Pregenerated sensors for LINC00303 (Homo sapiens)
Ensembl gene IDs: ENSG00000176754Ensembl transcript IDs: ENST00000367207.7, ENST00000418245.5, ENST00000427799.1, ENST00000656706.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACTCACAAGCCCGCGCGATGGGAGTCAGGGGAGGCAACGTTGTCTaGCCTCCTCTCCTCCCACAGCATGCAGGAGGCCAGCGGTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: DSQARAMGVRGGNVV*PPLLPQHAGGQRWR Trigger: CCGCCACCGCTGGCCTCCTGCATGCTGTGGGAGGAGAGGAGGGCAGACAACGTTGCCTCCCCTGACTCCCATCGCGCGGGCTTGTGAGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS GCA 90 bp | GTGTTTGAAGCCCGCGCGATGGGAGTCAGGGGAGGCAACGTTGTCTaGCCTCCTCTCCTCCCACAGCATGCAGGAGGCCAGCGGTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VFEARAMGVRGGNVV*PPLLPQHAGGQRWR Trigger: CCGCCACCGCTGGCCTCCTGCATGCTGTGGGAGGAGAGGAGGGCAGACAACGTTGCCTCCCCTGACTCCCATCGCGCGGGCTTCAAACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427799.1 |
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| CDS CCA 90 bp | AGTTCCCTGGACAACTGCGCTCCATGGACTCACAAGCCCGCGCGATaGGAGTCAGGGGAGGCAACGTTGTCTGCCCTCCTCTCCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SSLDNCAPWTHKPAR*ESGEATLSALLSSH Trigger: GTGGGAGGAGAGGAGGGCAGACAACGTTGCCTCCCCTGACTCCCATCGCGCGGGCTTGTGAGTCCATGGAGCGCAGTTGTCCAGGGAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS GCA 90 bp | GCATCACCTTCCTCTCATGCTGCATCGGATAGTTCCCTGGACAACTaGGCTCCATGGACTCACAAGCCCGCGCGATGGGAGTCAGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: ASPSSHAASDSSLDN*APWTHKPARWESGE Trigger: CTCCCCTGACTCCCATCGCGCGGGCTTGTGAGTCCATGGAGCGCAGTTGTCCAGGGAACTATCCGATGCAGCATGAGAGGAAGGTGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CCA 90 bp | TCCTCTCATGCTGCATCGGATAGTTCCCTGGACAACTGCGCTCCATaGACTCACAAGCCCGCGCGATGGGAGTCAGGGGAGGCAACGTTG | + |
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Preference number: 5 (lower is better) Translates to: SSHAASDSSLDNCAP*THKPARWESGEATL Trigger: CAACGTTGCCTCCCCTGACTCCCATCGCGCGGGCTTGTGAGTCCATGGAGCGCAGTTGTCCAGGGAACTATCCGATGCAGCATGAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CCA 90 bp | CATCCCAGATTGTCCTCTGGAGGCACGTGTGCCTTGAGCCACGGCTaGGGCTCACTCCCAGGACAACGGTACAGCTGCTGTAGAGGCATA | + |
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Preference number: 5 (lower is better) Translates to: HPRLSSGGTCALSHG*GSLPGQRYSCCRGI Trigger: TATGCCTCTACAGCAGCTGTACCGTTGTCCTGGGAGTGAGCCCCAGCCGTGGCTCAAGGCACACGTGCCTCCAGAGGACAATCTGGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CCA 90 bp | ATGCCGCTGCATCACCTTCCTCTCATGCTGCATCGGATAGTTCCCTaGACAACTGCGCTCCATGGACTCACAAGCCCGCGCGATGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: MPLHHLPLMLHRIVP*TTALHGLTSPRDGS Trigger: ACTCCCATCGCGCGGGCTTGTGAGTCCATGGAGCGCAGTTGTCCAGGGAACTATCCGATGCAGCATGAGAGGAAGGTGATGCAGCGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS TCA 90 bp | GCTGGTGGCCTCCTTACATTGTCCACTGGGGCTGGCAATGACTGTTaGAGTGTCTCTGCCCTGCCAGGTGTTGAAAGGCTGCGTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: AGGLLTLSTGAGNDC*SVSALPGVERLRLL Trigger: AAGGAGACGCAGCCTTTCAACACCTGGCAGGGCAGAGACACTTCAACAGTCATTGCCAGCCCCAGTGGACAATGTAAGGAGGCCACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS GCA 90 bp | CTGGGGTTGGCCTGTACCTACACGATGTTCTCCTTCTCAGGGCCTTaGCCCTGCTGGCTGAGGAAGGGATGGGATTTATTCTGCATTCCC | + |
