Pregenerated sensors for LINC00251 (Homo sapiens)
Ensembl gene IDs: ENSG00000280725Ensembl transcript IDs: ENST00000627569.1, ENST00000650029.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCCCTTCTGACAGTCACTCCAGAATGAGGGCAGGGCAGCAGGTGTaGGAACTGAGTCAGCTGCTCACCTGGGGATCCAATCCCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SPSDSHSRMRAGQQV*ELSQLLTWGSNPRG Trigger: ACCTCTGGGATTGGATCCCCAGGTGAGCAGCTGACTCAGTTCTCACACCTGCTGCCCTGCCCTCATTCTGGAGTGACTGTCAGAAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS GCA 90 bp | CAGCTCCTTCTTAACCTCTTACATTGGTCAGGATTTGGGCTCAGCTaGCGTAACAGAGGCCCCGTGTATGGAGGCTTACACGGCCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: QLLLNLLHWSGFGLS*RNRGPVYGGLHGLG Trigger: TCCTAGGCCGTGTAAGCCTCCATACACGGGGCCTCTGTTACGGCAGCTGAGCCCAAATCCTGACCAATGTAAGAGGTTAAGAAGGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS CCA 90 bp | GGGTGGGATGAAGGATCCATTTCTAAGATGGCTTCCTCATGCATGTaGTCTCTTGCTCGACACAATGAATCTCTTCCTCCAGGGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GWDEGSISKMASSCM*SLARHNESLPPGPL Trigger: CAGAGGCCCTGGAGGAAGAGATTCATTGTGTCGAGCAAGAGACCACATGCATGAGGAAGCCATCTTAGAAATGGATCCTTCATCCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS TCA 90 bp | CTGCCTGCAGGAGAGACGAAAGGACTTTCTAGAGGGAAAGTCATTTaGTGGAAAGGAGAGTCCAAAACTAGGCACACAACTCCAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: LPAGETKGLSRGKVI*WKGESKTRHTTPGS Trigger: AGATCCTGGAGTTGTGTGCCTAGTTTTGGACTCTCCTTTCCATCAAATGACTTTCCCTCTAGAAAGTCCTTTCGTCTCTCCTGCAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS TCA 90 bp | AGGTTCTCTTGTGACGTTGATGTTGATGGTTTGGACATCACACTTTaGGAACCACAGCCCTGTAGTGTGGCCTTTGCCTTCCTAGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: RFSCDVDVDGLDITL*EPQPCSVAFAFLVK Trigger: TTTGACTAGGAAGGCAAAGGCCACACTACAGGGCTGTGGTTCTCAAAGTGTGATGTCCAAACCATCAACATCAACGTCACAAGAGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS CCA 90 bp | CCATGGAACACTGAAATGGGTGGGATGAAGGATCCATTTCTAAGATaGCTTCCTCATGCATGTGGTCTCTTGCTCGACACAATGAATCTC | + |
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Preference number: 5 (lower is better) Translates to: PWNTEMGGMKDPFLR*LPHACGLLLDTMNL Trigger: GAGATTCATTGTGTCGAGCAAGAGACCACATGCATGAGGAAGCCATCTTAGAAATGGATCCTTCATCCCACCCATTTCAGTGTTCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS TCA 90 bp | GTTGTCTTCCCTTCTTCTCCAAAGCACATGTTGAGAAACTACCATTaGTTCCACAGTCTTGACAGAGCAGTCTGCCAATCAATGGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: VVFPSSPKHMLRNYH*FHSLDRAVCQSMGF Trigger: AAACCCCATTGATTGGCAGACTGCTCTGTCAAGACTGTGGAATCAATGGTAGTTTCTCAACATGTGCTTTGGAGAAGAAGGGAAGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS CCA 90 bp | TTTGCATTTCTAACAGGTTCTCTTGTGACGTTGATGTTGATGGTTTaGACATCACACTTTGAGAACCACAGCCCTGTAGTGTGGCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: FAFLTGSLVTLMLMV*TSHFENHSPVVWPL Trigger: CAAAGGCCACACTACAGGGCTGTGGTTCTCAAAGTGTGATGTCCAAACCATCAACATCAACGTCACAAGAGAACCTGTTAGAAATGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS TCA 90 bp | TTCTCCAAAGCACATGTTGAGAAACTACCATTGATTCCACAGTCTTaGCAGAGCAGTCTGCCAATCAATGGGGTTTCAGCTCCTAAACTT | + |
