Pregenerated sensors for LINC00265 (Homo sapiens)
Ensembl gene IDs: ENSG00000188185Ensembl transcript IDs: ENST00000340510.8, ENST00000654922.1, ENST00000656108.1, ENST00000656391.1, ENST00000656645.1, ENST00000658784.1, ENST00000665200.1, ENST00000666283.1, ENST00000668152.1, ENST00000674829.1, ENST00000675279.1, ENST00000675949.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCTCTCCTCCAGCAGGCCGGGGAGGCCTACGTGGGCGGCTTCGTTaGAGCCAGCTTGCCGTTGTCACGGAAATCTCCTCCGGCGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: PSPPAGRGGLRGRLR*SQLAVVTEISSGVS Trigger: GGAGACGCCGGAGGAGATTTCCGTGACAACGGCAAGCTGGCTGCAACGAAGCCGCCCACGTAGGCCTCCCCGGCCTGCTGGAGGAGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS GCA 90 bp | CAGACCCAGCCACTGGCCTTGAAGTCCGGATGGAAGCTTGGCGCTTaGCTCGCCTCGTCTTCCTTCCGCCCTGGTGCTGAGCGGCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: QTQPLALKSGWKLGA*LASSSFRPGAERLV Trigger: GACTAGCCGCTCAGCACCAGGGCGGAAGGAAGACGAGGCGAGGCAAGCGCCAAGCTTCCATCCGGACTTCAAGGCCAGTGGCTGGGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654922.1 ENST00000656108.1 ENST00000665200.1 ENST00000666283.1 |
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| CDS TCA 90 bp | AGACTAGGAGGCCGTGTTGAGAAAACCAGACCCAGCCACTGGCCTTaGAGTCCGGATGGAAGCTTGGCGCTTGCCTCGCCTCGTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RLGGRVEKTRPSHWP*SPDGSLALASPRLP Trigger: AGGAAGACGAGGCGAGGCAAGCGCCAAGCTTCCATCCGGACTTCAAGGCCAGTGGCTGGGTCTGGTTTTCTCAACACGGCCTCCTAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654922.1 ENST00000656108.1 ENST00000656645.1 ENST00000665200.1 ENST00000666283.1 ENST00000674829.1 ENST00000675279.1 |
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| CDS TCA 90 bp | AAGAAAAACAGATGCCCAAGCGGGAAGGAGACTAGGAGGCCGTGTTaGGAAAACCAGACCCAGCCACTGGCCTTGAAGTCCGGATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: KKNRCPSGKETRRPC*ENQTQPLALKSGWK Trigger: CTTCCATCCGGACTTCAAGGCCAGTGGCTGGGTCTGGTTTTCTCAACACGGCCTCCTAGTCTCCTTCCCGCTTGGGCATCTGTTTTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000340510.8 ENST00000654922.1 ENST00000656108.1 ENST00000656645.1 ENST00000665200.1 ENST00000666283.1 ENST00000674829.1 ENST00000675279.1 ENST00000675949.1 |
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| CDS CCA 90 bp | CCAAGGCAGGAAAATCCCTTGAGTGCAGGAGTTCAAGGTCAGCCATaGCAACATAGTGCGGCCCCATCTCTGAATAACATGTTGCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: PRQENPLSAGVQGQP*QHSAAPSLNNMLPS Trigger: ACTGGGCAACATGTTATTCAGAGATGGGGCCGCACTATGTTGCCATGGCTGACCTTGAACTCCTGCACTCAAGGGATTTTCCTGCCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656108.1 |
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| CDS TCA 90 bp | ATTATTTACAGCGGAAAAAGGCAGAGGTTGCATCTGCATGCCACATaGCTCAGGCTGCATAGCCACATTCCTCTCAAGGCTCGGGATCAT | + |
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Preference number: 5 (lower is better) Translates to: IIYSGKRQRLHLHAT*LRLHSHIPLKARDH Trigger: ATGATCCCGAGCCTTGAGAGGAATGTGGCTATGCAGCCTGAGTCATGTGGCATGCAGATGCAACCTCTGCCTTTTTCCGCTGTAAATAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000340510.8 ENST00000654922.1 ENST00000656108.1 ENST00000656391.1 ENST00000656645.1 ENST00000658784.1 ENST00000665200.1 ENST00000666283.1 ENST00000668152.1 ENST00000674829.1 ENST00000675279.1 ENST00000675949.1 |