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Preference number: 5 (lower is better) Translates to: LGLACTYTMFSFSGP*PCWLRKGWDLFCIP Trigger: GGGAATGCAGAATAAATCCCATCCCTTCCTCAGCCAGCAGGGGCAAGGCCCTGAGAAGGAGAACATCGTGTAGGTACAGGCCAACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS CCA 90 bp | AATAGAGAGGTGAGTGATGATGAGGAGGGCCCTGTGAGAGGCCCCTaGGGTTGGCCTGTACCTACACGATGTTCTCCTTCTCAGGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: NREVSDDEEGPVRGP*GWPVPTRCSPSQGL Trigger: AAGGCCCTGAGAAGGAGAACATCGTGTAGGTACAGGCCAACCCCAGGGGCCTCTCACAGGGCCCTCCTCATCATCACTCACCTCTCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS GCA 90 bp | GAAACAGTCTCGGGGCGGGGGTATGGGCAAAGGAGTGACCTCAGCTaGCAATCACTGGAAGCCCAGAACAGCTTTCTCTCATCTCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: ETVSGRGYGQRSDLS*QSLEAQNSFLSSQG Trigger: ACCTTGAGATGAGAGAAAGCTGTTCTGGGCTTCCAGTGATTGGCAGCTGAGGTCACTCCTTTGCCCATACCCCCGCCCCGAGACTGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS GCA 90 bp | CTCTGCTTGGGTGCCACTGTTAGGCTTTCCCCAGATGAAGGGCCCTaGACTGTTCATTTTGTGCAGGATAAATCCAGGCCCTGGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LCLGATVRLSPDEGP*TVHFVQDKSRPWAE Trigger: CTCAGCCCAGGGCCTGGATTTATCCTGCACAAAATGAACAGTGCAGGGCCCTTCATCTGGGGAAAGCCTAACAGTGGCACCCAAGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS GCA 90 bp | GTCTCTGCCCTGCCAGGTGTTGAAAGGCTGCGTCTCCTTCACTGTTaGATCCCTAGGGTCCATGGTTGTCTCACTGAGTGTTTGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: VSALPGVERLRLLHC*IPRVHGCLTECLKP Trigger: GGGCTTCAAACACTCAGTGAGACAACCATGGACCCTAGGGATGCAACAGTGAAGGAGACGCAGCCTTTCAACACCTGGCAGGGCAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427799.1 |
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| CDS GCA 90 bp | CATTGTCCACTGGGGCTGGCAATGACTGTTGAAGTGTCTCTGCCCTaGCAGGTGTTGAAAGGCTGCGTCTCCTTCACTGTTGCATCCCTA | + |
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Preference number: 5 (lower is better) Translates to: HCPLGLAMTVEVSLP*QVLKGCVSFTVASL Trigger: TAGGGATGCAACAGTGAAGGAGACGCAGCCTTTCAACACCTGGCAGGGCAGAGACACTTCAACAGTCATTGCCAGCCCCAGTGGACAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS GCA 90 bp | GTCTCTGCCCTGCCAGGTGTTGAAAGGCTGCGTCTCCTTCACTGTTaGATCCCTAGGGTCCATGGTTGTCTCACTGAGTGTTTGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: VSALPGVERLRLLHC*IPRVHGCLTECLLN Trigger: ATTCAGCAAACACTCAGTGAGACAACCATGGACCCTAGGGATGCAACAGTGAAGGAGACGCAGCCTTTCAACACCTGGCAGGGCAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS GCA 90 bp | GCAATGACTGTTGAAGTGTCTCTGCCCTGCCAGGTGTTGAAAGGCTaGGTCTCCTTCACTGTTGCATCCCTAGGGTCCATGGTTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: AMTVEVSLPCQVLKG*VSFTVASLGSMVVS Trigger: TGAGACAACCATGGACCCTAGGGATGCAACAGTGAAGGAGACGCAGCCTTTCAACACCTGGCAGGGCAGAGACACTTCAACAGTCATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS CCA 90 bp | CTGCCAATCACTGGAAGCCCAGAACAGCTTTCTCTCATCTCAAGGTaGGATGCCGCTGCATCACCTTCCTCTCATGCTGCATCGGATAGT | + |