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Preference number: 5 (lower is better) Translates to: FSKAHVEKLPLIPQS*QSSLPINGVSAPKL Trigger: AAGTTTAGGAGCTGAAACCCCATTGATTGGCAGACTGCTCTGTCAAGACTGTGGAATCAATGGTAGTTTCTCAACATGTGCTTTGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS TCA 90 bp | AGCCCACCTGGAGTTTCTGATTCTATAAGTCTTGGATGGGACCGATaGATTTGCATTTCTAACAGGTTCTCTTGTGACGTTGATGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: SPPGVSDSISLGWDR*ICISNRFSCDVDVD Trigger: ATCAACATCAACGTCACAAGAGAACCTGTTAGAAATGCAAATTCATCGGTCCCATCCAAGACTTATAGAATCAGAAACTCCAGGTGGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS TCA 72 bp | GACAGTCACTCCAGAATGAGGGCAGGGCAGCAGGTGTaGGAACTGAGTCAGCTGCTCACCTGGGGATCCAAT | + |
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Preference number: 6 (lower is better) Translates to: DSHSRMRAGQQV*ELSQLLTWGSN Trigger: ATTGGATCCCCAGGTGAGCAGCTGACTCAGTTCTCACACCTGCTGCCCTGCCCTCATTCTGGAGTGACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS CCA 72 bp | CAGGGCCTCTGCACATGGCTTGGGCTTCCCATAGCATaGTGTTTGCAGGACCGTTGCATTTCCTACAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: QGLCTWLGLPIA*CLQDRCISYRA Trigger: TGCTCTGTAGGAAATGCAACGGTCCTGCAAACACCATGCTATGGGAAGCCCAAGCCATGTGCAGAGGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS CAA 72 bp | CGAGCCACCCAGTGGTTTTGGTCCATTGGCTGCAGTTaGCCAGTCTCTGCTTTCGGGCATCATAATCACCTG | + |
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Preference number: 6 (lower is better) Translates to: RATQWFWSIGCS*PVSAFGHHNHL Trigger: CAGGTGATTATGATGCCCGAAAGCAGAGACTGGCAAACTGCAGCCAATGGACCAAAACCACTGGGTGGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS GCA 72 bp | CTTGGGCTTCCCATAGCATGGTGTTTGCAGGACCGTTaGATTTCCTACAGAGCATCTGGTTTCTCCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LGLPIAWCLQDR*ISYRASGFSQV Trigger: CACCTGGGAGAAACCAGATGCTCTGTAGGAAATGCAACGGTCCTGCAAACACCATGCTATGGGAAGCCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS GCA 72 bp | CTTAACCTCTTACATTGGTCAGGATTTGGGCTCAGCTaGCGTAACAGAGGCCCCGTGTATGGAGGCTTACAC | + |
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Preference number: 6 (lower is better) Translates to: LNLLHWSGFGLS*RNRGPVYGGLH Trigger: GTGTAAGCCTCCATACACGGGGCCTCTGTTACGGCAGCTGAGCCCAAATCCTGACCAATGTAAGAGGTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS CAA 72 bp | GCTTGGGCTTCCCATAGCATGGTGTTTGCAGGACCGTaGCATTTCCTACAGAGCATCTGGTTTCTCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AWASHSMVFAGP*HFLQSIWFLPG Trigger: ACCTGGGAGAAACCAGATGCTCTGTAGGAAATGCAACGGTCCTGCAAACACCATGCTATGGGAAGCCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS CAA 72 bp | CTCTGCACATGGCTTGGGCTTCCCATAGCATGGTGTTaGCAGGACCGTTGCATTTCCTACAGAGCATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LCTWLGLPIAWC*QDRCISYRASG Trigger: ACCAGATGCTCTGTAGGAAATGCAACGGTCCTGCAAACACCATGCTATGGGAAGCCCAAGCCATGTGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS CAA 72 bp | AGCAGCTCCTTCTTAACCTCTTACATTGGTCAGGATTaGGGCTCAGCTGCCGTAACAGAGGCCCCGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: SSSFLTSYIGQD*GSAAVTEAPCM Trigger: CATACACGGGGCCTCTGTTACGGCAGCTGAGCCCAAATCCTGACCAATGTAAGAGGTTAAGAAGGAGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS CAA 72 bp | CCATTTCTAAGATGGCTTCCTCATGCATGTGGTCTCTaGCTCGACACAATGAATCTCTTCCTCCAGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PFLRWLPHACGL*LDTMNLFLQGL Trigger: GAGGCCCTGGAGGAAGAGATTCATTGTGTCGAGCAAGAGACCACATGCATGAGGAAGCCATCTTAGAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS CAA 72 bp | ATGACTAAGCACTTTGGGCTTCAGTTCCTGAGAGCCTaGGGCTTTCCATGGAACACTGAAATGGGTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: MTKHFGLQFLRA*GFPWNTEMGGM Trigger: CATCCCACCCATTTCAGTGTTCCATGGAAAGCCCAAGGCTCTCAGGAACTGAAGCCCAAAGTGCTTAGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS CAA 90 bp | ATGAAGGATCCATTTCTAAGATGGCTTCCTCATGCATGTGGTCTCTaGCTCGACACAATGAATCTCTTCCTCCAGGGCCTCTGCACATGG | + |
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Preference number: 6 (lower is better) Translates to: MKDPFLRWLPHACGL*LDTMNLFLQGLCTW Trigger: CCATGTGCAGAGGCCCTGGAGGAAGAGATTCATTGTGTCGAGCAAGAGACCACATGCATGAGGAAGCCATCTTAGAAATGGATCCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS TCA 72 bp | TGTGACGTTGATGTTGATGGTTTGGACATCACACTTTaGGAACCACAGCCCTGTAGTGTGGCCTTTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CDVDVDGLDITL*EPQPCSVAFAF Trigger: GAAGGCAAAGGCCACACTACAGGGCTGTGGTTCTCAAAGTGTGATGTCCAAACCATCAACATCAACGTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS TCA 72 bp | TCACCTGGAGGGCTTTCTGAGCCCACCTGGAGTTTCTaGTTCTATAAGTCTTGGATGGGACCGATGAATTTG | + |
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Preference number: 6 (lower is better) Translates to: SPGGLSEPTWSF*FYKSWMGPMNL Trigger: CAAATTCATCGGTCCCATCCAAGACTTATAGAATCAGAAACTCCAGGTGGGCTCAGAAAGCCCTCCAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS TCA 72 bp | TTCTCCCAGGTGAGCCTAGTTAGTGTCAGTCAGATCTaGAATCCTGGTCTCCTGACTCCAGTGTTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FSQVSLVSVSQI*NPGLLTPVFFK Trigger: TTTGAAGAACACTGGAGTCAGGAGACCAGGATTTCAGATCTGACTGACACTAACTAGGCTCACCTGGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS CCA 72 bp | ACTGAAATGGGTGGGATGAAGGATCCATTTCTAAGATaGCTTCCTCATGCATGTGGTCTCTTGCTCGACACA | + |
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Preference number: 6 (lower is better) Translates to: TEMGGMKDPFLR*LPHACGLLLDT Trigger: TGTGTCGAGCAAGAGACCACATGCATGAGGAAGCCATCTTAGAAATGGATCCTTCATCCCACCCATTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS TCA 72 bp | GCACATGTTGAGAAACTACCATTGATTCCACAGTCTTaGCAGAGCAGTCTGCCAATCAATGGGGTTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AHVEKLPLIPQS*QSSLPINGVSA Trigger: AGCTGAAACCCCATTGATTGGCAGACTGCTCTGTCAAGACTGTGGAATCAATGGTAGTTTCTCAACATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS CCA 72 bp | CTAACAGGTTCTCTTGTGACGTTGATGTTGATGGTTTaGACATCACACTTTGAGAACCACAGCCCTGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: LTGSLVTLMLMV*TSHFENHSPVV Trigger: CACTACAGGGCTGTGGTTCTCAAAGTGTGATGTCCAAACCATCAACATCAACGTCACAAGAGAACCTGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS CAA 90 bp | GGTCTCCTGACTCCAGTGTTCTTCAAATATTTGAGCCCTAAGTCCTaGGTTAAGGGGCATCCAATAGCTGTGAAGCATGAACTTAAGATC | + |