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| CDS TCA 90 bp | GTGTTCTTTTCTGGCAGCCAAATAGAGACTTCCTGCAGCAGCTCCTaGAGTGGGAAAGCTTTCAACACCACCATGCAATTTGGAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: VFFSGSQIETSCSSS*SGKAFNTTMQFGIS Trigger: AGAAATTCCAAATTGCATGGTGGTGTTGAAAGCTTTCCCACTTCAGGAGCTGCTGCAGGAAGTCTCTATTTGGCTGCCAGAAAAGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658784.1 ENST00000674829.1 |
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| CDS TCA 90 bp | TCTACACATCATCCCACAACAGCAGGCAGAAGGACAAGAGACTGTTaGGTGACTCAGCTTTTAGGTGTTCTTTTCTGGCAGCCAAATAGA | + |
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Preference number: 5 (lower is better) Translates to: STHHPTTAGRRTRDC*VTQLLGVLFWQPNR Trigger: TCTATTTGGCTGCCAGAAAAGAACACCTAAAAGCTGAGTCACTCAACAGTCTCTTGTCCTTCTGCCTGCTGTTGTGGGATGATGTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658784.1 |
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| CDS CCA 90 bp | CTTTTCTGGCAGCCAAATAGAGACTTCCTGCAGCAGCTCCTGAAGTaGGAAAGCTTTCAACACCACCATGCAATTTGGAATTTCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LFWQPNRDFLQQLLK*ESFQHHHAIWNFSK Trigger: TTTGGAGAAATTCCAAATTGCATGGTGGTGTTGAAAGCTTTCCCACTTCAGGAGCTGCTGCAGGAAGTCTCTATTTGGCTGCCAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658784.1 ENST00000674829.1 |
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| CDS TCA 90 bp | AGCCAGGAAGGATGGAGATACTTTTCTGAAGAAGAGAGTTGCTTTTaGCTTGACAACTCTCCACAGGGTATAACAAGGCAAGCATCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SQEGWRYFSEEESCF*LDNSPQGITRQASK Trigger: CTTTGATGCTTGCCTTGTTATACCCTGTGGAGAGTTGTCAAGTCAAAAGCAACTCTCTTCTTCAGAAAAGTATCTCCATCCTTCCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS GCA 90 bp | ACCTGGCCTCAGGTATTCTTGTTTAATCCTGTCAGCAGGTTGAGTTaGCGCACTTGTGCTCCAAGTTTGATATATAAAGGATCAACATCT | + |
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Preference number: 5 (lower is better) Translates to: TWPQVFLFNPVSRLS*RTCAPSLIYKGSTS Trigger: AGATGTTGATCCTTTATATATCAAACTTGGAGCACAAGTGCGGCAACTCAACCTGCTGACAGGATTAAACAAGAATACCTGAGGCCAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656645.1 |
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| CDS CCA 90 bp | TGCCGCACTTGTGCTCCAAGTTTGATATATAAAGGATCAACATCTTaGATGCTACTTGGTCTTCTTAATTATTTACAGCGGAAAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: CRTCAPSLIYKGSTS*MLLGLLNYLQRKKA Trigger: TGCCTTTTTCCGCTGTAAATAATTAAGAAGACCAAGTAGCATCCAAGATGTTGATCCTTTATATATCAAACTTGGAGCACAAGTGCGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656645.1 |
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| CDS GCA 90 bp | TTTAGTATTTCATCAAACATTGAACCAACTTCGGCAGAGAAGATCTaGTCTAAGAGGACAAGATTTCCAGTTCATACTGAAGTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: FSISSNIEPTSAEKI*SKRTRFPVHTEVFI Trigger: GATGAAGACTTCAGTATGAACTGGAAATCTTGTCCTCTTAGAGCAGATCTTCTCTGCCGAAGTTGGTTCAATGTTTGATGAAATACTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS GCA 72 bp | CTTCCGGTTTCCGGGTTCTCCGGGTGTAGCCGCCTCTaGCCCGGGGGATCCCCTCTCCTCCAGCAGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: LPVSGFSGCSRL*PGGSPLLQQAG Trigger: CCCGGCCTGCTGGAGGAGAGGGGATCCCCCGGGGCAGAGGCGGCTACACCCGGAGAACCCGGAAACCGGAAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000654922.1 ENST00000656108.1 ENST00000666283.1 |