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Preference number: 5 (lower is better) Translates to: LPITGSPEQLSLISR*DAAASPSSHAASDS Trigger: ACTATCCGATGCAGCATGAGAGGAAGGTGATGCAGCGGCATCCCACCTTGAGATGAGAGAAAGCTGTTCTGGGCTTCCAGTGATTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CCA 90 bp | TCCATTTCATTGCCTTTCCAGCTTCCAGGCACTGACAGCATTTCTTaGCTGGTGGCCTCCTTACATTGTCCACTGGGGCTGGCAATGACT | + |
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Preference number: 5 (lower is better) Translates to: SISLPFQLPGTDSIS*LVASLHCPLGLAMT Trigger: AGTCATTGCCAGCCCCAGTGGACAATGTAAGGAGGCCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS TCA 90 bp | GTTCTGGGGAAAATCCATTTCATTGCCTTTCCAGCTTCCAGGCACTaGCAGCATTTCTTGGCTGGTGGCCTCCTTACATTGTCCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: VLGKIHFIAFPASRH*QHFLAGGLLTLSTG Trigger: CCCAGTGGACAATGTAAGGAGGCCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGATTTTCCCCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS GCA 90 bp | CTGTGCCATATTCTCCCTGGAGGTTCTGGGGAAAATCCATTTCATTaGCTTTCCAGCTTCCAGGCACTGACAGCATTTCTTGGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LCHILPGGSGENPFH*LSSFQALTAFLGWW Trigger: CCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGATTTTCCCCAGAACCTCCAGGGAGAATATGGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS GCA 90 bp | CTGTTAGGCTTTCCCCAGATGAAGGGCCCTGCACTGTTCATTTTGTaGAGGATAAATCCAGGCCCTGGGCTGAGTGCCAAACAAGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LLGFPQMKGPALFIL*RINPGPGLSAKQVK Trigger: TTTCACTTGTTTGGCACTCAGCCCAGGGCCTGGATTTATCCTGCACAAAATGAACAGTGCAGGGCCCTTCATCTGGGGAAAGCCTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS TCA 90 bp | GTTCTGGGGAAAATCCATTTCATTGCCTTTCCAGCTTCCAGGCACTaGCAGCATTTCTTGGCTGGTGGCCTCCTTACATTTCTGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: VLGKIHFIAFPASRH*QHFLAGGLLTFLLC Trigger: GCACAGCAGAAATGTAAGGAGGCCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGATTTTCCCCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418245.5 |
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| CDS TCA 90 bp | AGAGAGAGGAACAACTCTACCCCACTGGTGACATATCCACACCAGTaGGAGCTGATGGCCAATGCTTTCATGGAGTCTGTGTATGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: RERNNSTPLVTYPHQ*ELMANAFMESVYGD Trigger: GTCTCCATACACAGACTCCATGAAAGCATTGGCCATCAGCTCTCACTGGTGTGGATATGTCACCAGTGGGGTAGAGTTGTTCCTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656706.1 |
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| CDS GCA 90 bp | TGCACTGTTCATTTTGTGCAGGATAAATCCAGGCCCTGGGCTGAGTaGCAAACAAGTGAAAAAGACAGCTTCACCCTGATAGTCCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: CTVHFVQDKSRPWAE*QTSEKDSFTLIVPL Trigger: CAGAGGGACTATCAGGGTGAAGCTGTCTTTTTCACTTGTTTGGCACTCAGCCCAGGGCCTGGATTTATCCTGCACAAAATGAACAGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CCA 90 bp | CTCGGAGCACATAACCCCATCTCAAGAGGCTTTCCAGACAAACTCTaGGGATCCAGGCAGCCTTACAATTCTTTAGGTCAGAAATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LGAHNPISRGFPDKL*GSRQPYNSLGQKSK Trigger: TTTGGATTTCTGACCTAAAGAATTGTAAGGCTGCCTGGATCCCCAGAGTTTGTCTGGAAAGCCTCTTGAGATGGGGTTATGTGCTCCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS TCA 90 bp | TGTAGGGGTGAGTTGATGGCTCTGCTGGCTTGTTCAGTGTTGTTCTaGGTTCTTTTAGTCTCTTCAAGGATATTGCCAACACCTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CRGELMALLACSVLF*VLLVSSRILPTPSF Trigger: GAAGGAAGGTGTTGGCAATATCCTTGAAGAGACTAAAAGAACTCAGAACAACACTGAACAAGCCAGCAGAGCCATCAACTCACCCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 ENST00000656706.1 |
