Pregenerated sensors for LINC00261 (Homo sapiens)
Ensembl gene IDs: ENSG00000259974Ensembl transcript IDs: ENST00000420070.1, ENST00000564492.1, ENST00000609300.1, ENST00000638550.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCAGGGATTCCTGCGGCGGCCGGCGGGCCGGCTGGCGGGCGGGCTaGGGAGCGTCCAGCTCGCGGAGGGAGGAGGCCGACTGCTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: SRDSCGGRRAGWRAG*GASSSRREEADCSE Trigger: CTCGGAGCAGTCGGCCTCCTCCCTCCGCGAGCTGGACGCTCCGCAGCCCGCCCGCCAGCCGGCCCGCCGGCCGCCGCAGGAATCCCTGGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 90 bp | CTGTTTTCTCAGCGATGGTTGAGCTGGTCTTTATCCAGGGATTCCTaGGGCGGCCGGCGGGCCGGCTGGCGGGCGGGCTGCGGAGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: LFSQRWLSWSLSRDS*GGRRAGWRAGCGAS Trigger: GGACGCTCCGCAGCCCGCCCGCCAGCCGGCCCGCCGGCCGCCGCAGGAATCCCTGGATAAAGACCAGCTCAACCATCGCTGAGAAAACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS GCA 90 bp | CGGGCGGGCTGCGGAGCGTCCAGCTCGCGGAGGGAGGAGGCCGACTaGTCCGAGCCGAGGCATCCCCGCATTTATTTGAGCTCAAACCAA | + |
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Preference number: 5 (lower is better) Translates to: RAGCGASSSRREEAD*SEPRHPRIYLSSNQ Trigger: TTGGTTTGAGCTCAAATAAATGCGGGGATGCCTCGGCTCGGAGCAGTCGGCCTCCTCCCTCCGCGAGCTGGACGCTCCGCAGCCCGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 90 bp | TCTGCTGTGGGCACAGGCATGTCGGATATGATTTCCCTGCAGGGATaGCCTCTCGGTGGCTGTGGGGGATGCTTGCGGCCCCTCGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SAVGTGMSDMISLQG*PLGGCGGCLRPLAC Trigger: GCAGGCGAGGGGCCGCAAGCATCCCCCACAGCCACCGAGAGGGCATCCCTGCAGGGAAATCATATCCGACATGCCTGTGCCCACAGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000420070.1 ENST00000564492.1 ENST00000609300.1 |
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| CDS GCA 90 bp | AGGTGCTCTCTTCTCTGGCGGCGGCGGCACGTGAGGTCGGCTCCTTaGAGAACAGCGTCTCAGTGGGAGACCTTTAGCTTCACGGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: RCSLLWRRRHVRSAP*RTASQWETFSFTAF Trigger: AAAGGCCGTGAAGCTAAAGGTCTCCCACTGAGACGCTGTTCTGCAAGGAGCCGACCTCACGTGCCGCCGCCGCCAGAGAAGAGAGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000609300.1 |
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| CDS GCA 90 bp | GTGCCCTGTTGTGTTCAGGGCTCTTCGAGGAAAGTACACCCACTCTaGCCTCCCAGGGTGGGCTCACCTTGGTTGCTGTTCACTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VPCCVQGSSRKVHPL*PPRVGSPWLLFTFL Trigger: CAGGAAAGTGAACAGCAACCAAGGTGAGCCCACCCTGGGAGGGCAGAGTGGGTGTACTTTCCTCGAAGAGCCCTGAACACAACAGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 90 bp | TTAGAGGCAGTCTTAAGTCTGCTGTGGGCACAGGCATGTCGGATATaGTTTCCCTGCAGGGATGCCCTCTCGGTGGCTGTGGGGGATGCT | + |
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Preference number: 5 (lower is better) Translates to: LEAVLSLLWAQACRI*FPCRDALSVAVGDA Trigger: AGCATCCCCCACAGCCACCGAGAGGGCATCCCTGCAGGGAAATCATATCCGACATGCCTGTGCCCACAGCAGACTTAAGACTGCCTCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000420070.1 ENST00000564492.1 ENST00000609300.1 |
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| CDS GCA 90 bp | GAATGTTCTGGTGGACAGCAGCCACCGCAAAGTCTGGGCCCATCCTaGTTCTTTCCCAGTCGTGGTTTGCAGCTAGCCTTCGGGAATCAG | + |
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Preference number: 5 (lower is better) Translates to: ECSGGQQPPQSLGPS*FFPSRGLQLAFGNQ Trigger: CTGATTCCCGAAGGCTAGCTGCAAACCACGACTGGGAAAGAAGCAGGATGGGCCCAGACTTTGCGGTGGCTGCTGTCCACCAGAACATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420070.1 |
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| CDS GCA 90 bp | AGTGTCCAGGAGCAATCTGATGCAGTGTCATGGCCTTTGGGGAAATaGTTGGGAGGGTCAAAGCTCAGCCTGGGGAGAAGCTCATGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SVQEQSDAVSWPLGK*LGGSKLSLGRSSCA Trigger: AGCACATGAGCTTCTCCCCAGGCTGAGCTTTGACCCTCCCAAGCATTTCCCCAAAGGCCATGACACTGCATCAGATTGCTCCTGGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 90 bp | GGCCTCAGAACCATCTTCTCAGGCTGGAACAGTGCTCCACCCACATaGAGAATCCTGACACAGTGGAACGCAGCCCATGTTGATGAAATA | + |
