Pregenerated sensors for LINC00276 (Homo sapiens)
Ensembl gene IDs: ENSG00000230448Ensembl transcript IDs: ENST00000417751.5, ENST00000418420.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGCCTCCCAGCCATGCCTCCTGTCTCGAGGTGTTCTTGCTTCCTaGTCTCACTGGTTGGTTTCTTGGCCATCAATTGGGTGGATTAAT | + |
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Preference number: 5 (lower is better) Translates to: EASQPCLLSRGVLAS*SHWLVSWPSIGWIN Trigger: ATTAATCCACCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGAGGCATGGCTGGGAGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS GCA 90 bp | TTTGCCTTCTGCCATGATTATACGTTTCCTGAGGCCTCCCAGCCATaGCTCCTGTCTCGAGGTGTTCTTGCTTCCTGCTCTCACTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: FAFCHDYTFPEASQP*LLSRGVLASCSHWL Trigger: CAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGAGGCATGGCTGGGAGGCCTCAGGAAACGTATAATCATGGCAGAAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CCA 90 bp | CAGCCATGCCTCCTGTCTCGAGGTGTTCTTGCTTCCTGCTCTCACTaGTTGGTTTCTTGGCCATCAATTGGGTGGATTAATCCTTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: QPCLLSRGVLASCSH*LVSWPSIGWINPLH Trigger: GTGCAAAGGATTAATCCACCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGAGGCATGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CCA 90 bp | CAGCTCACTGTCCTGTCTCGAGGTGTTCTTGCTTCCTGCTCTCACTaGTTGGTTTCTTGGCCATCAATTGGGTGGATTAATCCTTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: QLTVLSRGVLASCSH*LVSWPSIGWINPLH Trigger: GTGCAAAGGATTAATCCACCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGACAGTGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS CCA 90 bp | CATGCCTCCTGTCTCGAGGTGTTCTTGCTTCCTGCTCTCACTGGTTaGTTTCTTGGCCATCAATTGGGTGGATTAATCCTTTGCACTGGT | + |
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Preference number: 5 (lower is better) Translates to: HASCLEVFLLPALTG*FLGHQLGGLILCTG Trigger: ACCAGTGCAAAGGATTAATCCACCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGAGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CCA 90 bp | TCACTGTCCTGTCTCGAGGTGTTCTTGCTTCCTGCTCTCACTGGTTaGTTTCTTGGCCATCAATTGGGTGGATTAATCCTTTGCACTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLSCLEVFLLPALTG*FLGHQLGGLILCTG Trigger: ACCAGTGCAAAGGATTAATCCACCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGACAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS GCA 90 bp | AATGTTGTCCAGCTCACTGTCCTGTCTCGAGGTGTTCTTGCTTCCTaGTCTCACTGGTTGGTTTCTTGGCCATCAATTGGGTGGATTAAT | + |
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Preference number: 5 (lower is better) Translates to: NVVQLTVLSRGVLAS*SHWLVSWPSIGWIN Trigger: ATTAATCCACCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGACAGTGAGCTGGACAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS TCA 90 bp | CTTCTTTCTGTGTCTTCACATGATGTAAGGAGCAAGAGTCTCTCTTaGGTCTGTTCTACAAGGGCAGTCATCTCATTCATGAGAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: LLSVSSHDVRSKSLS*VCSTRAVISFMRTP Trigger: TGGAGTTCTCATGAATGAGATGACTGCCCTTGTAGAACAGACTCAAGAGAGACTCTTGCTCCTTACATCATGTGAAGACACAGAAAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS TCA 90 bp | TACCACATTTTCCTTATCCAGTCCACCATTGATCAGCATCAAGGTTaGTCCCATGTCTTTGCTGTCTTTGCTACTGTGAATAGTGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: YHIFLIQSTIDQHQG*SHVFAVFATVNSVA Trigger: TGCGACACTATTCACAGTAGCAAAGACAGCAAAGACATGGGATCAACCTTGATGCTGATCAATGGTGGACTGGATAAGGAAAATGTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS GCA 90 bp | TTTAGGTTCAAGGAGTACATATGCAGGTTTGCTACATGGGTAAACTaGCTGTCATGGGAGTTTTGTGTACAGATTATTTCATCACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FRFKEYICRFATWVN*LSWEFCVQIISSPR Trigger: CCTGGGTGATGAAATAATCTGTACACAAAACTCCCATGACAGGCAGTTTACCCATGTAGCAAACCTGCATATGTACTCCTTGAACCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CCA 90 bp | TTGGCAGTTCATTGTTTATTCAATGTTTGCACATCCCTGGGAATTTaGAACTCATTTTATTTGAGTGAGTCCAGCTGGAGCAACTCTACT | + |