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| CDS CCA 90 bp | GCAGCCTTACAATTCTTTAGGTCAGAAATCCAAAATGTGTCTCACTaGGTGAAAATCAAGGTAGAAGCTGTGCCATATTCTCCCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: AALQFFRSEIQNVSH*VKIKVEAVPYSPWR Trigger: CCTCCAGGGAGAATATGGCACAGCTTCTACCTTGATTTTCACCCAGTGAGACACATTTTGGATTTCTGACCTAAAGAATTGTAAGGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS GCA 72 bp | GCCCGCGCGATGGGAGTCAGGGGAGGCAACGTTGTCTaGCCTCCTCTCCTCCCACAGCATGCAGGAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ARAMGVRGGNVV*PPLLPQHAGGQ Trigger: CTGGCCTCCTGCATGCTGTGGGAGGAGAGGAGGGCAGACAACGTTGCCTCCCCTGACTCCCATCGCGCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CAA 90 bp | CCATGGACTCACAAGCCCGCGCGATGGGAGTCAGGGGAGGCAACGTaGTCTGCCCTCCTCTCCTCCCACAGCATGCAGGAGGCCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: PWTHKPARWESGEAT*SALLSSHSMQEASG Trigger: ACCGCTGGCCTCCTGCATGCTGTGGGAGGAGAGGAGGGCAGACAACGTTGCCTCCCCTGACTCCCATCGCGCGGGCTTGTGAGTCCATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CCA 72 bp | GACAACTGCGCTCCATGGACTCACAAGCCCGCGCGATaGGAGTCAGGGGAGGCAACGTTGTCTGCCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: DNCAPWTHKPAR*ESGEATLSALL Trigger: GAGGAGGGCAGACAACGTTGCCTCCCCTGACTCCCATCGCGCGGGCTTGTGAGTCCATGGAGCGCAGTTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CAA 72 bp | GAGCATCCCAGATTGTCCTCTGGAGGCACGTGTGCCTaGAGCCACGGCTGGGGCTCACTCCCAGGACAACGG | + |
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Preference number: 6 (lower is better) Translates to: EHPRLSSGGTCA*SHGWGSLPGQR Trigger: CCGTTGTCCTGGGAGTGAGCCCCAGCCGTGGCTCAAGGCACACGTGCCTCCAGAGGACAATCTGGGATGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CAA 90 bp | ACTGAGTGTTTGAAGCCCGCGCGATGGGAGTCAGGGGAGGCAACGTaGTCTGCCCTCCTCTCCTCCCACAGCATGCAGGAGGCCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: TECLKPARWESGEAT*SALLSSHSMQEASG Trigger: ACCGCTGGCCTCCTGCATGCTGTGGGAGGAGAGGAGGGCAGACAACGTTGCCTCCCCTGACTCCCATCGCGCGGGCTTCAAACACTCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427799.1 |
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| CDS CCA 72 bp | GCTGCATCGGATAGTTCCCTGGACAACTGCGCTCCATaGACTCACAAGCCCGCGCGATGGGAGTCAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: AASDSSLDNCAP*THKPARWESGE Trigger: CTCCCCTGACTCCCATCGCGCGGGCTTGTGAGTCCATGGAGCGCAGTTGTCCAGGGAACTATCCGATGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CCA 72 bp | TTGTCCTCTGGAGGCACGTGTGCCTTGAGCCACGGCTaGGGCTCACTCCCAGGACAACGGTACAGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LSSGGTCALSHG*GSLPGQRYSCC Trigger: ACAGCAGCTGTACCGTTGTCCTGGGAGTGAGCCCCAGCCGTGGCTCAAGGCACACGTGCCTCCAGAGGACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CCA 72 bp | GATGATGAGGAGGGCCCTGTGAGAGGCCCCTGGGGTTaGCCTGTACCTACACGATGTTCTCCTTCTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: DDEEGPVRGPWG*PVPTRCSPSQG Trigger: GCCCTGAGAAGGAGAACATCGTGTAGGTACAGGCCAACCCCAGGGGCCTCTCACAGGGCCCTCCTCATCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS CCA 72 bp | CCTGCCACTGGAGGACCTGGACCTCCTAGCTCTGCTTaGGTGCCACTGTTAGGCTTTCCCCAGATGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PATGGPGPPSSA*VPLLGFPQMKG Trigger: GCCCTTCATCTGGGGAAAGCCTAACAGTGGCACCCAAGCAGAGCTAGGAGGTCCAGGTCCTCCAGTGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS GCA 72 bp | TCCTCTCATGCTGCATCGGATAGTTCCCTGGACAACTaGGCTCCATGGACTCACAAGCCCGCGCGATGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSHAASDSSLDN*APWTHKPARWE Trigger: CTCCCATCGCGCGGGCTTGTGAGTCCATGGAGCGCAGTTGTCCAGGGAACTATCCGATGCAGCATGAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS GCA 72 bp | CACGGCTGGGGCTCACTCCCAGGACAACGGTACAGCTaGTGTAGAGGCATAGGTTTGTCTGCTCTTGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: HGWGSLPGQRYS*CRGIGLSALAP Trigger: TGGGGCAAGAGCAGACAAACCTATGCCTCTACAGCAGCTGTACCGTTGTCCTGGGAGTGAGCCCCAGCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CCA 72 bp | CATGGTTGTCTCACTGAGTGTTTGAAGCCCGCGCGATaGGAGTCAGGGGAGGCAACGTTGTCTGCCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HGCLTECLKPAR*ESGEATLSALL Trigger: GAGGAGGGCAGACAACGTTGCCTCCCCTGACTCCCATCGCGCGGGCTTCAAACACTCAGTGAGACAACCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427799.1 |
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| CDS CAA 90 bp | GGCTCACTCCCAGGACAACGGTACAGCTGCTGTAGAGGCATAGGTTaGTCTGCTCTTGCCCCATCCTTCCTCCTGGGATCCTCGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: GSLPGQRYSCCRGIG*SALAPSFLLGSSEH Trigger: GTGCTCCGAGGATCCCAGGAGGAAGGATGGGGCAAGAGCAGACAAACCTATGCCTCTACAGCAGCTGTACCGTTGTCCTGGGAGTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CCA 72 bp | CATCACCTTCCTCTCATGCTGCATCGGATAGTTCCCTaGACAACTGCGCTCCATGGACTCACAAGCCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: HHLPLMLHRIVP*TTALHGLTSPR Trigger: GCGCGGGCTTGTGAGTCCATGGAGCGCAGTTGTCCAGGGAACTATCCGATGCAGCATGAGAGGAAGGTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CCA 72 bp | GTGAGTGATGATGAGGAGGGCCCTGTGAGAGGCCCCTaGGGTTGGCCTGTACCTACACGATGTTCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VSDDEEGPVRGP*GWPVPTRCSPS Trigger: AGAAGGAGAACATCGTGTAGGTACAGGCCAACCCCAGGGGCCTCTCACAGGGCCCTCCTCATCATCACTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS CAA 90 bp | CTGGGGCTGGCAATGACTGTTGAAGTGTCTCTGCCCTGCCAGGTGTaGAAAGGCTGCGTCTCCTTCACTGTTGCATCCCTAGGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LGLAMTVEVSLPCQV*KGCVSFTVASLGSM Trigger: CATGGACCCTAGGGATGCAACAGTGAAGGAGACGCAGCCTTTCAACACCTGGCAGGGCAGAGACACTTCAACAGTCATTGCCAGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS CAA 72 bp | CCAGGACAACGGTACAGCTGCTGTAGAGGCATAGGTTaGTCTGCTCTTGCCCCATCCTTCCTCCTGGGATCC | + |
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Preference number: 6 (lower is better) Translates to: PGQRYSCCRGIG*SALAPSFLLGS Trigger: GGATCCCAGGAGGAAGGATGGGGCAAGAGCAGACAAACCTATGCCTCTACAGCAGCTGTACCGTTGTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS GCA 72 bp | CTGGGGCTGGCAATGACTGTTGAAGTGTCTCTGCCCTaGCAGGTGTTGAAAGGCTGCGTCTCCTTCACTGTT | + |
