Pregenerated sensors for LINC00207 (Homo sapiens)
Ensembl gene IDs: ENSG00000187012Ensembl transcript IDs: ENST00000334566.9, ENST00000460077.1, ENST00000603530.5, ENST00000605505.1, ENST00000657777.1, ENST00000666755.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCGGCTCCCGGGGGATAGGAAGGCGGTTTTGCCTGGCCCTGGGCTaGGGCAGTGCTGGAGCCTCACCTGTATCAGTGTGGCCGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LGSRGIGRRFCLALG*GSAGASPVSVWPLH Trigger: GTGGAGCGGCCACACTGATACAGGTGAGGCTCCAGCACTGCCGCAGCCCAGGGCCAGGCAAAACCGCCTTCCTATCCCCCGGGAGCCGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 90 bp | GCCGATCTCGGAGGCCTCGGCTCCCGGGGGATAGGAAGGCGGTTTTaGCTGGCCCTGGGCTGCGGCAGTGCTGGAGCCTCACCTGTATCA | + |
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Preference number: 5 (lower is better) Translates to: ADLGGLGSRGIGRRF*LALGCGSAGASPVS Trigger: TGATACAGGTGAGGCTCCAGCACTGCCGCAGCCCAGGGCCAGGCAAAACCGCCTTCCTATCCCCCGGGAGCCGAGGCCTCCGAGATCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 90 bp | CCGGGGGATAGGAAGGCGGTTTTGCCTGGCCCTGGGCTGCGGCAGTaGTGGAGCCTCACCTGTATCAGTGTGGCCGCTCCACTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PGDRKAVLPGPGLRQ*WSLTCISVAAPLCW Trigger: CCAGCAGAGTGGAGCGGCCACACTGATACAGGTGAGGCTCCAGCACTGCCGCAGCCCAGGGCCAGGCAAAACCGCCTTCCTATCCCCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 90 bp | AGGTCTTCCCCGGTGCCCTGTGCAAACATGGGGGCAGGTGGGTGGTaGATGGCAGACCTGGTGTTCCTGGACATGGAGGCAGCCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: RSSPVPCANMGAGGW*MADLVFLDMEAAHG Trigger: GCCATGGGCTGCCTCCATGTCCAGGAACACCAGGTCTGCCATGCACCACCCACCTGCCCCCATGTTTGCACAGGGCACCGGGGAAGACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666755.1 |
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| CDS CCA 90 bp | CTGGCCCTGGGCTGCGGCAGTGCTGGAGCCTCACCTGTATCAGTGTaGCCGCTCCACTCTGCTGGCTGTTCACTCATCGCCACTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LALGCGSAGASPVSV*PLHSAGCSLIATAV Trigger: CACAGCAGTGGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGCCACACTGATACAGGTGAGGCTCCAGCACTGCCGCAGCCCAGGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 90 bp | CGGCAGTGCTGGAGCCTCACCTGTATCAGTGTGGCCGCTCCACTCTaGTGGCTGTTCACTCATCGCCACTGCTGTGGTTCCAGCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RQCWSLTCISVAAPL*WLFTHRHCCGSSRE Trigger: CTCCCGGCTGGAACCACAGCAGTGGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGCCACACTGATACAGGTGAGGCTCCAGCACTGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 90 bp | TTGAGTTTTCACGGCCAGGGACCCTGCTCTGAGGTCCGTGTGATTTaGCTGCACTGTGCGACCTCCCAGCGCCGATCTCGGAGGCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: LSFHGQGPCSEVRVI*LHCATSQRRSRRPR Trigger: CCGAGGCCTCCGAGATCGGCGCTGGGAGGTCGCACAGTGCAGGCAAATCACACGGACCTCAGAGCAGGGTCCCTGGCCGTGAAAACTCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 90 bp | CAGTGCTGGAGCCTCACCTGTATCAGTGTGGCCGCTCCACTCTGCTaGCTGTTCACTCATCGCCACTGCTGTGGTTCCAGCCGGGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: QCWSLTCISVAAPLC*LFTHRHCCGSSREQ Trigger: TTGCTCCCGGCTGGAACCACAGCAGTGGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGCCACACTGATACAGGTGAGGCTCCAGCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 90 bp | TGGGTAGGGCTGTGGCAAAAGTTCCATGGCATGAGGTGCGAAGAGTaGTCACCTAGGCCGGCACATCATGGGCTCTCTGGGGACATGGAC | + |