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Preference number: 5 (lower is better) Translates to: LAVHCLFNVCTSLGI*NSFYLSESSWSNST Trigger: AGTAGAGTTGCTCCAGCTGGACTCACTCAAATAAAATGAGTTCCAAATTCCCAGGGATGTGCAAACATTGAATAAACAATGAACTGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 90 bp | CGTTTCCTGAGGCCTCCCAGCCATGCCTCCTGTCTCGAGGTGTTCTaGCTTCCTGCTCTCACTGGTTGGTTTCTTGGCCATCAATTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RFLRPPSHASCLEVF*LPALTGWFLGHQLG Trigger: ACCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGAGGCATGGCTGGGAGGCCTCAGGAAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS GCA 72 bp | CAGCCATGCCTCCTGTCTCGAGGTGTTCTTGCTTCCTaGTCTCACTGGTTGGTTTCTTGGCCATCAATTGGG | + |
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Preference number: 6 (lower is better) Translates to: QPCLLSRGVLAS*SHWLVSWPSIG Trigger: CCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGAGGCATGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS GCA 72 bp | TGCCATGATTATACGTTTCCTGAGGCCTCCCAGCCATaGCTCCTGTCTCGAGGTGTTCTTGCTTCCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: CHDYTFPEASQP*LLSRGVLASCS Trigger: AGAGCAGGAAGCAAGAACACCTCGAGACAGGAGGCATGGCTGGGAGGCCTCAGGAAACGTATAATCATGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 72 bp | GCCTCTGGATGTGAGTGGGAGGGGCACTATTCTCCTTaGGTTTGGGGGAAGCCCAGTGTCTTTCTGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: ASGCEWEGHYSP*VWGKPSVFLNP Trigger: TGGATTCAGAAAGACACTGGGCTTCCCCCAAACCAAAGGAGAATAGTGCCCCTCCCACTCACATCCAGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS GCA 72 bp | CAGCTCACTGTCCTGTCTCGAGGTGTTCTTGCTTCCTaGTCTCACTGGTTGGTTTCTTGGCCATCAATTGGG | + |
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Preference number: 6 (lower is better) Translates to: QLTVLSRGVLAS*SHWLVSWPSIG Trigger: CCCAATTGATGGCCAAGAAACCAACCAGTGAGAGCAGGAAGCAAGAACACCTCGAGACAGGACAGTGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS CCA 72 bp | GGATGTGAGTGGGAGGGGCACTATTCTCCTTTGGTTTaGGGGAAGCCCAGTGTCTTTCTGAATCCAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GCEWEGHYSPLV*GKPSVFLNPKE Trigger: CTCCTTTGGATTCAGAAAGACACTGGGCTTCCCCCAAACCAAAGGAGAATAGTGCCCCTCCCACTCACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 90 bp | CCTCATGACCTCAGTTGCAAATGCAGAAATCACCCATCTTCTGAGTaGCTCACGCTGGGAGCTGTAGACCAGAGCTGTTTCTATTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PHDLSCKCRNHPSSE*LTLGAVDQSCFYSA Trigger: GGCCGAATAGAAACAGCTCTGGTCTACAGCTCCCAGCGTGAGCAACTCAGAAGATGGGTGATTTCTGCATTTGCAACTGAGGTCATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS TCA 72 bp | CCCATGTGTCATGGTAGGGACTTGGTAGGAGGTAACTaGATCACGGGGATGGGTTTTTCTCATGCTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PMCHGRDLVGGN*ITGMGFSHAVL Trigger: GAGAACAGCATGAGAAAAACCCATCCCCGTGATTCAGTTACCTCCTACCAAGTCCCTACCATGACACATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 72 bp | CTCAGTTGCAAATGCAGAAATCACCCATCTTCTGAGTaGCTCACGCTGGGAGCTGTAGACCAGAGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LSCKCRNHPSSE*LTLGAVDQSCF Trigger: GAAACAGCTCTGGTCTACAGCTCCCAGCGTGAGCAACTCAGAAGATGGGTGATTTCTGCATTTGCAACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS TCA 72 bp | AGGGCAGTCATCTCATTCATGAGAACTCCATCCTCATaGCCTCAGTTGCAAATGCAGAAATCACCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RAVISFMRTPSS*PQLQMQKSPIF Trigger: GAAGATGGGTGATTTCTGCATTTGCAACTGAGGTCATGAGGATGGAGTTCTCATGAATGAGATGACTGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS TCA 72 bp | CTTGAGTCTGTTCTACAAGGGCAGTCATCTCATTCATaGGAACTCCATCCTCATGACCTCAGTTGCAAATGC | + |