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Preference number: 6 (lower is better) Translates to: LGLAMTVEVSLP*QVLKGCVSFTV Trigger: AACAGTGAAGGAGACGCAGCCTTTCAACACCTGGCAGGGCAGAGACACTTCAACAGTCATTGCCAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS CCA 72 bp | CTTTCCAGCTTCCAGGCACTGACAGCATTTCTTGGCTaGTGGCCTCCTTACATTGTCCACTGGGGCTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LSSFQALTAFLG*WPPYIVHWGWQ Trigger: TTGCCAGCCCCAGTGGACAATGTAAGGAGGCCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS CCA 72 bp | TTGCCTTTCCAGCTTCCAGGCACTGACAGCATTTCTTaGCTGGTGGCCTCCTTACATTGTCCACTGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LPFQLPGTDSIS*LVASLHCPLGL Trigger: CAGCCCCAGTGGACAATGTAAGGAGGCCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS TCA 72 bp | CTCCTTACATTGTCCACTGGGGCTGGCAATGACTGTTaGAGTGTCTCTGCCCTGCCAGGTGTTGAAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLTLSTGAGNDC*SVSALPGVERL Trigger: CAGCCTTTCAACACCTGGCAGGGCAGAGACACTTCAACAGTCATTGCCAGCCCCAGTGGACAATGTAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS TCA 72 bp | GGTGGCCTCCTTACATTTCTGCTGTGCAATGATCCTTaGGGTGAACTTGGGGCACTGGAAACAGTCTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: GGLLTFLLCNDP*GELGALETVSG Trigger: CCCCGAGACTGTTTCCAGTGCCCCAAGTTCACCTCAAGGATCATTGCACAGCAGAAATGTAAGGAGGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418245.5 |
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| CDS GCA 72 bp | AAGCCCAGAACAGCTTTCTCTCATCTCAAGGTGGGATaGCGCTGCATCACCTTCCTCTCATGCTGCATCGGA | + |
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Preference number: 6 (lower is better) Translates to: KPRTAFSHLKVG*RCITFLSCCIG Trigger: TCCGATGCAGCATGAGAGGAAGGTGATGCAGCGGCATCCCACCTTGAGATGAGAGAAAGCTGTTCTGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS GCA 72 bp | CTGCCAGGTGTTGAAAGGCTGCGTCTCCTTCACTGTTaGATCCCTAGGGTCCATGGTTGTCTCACTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: LPGVERLRLLHC*IPRVHGCLTEC Trigger: ACACTCAGTGAGACAACCATGGACCCTAGGGATGCAACAGTGAAGGAGACGCAGCCTTTCAACACCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS GCA 72 bp | GGTGCCACTGTTAGGCTTTCCCCAGATGAAGGGCCCTaGACTGTTCATTTTGTGCAGGATAAATCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GATVRLSPDEGP*TVHFVQDKSRP Trigger: GGGCCTGGATTTATCCTGCACAAAATGAACAGTGCAGGGCCCTTCATCTGGGGAAAGCCTAACAGTGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS CCA 72 bp | ACTGGAAGCCCAGAACAGCTTTCTCTCATCTCAAGGTaGGATGCCGCTGCATCACCTTCCTCTCATGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: TGSPEQLSLISR*DAAASPSSHAA Trigger: TGCAGCATGAGAGGAAGGTGATGCAGCGGCATCCCACCTTGAGATGAGAGAAAGCTGTTCTGGGCTTCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CAA 90 bp | CCACTGTTAGGCTTTCCCCAGATGAAGGGCCCTGCACTGTTCATTTaGTGCAGGATAAATCCAGGCCCTGGGCTGAGTGCCAAACAAGTG | + |
