Pregenerated sensors for LINC00211 (Homo sapiens)
Ensembl gene IDs: ENSG00000237803Ensembl transcript IDs: ENST00000413792.5, ENST00000418746.1, ENST00000446799.6, ENST00000655678.1, ENST00000655948.1, ENST00000656652.1, ENST00000659701.1, ENST00000667610.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCCACTTGTGGGGGCTGGTTTCGCAGGAACGGCTCCGGAGAGCTTaGAGAGGGGTAGGCTGCAGGCCCACAGCCGCAGTCTCTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SHLWGLVSQERLRRA*RGVGCRPTAAVSLS Trigger: GCTGAGAGAGACTGCGGCTGTGGGCCTGCAGCCTACCCCTCTTCAAGCTCTCCGGAGCCGTTCCTGCGAAACCAGCCCCCACAAGTGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659701.1 ENST00000667610.1 |
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| CDS TCA 90 bp | CCTTATTTGTGGGGGCTGGTTTCGCAGGAACGGCTCCGGAGAGCTTaGAGAGGGGTAGGCTGCAGGCCCACAGCCGCAGTCTCTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: PYLWGLVSQERLRRA*RGVGCRPTAAVSLS Trigger: GCTGAGAGAGACTGCGGCTGTGGGCCTGCAGCCTACCCCTCTTCAAGCTCTCCGGAGCCGTTCCTGCGAAACCAGCCCCCACAAATAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 |
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| CDS TCA 90 bp | GTCTCTTCACTGCTCAACAGTCTTCAGGGACTCCCCGTCCACTACTaGATCAATTCCCTTGGCATTCTCTGCTTCACCAAGTCCCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: VSSLLNSLQGLPVHY*INSLGILCFTKSLN Trigger: ATTAAGGGACTTGGTGAAGCAGAGAATGCCAAGGGAATTGATTCAGTAGTGGACGGGGAGTCCCTGAAGACTGTTGAGCAGTGAAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000418746.1 ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 |
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| CDS GCA 90 bp | ATCAAATCCTTTGCAGGTTCATGCAAGGTGGTTAGGGTCCTTCCATaGCATGTAGAGACTTTGATCTTCATCCTTAGGGGTCAGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: IKSFAGSCKVVRVLP*HVETLIFILRGQER Trigger: CCTCTCCTGACCCCTAAGGATGAAGATCAAAGTCTCTACATGGCATGGAAGGACCCTAACCACCTTGCATGAACCTGCAAAGGATTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667610.1 |
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| CDS GCA 90 bp | TACTTCCCATTCCCTGTAGCTGTAGACGGAGGGAAGGCTGAGGGTTaGTCATTTGACAGGCATCATTATCTTATTTCTCAGCTGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: YFPFPVAVDGGKAEG*SFDRHHYLISQLIR Trigger: TCTGATCAGCTGAGAAATAAGATAATGATGCCTGTCAAATGAGCAACCCTCAGCCTTCCCTCCGTCTACAGCTACAGGGAATGGGAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418746.1 |
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| CDS CCA 90 bp | ATTTCTGCCATTTGCCCAGGACAGTGCATCAAATACTCCCTAGGATaGATCACAACGAGCCATGGTTCTGGTATTTCACAACCTTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: ISAICPGQCIKYSLG*ITTSHGSGISQPCV Trigger: TACACAAGGTTGTGAAATACCAGAACCATGGCTCGTTGTGATCCATCCTAGGGAGTATTTGATGCACTGTCCTGGGCAAATGGCAGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655678.1 |
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| CDS TCA 90 bp | GTGGACAGTCACCATTGTCATTTAAAGGGTGAGCTGTATTTCTTCTaGAGTAAAGTGATGAGTCCAGGCAGTACACTCACTCTATCAGAT | + |
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Preference number: 5 (lower is better) Translates to: VDSHHCHLKGELYFF*SKVMSPGSTLTLSD Trigger: ATCTGATAGAGTGAGTGTACTGCCTGGACTCATCACTTTACTTCAGAAGAAATACAGCTCACCCTTTAAATGACAATGGTGACTGTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS GCA 90 bp | ATCAAATCCTTTGCAGGTTCATGCAAGGTGGTTAGGGTCCTTCCATaGCATGTAGAGACTTTGATCTTCATCAGGCGTTTGTTTTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: IKSFAGSCKVVRVLP*HVETLIFIRRLFCF Trigger: AAAACAAAACAAACGCCTGATGAAGATCAAAGTCTCTACATGGCATGGAAGGACCCTAACCACCTTGCATGAACCTGCAAAGGATTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659701.1 |