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Preference number: 5 (lower is better) Translates to: GLRTIFSGWNSAPPT*RILTQWNAAHVDEI Trigger: TATTTCATCAACATGGGCTGCGTTCCACTGTGTCAGGATTCTGCATGTGGGTGGAGCACTGTTCCAGCCTGAGAAGATGGTTCTGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS GCA 90 bp | CTGGGCTCTGTATTCACACACAGCACCCATTTGGACTGGGACCATTaGCTCTTGATTAGCAAATCTGGTGCTGTGCTCCACTCCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LGSVFTHSTHLDWDH*LLISKSGAVLHSSV Trigger: AACTGAGGAGTGGAGCACAGCACCAGATTTGCTAATCAAGAGGCAATGGTCCCAGTCCAAATGGGTGCTGTGTGTGAATACAGAGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 90 bp | AAGGGACAGTGGACGCATGGGAAAACCACTACCCCAGCATTGTGGTaGCCTTCTGCTGAGCAAATAGTTCAAACTGTTCATTCCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: KGQWTHGKTTTPALW*PSAEQIVQTVHSHL Trigger: AAGATGGGAATGAACAGTTTGAACTATTTGCTCAGCAGAAGGGCACCACAATGCTGGGGTAGTGGTTTTCCCATGCGTCCACTGTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 90 bp | ATATCCACCTATGTCACAGGGTGTGCACGGCGGATATCTTTGTCCTaGCTCAGAAAGAGTTATAGAAGCCCTGTGTGCAACCTACAAGTG | + |
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Preference number: 5 (lower is better) Translates to: ISTYVTGCARRISLS*LRKSYRSPVCNLQV Trigger: CACTTGTAGGTTGCACACAGGGCTTCTATAACTCTTTCTGAGTCAGGACAAAGATATCCGCCGTGCACACCCTGTGACATAGGTGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 90 bp | GACGCATGGGAAAACCACTACCCCAGCATTGTGGTGCCCTTCTGCTaGGCAAATAGTTCAAACTGTTCATTCCCATCTTCTATTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: DAWENHYPSIVVPFC*ANSSNCSFPSSILS Trigger: GGAGAGAATAGAAGATGGGAATGAACAGTTTGAACTATTTGCTCAGCAGAAGGGCACCACAATGCTGGGGTAGTGGTTTTCCCATGCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 90 bp | TCGGCTCCAAGCTGTCAAAGATCTGGAGAGTTTATGTCAGTGTCCTaGATTAATTGCTTTAAGCTGGAGCAAGCTCCACGGGCTACCAAA | + |
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Preference number: 5 (lower is better) Translates to: SAPSCQRSGEFMSVS*INCFKLEQAPRATK Trigger: TTTGGTAGCCCGTGGAGCTTGCTCCAGCTTAAAGCAATTAATTCAGGACACTGACATAAACTCTCCAGATCTTTGACAGCTTGGAGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 90 bp | CTTGTGAAGCACACAGTCCTCAAAAGGGAAGGAGAGATGGTTCCATaGACTTTAGGGTTGACATTTATTACTTTAAACAGGTTGGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LVKHTVLKREGEMVP*TLGLTFITLNRLGS Trigger: GGAACCCAACCTGTTTAAAGTAATAAATGTCAACCCTAAAGTGCATGGAACCATCTCTCCTTCCCTTTTGAGGACTGTGTGCTTCACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 90 bp | CATGACAGAAATGATGCCTTGAATGGCTACAGCTTTCAGCCTTGGTaGGCCCCAGCCTTATTTGATCCATATTTTAATTACTCTGTGATT | + |
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Preference number: 5 (lower is better) Translates to: HDRNDALNGYSFQPW*APALFDPYFNYSVI Trigger: AATCACAGAGTAATTAAAATATGGATCAAATAAGGCTGGGGCTCACCAAGGCTGAAAGCTGTAGCCATTCAAGGCATCATTTCTGTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS TCA 90 bp | AAAGTACCTTGTATGTCCCATCTCCAGTTCATCCTGCTTTTACCCTaGGTCCAGCAACCTCTATTCATTAGGATTCTGAACAAAATAAGC | + |
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Preference number: 5 (lower is better) Translates to: KVPCMSHLQFILLLP*VQQPLFIRILNKIS Trigger: GCTTATTTTGTTCAGAATCCTAATGAATAGAGGTTGCTGGACTCAGGGTAAAAGCAGGATGAACTGGAGATGGGACATACAAGGTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 90 bp | ATAAATTGTTGTGTCAAGGAAAAAGTGAGACGTAGCAGTGTATCTTaGGTGTGGACTCCTTTGCTGGAAATATTGATCCTGCAAATGAAC | + |