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Preference number: 6 (lower is better) Translates to: PLLGFPQMKGPALFI*CRINPGPGLSAKQV Trigger: CACTTGTTTGGCACTCAGCCCAGGGCCTGGATTTATCCTGCACAAAATGAACAGTGCAGGGCCCTTCATCTGGGGAAAGCCTAACAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS GCA 72 bp | TTTCCCCAGATGAAGGGCCCTGCACTGTTCATTTTGTaGAGGATAAATCCAGGCCCTGGGCTGAGTGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FPQMKGPALFIL*RINPGPGLSAK Trigger: TTTGGCACTCAGCCCAGGGCCTGGATTTATCCTGCACAAAATGAACAGTGCAGGGCCCTTCATCTGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CCA 72 bp | GGTATGGGCAAAGGAGTGACCTCAGCTGCCAATCACTaGAAGCCCAGAACAGCTTTCTCTCATCTCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GMGKGVTSAANH*KPRTAFSHLKV Trigger: CACCTTGAGATGAGAGAAAGCTGTTCTGGGCTTCCAGTGATTGGCAGCTGAGGTCACTCCTTTGCCCATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000418245.5 |
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| CDS CAA 90 bp | CTTCACTGTTGCATCCCTAGGGTCCATGGTTGTCTCACTGAGTGTTaGCTGAATAGAGAGGTGAGTGATGATGAGGAGGGCCCTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LHCCIPRVHGCLTEC*LNREVSDDEEGPVR Trigger: TCTCACAGGGCCCTCCTCATCATCACTCACCTCTCTATTCAGCAAACACTCAGTGAGACAACCATGGACCCTAGGGATGCAACAGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS CAA 90 bp | GCTGTGCCATATTCTCCCTGGAGGTTCTGGGGAAAATCCATTTCATaGCCTTTCCAGCTTCCAGGCACTGACAGCATTTCTTGGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: AVPYSPWRFWGKSIS*PFQLPGTDSISWLV Trigger: CACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGATTTTCCCCAGAACCTCCAGGGAGAATATGGCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CCA 72 bp | TTGCCTTTCCAGCTTCCAGGCACTGACAGCATTTCTTaGCTGGTGGCCTCCTTACATTTCTGCTGTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: LPFQLPGTDSIS*LVASLHFCCAM Trigger: CATTGCACAGCAGAAATGTAAGGAGGCCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418245.5 |
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| CDS CAA 72 bp | TGCATCCCTAGGGTCCATGGTTGTCTCACTGAGTGTTaGCTGAATAGAGAGGTGAGTGATGATGAGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: CIPRVHGCLTEC*LNREVSDDEEG Trigger: GCCCTCCTCATCATCACTCACCTCTCTATTCAGCAAACACTCAGTGAGACAACCATGGACCCTAGGGATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS TCA 72 bp | TCATGGAGTCTGTGTATGGAGACTGTAGGGGTGAGTTaGTGGCTCTGCTGGCTTGTTCAGTGTTGTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SWSLCMETVGVS*WLCWLVQCCSE Trigger: CTCAGAACAACACTGAACAAGCCAGCAGAGCCATCAACTCACCCCTACAGTCTCCATACACAGACTCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 ENST00000656706.1 |
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| CDS TCA 72 bp | AACAACTCTACCCCACTGGTGACATATCCACACCAGTaGGAGCTGATGGCCAATGCTTTCATGGAGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: NNSTPLVTYPHQ*ELMANAFMESV Trigger: CACAGACTCCATGAAAGCATTGGCCATCAGCTCTCACTGGTGTGGATATGTCACCAGTGGGGTAGAGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656706.1 |
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| CDS CCA 72 bp | CATAACCCCATCTCAAGAGGCTTTCCAGACAAACTCTaGGGATCCAGGCAGCCTTACAATTCTTTAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: HNPISRGFPDKL*GSRQPYNSLGQ Trigger: CTGACCTAAAGAATTGTAAGGCTGCCTGGATCCCCAGAGTTTGTCTGGAAAGCCTCTTGAGATGGGGTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS TCA 72 bp | AAAATCCATTTCATTGCCTTTCCAGCTTCCAGGCACTaGCAGCATTTCTTGGCTGGTGGCCTCCTTACATTG | + |
