Pregenerated sensors for LINC00237 (Homo sapiens)
Ensembl gene IDs: ENSG00000225127Ensembl transcript IDs: ENST00000420705.2, ENST00000455890.2, ENST00000593272.1, ENST00000655093.1, ENST00000668193.1, ENST00000668281.1, ENST00000670814.1, ENST00000671648.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGGAAGGCGCAGACCCACCGCTCGCCAAGCCTCGCCCCGCACTGTaGACGGGAAGAGGGGGCTCCGCGCGCAGCCCAGTCCGGTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: WEGADPPLAKPRPAL*TGRGGSARSPVRLA Trigger: AGCTAACCGGACTGGGCTGCGCGCGGAGCCCCCTCTTCCCGTGCACAGTGCGGGGCGAGGCTTGGCGAGCGGTGGGTCTGCGCCTTCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420705.2 |
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| CDS TCA 90 bp | GTGTCCAGCTTCAAATTCATACCTCCCAGCCTTCCCTGGCTTAAATaGAGGGAGATGACTTGTCCACAGGGACACTTCCTCCTCGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VSSFKFIPPSLPWLK*REMTCPQGHFLLVS Trigger: AGAAACGAGGAGGAAGTGTCCCTGTGGACAAGTCATCTCCCTTCATTTAAGCCAGGGAAGGCTGGGAGGTATGAATTTGAAGCTGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593272.1 |
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| CDS TCA 90 bp | AATGCATCATTCAGAATGTCTCCCGGACTACTGGCCTGGCTTAAATaGAGGGAGATGACTTGTCCACAGGGACACTTCCTCCTCGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: NASFRMSPGLLAWLK*REMTCPQGHFLLVS Trigger: AGAAACGAGGAGGAAGTGTCCCTGTGGACAAGTCATCTCCCTTCATTTAAGCCAGGCCAGTAGTCCGGGAGACATTCTGAATGATGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS TCA 90 bp | ATTCGGGGAGCTGTAGAAGTGCCCCCACTGGTCAGTAGGAGCATCTaGGGAAGTCTTGTCAATCTTTGGCTCTTATACTCATCCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: IRGAVEVPPLVSRSI*GSLVNLWLLYSSNL Trigger: CAAGTTGGATGAGTATAAGAGCCAAAGATTGACAAGACTTCCTCAGATGCTCCTACTGACCAGTGGGGGCACTTCTACAGCTCCCCGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS GCA 90 bp | TGCACAAACATGTTCACAGGTGCTGGAATCTTCCCCTGTCTCATGTaGTCATTTTTCCCTGCTGTCCATGAGAATGTTAGATACTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: CTNMFTGAGIFPCLM*SFFPAVHENVRYFL Trigger: CAGAAAGTATCTAACATTCTCATGGACAGCAGGGAAAAATGAGCACATGAGACAGGGGAAGATTCCAGCACCTGTGAACATGTTTGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS GCA 90 bp | CCCACGCCTTATAATTTAATCACACGCGATATTAAATTATCAAGCTaGTCATTAATCATCACGCGAGTTATTGGGACTGAACACGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: PTPYNLITRDIKLSS*SLIITRVIGTEHAA Trigger: GGCGGCGTGTTCAGTCCCAATAACTCGCGTGATGATTAATGAGCAGCTTGATAATTTAATATCGCGTGTGATTAAATTATAAGGCGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420705.2 |
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| CDS TCA 90 bp | TTCCAAGAATCCTGTAAAGCACCCTTTTCTGCATACCAGCCAATGTaGATGCAGAAAGAGTCGCTAGTTGTGATAATAAATATGTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: FQESCKAPFSAYQPM*MQKESLVVIINMSK Trigger: TTTTGACATATTTATTATCACAACTAGCGACTCTTTCTGCATTCACATTGGCTGGTATGCAGAAAAGGGTGCTTTACAGGATTCTTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000668193.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS GCA 90 bp | AGGAAGTCTTGTCAATCTTTGGCTCTTATACTCATCCAACTTGCCTaGAGATCTTCCTTTAGTGGTTCTACTAAAAACACAACAATACTT | + |
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Preference number: 5 (lower is better) Translates to: RKSCQSLALILIQLA*RSSFSGSTKNTTIL Trigger: AAGTATTGTTGTGTTTTTAGTAGAACCACTAAAGGAAGATCTGCAGGCAAGTTGGATGAGTATAAGAGCCAAAGATTGACAAGACTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS GCA 90 bp | TTACTTTATCATTATGAAAACTCTGAAGAGTCTGTGATTTTAGCCTaGCACAATCTCATGGATACTGGTAGAAGACACAAGATCCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LLYHYENSEESVILA*HNLMDTGRRHKILF Trigger: GAACAGGATCTTGTGTCTTCTACCAGTATCCATGAGATTGTGGCAGGCTAAAATCACAGACTCTTCAGAGTTTTCATAATGATAAAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655093.1 ENST00000668281.1 |
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| CDS CCA 72 bp | AAGAGGGGGCTCCGCGCGCAGCCCAGTCCGGTTAGCTaGTCGGCGTCGGCGGGGCTGCCGAGGTGGCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KRGLRAQPSPVS*SASAGLPRWRR Trigger: TCTGCGCCACCTCGGCAGCCCCGCCGACGCCGACCAGCTAACCGGACTGGGCTGCGCGCGGAGCCCCCTCTT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420705.2 |