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Preference number: 5 (lower is better) Translates to: INCCVKEKVRRSSVS*VWTPLLEILILQMN Trigger: GTTCATTTGCAGGATCAATATTTCCAGCAAAGGAGTCCACACTCAAGATACACTGCTACGTCTCACTTTTTCCTTGACACAACAATTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | TTATCCAGGGATTCCTGCGGCGGCCGGCGGGCCGGCTaGCGGGCGGGCTGCGGAGCGTCCAGCTCGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LSRDSCGGRRAG*RAGCGASSSRR Trigger: CCTCCGCGAGCTGGACGCTCCGCAGCCCGCCCGCCAGCCGGCCCGCCGGCCGCCGCAGGAATCCCTGGATAA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS GCA 72 bp | CAGCGATGGTTGAGCTGGTCTTTATCCAGGGATTCCTaGGGCGGCCGGCGGGCCGGCTGGCGGGCGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QRWLSWSLSRDS*GGRRAGWRAGC Trigger: GCAGCCCGCCCGCCAGCCGGCCCGCCGGCCGCCGCAGGAATCCCTGGATAAAGACCAGCTCAACCATCGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS GCA 72 bp | TGCGGAGCGTCCAGCTCGCGGAGGGAGGAGGCCGACTaGTCCGAGCCGAGGCATCCCCGCATTTATTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: CGASSSRREEAD*SEPRHPRIYLS Trigger: GCTCAAATAAATGCGGGGATGCCTCGGCTCGGAGCAGTCGGCCTCCTCCCTCCGCGAGCTGGACGCTCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | TATGATTTCCCTGCAGGGATGCCCTCTCGGTGGCTGTaGGGGATGCTTGCGGCCCCTCGCCTGCCAGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: YDFPAGMPSRWL*GMLAAPRLPAL Trigger: CAGCGCTGGCAGGCGAGGGGCCGCAAGCATCCCCCACAGCCACCGAGAGGGCATCCCTGCAGGGAAATCATA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000609300.1 |
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| CDS CCA 72 bp | GTCGGATATGATTTCCCTGCAGGGATGCCCTCTCGGTaGCTGTGGGGGATGCTTGCGGCCCCTCGCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: VGYDFPAGMPSR*LWGMLAAPRLP Trigger: TGGCAGGCGAGGGGCCGCAAGCATCCCCCACAGCCACCGAGAGGGCATCCCTGCAGGGAAATCATATCCGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000609300.1 |
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| CDS GCA 72 bp | GGCACAGGCATGTCGGATATGATTTCCCTGCAGGGATaGCCTCTCGGTGGCTGTGGGGGATGCTTGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GTGMSDMISLQG*PLGGCGGCLRP Trigger: GGGCCGCAAGCATCCCCCACAGCCACCGAGAGGGCATCCCTGCAGGGAAATCATATCCGACATGCCTGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000420070.1 ENST00000564492.1 ENST00000609300.1 |
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| CDS CAA 90 bp | GGGTTAACCGCCCTGGGAAGCCTAGGTCTGTTTTCTCAGCGATGGTaGAGCTGGTCTTTATCCAGGGATTCCTGCGGCGGCCGGCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLTALGSLGLFSQRW*SWSLSRDSCGGRRA Trigger: GGCCCGCCGGCCGCCGCAGGAATCCCTGGATAAAGACCAGCTCAACCATCGCTGAGAAAACAGACCTAGGCTTCCCAGGGCGGTTAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS GCA 72 bp | CTTCTCTGGCGGCGGCGGCACGTGAGGTCGGCTCCTTaGAGAACAGCGTCTCAGTGGGAGACCTTTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLWRRRHVRSAP*RTASQWETFSF Trigger: GAAGCTAAAGGTCTCCCACTGAGACGCTGTTCTGCAAGGAGCCGACCTCACGTGCCGCCGCCGCCAGAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000609300.1 |
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| CDS CCA 72 bp | GGAAGCCTAGGTCTGTTTTCTCAGCGATGGTTGAGCTaGTCTTTATCCAGGGATTCCTGCGGCGGCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GSLGLFSQRWLS*SLSRDSCGGRR Trigger: CCGCCGGCCGCCGCAGGAATCCCTGGATAAAGACCAGCTCAACCATCGCTGAGAAAACAGACCTAGGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS GCA 72 bp | TGTGTTCAGGGCTCTTCGAGGAAAGTACACCCACTCTaGCCTCCCAGGGTGGGCTCACCTTGGTTGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: CVQGSSRKVHPL*PPRVGSPWLLF Trigger: GAACAGCAACCAAGGTGAGCCCACCCTGGGAGGGCAGAGTGGGTGTACTTTCCTCGAAGAGCCCTGAACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | GCCCTGGGAAGCCTAGGTCTGTTTTCTCAGCGATGGTaGAGCTGGTCTTTATCCAGGGATTCCTGCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: ALGSLGLFSQRW*SWSLSRDSCGG Trigger: GCCGCCGCAGGAATCCCTGGATAAAGACCAGCTCAACCATCGCTGAGAAAACAGACCTAGGCTTCCCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS CAA 72 bp | ATCTGTGTGCCCTGGTGGGCAGATGGTGGGGCATTGTaGAGGGTGCTGTGGCTGTTTGTGTGCCCTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ICVPWWADGGAL*RVLWLFVCPVV Trigger: CACAACAGGGCACACAAACAGCCACAGCACCCTCAACAATGCCCCACCATCTGCCCACCAGGGCACACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 72 bp | GTCTTAAGTCTGCTGTGGGCACAGGCATGTCGGATATaGTTTCCCTGCAGGGATGCCCTCTCGGTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VLSLLWAQACRI*FPCRDALSVAV Trigger: CACAGCCACCGAGAGGGCATCCCTGCAGGGAAATCATATCCGACATGCCTGTGCCCACAGCAGACTTAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000420070.1 ENST00000564492.1 ENST00000609300.1 |