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| CDS TCA 90 bp | AAAGTAGAAAGCATGGCAAGAGTAGAGCATCTGAATGTCATCCATTaGCCCCAAATTCAATGCTGGAATGGAATATTGTACATTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: KVESMARVEHLNVIH*PQIQCWNGILYIES Trigger: GGACTCAATGTACAATATTCCATTCCAGCATTGAATTTGGGGTCAATGGATGACATTCAGATGCTCTACTCTTGCCATGCTTTCTACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656652.1 |
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| CDS TCA 72 bp | TGGGGGCTGGTTTCGCAGGAACGGCTCCGGAGAGCTTaGAGAGGGGTAGGCTGCAGGCCCACAGCCGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: WGLVSQERLRRA*RGVGCRPTAAV Trigger: GACTGCGGCTGTGGGCCTGCAGCCTACCCCTCTTCAAGCTCTCCGGAGCCGTTCCTGCGAAACCAGCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 ENST00000659701.1 ENST00000667610.1 |
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| CDS CAA 72 bp | GTGGGGGCTGGTTTCGCAGGAACGGCTCCGGAGAGCTaGAAGAGGGGTAGGCTGCAGGCCCACAGCCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VGAGFAGTAPES*KRGRLQAHSRS Trigger: ACTGCGGCTGTGGGCCTGCAGCCTACCCCTCTTCAAGCTCTCCGGAGCCGTTCCTGCGAAACCAGCCCCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 ENST00000659701.1 ENST00000667610.1 |
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| CDS CAA 90 bp | CAGCCACTTGTGGGGGCTGGTTTCGCAGGAACGGCTCCGGAGAGCTaGAAGAGGGGTAGGCTGCAGGCCCACAGCCGCAGTCTCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QPLVGAGFAGTAPES*KRGRLQAHSRSLSQ Trigger: CTGAGAGAGACTGCGGCTGTGGGCCTGCAGCCTACCCCTCTTCAAGCTCTCCGGAGCCGTTCCTGCGAAACCAGCCCCCACAAGTGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659701.1 ENST00000667610.1 |
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| CDS CAA 90 bp | TCCTTATTTGTGGGGGCTGGTTTCGCAGGAACGGCTCCGGAGAGCTaGAAGAGGGGTAGGCTGCAGGCCCACAGCCGCAGTCTCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLFVGAGFAGTAPES*KRGRLQAHSRSLSQ Trigger: CTGAGAGAGACTGCGGCTGTGGGCCTGCAGCCTACCCCTCTTCAAGCTCTCCGGAGCCGTTCCTGCGAAACCAGCCCCCACAAATAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 |
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| CDS CAA 72 bp | CTTGCCTCTTCCAGCTTTTGCTGGCACCAGGCATTTTaGGCCTGCAGCAGCCTCACTCCAGTCTCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LASSSFCWHQAF*ACSSLTPVSAS Trigger: GGAGGCAGAGACTGGAGTGAGGCTGCTGCAGGCCAAAAATGCCTGGTGCCAGCAAAAGCTGGAAGAGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413792.5 ENST00000655948.1 |
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| CDS CCA 72 bp | TGGGGACCACCATTCAGTTCACTACAGCTGAGCAGCTaGGATTTGACTCAAGCAGTCCAGCTCCAGCACGTG | + |
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Preference number: 6 (lower is better) Translates to: WGPPFSSLQLSS*DLTQAVQLQHV Trigger: CACGTGCTGGAGCTGGACTGCTTGAGTCAAATCCCAGCTGCTCAGCTGTAGTGAACTGAATGGTGGTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413792.5 ENST00000655948.1 |
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| CDS GCA 72 bp | TGCAATACAGTGACCTTAGTTACAGGAGGATGGCCTTaGAGAGTATCCAGCAGCCCCAGGGCTTCTCATGGC | + |