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| CDS CAA 90 bp | CCCCTCTCCTCCAGCAGGCCGGGGAGGCCTACGTGGGCGGCTTCGTaGCAGCCAGCTTGCCGTTGTCACGGAAATCTCCTCCGGCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PLSSSRPGRPTWAAS*QPACRCHGNLLRRL Trigger: GAGACGCCGGAGGAGATTTCCGTGACAACGGCAAGCTGGCTGCAACGAAGCCGCCCACGTAGGCCTCCCCGGCCTGCTGGAGGAGAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS GCA 72 bp | CCAGCAGGCCGGGGAGGCCTACGTGGGCGGCTTCGTTaGAGCCAGCTTGCCGTTGTCACGGAAATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PAGRGGLRGRLR*SQLAVVTEISS Trigger: GGAGGAGATTTCCGTGACAACGGCAAGCTGGCTGCAACGAAGCCGCCCACGTAGGCCTCCCCGGCCTGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS CCA 72 bp | GACCCAGCCACTGGCCTTGAAGTCCGGATGGAAGCTTaGCGCTTGCCTCGCCTCGTCTTCCTTCCGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: DPATGLEVRMEA*RLPRLVFLPPW Trigger: CCAGGGCGGAAGGAAGACGAGGCGAGGCAAGCGCCAAGCTTCCATCCGGACTTCAAGGCCAGTGGCTGGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654922.1 ENST00000656108.1 ENST00000665200.1 ENST00000666283.1 ENST00000674829.1 |
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| CDS CAA 72 bp | TCCAGCAGGCCGGGGAGGCCTACGTGGGCGGCTTCGTaGCAGCCAGCTTGCCGTTGTCACGGAAATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSRPGRPTWAAS*QPACRCHGNLL Trigger: GAGGAGATTTCCGTGACAACGGCAAGCTGGCTGCAACGAAGCCGCCCACGTAGGCCTCCCCGGCCTGCTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS GCA 72 bp | CCACTGGCCTTGAAGTCCGGATGGAAGCTTGGCGCTTaGCTCGCCTCGTCTTCCTTCCGCCCTGGTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: PLALKSGWKLGA*LASSSFRPGAE Trigger: CTCAGCACCAGGGCGGAAGGAAGACGAGGCGAGGCAAGCGCCAAGCTTCCATCCGGACTTCAAGGCCAGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654922.1 ENST00000656108.1 ENST00000665200.1 ENST00000666283.1 ENST00000674829.1 |
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| CDS TCA 72 bp | GGCCGTGTTGAGAAAACCAGACCCAGCCACTGGCCTTaGAGTCCGGATGGAAGCTTGGCGCTTGCCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: GRVEKTRPSHWP*SPDGSLALASP Trigger: AGGCGAGGCAAGCGCCAAGCTTCCATCCGGACTTCAAGGCCAGTGGCTGGGTCTGGTTTTCTCAACACGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000654922.1 ENST00000656108.1 ENST00000656645.1 ENST00000665200.1 ENST00000666283.1 ENST00000674829.1 ENST00000675279.1 ENST00000675949.1 |
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| CDS CCA 72 bp | GAAAACCAGACCCAGCCACTGGCCTTGAAGTCCGGATaGAAGCTTGGCGCTTGCCTCGCCTCGTCTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ENQTQPLALKSG*KLGACLASSSF Trigger: GAAGGAAGACGAGGCGAGGCAAGCGCCAAGCTTCCATCCGGACTTCAAGGCCAGTGGCTGGGTCTGGTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654922.1 ENST00000656108.1 ENST00000656645.1 ENST00000665200.1 ENST00000666283.1 ENST00000674829.1 ENST00000675279.1 |
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| CDS TCA 72 bp | AGATGCCCAAGCGGGAAGGAGACTAGGAGGCCGTGTTaGGAAAACCAGACCCAGCCACTGGCCTTGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RCPSGKETRRPC*ENQTQPLALKS Trigger: GGACTTCAAGGCCAGTGGCTGGGTCTGGTTTTCTCAACACGGCCTCCTAGTCTCCTTCCCGCTTGGGCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000340510.8 ENST00000654922.1 ENST00000656108.1 ENST00000656391.1 ENST00000656645.1 ENST00000665200.1 ENST00000666283.1 ENST00000674829.1 ENST00000675279.1 ENST00000675949.1 |