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| CDS GCA 72 bp | ATGGCTCCAAGCTGTCTCTGGGTGGTGGCTTTTCTATaGTGCCACCCTCTCACCCCTGGCCTCTTAATGCTC | + |
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Preference number: 6 (lower is better) Translates to: MAPSCLWVVAFL*CHPLTPGLLML Trigger: GAGCATTAAGAGGCCAGGGGTGAGAGGGTGGCAGCATAGAAAAGCCACCACCCAGAGACAGCTTGGAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | CTGAATGTTCTGGTGGACAGCAGCCACCGCAAAGTCTaGGCCCATCCTGCTTCTTTCCCAGTCGTGGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LNVLVDSSHRKV*AHPASFPVVVC Trigger: GCAAACCACGACTGGGAAAGAAGCAGGATGGGCCCAGACTTTGCGGTGGCTGCTGTCCACCAGAACATTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420070.1 |
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| CDS CCA 72 bp | ACCGCCCTGGGAAGCCTAGGTCTGTTTTCTCAGCGATaGTTGAGCTGGTCTTTATCCAGGGATTCCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: TALGSLGLFSQR*LSWSLSRDSCG Trigger: GCCGCAGGAATCCCTGGATAAAGACCAGCTCAACCATCGCTGAGAAAACAGACCTAGGCTTCCCAGGGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS CCA 72 bp | CACGTGAGGTCGGCTCCTTGCAGAACAGCGTCTCAGTaGGAGACCTTTAGCTTCACGGCCTTTCCTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HVRSAPCRTASQ*ETFSFTAFPSD Trigger: GTCAGAAGGAAAGGCCGTGAAGCTAAAGGTCTCCCACTGAGACGCTGTTCTGCAAGGAGCCGACCTCACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000609300.1 |
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| CDS GCA 72 bp | GAGCAATCTGATGCAGTGTCATGGCCTTTGGGGAAATaGTTGGGAGGGTCAAAGCTCAGCCTGGGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: EQSDAVSWPLGK*LGGSKLSLGRS Trigger: GCTTCTCCCCAGGCTGAGCTTTGACCCTCCCAAGCATTTCCCCAAAGGCCATGACACTGCATCAGATTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | GCAAAGTCTGGGCCCATCCTGCTTCTTTCCCAGTCGTaGTTTGCAGCTAGCCTTCGGGAATCAGTTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: AKSGPILLLSQS*FAASLRESVPS Trigger: ACTGGGAACTGATTCCCGAAGGCTAGCTGCAAACCACGACTGGGAAAGAAGCAGGATGGGCCCAGACTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420070.1 |
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| CDS CCA 72 bp | CTTCGAGGAAAGTACACCCACTCTGCCCTCCCAGGGTaGGCTCACCTTGGTTGCTGTTCACTTTCCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: LRGKYTHSALPG*AHLGCCSLSCK Trigger: CTTACAGGAAAGTGAACAGCAACCAAGGTGAGCCCACCCTGGGAGGGCAGAGTGGGTGTACTTTCCTCGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | AGTCTGGGCCCATCCTGCTTCTTTCCCAGTCGTGGTTaGCAGCTAGCCTTCGGGAATCAGTTCCCAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: SLGPSCFFPSRG*QLAFGNQFPVI Trigger: GATGACTGGGAACTGATTCCCGAAGGCTAGCTGCAAACCACGACTGGGAAAGAAGCAGGATGGGCCCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420070.1 |
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| CDS CAA 90 bp | CCACCGCAAAGTCTGGGCCCATCCTGCTTCTTTCCCAGTCGTGGTTaGCAGCTAGCCTTCGGGAATCAGTTCCCAGTCATCACACATACT | + |
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Preference number: 6 (lower is better) Translates to: PPQSLGPSCFFPSRG*QLAFGNQFPVITHT Trigger: AGTATGTGTGATGACTGGGAACTGATTCCCGAAGGCTAGCTGCAAACCACGACTGGGAAAGAAGCAGGATGGGCCCAGACTTTGCGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420070.1 |
