Pregenerated sensors for LINC00244 (Homo sapiens)
Ensembl gene IDs: ENSG00000279418Ensembl transcript IDs: ENST00000625073.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCGTTCTGCTCTCTGGCTGGCCTTCATGCCAGCGCCCTGCCACCTaGTTCCTGGCCTGCCACACCACCTTGGGAAGAAGCCTTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVLLSGWPSCQRPAT*FLACHTTLGRSLLC Trigger: GCACAGAAGGCTTCTTCCCAAGGTGGTGTGGCAGGCCAGGAAGCAGGTGGCAGGGCGCTGGCATGAAGGCCAGCCAGAGAGCAGAACGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS GCA 90 bp | GGTGTTTGGCGTTCTGCTCTCTGGCTGGCCTTCATGCCAGCGCCCTaGCACCTGCTTCCTGGCCTGCCACACCACCTTGGGAAGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GVWRSALWLAFMPAP*HLLPGLPHHLGKKP Trigger: AGGCTTCTTCCCAAGGTGGTGTGGCAGGCCAGGAAGCAGGTGGCAGGGCGCTGGCATGAAGGCCAGCCAGAGAGCAGAACGCCAAACACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS CCA 90 bp | TGCTCTCTGGCTGGCCTTCATGCCAGCGCCCTGCCACCTGCTTCCTaGCCTGCCACACCACCTTGGGAAGAAGCCTTCTGTGCTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSLAGLHASALPPAS*PATPPWEEAFCASD Trigger: GTCAGAAGCACAGAAGGCTTCTTCCCAAGGTGGTGTGGCAGGCCAGGAAGCAGGTGGCAGGGCGCTGGCATGAAGGCCAGCCAGAGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS CCA 90 bp | TCTGTGCTTCTGACTTTCTGCTTCGTGTGGCTACTATGTGAAACCTaGGGTCTCCAGGGGCCTGCTCCCACAGGCTCAGTGAGCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVLLTFCFVWLLCET*GLQGPAPTGSVSRG Trigger: CCCTCTGCTCACTGAGCCTGTGGGAGCAGGCCCCTGGAGACCCCAGGTTTCACATAGTAGCCACACGAAGCAGAAAGTCAGAAGCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS TCA 90 bp | GAAGCCTTCTGTGCTTCTGACTTTCTGCTTCGTGTGGCTACTATGTaGAACCTGGGGTCTCCAGGGGCCTGCTCCCACAGGCTCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EAFCASDFLLRVATM*NLGSPGACSHRLSE Trigger: CTCACTGAGCCTGTGGGAGCAGGCCCCTGGAGACCCCAGGTTTCACATAGTAGCCACACGAAGCAGAAAGTCAGAAGCACAGAAGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS GCA 90 bp | CTGCCACACCACCTTGGGAAGAAGCCTTCTGTGCTTCTGACTTTCTaGTTCGTGTGGCTACTATGTGAAACCTGGGGTCTCCAGGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPHHLGKKPSVLLTF*FVWLLCETWGLQGP Trigger: AGGCCCCTGGAGACCCCAGGTTTCACATAGTAGCCACACGAAGCAGAAAGTCAGAAGCACAGAAGGCTTCTTCCCAAGGTGGTGTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS CCA 90 bp | CACCTTGGGAAGAAGCCTTCTGTGCTTCTGACTTTCTGCTTCGTGTaGCTACTATGTGAAACCTGGGGTCTCCAGGGGCCTGCTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: HLGKKPSVLLTFCFV*LLCETWGLQGPAPT Trigger: TGTGGGAGCAGGCCCCTGGAGACCCCAGGTTTCACATAGTAGCCACACGAAGCAGAAAGTCAGAAGCACAGAAGGCTTCTTCCCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS TCA 90 bp | TTCCTGGCCTGCCACACCACCTTGGGAAGAAGCCTTCTGTGCTTCTaGCTTTCTGCTTCGTGTGGCTACTATGTGAAACCTGGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLACHTTLGRSLLCF*LSASCGYYVKPGVS Trigger: GGAGACCCCAGGTTTCACATAGTAGCCACACGAAGCAGAAAGTCAGAAGCACAGAAGGCTTCTTCCCAAGGTGGTGTGGCAGGCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS TCA 90 bp | TTAGCTTGTCCCATCTATGCTGTTAGCTCCATTTACCTTGGGTTGTaGTATTATTTCCCAATTTCCTGCATGGTATTTAATAGCGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LACPIYAVSSIYLGL*YYFPISCMVFNSET Trigger: TGTTTCGCTATTAAATACCATGCAGGAAATTGGGAAATAATATCACAACCCAAGGTAAATGGAGCTAACAGCATAGATGGGACAAGCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS TCA 72 bp | CCTGGGGTCTCCAGGGGCCTGCTCCCACAGGCTCAGTaGGCAGAGGGAGTTTCCCAGCCTGCCCATGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGVSRGLLPQAQ*AEGVSQPAHDC Trigger: GCAGTCATGGGCAGGCTGGGAAACTCCCTCTGCTCACTGAGCCTGTGGGAGCAGGCCCCTGGAGACCCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS GCA 72 bp | CTCTCTGGCTGGCCTTCATGCCAGCGCCCTGCCACCTaGTTCCTGGCCTGCCACACCACCTTGGGAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSGWPSCQRPAT*FLACHTTLGRS Trigger: GCTTCTTCCCAAGGTGGTGTGGCAGGCCAGGAAGCAGGTGGCAGGGCGCTGGCATGAAGGCCAGCCAGAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS GCA 72 bp | TGCCAGTGGAACCCCAGGGGCTGGTGTTTGGCGTTCTaGTCTCTGGCTGGCCTTCATGCCAGCGCCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CQWNPRGWCLAF*SLAGLHASALP Trigger: TGGCAGGGCGCTGGCATGAAGGCCAGCCAGAGAGCAGAACGCCAAACACCAGCCCCTGGGGTTCCACTGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS CCA 72 bp | CTGACTTTCTGCTTCGTGTGGCTACTATGTGAAACCTaGGGTCTCCAGGGGCCTGCTCCCACAGGCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LTFCFVWLLCET*GLQGPAPTGSV Trigger: CACTGAGCCTGTGGGAGCAGGCCCCTGGAGACCCCAGGTTTCACATAGTAGCCACACGAAGCAGAAAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS TCA 72 bp | TGTGCTTCTGACTTTCTGCTTCGTGTGGCTACTATGTaGAACCTGGGGTCTCCAGGGGCCTGCTCCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: CASDFLLRVATM*NLGSPGACSHR Trigger: CCTGTGGGAGCAGGCCCCTGGAGACCCCAGGTTTCACATAGTAGCCACACGAAGCAGAAAGTCAGAAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||
| CDS CCA 72 bp | TTCTCATGGGGTCTTCCCAGGTCTGGAGTCGCAAGCTaGTCCTCATGTCTTAGCTTGTCCCATCTATGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSWGLPRSGVAS*SSCLSLSHLCC Trigger: ACAGCATAGATGGGACAAGCTAAGACATGAGGACCAGCTTGCGACTCCAGACCTGGGAAGACCCCATGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625073.1 |
||