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Preference number: 5 (lower is better) Translates to: WVGLWQKFHGMRCEE*SPRPAHHGLSGDMD Trigger: GTCCATGTCCCCAGAGAGCCCATGATGTGCCGGCCTAGGTGAGCACTCTTCGCACCTCATGCCATGGAACTTTTGCCACAGCCCTACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666755.1 |
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| CDS GCA 90 bp | TCCGTAAAGTGGGTAGGGCTGTGGCAAAAGTTCCATGGCATGAGGTaGGAAGAGTGCTCACCTAGGCCGGCACATCATGGGCTCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SVKWVGLWQKFHGMR*EECSPRPAHHGLSG Trigger: CCCAGAGAGCCCATGATGTGCCGGCCTAGGTGAGCACTCTTCGCACCTCATGCCATGGAACTTTTGCCACAGCCCTACCCACTTTACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666755.1 |
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| CDS CCA 90 bp | CCCATGTCACACGCCTCCCTCAAGGTAGAGGACATTTCTGCCAGCTaGAAAATCTCTCACCAGGTCACCCTCCCATCTGATCCCCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: PMSHASLKVEDISAS*KISHQVTLPSDPRL Trigger: GAGACGGGGATCAGATGGGAGGGTGACCTGGTGAGAGATTTTCCAGCTGGCAGAAATGTCCTCTACCTTGAGGGAGGCGTGTGACATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334566.9 ENST00000657777.1 |
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| CDS CCA 90 bp | TGTGGCCGCTCCACTCTGCTGGCTGTTCACTCATCGCCACTGCTGTaGTTCCAGCCGGGAGCAACAGCATCATTATCTTCAAGATGCAGC | + |
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Preference number: 5 (lower is better) Translates to: CGRSTLLAVHSSPLL*FQPGATASLSSRCS Trigger: GCTGCATCTTGAAGATAATGATGCTGTTGCTCCCGGCTGGAACCACAGCAGTGGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 90 bp | CTGACCCCCACGCCTTACCAGCCCATCATGCACGGTGTTCCCCTCTaGTTCAGTGATTGGATCCCAAGCAGGATGTGTAACCATCCATTC | + |
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Preference number: 5 (lower is better) Translates to: LTPTPYQPIMHGVPL*FSDWIPSRMCNHPF Trigger: GAATGGATGGTTACACATCCTGCTTGGGATCCAATCACTGAACCAGAGGGGAACACCGTGCATGATGGGCTGGTAAGGCGTGGGGGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000460077.1 ENST00000603530.5 |
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| CDS GCA 90 bp | ATCAGTGTGGCCGCTCCACTCTGCTGGCTGTTCACTCATCGCCACTaGTGTGGTTCCAGCCGGGAGCAACAGCATCATTATCTTCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: ISVAAPLCWLFTHRH*CGSSREQQHHYLQD Trigger: ATCTTGAAGATAATGATGCTGTTGCTCCCGGCTGGAACCACAGCAGTGGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGCCACACTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 90 bp | TCCGTAAAGTGGGTAGGGCAGCCCATCATGCACGGTGTTCCCCTCTaGTTCAGTGATTGGATCCCAAGCAGGATGTGTAACCATCCATTC | + |
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Preference number: 5 (lower is better) Translates to: SVKWVGQPIMHGVPL*FSDWIPSRMCNHPF Trigger: GAATGGATGGTTACACATCCTGCTTGGGATCCAATCACTGAACCAGAGGGGAACACCGTGCATGATGGGCTGCCCTACCCACTTTACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334566.9 ENST00000605505.1 |