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| CDS TCA 72 bp | TCCAGCTACTTGGGAGTCTGGGGTGGGAGGATCCCTTaGGGCTGGGAAGTCTACACTACAGTGAGCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSYLGVWGGRIP*GWEVYTTVSQD Trigger: ATCTTGGCTCACTGTAGTGTAGACTTCCCAGCCTCAAGGGATCCTCCCACCCCAGACTCCCAAGTAGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000340510.8 ENST00000656391.1 ENST00000666283.1 ENST00000674829.1 ENST00000675279.1 |
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| CDS CAA 72 bp | TTCCAGCTACTTGGGAGTCTGGGGTGGGAGGATCCCTaGAGGCTGGGAAGTCTACACTACAGTGAGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: FQLLGSLGWEDP*RLGSLHYSEPR Trigger: TCTTGGCTCACTGTAGTGTAGACTTCCCAGCCTCAAGGGATCCTCCCACCCCAGACTCCCAAGTAGCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000340510.8 ENST00000656391.1 ENST00000666283.1 ENST00000674829.1 ENST00000675279.1 |
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| CDS TCA 72 bp | AGCGGAAAAAGGCAGAGGTTGCATCTGCATGCCACATaGCTCAGGCTGCATAGCCACATTCCTCTCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGKRQRLHLHAT*LRLHSHIPLKA Trigger: AGCCTTGAGAGGAATGTGGCTATGCAGCCTGAGTCATGTGGCATGCAGATGCAACCTCTGCCTTTTTCCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000340510.8 ENST00000654922.1 ENST00000656108.1 ENST00000656391.1 ENST00000656645.1 ENST00000658784.1 ENST00000665200.1 ENST00000666283.1 ENST00000668152.1 ENST00000674829.1 ENST00000675279.1 ENST00000675949.1 |
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| CDS GCA 72 bp | AATGTAGAATCAGTGGGCGTGTTAAGCTCGTTTTCCTaGAACTGGATGGTCCCACGTTTCGCTGTCACCCCT | + |
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Preference number: 6 (lower is better) Translates to: NVESVGVLSSFS*NWMVPRFAVTP Trigger: AGGGGTGACAGCGAAACGTGGGACCATCCAGTTGCAGGAAAACGAGCTTAACACGCCCACTGATTCTACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340510.8 ENST00000666283.1 |
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| CDS CCA 72 bp | GAAAATCCCTTGAGTGCAGGAGTTCAAGGTCAGCCATaGCAACATAGTGCGGCCCCATCTCTGAATAACATG | + |
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Preference number: 6 (lower is better) Translates to: ENPLSAGVQGQP*QHSAAPSLNNM Trigger: CATGTTATTCAGAGATGGGGCCGCACTATGTTGCCATGGCTGACCTTGAACTCCTGCACTCAAGGGATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656108.1 |
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| CDS CAA 90 bp | TCAGGAAGTCCAAGGTTGAGAGGGCTGCATCTGGTAGGGATCTTCTaGCTGTGTAGAGGAAGACTATCTTCCTCTACACATCATCCCACA | + |
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Preference number: 6 (lower is better) Translates to: SGSPRLRGLHLVGIF*LCRGRLSSSTHHPT Trigger: TGTGGGATGATGTGTAGAGGAAGATAGTCTTCCTCTACACAGCAAGAAGATCCCTACCAGATGCAGCCCTCTCAACCTTGGACTTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656108.1 ENST00000658784.1 ENST00000675279.1 ENST00000675949.1 |
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| CDS TCA 72 bp | TCTGGCAGCCAAATAGAGACTTCCTGCAGCAGCTCCTaGAGTGGGAAAGCTTTCAACACCACCATGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: SGSQIETSCSSS*SGKAFNTTMQF Trigger: AAATTGCATGGTGGTGTTGAAAGCTTTCCCACTTCAGGAGCTGCTGCAGGAAGTCTCTATTTGGCTGCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658784.1 ENST00000674829.1 |
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| CDS CAA 72 bp | CCAAGGTTGAGAGGGCTGCATCTGGTAGGGATCTTCTaGCTGTGTAGAGGAAGACTATCTTCCTCTACACAT | + |