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Preference number: 6 (lower is better) Translates to: LESVLQGQSSHS*ELHPHDLSCKC Trigger: GCATTTGCAACTGAGGTCATGAGGATGGAGTTCTCATGAATGAGATGACTGCCCTTGTAGAACAGACTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS TCA 72 bp | TTATGGTTTGGCTGTGTCCCTAGTCCAATCTCATTTTaGACTGTAGCTCCCATAATCCCCATGTGTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: LWFGCVPSPISF*TVAPIIPMCHG Trigger: ACCATGACACATGGGGATTATGGGAGCTACAGTTCAAAATGAGATTGGACTAGGGACACAGCCAAACCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS TCA 72 bp | TTCCTTATCCAGTCCACCATTGATCAGCATCAAGGTTaGTCCCATGTCTTTGCTGTCTTTGCTACTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: FLIQSTIDQHQG*SHVFAVFATVN Trigger: ATTCACAGTAGCAAAGACAGCAAAGACATGGGATCAACCTTGATGCTGATCAATGGTGGACTGGATAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CCA 72 bp | ATATGCAGGTTTGCTACATGGGTAAACTGCCTGTCATaGGAGTTTTGTGTACAGATTATTTCATCACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ICRFATWVNCLS*EFCVQIISSPR Trigger: CCTGGGTGATGAAATAATCTGTACACAAAACTCCCATGACAGGCAGTTTACCCATGTAGCAAACCTGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 90 bp | TTCCTTCAGCAAATATTTAACTTATTACAAGATACAGCTTCCCCTTaGCCTTCTGCCATGATTATACGTTTCCTGAGGCCTCCCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: FLQQIFNLLQDTASP*PSAMIIRFLRPPSH Trigger: ATGGCTGGGAGGCCTCAGGAAACGTATAATCATGGCAGAAGGCAAAGGGGAAGCTGTATCTTGTAATAAGTTAAATATTTGCTGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS TCA 72 bp | TCTAGAGAAGGAAATGAGTTGGTTATTGCTGCTGAATaGTGCCTCCTTTATCTTCATCCTGCTCTTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SREGNELVIAAE*CLLYLHPALLS Trigger: ACTCAGAAGAGCAGGATGAAGATAAAGGAGGCATCATTCAGCAGCAATAACCAACTCATTTCCTTCTCTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417751.5 ENST00000418420.1 |
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| CDS CAA 72 bp | GTTTGCACATCCCTGGGAATTTGGAACTCATTTTATTaGAGTGAGTCCAGCTGGAGCAACTCTACTATTAGA | + |
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Preference number: 6 (lower is better) Translates to: VCTSLGIWNSFY*SESSWSNSTIR Trigger: TCTAATAGTAGAGTTGCTCCAGCTGGACTCACTCAAATAAAATGAGTTCCAAATTCCCAGGGATGTGCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 72 bp | GTTGCAAAGGCTTTTGAAAGCTTTGTCATAAAATCTTaGTCAGGGCCTCTGTCCAAGGTGATATTTCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: VAKAFESFVIKS*SGPLSKVIFPR Trigger: CCTAGGAAATATCACCTTGGACAGAGGCCCTGACAAAGATTTTATGACAAAGCTTTCAAAAGCCTTTGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 72 bp | TGTATAAGTACCACATTTTCCTTATCCAGTCCACCATaGATCAGCATCAAGGTTGATCCCATGTCTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CISTTFSLSSPP*ISIKVDPMSLL Trigger: CAGCAAAGACATGGGATCAACCTTGATGCTGATCAATGGTGGACTGGATAAGGAAAATGTGGTACTTATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 72 bp | GTTTGCTACATGGGTAAACTGCCTGTCATGGGAGTTTaGTGTACAGATTATTTCATCACCCAGGTAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: VCYMGKLPVMGV*CTDYFITQVMN Trigger: GTTCATTACCTGGGTGATGAAATAATCTGTACACAAAACTCCCATGACAGGCAGTTTACCCATGTAGCAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 90 bp | ATTGCATGGTGTATAAGTACCACATTTTCCTTATCCAGTCCACCATaGATCAGCATCAAGGTTGATCCCATGTCTTTGCTGTCTTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: IAWCISTTFSLSSPP*ISIKVDPMSLLSLL Trigger: TAGCAAAGACAGCAAAGACATGGGATCAACCTTGATGCTGATCAATGGTGGACTGGATAAGGAAAATGTGGTACTTATACACCATGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 90 bp | CATATGCAGGTTTGCTACATGGGTAAACTGCCTGTCATGGGAGTTTaGTGTACAGATTATTTCATCACCCAGGTAATGAACATAGTATCA | + |