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| CDS CAA 90 bp | TCTGAGGAAAGTGTCCAGGAGCAATCTGATGCAGTGTCATGGCCTTaGGGGAAATGCTTGGGAGGGTCAAAGCTCAGCCTGGGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SEESVQEQSDAVSWP*GKCLGGSKLSLGRS Trigger: GCTTCTCCCCAGGCTGAGCTTTGACCCTCCCAAGCATTTCCCCAAAGGCCATGACACTGCATCAGATTGCTCCTGGACACTTTCCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | ACCATCTTCTCAGGCTGGAACAGTGCTCCACCCACATaGAGAATCCTGACACAGTGGAACGCAGCCCATGTT | + |
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Preference number: 6 (lower is better) Translates to: TIFSGWNSAPPT*RILTQWNAAHV Trigger: AACATGGGCTGCGTTCCACTGTGTCAGGATTCTGCATGTGGGTGGAGCACTGTTCCAGCCTGAGAAGATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS CCA 72 bp | AACATTTCCTCCAGGATCATGGCTCCAAGCTGTCTCTaGGTGGTGGCTTTTCTATGCTGCCACCCTCTCACC | + |
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Preference number: 6 (lower is better) Translates to: NISSRIMAPSCL*VVAFLCCHPLT Trigger: GGTGAGAGGGTGGCAGCATAGAAAAGCCACCACCCAGAGACAGCTTGGAGCCATGATCCTGGAGGAAATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | AGTGTCCAGGAGCAATCTGATGCAGTGTCATGGCCTTaGGGGAAATGCTTGGGAGGGTCAAAGCTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SVQEQSDAVSWP*GKCLGGSKLSL Trigger: CAGGCTGAGCTTTGACCCTCCCAAGCATTTCCCCAAAGGCCATGACACTGCATCAGATTGCTCCTGGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 72 bp | CACACAGCACCCATTTGGACTGGGACCATTGCCTCTTaGTTAGCAAATCTGGTGCTGTGCTCCACTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HTAPIWTGTIAS*LANLVLCSTPQ Trigger: CTGAGGAGTGGAGCACAGCACCAGATTTGCTAATCAAGAGGCAATGGTCCCAGTCCAAATGGGTGCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | AATCTGATGCAGTGTCATGGCCTTTGGGGAAATGCTTaGGAGGGTCAAAGCTCAGCCTGGGGAGAAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: NLMQCHGLWGNA*EGQSSAWGEAH Trigger: ATGAGCTTCTCCCCAGGCTGAGCTTTGACCCTCCCAAGCATTTCCCCAAAGGCCATGACACTGCATCAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | CTTTGGGGAAATGCTTGGGAGGGTCAAAGCTCAGCCTaGGGAGAAGCTCATGTGCTTTTAGTCACAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LWGNAWEGQSSA*GEAHVLLVTED Trigger: GTCTTCTGTGACTAAAAGCACATGAGCTTCTCCCCAGGCTGAGCTTTGACCCTCCCAAGCATTTCCCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | GGACAGTGGACGCATGGGAAAACCACTACCCCAGCATaGTGGTGCCCTTCTGCTGAGCAAATAGTTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: GQWTHGKTTTPA*WCPSAEQIVQT Trigger: AGTTTGAACTATTTGCTCAGCAGAAGGGCACCACAATGCTGGGGTAGTGGTTTTCCCATGCGTCCACTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 90 bp | CCAAAGAAGGGACAGTGGACGCATGGGAAAACCACTACCCCAGCATaGTGGTGCCCTTCTGCTGAGCAAATAGTTCAAACTGTTCATTCC | + |
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Preference number: 6 (lower is better) Translates to: PKKGQWTHGKTTTPA*WCPSAEQIVQTVHS Trigger: GGAATGAACAGTTTGAACTATTTGCTCAGCAGAAGGGCACCACAATGCTGGGGTAGTGGTTTTCCCATGCGTCCACTGTCCCTTCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | GTATTCACACACAGCACCCATTTGGACTGGGACCATTaGCTCTTGATTAGCAAATCTGGTGCTGTGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VFTHSTHLDWDH*LLISKSGAVLH Trigger: GTGGAGCACAGCACCAGATTTGCTAATCAAGAGGCAATGGTCCCAGTCCAAATGGGTGCTGTGTGTGAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | GAGAAACCTGCTCATGCTGGAAAATGTCTTGCTAAGTaGCCTCAGAACCATCTTCTCAGGCTGGAACAGTGC | + |
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Preference number: 6 (lower is better) Translates to: EKPAHAGKCLAK*PQNHLLRLEQC Trigger: GCACTGTTCCAGCCTGAGAAGATGGTTCTGAGGCCACTTAGCAAGACATTTTCCAGCATGAGCAGGTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS CCA 72 bp | CTGGGCTCTGTATTCACACACAGCACCCATTTGGACTaGGACCATTGCCTCTTGATTAGCAAATCTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LGSVFTHSTHLD*DHCLLISKSGA Trigger: AGCACCAGATTTGCTAATCAAGAGGCAATGGTCCCAGTCCAAATGGGTGCTGTGTGTGAATACAGAGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | CAATTCCTGATGTTCACAGACCTCCTTCCCTTCTCCTaGGCTCTGTATTCACACACAGCACCCATTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: QFLMFTDLLPFS*ALYSHTAPIWT Trigger: AGTCCAAATGGGTGCTGTGTGTGAATACAGAGCCCAGGAGAAGGGAAGGAGGTCTGTGAACATCAGGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | CAGTGGACGCATGGGAAAACCACTACCCCAGCATTGTaGTGCCCTTCTGCTGAGCAAATAGTTCAAACTGTT | + |
