PRGSPRAASLL Trigger: CAACAGGGAGGCTGCCCTGGGTGACCCGCGAGGGCACAGGGTACCTCCGTCCTGCTGAGTGGAAGAGGGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 72 bp | GGGGGTCTTCGGGGCCGTCATTCTGCCACCCACAGATaGGAGCCTCCTCATGAGGCGTCCGGCCTCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GGLRGRHSATHR*EPPHEASGLSG Trigger: GCCACTGAGGCCGGACGCCTCATGAGGAGGCTCCCATCTGTGGGTGGCAGAATGACGGCCCCGAAGACCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321214.2 ENST00000562248.1 |
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| CDS CCA 72 bp | CTCTGCCCGCCAATTAGGAAGCGTCGGTCCCAGGCCTaGGCTCACCTCCCCAAGCTCAGCCTGGGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LCPPIRKRRSQA*AHLPKLSLGPA Trigger: AGCTGGCCCCAGGCTGAGCTTGGGGAGGTGAGCCCAGGCCTGGGACCGACGCTTCCTAATTGGCGGGCAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS TCA 72 bp | ACCCTCCTTGAGACTCCCAGGGTGATGCTCAGCTCCTaGGGACCGAGCGGCCTCTGCATGGCGCTCCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: TLLETPRVMLSS*GPSGLCMALRP Trigger: GGGACGGAGCGCCATGCAGAGGCCGCTCGGTCCTCAGGAGCTGAGCATCACCCTGGGAGTCTCAAGGAGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS GCA 72 bp | GAGACCGGCTGCCACAGACCACATGCTGGCCCTGGCTaGCCGCTAAGGCCAGGGGACACCCTCCTTGAGACT | + |
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Preference number: 6 (lower is better) Translates to: ETGCHRPHAGPG*PLRPGDTLLET Trigger: AGTCTCAAGGAGGGTGTCCCCTGGCCTTAGCGGGCAGCCAGGGCCAGCATGTGGTCTGTGGCAGCCGGTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS CCA 72 bp | GCTCCGTCCCCATCCCTCCGCCTCTCCAGATCTGCCTaGCTCAACGCACAATCATCCTGGGCCCTCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: APSPSLRLSRSA*LNAQSSWALPA Trigger: GGCTGGGAGGGCCCAGGATGATTGTGCGTTGAGCCAGGCAGATCTGGAGAGGCGGAGGGATGGGGACGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS TCA 72 bp | CCGTCATTCTGCCACCCACAGATGGGAGCCTCCTCATaGGGCGTCCGGCCTCAGTGGCAGCTGGAGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PSFCHPQMGASS*GVRPQWQLESH Trigger: GTGGCTCTCCAGCTGCCACTGAGGCCGGACGCCTCATGAGGAGGCTCCCATCTGTGGGTGGCAGAATGACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000321214.2 ENST00000562248.1 |
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| CDS TCA 72 bp | CCGTGTGAGCGGGCTTCCTGCTCAGAGAGAGGCAGATaGGCCCCACGTTGCTACCGCGGTCGTCCATCCCGT | + |
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Preference number: 6 (lower is better) Translates to: PCERASCSERGR*APRCYRGRPSR Trigger: ACGGGATGGACGACCGCGGTAGCAACGTGGGGCTCATCTGCCTCTCTCTGAGCAGGAAGCCCGCTCACACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS GCA 72 bp | AGCAAGACTGCGAACCAGGCCACCTCTGAGACCGGCTaGCACAGACCACATGCTGGCCCTGGCTGCCCGCTA | + |
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Preference number: 6 (lower is better) Translates to: SKTANQATSETG*HRPHAGPGCPL Trigger: TAGCGGGCAGCCAGGGCCAGCATGTGGTCTGTGGCAGCCGGTCTCAGAGGTGGCCTGGTTCGCAGTCTTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS GCA 72 bp | GGCTTCCGTGTAGACTGGGAGGGGCTGCATGGACTCTaGCCGCCAATTAGGAAGCGTCGGTCCCAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GFRVDWEGLHGL*PPIRKRRSQAW Trigger: CCAGGCCTGGGACCGACGCTTCCTAATTGGCGGGCAGAGTCCATGCAGCCCCTCCCAGTCTACACGGAAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS TCA 72 bp | ATGTGCCGTCCACAGTCGCAGGTCCCCGCTGCTGTGTaGACTCACAGGTCCCAGGGTGAGGAAGCGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: MCRPQSQVPAAV*THRSQGEEAGS Trigger: AGACCCCGCTTCCTCACCCTGGGACCTGTGAGTTCACACAGCAGCGGGGACCTGCGACTGTGGACGGCACAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000321214.2 ENST00000562248.1 |