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Preference number: 6 (lower is better) Translates to: HMQVCYMGKLPVMGV*CTDYFITQVMNIVS Trigger: TGATACTATGTTCATTACCTGGGTGATGAAATAATCTGTACACAAAACTCCCATGACAGGCAGTTTACCCATGTAGCAAACCTGCATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS TCA 72 bp | AGTCCAAGATCAAGGAACGGTTTCCTGATTCATAGATaGTACCTTCTTTCTGTGTCTTCACATGATGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: SPRSRNGFLIHR*YLLSVSSHDVR Trigger: CCTTACATCATGTGAAGACACAGAAAGAAGGTATCATCTATGAATCAGGAAACCGTTCCTTGATCTTGGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417751.5 |
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| CDS CCA 72 bp | CATTGTTTATTCAATGTTTGCACATCCCTGGGAATTTaGAACTCATTTTATTTGAGTGAGTCCAGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HCLFNVCTSLGI*NSFYLSESSWS Trigger: GCTCCAGCTGGACTCACTCAAATAAAATGAGTTCCAAATTCCCAGGGATGTGCAAACATTGAATAAACAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS TCA 72 bp | GCTGTTCTCTTGATAATGAATAAGTCTCATGAGATCTaGTGGTTTTATGACGGGGTTGTATCTAATGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: AVLLIMNKSHEI*WFYDGVVSNGC Trigger: GCAACCATTAGATACAACCCCGTCATAAAACCATCAGATCTCATGAGACTTATTCATTATCAAGAGAACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CCA 72 bp | GACTTTTCAGTAATAGCCATTCTGACTGGTATGAGATaGTATCTCACTGTGGTTTTGACTTGCATTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: DFSVIAILTGMR*YLTVVLTCISL Trigger: TAGAGAAATGCAAGTCAAAACCACAGTGAGATACCATCTCATACCAGTCAGAATGGCTATTACTGAAAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 72 bp | ATAAGTCTCATGAGATCTGATGGTTTTATGACGGGGTaGTATCTAATGGTTGCATTCATGAACATCCATGGT | + |
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Preference number: 6 (lower is better) Translates to: ISLMRSDGFMTG*YLMVAFMNIHG Trigger: ACCATGGATGTTCATGAATGCAACCATTAGATACAACCCCGTCATAAAACCATCAGATCTCATGAGACTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS TCA 72 bp | AGCTGGAGCAACTCTACTATTAGAAATCCATGTATCTaGAGAGTCTACTCCTTACTTCTACTTGTTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: SWSNSTIRNPCI*RVYSLLLLVDL Trigger: AAGATCAACAAGTAGAAGTAAGGAGTAGACTCTTCAGATACATGGATTTCTAATAGTAGAGTTGCTCCAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CCA 72 bp | TTTGAGAAGTGTCTGTTCGTCTTCTTTGCACATTTTTaGATAGGGTTGTTCACTCCTTGTTTGTTAATTTGT | + |
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Preference number: 6 (lower is better) Translates to: FEKCLFVFFAHF*IGLFTPCLLIC Trigger: ACAAATTAACAAACAAGGAGTGAACAACCCTATCCAAAAATGTGCAAAGAAGACGAACAGACACTTCTCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS GCA 72 bp | TACCTAATCTTGGCAGTTCATTGTTTATTCAATGTTTaGACATCCCTGGGAATTTGGAACTCATTTTATTTG | + |
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Preference number: 6 (lower is better) Translates to: YLILAVHCLFNV*TSLGIWNSFYL Trigger: CAAATAAAATGAGTTCCAAATTCCCAGGGATGTGCAAACATTGAATAAACAATGAACTGCCAAGATTAGGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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| CDS CAA 72 bp | ATTCTGACTGGTATGAGATGGTATCTCACTGTGGTTTaGACTTGCATTTCTCTAAATATTTGTGATGATAAG | + |
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Preference number: 6 (lower is better) Translates to: ILTGMRWYLTVV*TCISLNICDDK Trigger: CTTATCATCACAAATATTTAGAGAAATGCAAGTCAAAACCACAGTGAGATACCATCTCATACCAGTCAGAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418420.1 |
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