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Preference number: 6 (lower is better) Translates to: QWTHGKTTTPAL*CPSAEQIVQTV Trigger: AACAGTTTGAACTATTTGCTCAGCAGAAGGGCACCACAATGCTGGGGTAGTGGTTTTCCCATGCGTCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 90 bp | CCTGGTACATTGTTTGTGCCCTTGCATTTCATTCTGCAAGGAAGGTaGCTCTCTGGGCCTATAAGCAAACAGTCCAGAAAAGGGCTAGCC | + |
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Preference number: 6 (lower is better) Translates to: PGTLFVPLHFILQGR*LSGPISKQSRKGLA Trigger: GGCTAGCCCTTTTCTGGACTGTTTGCTTATAGGCCCAGAGAGCAACCTTCCTTGCAGAATGAAATGCAAGGGCACAAACAATGTACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 72 bp | TATGTCACAGGGTGTGCACGGCGGATATCTTTGTCCTaGCTCAGAAAGAGTTATAGAAGCCCTGTGTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: YVTGCARRISLS*LRKSYRSPVCN Trigger: GTTGCACACAGGGCTTCTATAACTCTTTCTGAGTCAGGACAAAGATATCCGCCGTGCACACCCTGTGACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | GACGATATCAGGTCTTTTGCCCTAGTTTACCCAGAGTaGAGTCTGGGTCAATGTTTCTCCCAACCAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: DDIRSFALVYPE*SLGQCFSQPKL Trigger: GAGCTTTGGTTGGGAGAAACATTGACCCAGACTGCACTCTGGGTAAACTAGGGCAAAAGACCTGATATCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | TGGACGCATGGGAAAACCACTACCCCAGCATTGTGGTaGCCTTCTGCTGAGCAAATAGTTCAAACTGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: WTHGKTTTPALW*PSAEQIVQTVH Trigger: ATGAACAGTTTGAACTATTTGCTCAGCAGAAGGGCACCACAATGCTGGGGTAGTGGTTTTCCCATGCGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | AGTACGGCCTACTTGTTATCTGCAATGCTGCAGCTGTaGTTTTATCTGGCCAAAGGAGACAGGGGACAACAA | + |
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Preference number: 6 (lower is better) Translates to: STAYLLSAMLQL*FYLAKGDRGQQ Trigger: TTGTTGTCCCCTGTCTCCTTTGGCCAGATAAAAGCACAGCTGCAGCATTGCAGATAACAAGTAGGCCGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | CTTCTCCTGGGCTCTGTATTCACACACAGCACCCATTaGGACTGGGACCATTGCCTCTTGATTAGCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LLLGSVFTHSTH*DWDHCLLISKS Trigger: AGATTTGCTAATCAAGAGGCAATGGTCCCAGTCCAAATGGGTGCTGTGTGTGAATACAGAGCCCAGGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | CGGGATGAAATAAATATCCACCTATGTCACAGGGTGTaGACGGCGGATATCTTTGTCCTGACTCAGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RDEINIHLCHRV*TADIFVLTQKE Trigger: CTCTTTCTGAGTCAGGACAAAGATATCCGCCGTGCACACCCTGTGACATAGGTGGATATTTATTTCATCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | AATACGTGTGGCTGCTGCATTTGGGTCTACAGTCCTTaGTCCTATAGCTGTCAGCAGAGGTGCTATATTAGT | + |
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Preference number: 6 (lower is better) Translates to: NTCGCCIWVYSP*SYSCQQRCYIS Trigger: ACTAATATAGCACCTCTGCTGACAGCTATAGGACCAAGGACTGTAGACCCAAATGCAGCAGCCACACGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420070.1 |
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| CDS CAA 90 bp | TTCATTCCCATCTTCTATTCTCTCCCTGGTACATTGTTTGTGCCCTaGCATTTCATTCTGCAAGGAAGGTTGCTCTCTGGGCCTATAAGC | + |