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| CDS CAA 90 bp | ACCTGTTGGGGGCAGGGCTGGCGCTGGCCGTCCCAGCTTAAGGACTaGCCACAGCTTAAGACCCATGGAAGGAAGGTACGGGGAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TCWGQGWRWPSQLKD*PQLKTHGRKVRGGA Trigger: AGCACCTCCCCGTACCTTCCTTCCATGGGTCTTAAGCTGTGGCAAGTCCTTAAGCTGGGACGGCCAGCGCCAGCCCTGCCCCCAACAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS TCA 72 bp | ATCTCCATCCAGCAAGACTGCGAACCAGGCCACCTCTaGGACCGGCTGCCACAGACCACATGCTGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ISIQQDCEPGHL*DRLPQTTCWPW Trigger: CCAGGGCCAGCATGTGGTCTGTGGCAGCCGGTCTCAGAGGTGGCCTGGTTCGCAGTCTTGCTGGATGGAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS TCA 72 bp | AGCCCACAGGAGCCGAAACGTCCCTCACAGAGGAGCTaGGCTCTGCGGGCCACATGTGCCAGCACTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: SPQEPKRPSQRS*ALRATCASTET Trigger: GGTTTCAGTGCTGGCACATGTGGCCCGCAGAGCTCAGCTCCTCTGTGAGGGACGTTTCGGCTCCTGTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS GCA 72 bp | GGCAGGGCTGGCGCTGGCCGTCCCAGCTTAAGGACTTaGCACAGCTTAAGACCCATGGAAGGAAGGTACGGG | + |
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Preference number: 6 (lower is better) Translates to: GRAGAGRPSLRT*HSLRPMEGRYG Trigger: CCCGTACCTTCCTTCCATGGGTCTTAAGCTGTGGCAAGTCCTTAAGCTGGGACGGCCAGCGCCAGCCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS GCA 72 bp | CCAGCCTTACCTGGCCAAACCGTGGCCTTGCCCACCTaGCTGGACCATTCCCTCCTGATTGGGTGCGATCTG | + |
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Preference number: 6 (lower is better) Translates to: PALPGQTVALPT*LDHSLLIGCDL Trigger: CAGATCGCACCCAATCAGGAGGGAATGGTCCAGGCAGGTGGGCAAGGCCACGGTTTGGCCAGGTAAGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS CCA 72 bp | CTCTCCAGATCTGCCTGGCTCAACGCACAATCATCCTaGGCCCTCCCAGCCTTACCTGGCCAAACCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSRSAWLNAQSS*ALPALPGQTVA Trigger: GGCCACGGTTTGGCCAGGTAAGGCTGGGAGGGCCCAGGATGATTGTGCGTTGAGCCAGGCAGATCTGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS CAA 72 bp | GGGCAGGGCTGGCGCTGGCCGTCCCAGCTTAAGGACTaGCCACAGCTTAAGACCCATGGAAGGAAGGTACGG | + |
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Preference number: 6 (lower is better) Translates to: GQGWRWPSQLKD*PQLKTHGRKVR Trigger: CCGTACCTTCCTTCCATGGGTCTTAAGCTGTGGCAAGTCCTTAAGCTGGGACGGCCAGCGCCAGCCCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS TCA 72 bp | ACTGGCTGGGGTCAGTGCACACCGCACAGAGTGACCTaGGGACAACCAAGTGAGGCAGAGTCAGCATGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGWGQCTPHRVT*GQPSEAESAWG Trigger: CCCCCATGCTGACTCTGCCTCACTTGGTTGTCCTCAGGTCACTCTGTGCGGTGTGCACTGACCCCAGCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS GCA 72 bp | GCTCTTGGACGGGGAACATCCACTGGCTGGGGTCAGTaGACACCGCACAGAGTGACCTTCCACCGGACAGAA | + |
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Preference number: 6 (lower is better) Translates to: ALGRGTSTGWGQ*TPHRVTFHRTE Trigger: TTCTGTCCGGTGGAAGGTCACTCTGTGCGGTGTGCACTGACCCCAGCCAGTGGATGTTCCCCGTCCAAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS GCA 72 bp | TGCCTTCCACGGGACCCTCTCATGCCCTTGCACAACTaGACCATTTTCCTGTGTCACCGAGGAGGACGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CLPRDPLMPLHN*TIFLCHRGGRG Trigger: CCCACGTCCTCCTCGGTGACACAGGAAAATGGTGCAGTTGTGCAAGGGCATGAGAGGGTCCCGTGGAAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS GCA 72 bp | AGGAGCCGAAACGTCCCTCACAGAGGAGCTGAGCTCTaGGGGCCACATGTGCCAGCACTGAAACCTAAATCC | + |