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Preference number: 6 (lower is better) Translates to: PRLRGLHLVGIF*LCRGRLSSSTH Trigger: ATGTGTAGAGGAAGATAGTCTTCCTCTACACAGCAAGAAGATCCCTACCAGATGCAGCCCTCTCAACCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656108.1 ENST00000658784.1 ENST00000675279.1 ENST00000675949.1 |
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| CDS CAA 90 bp | CACCGCACCTGGCCTCAGGTATTCTTGTTTAATCCTGTCAGCAGGTaGAGTTGCCGCACTTGTGCTCCAAGTTTGATATATAAAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: HRTWPQVFLFNPVSR*SCRTCAPSLIYKGS Trigger: TGATCCTTTATATATCAAACTTGGAGCACAAGTGCGGCAACTCAACCTGCTGACAGGATTAAACAAGAATACCTGAGGCCAGGTGCGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656645.1 |
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| CDS CAA 72 bp | TCCAGCCCTTCTTGGCAGTCCAAACTGCTGTATCAGTaGTTAAGAGCACTAAATAAGGTCCTTCCCAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSPSWQSKLLYQ*LRALNKVLPKW Trigger: CCACTTGGGAAGGACCTTATTTAGTGCTCTTAACAACTGATACAGCAGTTTGGACTGCCAAGAAGGGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS CCA 72 bp | GCAACTGGATGGTCCCACGTTTCGCTGTCACCCCTCTaGAATCCACGTATAGGAAAATTCCAAATATTAGTT | + |
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Preference number: 6 (lower is better) Translates to: ATGWSHVSLSPL*NPRIGKFQILV Trigger: AACTAATATTTGGAATTTTCCTATACGTGGATTCCAGAGGGGTGACAGCGAAACGTGGGACCATCCAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340510.8 ENST00000666283.1 |
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| CDS CAA 72 bp | CAAGCATCAAAGGTAATAGTTTGGGGTGAGCTTGACTaGGTTACATTAATGATAAGGGGACTAGGGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: QASKVIVWGELD*VTLMIRGLGMG Trigger: CCCCATCCCTAGTCCCCTTATCATTAATGTAACCAAGTCAAGCTCACCCCAAACTATTACCTTTGATGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS CAA 72 bp | TGGCCTCAGGTATTCTTGTTTAATCCTGTCAGCAGGTaGAGTTGCCGCACTTGTGCTCCAAGTTTGATATAT | + |
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Preference number: 6 (lower is better) Translates to: WPQVFLFNPVSR*SCRTCAPSLIY Trigger: ATATATCAAACTTGGAGCACAAGTGCGGCAACTCAACCTGCTGACAGGATTAAACAAGAATACCTGAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656645.1 |
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| CDS GCA 72 bp | TCCCACAACAGCAGGCAGAAGGACAAGAGACTTGGATaGTACTTGGTCTTCTTAATTATTTACAGCGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SHNSRQKDKRLG*YLVFLIIYSGK Trigger: TTTTCCGCTGTAAATAATTAAGAAGACCAAGTAGCATCCAAGTCTCTTGTCCTTCTGCCTGCTGTTGTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656108.1 ENST00000675279.1 |
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| CDS CAA 72 bp | AACAGCAGGCAGAAGGACAAGAGACTTGGATGCTACTaGGTCTTCTTAATTATTTACAGCGGAAAAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: NSRQKDKRLGCY*VFLIIYSGKRQ Trigger: CTGCCTTTTTCCGCTGTAAATAATTAAGAAGACCAAGTAGCATCCAAGTCTCTTGTCCTTCTGCCTGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656108.1 ENST00000675279.1 |
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| CDS GCA 72 bp | CAGGTATTCTTGTTTAATCCTGTCAGCAGGTTGAGTTaGCGCACTTGTGCTCCAAGTTTGATATATAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: QVFLFNPVSRLS*RTCAPSLIYKG Trigger: TCCTTTATATATCAAACTTGGAGCACAAGTGCGGCAACTCAACCTGCTGACAGGATTAAACAAGAATACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656645.1 |