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Preference number: 6 (lower is better) Translates to: CNTVTLVTGGWP*RVSSSPRASHG Trigger: GCCATGAGAAGCCCTGGGGCTGCTGGATACTCTGCAAGGCCATCCTCCTGTAACTAAGGTCACTGTATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418746.1 |
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| CDS CCA 72 bp | ACGTGGCCTCCGACCATCACGCCATGCTCTCTCATGTaGTTACTTTTCACAGGTGTCAGCAAAATGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TWPPTITPCSLM*LLFTGVSKMPA Trigger: AGCAGGCATTTTGCTGACACCTGTGAAAAGTAACCACATGAGAGAGCATGGCGTGATGGTCGGAGGCCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413792.5 ENST00000655948.1 |
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| CDS CCA 72 bp | ATTTCTCTGAATCCCAGCTTCCTTATTTGTGGGGGCTaGTTTCGCAGGAACGGCTCCGGAGAGCTTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ISLNPSFLICGG*FRRNGSGELEE Trigger: CTCTTCAAGCTCTCCGGAGCCGTTCCTGCGAAACCAGCCCCCACAAATAAGGAAGCTGGGATTCAGAGAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 |
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| CDS CAA 72 bp | AAGCCAGTGAGAGTCTCAAGGCAGATTCTGAAGGCCTaGAACCACCTGAGCCTGGCCAGATGGATTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: KPVRVSRQILKA*NHLSLARWILP Trigger: AGGAAGAATCCATCTGGCCAGGCTCAGGTGGTTCAAGGCCTTCAGAATCTGCCTTGAGACTCTCACTGGCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS CAA 90 bp | GGTTCATGCAAGGTGGTTAGGGTCCTTCCATGCCATGTAGAGACTTaGATCTTCATCCTTAGGGGTCAGGAGAGGGAGCAATCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSCKVVRVLPCHVET*IFILRGQEREQSGQ Trigger: CTGGCCTGATTGCTCCCTCTCCTGACCCCTAAGGATGAAGATCAAAGTCTCTACATGGCATGGAAGGACCCTAACCACCTTGCATGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667610.1 |
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| CDS TCA 72 bp | CTGCTCAACAGTCTTCAGGGACTCCCCGTCCACTACTaGATCAATTCCCTTGGCATTCTCTGCTTCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: LLNSLQGLPVHY*INSLGILCFTK Trigger: CTTGGTGAAGCAGAGAATGCCAAGGGAATTGATTCAGTAGTGGACGGGGAGTCCCTGAAGACTGTTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000418746.1 ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 |
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| CDS CAA 90 bp | AGCCTGGCCAGATGGATTCTTCCTTTCACTGTTGTGACCATTGCTTaGGTGTCAGAACCCTATGGGAGAGCTGAGTCCATGACCAGAATC | + |
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Preference number: 6 (lower is better) Translates to: SLARWILPFTVVTIA*VSEPYGRAESMTRI Trigger: GATTCTGGTCATGGACTCAGCTCTCCCATAGGGTTCTGACACCAAAGCAATGGTCACAACAGTGAAAGGAAGAATCCATCTGGCCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS TCA 72 bp | GACCATTGCTTTGGTGTCAGAACCCTATGGGAGAGCTaGGTCCATGACCAGAATCCTCATGCCTTTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: DHCFGVRTLWES*VHDQNPHAFHN Trigger: GTTGTGAAAGGCATGAGGATTCTGGTCATGGACTCAGCTCTCCCATAGGGTTCTGACACCAAAGCAATGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS TCA 72 bp | GTGGGTGTTAGGTCACTACCCAGACAACAGCAGAGTTaGCGGTTCTACCCTAGCTCTCTTTTGATGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VGVRSLPRQQQS*RFYPSSLLMRE Trigger: TTCCCTCATCAAAAGAGAGCTAGGGTAGAACCGTCAACTCTGCTGTTGTCTGGGTAGTGACCTAACACCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS CAA 72 bp | AAGGTGGTTAGGGTCCTTCCATGCCATGTAGAGACTTaGATCTTCATCCTTAGGGGTCAGGAGAGGGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: KVVRVLPCHVET*IFILRGQEREQ Trigger: TTGCTCCCTCTCCTGACCCCTAAGGATGAAGATCAAAGTCTCTACATGGCATGGAAGGACCCTAACCACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667610.1 |