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| CDS GCA 72 bp | CTCTCTCTCCCTCTGGACTCGGTGCTGAAGCCCCAGTaGAGCTCGCTCCTCCTTCTGTCAGCAGCTGGACCC | + |
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Preference number: 6 (lower is better) Translates to: LSLPLDSVLKPQ*SSLLLLSAAGP Trigger: GGGTCCAGCTGCTGACAGAAGGAGGAGCGAGCTGCACTGGGGCTTCAGCACCGAGTCCAGAGGGAGAGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670814.1 |
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| CDS GCA 72 bp | GCATCAGCAGCCTCTAATCTTCCAGCACATTCATGCTaGCCCAGTCTCTTCCCGCTCGCCTCTCTCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ASAASNLPAHSC*PSLFPLASLSL Trigger: GAGGGAGAGAGAGGCGAGCGGGAAGAGACTGGGGCAGCATGAATGTGCTGGAAGATTAGAGGCTGCTGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670814.1 |
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| CDS GCA 72 bp | GCATCAGCAGCCTCTAATCTTCCAGCACATTCATGCTaGCCCAGTCTCTTCTTGGGAAGGCGCAGACCCACC | + |
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Preference number: 6 (lower is better) Translates to: ASAASNLPAHSC*PSLFLGRRRPT Trigger: GGTGGGTCTGCGCCTTCCCAAGAAGAGACTGGGGCAGCATGAATGTGCTGGAAGATTAGAGGCTGCTGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000420705.2 ENST00000593272.1 ENST00000655093.1 |
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| CDS GCA 72 bp | TCAGCATCAGCAGCCTCTAATCTTCCAGCACATTCATaGTGCCCCAGTCTCTTCCCGCTCGCCTCTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SASAASNLPAHS*CPSLFPLASLS Trigger: GGAGAGAGAGGCGAGCGGGAAGAGACTGGGGCAGCATGAATGTGCTGGAAGATTAGAGGCTGCTGATGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670814.1 |
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| CDS TCA 72 bp | CTCCCGGACTACTGGCCTGGCTTAAATGAAGGGAGATaGCTTGTCCACAGGGACACTTCCTCCTCGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LPDYWPGLNEGR*LVHRDTSSSFL Trigger: GAGAAACGAGGAGGAAGTGTCCCTGTGGACAAGTCATCTCCCTTCATTTAAGCCAGGCCAGTAGTCCGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS CCA 72 bp | GTGGCAGAGGCAGAATTAAAACCCGGATGTGACCCATaGCAGAACCCACACTCTATTCTGCCTCCCCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: VAEAELKPGCDP*QNPHSILPPLE Trigger: CTCTAGGGGAGGCAGAATAGAGTGTGGGTTCTGCCATGGGTCACATCCGGGTTTTAATTCTGCCTCTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000668193.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS TCA 72 bp | TACCTCCCAGCCTTCCCTGGCTTAAATGAAGGGAGATaGCTTGTCCACAGGGACACTTCCTCCTCGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: YLPAFPGLNEGR*LVHRDTSSSFL Trigger: GAGAAACGAGGAGGAAGTGTCCCTGTGGACAAGTCATCTCCCTTCATTTAAGCCAGGGAAGGCTGGGAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593272.1 |
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| CDS TCA 72 bp | TTCAGAATGTCTCCCGGACTACTGGCCTGGCTTAAATaGAGGGAGATGACTTGTCCACAGGGACACTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FRMSPGLLAWLK*REMTCPQGHFL Trigger: GAGGAAGTGTCCCTGTGGACAAGTCATCTCCCTTCATTTAAGCCAGGCCAGTAGTCCGGGAGACATTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS TCA 72 bp | GCTGTAGAAGTGCCCCCACTGGTCAGTAGGAGCATCTaGGGAAGTCTTGTCAATCTTTGGCTCTTATACTCA | + |
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Preference number: 6 (lower is better) Translates to: AVEVPPLVSRSI*GSLVNLWLLYS Trigger: TGAGTATAAGAGCCAAAGATTGACAAGACTTCCTCAGATGCTCCTACTGACCAGTGGGGGCACTTCTACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS TCA 72 bp | TTCAAATTCATACCTCCCAGCCTTCCCTGGCTTAAATaGAGGGAGATGACTTGTCCACAGGGACACTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FKFIPPSLPWLK*REMTCPQGHFL Trigger: GAGGAAGTGTCCCTGTGGACAAGTCATCTCCCTTCATTTAAGCCAGGGAAGGCTGGGAGGTATGAATTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593272.1 |