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| CDS CAA 72 bp | CCTGAAGTGGGAAAGCTTTCAACACCACCATGCAATTaGGAATTTCTCCAAAATTCTGTTACCTTGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: PEVGKLSTPPCN*EFLQNSVTLDA Trigger: AGCATCCAAGGTAACAGAATTTTGGAGAAATTCCAAATTGCATGGTGGTGTTGAAAGCTTTCCCACTTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658784.1 ENST00000674829.1 |
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| CDS CAA 72 bp | GGAGATCAAATAATTTATCGCTCAAACTGTGACACTTaGGAGAGTGAACGGGGCAGTATTAATGACAACAGG | + |
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Preference number: 6 (lower is better) Translates to: GDQIIYRSNCDT*ESERGSINDNR Trigger: CCTGTTGTCATTAATACTGCCCCGTTCACTCTCCAAAGTGTCACAGTTTGAGCGATAAATTATTTGATCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665200.1 |
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| CDS CAA 90 bp | TTTAATCCTGTCAGCAGGTTGAGTTGCCGCACTTGTGCTCCAAGTTaGATATATAAAGGATCAACATCTTGGATGCTACTTGGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FNPVSRLSCRTCAPS*IYKGSTSWMLLGLL Trigger: AAGAAGACCAAGTAGCATCCAAGATGTTGATCCTTTATATATCAAACTTGGAGCACAAGTGCGGCAACTCAACCTGCTGACAGGATTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656645.1 |
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| CDS GCA 72 bp | TCATCAAACATTGAACCAACTTCGGCAGAGAAGATCTaGTCTAAGAGGACAAGATTTCCAGTTCATACTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSNIEPTSAEKI*SKRTRFPVHTE Trigger: TTCAGTATGAACTGGAAATCTTGTCCTCTTAGAGCAGATCTTCTCTGCCGAAGTTGGTTCAATGTTTGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS CCA 72 bp | CAGGGTATAACAAGGCAAGCATCAAAGGTAATAGTTTaGGGTGAGCTTGACTTGGTTACATTAATGATAAGG | + |
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Preference number: 6 (lower is better) Translates to: QGITRQASKVIV*GELDLVTLMIR Trigger: CCTTATCATTAATGTAACCAAGTCAAGCTCACCCCAAACTATTACCTTTGATGCTTGCCTTGTTATACCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS CAA 72 bp | GTGGTCCATTCTTGCTCTTTAGTATTTCATCAAACATaGAACCAACTTCGGCAGAGAAGATCTGCTCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: VVHSCSLVFHQT*NQLRQRRSALR Trigger: TCTTAGAGCAGATCTTCTCTGCCGAAGTTGGTTCAATGTTTGATGAAATACTAAAGAGCAAGAATGGACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654922.1 |
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| CDS CAA 72 bp | ACACAAAAGACACCAATAAATGTCATTGCCCTGCTTTaGGTGTATCCAAGGAACTTAATTTCAGAATTTGGG | + |
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Preference number: 6 (lower is better) Translates to: TQKTPINVIALL*VYPRNLISEFG Trigger: CCCAAATTCTGAAATTAAGTTCCTTGGATACACCAAAAGCAGGGCAATGACATTTATTGGTGTCTTTTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656645.1 |
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| CDS CAA 90 bp | TTAACTGACACACAAAAGACACCAATAAATGTCATTGCCCTGCTTTaGGTGTATCCAAGGAACTTAATTTCAGAATTTGGGTTTCAGATA | + |
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Preference number: 6 (lower is better) Translates to: LTDTQKTPINVIALL*VYPRNLISEFGFQI Trigger: TATCTGAAACCCAAATTCTGAAATTAAGTTCCTTGGATACACCAAAAGCAGGGCAATGACATTTATTGGTGTCTTTTGTGTGTCAGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656645.1 |
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