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| CDS CAA 90 bp | TTCTTGCGCTGTGCTCATCTCTTCTTTCTGTTAAAGCTCGGTGCTTaGCAAGCTGTCGTTAAATTGCTTACACGGATGGACGGGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FLRCAHLFFLLKLGA*QAVVKLLTRMDGAK Trigger: CTTGGCCCCGTCCATCCGTGTAAGCAATTTAACGACAGCTTGCAAAGCACCGAGCTTTAACAGAAAGAAGAGATGAGCACAGCGCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS CCA 72 bp | ATTCTGAAGGCCTTGAACCACCTGAGCCTGGCCAGATaGATTCTTCCTTTCACTGTTGTGACCATTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ILKALNHLSLAR*ILPFTVVTIAL Trigger: CAAAGCAATGGTCACAACAGTGAAAGGAAGAATCCATCTGGCCAGGCTCAGGTGGTTCAAGGCCTTCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS CAA 90 bp | TCAACAGTCTTCAGGGACTCCCCGTCCACTACTGAATCAATTCCCTaGGCATTCTCTGCTTCACCAAGTCCCTTAATTTCTCTGAATCCC | + |
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Preference number: 6 (lower is better) Translates to: STVFRDSPSTTESIP*AFSASPSPLISLNP Trigger: GGGATTCAGAGAAATTAAGGGACTTGGTGAAGCAGAGAATGCCAAGGGAATTGATTCAGTAGTGGACGGGGAGTCCCTGAAGACTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000418746.1 ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 |
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| CDS CAA 90 bp | TCTCTTCCGGGTCTGCAACTTCTTCTGTCTCCTATAAGGAGACACTaGTCATTGGATATAGGACCCACCCTGATAATCCAGGATGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLPGLQLLLSPIRRH*SLDIGPTLIIQDVL Trigger: GAGAACATCCTGGATTATCAGGGTGGGTCCTATATCCAATGACAAGTGTCTCCTTATAGGAGACAGAAGAAGTTGCAGACCCGGAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413792.5 ENST00000655948.1 |
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| CDS GCA 72 bp | TTTGCAGGTTCATGCAAGGTGGTTAGGGTCCTTCCATaGCATGTAGAGACTTTGATCTTCATCAGGCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FAGSCKVVRVLP*HVETLIFIRRL Trigger: CAAACGCCTGATGAAGATCAAAGTCTCTACATGGCATGGAAGGACCCTAACCACCTTGCATGAACCTGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659701.1 |
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| CDS GCA 72 bp | TCAGATGTCACTAGCATCAAATCCTTTGCAGGTTCATaGAAGGTGGTTAGGGTCCTTCCATGCCATGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SDVTSIKSFAGS*KVVRVLPCHVE Trigger: CTCTACATGGCATGGAAGGACCCTAACCACCTTGCATGAACCTGCAAAGGATTTGATGCTAGTGACATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659701.1 ENST00000667610.1 |
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| CDS GCA 72 bp | TTTGCAGGTTCATGCAAGGTGGTTAGGGTCCTTCCATaGCATGTAGAGACTTTGATCTTCATCCTTAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: FAGSCKVVRVLP*HVETLIFILRG Trigger: ACCCCTAAGGATGAAGATCAAAGTCTCTACATGGCATGGAAGGACCCTAACCACCTTGCATGAACCTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667610.1 |
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| CDS CAA 72 bp | AGATGGATTCTTCCTTTCACTGTTGTGACCATTGCTTaGGTGTCAGAACCCTATGGGAGAGCTGAGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RWILPFTVVTIA*VSEPYGRAESM Trigger: CATGGACTCAGCTCTCCCATAGGGTTCTGACACCAAAGCAATGGTCACAACAGTGAAAGGAAGAATCCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS CAA 72 bp | TTCAGGGACTCCCCGTCCACTACTGAATCAATTCCCTaGGCATTCTCTGCTTCACCAAGTCCCTTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: FRDSPSTTESIP*AFSASPSPLIS Trigger: AGAAATTAAGGGACTTGGTGAAGCAGAGAATGCCAAGGGAATTGATTCAGTAGTGGACGGGGAGTCCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000418746.1 ENST00000446799.6 ENST00000655678.1 ENST00000656652.1 |