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| CDS CCA 72 bp | CTGACTGGAAACCTGCACAAACATGTTCACAGGTGCTaGAATCTTCCCCTGTCTCATGTGCTCATTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LTGNLHKHVHRC*NLPLSHVLIFP Trigger: GGGAAAAATGAGCACATGAGACAGGGGAAGATTCCAGCACCTGTGAACATGTTTGTGCAGGTTTCCAGTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS CAA 72 bp | GGTCCAATCACAACACAGGAGACTGGATTCAAAGGCTaGAGGGATATCCATGTACTGACTGGAAACCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GPITTQETGFKG*RDIHVLTGNLH Trigger: GTGCAGGTTTCCAGTCAGTACATGGATATCCCTCAAGCCTTTGAATCCAGTCTCCTGTGTTGTGATTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS GCA 72 bp | CTAAGTCACCCACCTTTACAGATGGGGAAGCCTTCTTaGACATCTAATAGGGTTTTCCAGTGTGCTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LSHPPLQMGKPS*TSNRVFQCAQG Trigger: ACCTTGAGCACACTGGAAAACCCTATTAGATGTGCAAGAAGGCTTCCCCATCTGTAAAGGTGGGTGACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000668193.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS GCA 72 bp | GTACTGACTGGAAACCTGCACAAACATGTTCACAGGTaGTGGAATCTTCCCCTGTCTCATGTGCTCATTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLTGNLHKHVHR*WNLPLSHVLIF Trigger: AAAAATGAGCACATGAGACAGGGGAAGATTCCAGCACCTGTGAACATGTTTGTGCAGGTTTCCAGTCAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS CCA 72 bp | TGGATTCAAAGGCTTGAGGGATATCCATGTACTGACTaGAAACCTGCACAAACATGTTCACAGGTGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: WIQRLEGYPCTD*KPAQTCSQVLE Trigger: TTCCAGCACCTGTGAACATGTTTGTGCAGGTTTCCAGTCAGTACATGGATATCCCTCAAGCCTTTGAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS CCA 72 bp | CCTAATGACAAACGGTCCAATCACAACACAGGAGACTaGATTCAAAGGCTTGAGGGATATCCATGTACTGAC | + |
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Preference number: 6 (lower is better) Translates to: PNDKRSNHNTGD*IQRLEGYPCTD Trigger: GTCAGTACATGGATATCCCTCAAGCCTTTGAATCCAGTCTCCTGTGTTGTGATTGGACCGTTTGTCATTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS CAA 90 bp | ATGACAAACGGTCCAATCACAACACAGGAGACTGGATTCAAAGGCTaGAGGGATATCCATGTACTGACTGGAAACCTGCACAAACATGTT | + |
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Preference number: 6 (lower is better) Translates to: MTNGPITTQETGFKG*RDIHVLTGNLHKHV Trigger: AACATGTTTGTGCAGGTTTCCAGTCAGTACATGGATATCCCTCAAGCCTTTGAATCCAGTCTCCTGTGTTGTGATTGGACCGTTTGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS TCA 72 bp | TCCTGTAAAGCACCCTTTTCTGCATACCAGCCAATGTaGATGCAGAAAGAGTCGCTAGTTGTGATAATAAAT | + |
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Preference number: 6 (lower is better) Translates to: SCKAPFSAYQPM*MQKESLVVIIN Trigger: ATTTATTATCACAACTAGCGACTCTTTCTGCATTCACATTGGCTGGTATGCAGAAAAGGGTGCTTTACAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000668193.1 ENST00000670814.1 ENST00000671648.1 |
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| CDS GCA 72 bp | TTCACACATCAAGTGTTTATGGCAGCAAACTCCTCCTaGCAATTAATTACACAGTACCTGTTCTCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FTHQVFMAANSS*QLITQYLFSSS Trigger: AGAAGAAGAGAACAGGTACTGTGTAATTAATTGGCAGGAGGAGTTTGCTGCCATAAACACTTGATGTGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593272.1 |
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| CDS GCA 72 bp | CATTATGAAAACTCTGAAGAGTCTGTGATTTTAGCCTaGCACAATCTCATGGATACTGGTAGAAGACACAAG | + |
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Preference number: 6 (lower is better) Translates to: HYENSEESVILA*HNLMDTGRRHK Trigger: CTTGTGTCTTCTACCAGTATCCATGAGATTGTGGCAGGCTAAAATCACAGACTCTTCAGAGTTTTCATAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655093.1 ENST00000668281.1 |
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| CDS GCA 72 bp | TGTCAATCTTTGGCTCTTATACTCATCCAACTTGCCTaGAGATCTTCCTTTAGTGGTTCTACTAAAAACACA | + |
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Preference number: 6 (lower is better) Translates to: CQSLALILIQLA*RSSFSGSTKNT Trigger: TGTGTTTTTAGTAGAACCACTAAAGGAAGATCTGCAGGCAAGTTGGATGAGTATAAGAGCCAAAGATTGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000420705.2 ENST00000455890.2 ENST00000655093.1 ENST00000668193.1 ENST00000668281.1 ENST00000670814.1 ENST00000671648.1 |
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