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Preference number: 6 (lower is better) Translates to: FIPIFYSLPGTLFVP*HFILQGRLLSGPIS Trigger: GCTTATAGGCCCAGAGAGCAACCTTCCTTGCAGAATGAAATGCAAGGGCACAAACAATGTACCAGGGAGAGAATAGAAGATGGGAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 90 bp | TCAAACTGTTCATTCCCATCTTCTATTCTCTCCCTGGTACATTGTTaGTGCCCTTGCATTTCATTCTGCAAGGAAGGTTGCTCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SNCSFPSSILSLVHC*CPCISFCKEGCSLG Trigger: GCCCAGAGAGCAACCTTCCTTGCAGAATGAAATGCAAGGGCACAAACAATGTACCAGGGAGAGAATAGAAGATGGGAATGAACAGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 72 bp | GAAAACCACTACCCCAGCATTGTGGTGCCCTTCTGCTaGGCAAATAGTTCAAACTGTTCATTCCCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ENHYPSIVVPFC*ANSSNCSFPSS Trigger: AGAAGATGGGAATGAACAGTTTGAACTATTTGCTCAGCAGAAGGGCACCACAATGCTGGGGTAGTGGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | ATCTTCTATTCTCTCCCTGGTACATTGTTTGTGCCCTaGCATTTCATTCTGCAAGGAAGGTTGCTCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: IFYSLPGTLFVP*HFILQGRLLSG Trigger: CCCAGAGAGCAACCTTCCTTGCAGAATGAAATGCAAGGGCACAAACAATGTACCAGGGAGAGAATAGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 72 bp | TGTATGTCCCATCTCCAGTTCATCCTGCTTTTACCCTaGGTCCAGCAACCTCTATTCATTAGGATTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: CMSHLQFILLLP*VQQPLFIRILN Trigger: GTTCAGAATCCTAATGAATAGAGGTTGCTGGACTCAGGGTAAAAGCAGGATGAACTGGAGATGGGACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | TTGTTTGTGCCCTTGCATTTCATTCTGCAAGGAAGGTaGCTCTCTGGGCCTATAAGCAAACAGTCCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LFVPLHFILQGR*LSGPISKQSRK Trigger: TTTTCTGGACTGTTTGCTTATAGGCCCAGAGAGCAACCTTCCTTGCAGAATGAAATGCAAGGGCACAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | TCATTCCCATCTTCTATTCTCTCCCTGGTACATTGTTaGTGCCCTTGCATTTCATTCTGCAAGGAAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SFPSSILSLVHC*CPCISFCKEGC Trigger: GCAACCTTCCTTGCAGAATGAAATGCAAGGGCACAAACAATGTACCAGGGAGAGAATAGAAGATGGGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 72 bp | TGTGTCAAGGAAAAAGTGAGACGTAGCAGTGTATCTTaGGTGTGGACTCCTTTGCTGGAAATATTGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: CVKEKVRRSSVS*VWTPLLEILIL Trigger: CAGGATCAATATTTCCAGCAAAGGAGTCCACACTCAAGATACACTGCTACGTCTCACTTTTTCCTTGACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | CAAAAGTACCTTGTATGTCCCATCTCCAGTTCATCCTaGTTTTACCCTGAGTCCAGCAACCTCTATTCATTA | + |
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Preference number: 6 (lower is better) Translates to: QKYLVCPISSSS*FYPESSNLYSL Trigger: TAATGAATAGAGGTTGCTGGACTCAGGGTAAAAGCAGGATGAACTGGAGATGGGACATACAAGGTACTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | AGTTTATGTCAGTGTCCTGAATTAATTGCTTTAAGCTaGAGCAAGCTCCACGGGCTACCAAATGTCCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: SLCQCPELIALS*SKLHGLPNVQK Trigger: CTTTTGGACATTTGGTAGCCCGTGGAGCTTGCTCCAGCTTAAAGCAATTAATTCAGGACACTGACATAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 72 bp | AATGATGCCTTGAATGGCTACAGCTTTCAGCCTTGGTaGGCCCCAGCCTTATTTGATCCATATTTTAATTAC | + |
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Preference number: 6 (lower is better) Translates to: NDALNGYSFQPW*APALFDPYFNY Trigger: GTAATTAAAATATGGATCAAATAAGGCTGGGGCTCACCAAGGCTGAAAGCTGTAGCCATTCAAGGCATCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000638550.2 |
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| CDS TCA 72 bp | AGGCATGGGACCATCTTTCACCCCAAACAATCACTCTaGGTTTGTGAATATTTTCCGGTCATAGAAAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: RHGTIFHPKQSL*VCEYFPVIERD Trigger: ATCTCTTTCTATGACCGGAAAATATTCACAAACTCAGAGTGATTGTTTGGGGTGAAAGATGGTCCCATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | CACACAGTCCTCAAAAGGGAAGGAGAGATGGTTCCATaGACTTTAGGGTTGACATTTATTACTTTAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: HTVLKREGEMVP*TLGLTFITLNR Trigger: CCTGTTTAAAGTAATAAATGTCAACCCTAAAGTGCATGGAACCATCTCTCCTTCCCTTTTGAGGACTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS GCA 72 bp | CACAAACACACACGCACACACATACACCTATACACATaGATCCTTTTAACCAAAGGTAATACTCACTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: HKHTRTHIHLYT*ILLTKGNTHWC Trigger: ACACCAGTGAGTATTACCTTTGGTTAAAAGGATGCATGTGTATAGGTGTATGTGTGTGCGTGTGTGTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | AAAAGATGTTTATTAATAACATTTCCTCCAGGATCATaGCTCCAAGCTGTCTCTGGGTGGTGGCTTTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: KRCLLITFPPGS*LQAVSGWWLFY Trigger: ATAGAAAAGCCACCACCCAGAGACAGCTTGGAGCCATGATCCTGGAGGAAATGTTATTAATAAACATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | TGCACTTTAGGGTTGACATTTATTACTTTAAACAGGTaGGGTTCCATTCCTTGTATGCCTTTCTTTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CTLGLTFITLNR*GSIPCMPFFAP Trigger: TGGAGCAAAGAAAGGCATACAAGGAATGGAACCCAACCTGTTTAAAGTAATAAATGTCAACCCTAAAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | ATTATAGGTGTAATCTATGGCAATTCCAAAAGTACCTaGTATGTCCCATCTCCAGTTCATCCTGCTTTTACC | + |
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Preference number: 6 (lower is better) Translates to: IIGVIYGNSKST*YVPSPVHPAFT Trigger: GGTAAAAGCAGGATGAACTGGAGATGGGACATACAAGGTACTTTTGGAATTGCCATAGATTACACCTATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 90 bp | TTAGGGCAGGACAACTCCACACTTGTATATTTTAGGATCTTTGCATaGACAAATGTTAATGGCTGTTGGTCTATTGGTTCAGCAAGATTT | + |
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Preference number: 6 (lower is better) Translates to: LGQDNSTLVYFRIFA*TNVNGCWSIGSARF Trigger: AAATCTTGCTGAACCAATAGACCAACAGCCATTAACATTTGTCAATGCAAAGATCCTAAAATATACAAGTGTGGAGTTGTCCTGCCCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000609300.1 |
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| CDS CAA 90 bp | ATGGTTCCATGCACTTTAGGGTTGACATTTATTACTTTAAACAGGTaGGGTTCCATTCCTTGTATGCCTTTCTTTGCTCCAATAATTAGC | + |
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Preference number: 6 (lower is better) Translates to: MVPCTLGLTFITLNR*GSIPCMPFFAPIIS Trigger: GCTAATTATTGGAGCAAAGAAAGGCATACAAGGAATGGAACCCAACCTGTTTAAAGTAATAAATGTCAACCCTAAAGTGCATGGAACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS TCA 72 bp | GACCATCTTTCACCCCAAACAATCACTCTGAGTTTGTaGATATTTTCCGGTCATAGAAAGAGATTTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: DHLSPQTITLSL*IFSGHRKRFPK Trigger: TTTTGGAAATCTCTTTCTATGACCGGAAAATATTCACAAACTCAGAGTGATTGTTTGGGGTGAAAGATGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | GTTGATGACATTTACTCTGATTATAGGTGTAATCTATaGCAATTCCAAAAGTACCTTGTATGTCCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: VDDIYSDYRCNL*QFQKYLVCPIS Trigger: GGAGATGGGACATACAAGGTACTTTTGGAATTGCCATAGATTACACCTATAATCAGAGTAAATGTCATCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CCA 72 bp | TTTCATGATGCCATCGAATATTTGCAAATGCCTAAATaGAACCCTTTCTTCATTCTCCACACAAGTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: FHDAIEYLQMPK*NPFFILHTSPK Trigger: TTTTGGACTTGTGTGGAGAATGAAGAAAGGGTTCCATTTAGGCATTTGCAAATATTCGATGGCATCATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 90 bp | ACCCTTCCATTTAAATGTCCCACAAAGATTGCATCCGATCACAGCTaGCAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: TLPFKCPTKIASDHS*QERKKGKKERKKER Trigger: TCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTGCAAGCTGTGATCGGATGCAATCTTTGTGGGACATTTAAATGGAAGGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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| CDS CAA 72 bp | GACAACTCCACACTTGTATATTTTAGGATCTTTGCATaGACAAATGTTAATGGCTGTTGGTCTATTGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: DNSTLVYFRIFA*TNVNGCWSIGS Trigger: TGAACCAATAGACCAACAGCCATTAACATTTGTCAATGCAAAGATCCTAAAATATACAAGTGTGGAGTTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564492.1 ENST00000609300.1 |
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| CDS CAA 72 bp | TTTAAATGTCCCACAAAGATTGCATCCGATCACAGCTaGCAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: FKCPTKIASDHS*QERKKGKKERK Trigger: CTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTGCAAGCTGTGATCGGATGCAATCTTTGTGGGACATTTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564492.1 |
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