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| CDS CAA 72 bp | CCTAGAGCTCATCAGATGTCACTAGCATCAAATCCTTaGCAGGTTCATGCAAGGTGGTTAGGGTCCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PRAHQMSLASNP*QVHARWLGSFH Trigger: ATGGAAGGACCCTAACCACCTTGCATGAACCTGCAAAGGATTTGATGCTAGTGACATCTGATGAGCTCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659701.1 ENST00000667610.1 |
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| CDS CAA 90 bp | CTCTTCTTTCTGTTAAAGCTCGGTGCTTTGCAAGCTGTCGTTAAATaGCTTACACGGATGGACGGGGCCAAGATGGTTTTCAGTCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: LFFLLKLGALQAVVK*LTRMDGAKMVFSLK Trigger: CTTTAGACTGAAAACCATCTTGGCCCCGTCCATCCGTGTAAGCAATTTAACGACAGCTTGCAAAGCACCGAGCTTTAACAGAAAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS CAA 90 bp | TTGATAGGTGATGGGCAGGTCTTTCCAGCTAAGATACGTTTGGATTaGACAGTGCAATACAGTGACCTTAGTTACAGGAGGATGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LIGDGQVFPAKIRLD*TVQYSDLSYRRMAL Trigger: CAAGGCCATCCTCCTGTAACTAAGGTCACTGTATTGCACTGTCAAATCCAAACGTATCTTAGCTGGAAAGACCTGCCCATCACCTATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418746.1 |
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| CDS CAA 90 bp | AAGGGGTTGATAGGTGATGGGCAGGTCTTTCCAGCTAAGATACGTTaGGATTTGACAGTGCAATACAGTGACCTTAGTTACAGGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: KGLIGDGQVFPAKIR*DLTVQYSDLSYRRM Trigger: CATCCTCCTGTAACTAAGGTCACTGTATTGCACTGTCAAATCCAAACGTATCTTAGCTGGAAAGACCTGCCCATCACCTATCAACCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418746.1 |
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| CDS CCA 72 bp | ATTTGCCCAGGACAGTGCATCAAATACTCCCTAGGATaGATCACAACGAGCCATGGTTCTGGTATTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: ICPGQCIKYSLG*ITTSHGSGISQ Trigger: TTGTGAAATACCAGAACCATGGCTCGTTGTGATCCATCCTAGGGAGTATTTGATGCACTGTCCTGGGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655678.1 |
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| CDS CAA 72 bp | GATGGGCAGGTCTTTCCAGCTAAGATACGTTTGGATTaGACAGTGCAATACAGTGACCTTAGTTACAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: DGQVFPAKIRLD*TVQYSDLSYRR Trigger: CCTCCTGTAACTAAGGTCACTGTATTGCACTGTCAAATCCAAACGTATCTTAGCTGGAAAGACCTGCCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418746.1 |
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| CDS CAA 90 bp | AAATTTCCATCCAAATCAGCAAAGATTCTTACAAGTCATCTGTGCTaGCATGTAATAATTTTCTGCCCCCTCCAGCCTGGGAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KFPSKSAKILTSHLC*HVIIFCPLQPGSSW Trigger: CCAGGAGCTCCCAGGCTGGAGGGGGCAGAAAATTATTACATGCAAGCACAGATGACTTGTAAGAATCTTTGCTGATTTGGATGGAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656652.1 |
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| CDS TCA 72 bp | ATGGGCAGGTCTTTCCAGCTAAGATACGTTTGGATTTaGCAGTGCAATACAGTGACCTTAGTTACAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: MGRSFQLRYVWI*QCNTVTLVTGG Trigger: TCCTCCTGTAACTAAGGTCACTGTATTGCACTGTCAAATCCAAACGTATCTTAGCTGGAAAGACCTGCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418746.1 |
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| CDS GCA 72 bp | ACAAATCATCACAGAGCTGAAATGCTCATTTTTCTGTaGTGCTACTCTGTCCATGTTCCAGAAAGGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: TNHHRAEMLIFL*CYSVHVPERQH Trigger: GTGCTGCCTTTCTGGAACATGGACAGAGTAGCAGCACAGAAAAATGAGCATTTCAGCTCTGTGATGATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413792.5 ENST00000655948.1 |