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Preference number: 6 (lower is better) Translates to: GLLTPVFFKYLSPKS*VKGHPIAVKHELKI Trigger: GATCTTAAGTTCATGCTTCACAGCTATTGGATGCCCCTTAACCAAGGACTTAGGGCTCAAATATTTGAAGAACACTGGAGTCAGGAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS TCA 72 bp | CCTTCTTCTCCAAAGCACATGTTGAGAAACTACCATTaGTTCCACAGTCTTGACAGAGCAGTCTGCCAATCA | + |
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Preference number: 6 (lower is better) Translates to: PSSPKHMLRNYH*FHSLDRAVCQS Trigger: TGATTGGCAGACTGCTCTGTCAAGACTGTGGAATCAATGGTAGTTTCTCAACATGTGCTTTGGAGAAGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627569.1 |
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| CDS GCA 72 bp | TTTTGGAGTGAGCAGGCCAAACTGACAGAGCACTTCTaGTCCACTAAGTTATTCAGGGATCTAAGTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FWSEQAKLTEHF*STKLFRDLSSF Trigger: AAAGGAACTTAGATCCCTGAATAACTTAGTGGAGCAGAAGTGCTCTGTCAGTTTGGCCTGCTCACTCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS CAA 72 bp | AATCCTGGTCTCCTGACTCCAGTGTTCTTCAAATATTaGAGCCCTAAGTCCTTGGTTAAGGGGCATCCAATA | + |
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Preference number: 6 (lower is better) Translates to: NPGLLTPVFFKY*SPKSLVKGHPI Trigger: TATTGGATGCCCCTTAACCAAGGACTTAGGGCTCAAATATTTGAAGAACACTGGAGTCAGGAGACCAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627569.1 ENST00000650029.1 |
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| CDS CAA 90 bp | ACCGATGAATTTGCATTTCTAACAGGTTCTCTTGTGACGTTGATGTaGATGGTTTGGACATCACACTTTGAGAACCACAGCCCTGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: TDEFAFLTGSLVTLM*MVWTSHFENHSPVV Trigger: CACTACAGGGCTGTGGTTCTCAAAGTGTGATGTCCAAACCATCAACATCAACGTCACAAGAGAACCTGTTAGAAATGCAAATTCATCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS CAA 72 bp | TTTACTGAGCAAGCCTTTATGGCAATAGTTCTCAACTaGAATGCGGAGGTTGGCAAACTTTCTGTAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: FTEQAFMAIVLN*NAEVGKLSVKG Trigger: GCCTTTTACAGAAAGTTTGCCAACCTCCGCATTCAAGTTGAGAACTATTGCCATAAAGGCTTGCTCAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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| CDS TCA 72 bp | GGAGTTTCTGATTCTATAAGTCTTGGATGGGACCGATaGATTTGCATTTCTAACAGGTTCTCTTGTGACGTT | + |
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Preference number: 6 (lower is better) Translates to: GVSDSISLGWDR*ICISNRFSCDV Trigger: AACGTCACAAGAGAACCTGTTAGAAATGCAAATTCATCGGTCCCATCCAAGACTTATAGAATCAGAAACTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650029.1 |
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