Pregenerated sensors for LINC00229 (Homo sapiens)

Ensembl gene IDs: ENSG00000234300

Ensembl transcript IDs: ENST00000443783.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	GGGGACAAGCCAGGTAGACGTGGGCACCAGGGGACCTaGAGAGCCTCTCCCGGGTTGGCATCTCATCTTGGT	+
Preference number: 6 (lower is better) Translates to: GDKPGRRGHQGT*RASPGLASHLG Trigger: ACCAAGATGAGATGCCAACCCGGGAGAGGCTCTGCAGGTCCCCTGGTGCCCACGTCTACCTGGCTTGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443783.1
CDS GCA 72 bp	GCAACCTGGCAACTAAGCCGCATCGTCCTGGGCACCTaGTGTCTCTTCTCTGGAGCTGCTGGCTGGCTCTGG	+
Preference number: 6 (lower is better) Translates to: ATWQLSRIVLGT*CLFSGAAGWLW Trigger: CCAGAGCCAGCCAGCAGCTCCAGAGAAGAGACAGCAGGTGCCCAGGACGATGCGGCTTAGTTGCCAGGTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443783.1
CDS CAA 72 bp	GGACCTGCAGAGCCTCTCCCGGGTTGGCATCTCATCTaGGTGGTATCTCCCGTCATCTCTCTGTGTGGTGTA	+
Preference number: 6 (lower is better) Translates to: GPAEPLPGWHLI*VVSPVISLCGV Trigger: TACACCACACAGAGAGATGACGGGAGATACCACCAAGATGAGATGCCAACCCGGGAGAGGCTCTGCAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443783.1
CDS CCA 72 bp	CTGCAGAGCCTCTCCCGGGTTGGCATCTCATCTTGGTaGTATCTCCCGTCATCTCTCTGTGTGGTGTATCGA	+
Preference number: 6 (lower is better) Translates to: LQSLSRVGISSW*YLPSSLCVVYR Trigger: TCGATACACCACACAGAGAGATGACGGGAGATACCACCAAGATGAGATGCCAACCCGGGAGAGGCTCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443783.1
CDS CCA 72 bp	GACCTGCAGAGCCTCTCCCGGGTTGGCATCTCATCTTaGTGGTATCTCCCGTCATCTCTCTGTGTGGTGTAT	+
Preference number: 6 (lower is better) Translates to: DLQSLSRVGISS*WYLPSSLCVVY Trigger: ATACACCACACAGAGAGATGACGGGAGATACCACCAAGATGAGATGCCAACCCGGGAGAGGCTCTGCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443783.1
CDS CAA 90 bp	GCTCTACCCTCCTACAGCCATCCAGCAAACATTTTAAGGTGTCTCTaGCCCTTTGAGGTCCATAGAACACTTTCAAATATTGGATGTTTC	+
Preference number: 6 (lower is better) Translates to: ALPSYSHPANILRCL*PFEVHRTLSNIGCF Trigger: GAAACATCCAATATTTGAAAGTGTTCTATGGACCTCAAAGGGCAAGAGACACCTTAAAATGTTTGCTGGATGGCTGTAGGAGGGTAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443783.1

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