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| CDS GCA 72 bp | GATATGGAATTTATTTCTGCCATTTGCCCAGGACAGTaGATCAAATACTCCCTAGGATGGATCACAACGAGC | + |
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Preference number: 6 (lower is better) Translates to: DMEFISAICPGQ*IKYSLGWITTS Trigger: GCTCGTTGTGATCCATCCTAGGGAGTATTTGATGCACTGTCCTGGGCAAATGGCAGAAATAAATTCCATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655678.1 |
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| CDS CAA 72 bp | TGTGCTCATCTCTTCTTTCTGTTAAAGCTCGGTGCTTaGCAAGCTGTCGTTAAATTGCTTACACGGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: CAHLFFLLKLGA*QAVVKLLTRMD Trigger: GTCCATCCGTGTAAGCAATTTAACGACAGCTTGCAAAGCACCGAGCTTTAACAGAAAGAAGAGATGAGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS CAA 72 bp | TCCAAATCAGCAAAGATTCTTACAAGTCATCTGTGCTaGCATGTAATAATTTTCTGCCCCCTCCAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SKSAKILTSHLC*HVIIFCPLQPG Trigger: CCCAGGCTGGAGGGGGCAGAAAATTATTACATGCAAGCACAGATGACTTGTAAGAATCTTTGCTGATTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656652.1 |
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| CDS CAA 72 bp | ATAGGTGATGGGCAGGTCTTTCCAGCTAAGATACGTTaGGATTTGACAGTGCAATACAGTGACCTTAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: IGDGQVFPAKIR*DLTVQYSDLSY Trigger: GTAACTAAGGTCACTGTATTGCACTGTCAAATCCAAACGTATCTTAGCTGGAAAGACCTGCCCATCACCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418746.1 |
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| CDS TCA 72 bp | CACCATTGTCATTTAAAGGGTGAGCTGTATTTCTTCTaGAGTAAAGTGATGAGTCCAGGCAGTACACTCACT | + |
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Preference number: 6 (lower is better) Translates to: HHCHLKGELYFF*SKVMSPGSTLT Trigger: AGTGAGTGTACTGCCTGGACTCATCACTTTACTTCAGAAGAAATACAGCTCACCCTTTAAATGACAATGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413792.5 ENST00000446799.6 ENST00000655948.1 |
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| CDS CCA 72 bp | ATTAAGTCTACACCACATCACGCATCCCCTGACAGATaGAGAGAATATCAGCAAATCAGATTGCTTTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: IKSTPHHASPDR*REYQQIRLLSK Trigger: TTTAGAAAGCAATCTGATTTGCTGATATTCTCTCCATCTGTCAGGGGATGCGTGATGTGGTGTAGACTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413792.5 ENST00000655948.1 |
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| CDS CAA 72 bp | AAGGTGGTTAGGGTCCTTCCATGCCATGTAGAGACTTaGATCTTCATCAGGCGTTTGTTTTGTTTTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: KVVRVLPCHVET*IFIRRLFCFSL Trigger: TAAAGAAAAACAAAACAAACGCCTGATGAAGATCAAAGTCTCTACATGGCATGGAAGGACCCTAACCACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659701.1 |
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| CDS CAA 72 bp | GTAATTTTCTCTCCTTGGTTATGTGCTGAAGTTGACTaGCTTCTCTTAGTTGATCTTCTTGCCATTGCATGT | + |
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Preference number: 6 (lower is better) Translates to: VIFSPWLCAEVD*LLLVDLLAIAC Trigger: ACATGCAATGGCAAGAAGATCAACTAAGAGAAGCAAGTCAACTTCAGCACATAACCAAGGAGAGAAAATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655678.1 |
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