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Preference number: 6 (lower is better) Translates to: RSRNVPHRGAEL*GPHVPALKPKS Trigger: GGATTTAGGTTTCAGTGCTGGCACATGTGGCCCGCAGAGCTCAGCTCCTCTGTGAGGGACGTTTCGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS CCA 72 bp | AAATTTCACTGTCCTGGGGACAGCAGAAGCAGGAGGTaGACACGTGGGCTTCCGTGTAGACTGGGAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: KFHCPGDSRSRR*TRGLPCRLGGA Trigger: AGCCCCTCCCAGTCTACACGGAAGCCCACGTGTCCACCTCCTGCTTCTGCTGTCCCCAGGACAGTGAAATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS GCA 72 bp | CTGGAATGTGCCTTCCACGGGACCCTCTCATGCCCTTaGACAACTGCACCATTTTCCTGTGTCACCGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LECAFHGTLSCP*TTAPFSCVTEE Trigger: CTCCTCGGTGACACAGGAAAATGGTGCAGTTGTGCAAGGGCATGAGAGGGTCCCGTGGAAGGCACATTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 72 bp | CATTCCACCAACACCAAGGTTCCTTCTGGAGGCTCCTaGGAGAATCCATTTTCCGCCTCTTCCGGCTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: HSTNTKVPSGGS*ENPFSASSGFG Trigger: CCCGAAGCCGGAAGAGGCGGAAAATGGATTCTCCCAGGAGCCTCCAGAAGGAACCTTGGTGTTGGTGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 72 bp | AGACTCCATGAACCTGGGCGGGGAAGTGCACGGGGTTaGTTGGCCGTAATCTTCTCTCTTCCGTCCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: RLHEPGRGSARG*LAVIFSLPSSM Trigger: CATTGAGGACGGAAGAGAGAAGATTACGGCCAACCAACCCCGTGCACTTCCCCGCCCAGGTTCATGGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS CAA 72 bp | TCTGGAATGTGCCTTCCACGGGACCCTCTCATGCCCTaGCACAACTGCACCATTTTCCTGTGTCACCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGMCLPRDPLMP*HNCTIFLCHRG Trigger: TCCTCGGTGACACAGGAAAATGGTGCAGTTGTGCAAGGGCATGAGAGGGTCCCGTGGAAGGCACATTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CAA 72 bp | GTCACGGATGTTTATCCTCCAGTGACCTCGTCTCTCTaGTGGCTGCTGAGGAGATGCACATGGGGCGTGATC | + |
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Preference number: 6 (lower is better) Translates to: VTDVYPPVTSSL*WLLRRCTWGVI Trigger: GATCACGCCCCATGTGCATCTCCTCAGCAGCCACAAGAGAGACGAGGTCACTGGAGGATAAACATCCGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS CAA 72 bp | CCGCACCTGGAGGGTGGCTCTGAGGCCAGATCTGTGTaGTTTATGGACACTTATGTGTCTGTGTGTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PHLEGGSEARSV*FMDTYVSVCAV Trigger: CACAGCACACACAGACACATAAGTGTCCATAAACAACACAGATCTGGCCTCAGAGCCACCCTCCAGGTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565008.1 |
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| CDS CCA 72 bp | TCTCACATCCCATTCCACCAACACCAAGGTTCCTTCTaGAGGCTCCTGGGAGAATCCATTTTCCGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SHIPFHQHQGSF*RLLGESIFRLF Trigger: GAAGAGGCGGAAAATGGATTCTCCCAGGAGCCTCCAGAAGGAACCTTGGTGTTGGTGGAATGGGATGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321214.2 |
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| CDS CCA 72 bp | ACGGATGTTTATCCTCCAGTGACCTCGTCTCTCTTGTaGCTGCTGAGGAGATGCACATGGGGCGTGATCATT | + |
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Preference number: 6 (lower is better) Translates to: TDVYPPVTSSLL*LLRRCTWGVII Trigger: AATGATCACGCCCCATGTGCATCTCCTCAGCAGCCACAAGAGAGACGAGGTCACTGGAGGATAAACATCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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| CDS CCA 72 bp | ACCTCGTCTCTCTTGTGGCTGCTGAGGAGATGCACATaGGGCGTGATCATTCGTATTGATCAATTTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TSSLLWLLRRCT*GVIIRIDQFAA Trigger: AGCAGCAAATTGATCAATACGAATGATCACGCCCCATGTGCATCTCCTCAGCAGCCACAAGAGAGACGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562248.1 |
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