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Preference number: 6 (lower is better) Translates to: KIHFIAFPASRH*QHFLAGGLLTL Trigger: CAATGTAAGGAGGCCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367207.7 ENST00000427799.1 |
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| CDS GCA 72 bp | ATTCTCCCTGGAGGTTCTGGGGAAAATCCATTTCATTaGCTTTCCAGCTTCCAGGCACTGACAGCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILPGGSGENPFH*LSSFQALTAFL Trigger: AAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGATTTTCCCCAGAACCTCCAGGGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS GCA 72 bp | CATTTTGTGCAGGATAAATCCAGGCCCTGGGCTGAGTaGCAAACAAGTGAAAAAGACAGCTTCACCCTGATA | + |
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Preference number: 6 (lower is better) Translates to: HFVQDKSRPWAE*QTSEKDSFTLI Trigger: TATCAGGGTGAAGCTGTCTTTTTCACTTGTTTGGCACTCAGCCCAGGGCCTGGATTTATCCTGCACAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS CAA 72 bp | TATTCTCCCTGGAGGTTCTGGGGAAAATCCATTTCATaGCCTTTCCAGCTTCCAGGCACTGACAGCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: YSPWRFWGKSIS*PFQLPGTDSIS Trigger: AGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGATTTTCCCCAGAACCTCCAGGGAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 |
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| CDS TCA 72 bp | AAAATCCATTTCATTGCCTTTCCAGCTTCCAGGCACTaGCAGCATTTCTTGGCTGGTGGCCTCCTTACATTT | + |
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Preference number: 6 (lower is better) Translates to: KIHFIAFPASRH*QHFLAGGLLTF Trigger: AAATGTAAGGAGGCCACCAGCCAAGAAATGCTGTCAGTGCCTGGAAGCTGGAAAGGCAATGAAATGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418245.5 |
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| CDS TCA 72 bp | GAGTTGATGGCTCTGCTGGCTTGTTCAGTGTTGTTCTaGGTTCTTTTAGTCTCTTCAAGGATATTGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: ELMALLACSVLF*VLLVSSRILPT Trigger: TGTTGGCAATATCCTTGAAGAGACTAAAAGAACTCAGAACAACACTGAACAAGCCAGCAGAGCCATCAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367207.7 ENST00000418245.5 ENST00000427799.1 ENST00000656706.1 |
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| CDS GCA 72 bp | GGACATCATCCCCAATATTATTGTGTCCTAAACCAATaGCGGCTACTGACAATATCCAGACTTCTTGCTATT | + |
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Preference number: 6 (lower is better) Translates to: GHHPQYYCVLNQ*RLLTISRLLAI Trigger: AATAGCAAGAAGTCTGGATATTGTCAGTAGCCGGCATTGGTTTAGGACACAATAATATTGGGGATGATGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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| CDS CAA 72 bp | GGCCAAGAAAAATACAGGACATCATCCCCAATATTATaGTGTCCTAAACCAATGCCGGCTACTGACAATATC | + |
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Preference number: 6 (lower is better) Translates to: GQEKYRTSSPIL*CPKPMPATDNI Trigger: GATATTGTCAGTAGCCGGCATTGGTTTAGGACACAATAATATTGGGGATGATGTCCTGTATTTTTCTTGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367207.7 |
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