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| CDS GCA 90 bp | CTGCTGTGGTTCCAGCCGGGAGCAACAGCATCATTATCTTCAAGATaGAGCAGCAGGAGTCTTCATCTGATTCTGAGCCTCACGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LLWFQPGATASLSSR*SSRSLHLILSLTSQ Trigger: CTGAGACGTGAGGCTCAGAATCAGATGAAGACTCCTGCTGCTGCATCTTGAAGATAATGATGCTGTTGCTCCCGGCTGGAACCACAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000334566.9 ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 90 bp | CCATTCTCCTCTTTAAACAGAACATTTTGGAGACTGGAAACCTGGTaGATGAGCCGTAACCCACTAGGTGAGCTTGAGAAGCTGAAACAT | + |
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Preference number: 5 (lower is better) Translates to: PFSSLNRTFWRLETW*MSRNPLGELEKLKH Trigger: ATGTTTCAGCTTCTCAAGCTCACCTAGTGGGTTACGGCTCATCCACCAGGTTTCCAGTCTCCAAAATGTTCTGTTTAAAGAGGAGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460077.1 |
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| CDS CCA 90 bp | CATCCATTCTCCTCTTTAAACAGAACATTTTGGAGACTGGAAACCTaGTGGATGAGCCGTAACCCACTAGGTGAGCTTGAGAAGCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: HPFSSLNRTFWRLET*WMSRNPLGELEKLK Trigger: TTTCAGCTTCTCAAGCTCACCTAGTGGGTTACGGCTCATCCACCAGGTTTCCAGTCTCCAAAATGTTCTGTTTAAAGAGGAGAATGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460077.1 |
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| CDS CAA 72 bp | CGGAGGCCTCGGCTCCCGGGGGATAGGAAGGCGGTTTaGCCTGGCCCTGGGCTGCGGCAGTGCTGGAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRPRLPGDRKAV*PGPGLRQCWSL Trigger: GAGGCTCCAGCACTGCCGCAGCCCAGGGCCAGGCAAAACCGCCTTCCTATCCCCCGGGAGCCGAGGCCTCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 72 bp | GGAGGCCTCGGCTCCCGGGGGATAGGAAGGCGGTTTTaGCTGGCCCTGGGCTGCGGCAGTGCTGGAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GGLGSRGIGRRF*LALGCGSAGAS Trigger: TGAGGCTCCAGCACTGCCGCAGCCCAGGGCCAGGCAAAACCGCCTTCCTATCCCCCGGGAGCCGAGGCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CAA 90 bp | CGCCGATCTCGGAGGCCTCGGCTCCCGGGGGATAGGAAGGCGGTTTaGCCTGGCCCTGGGCTGCGGCAGTGCTGGAGCCTCACCTGTATC | + |
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Preference number: 6 (lower is better) Translates to: RRSRRPRLPGDRKAV*PGPGLRQCWSLTCI Trigger: GATACAGGTGAGGCTCCAGCACTGCCGCAGCCCAGGGCCAGGCAAAACCGCCTTCCTATCCCCCGGGAGCCGAGGCCTCCGAGATCGGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 72 bp | CACGGCCAGGGACCCTGCTCTGAGGTCCGTGTGATTTaGCTGCACTGTGCGACCTCCCAGCGCCGATCTCGG | + |
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Preference number: 6 (lower is better) Translates to: HGQGPCSEVRVI*LHCATSQRRSR Trigger: CCGAGATCGGCGCTGGGAGGTCGCACAGTGCAGGCAAATCACACGGACCTCAGAGCAGGGTCCCTGGCCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 72 bp | AGGAAGGCGGTTTTGCCTGGCCCTGGGCTGCGGCAGTaGTGGAGCCTCACCTGTATCAGTGTGGCCGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RKAVLPGPGLRQ*WSLTCISVAAP Trigger: TGGAGCGGCCACACTGATACAGGTGAGGCTCCAGCACTGCCGCAGCCCAGGGCCAGGCAAAACCGCCTTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 72 bp | CGGGGGATAGGAAGGCGGTTTTGCCTGGCCCTGGGCTaGGGCAGTGCTGGAGCCTCACCTGTATCAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: RGIGRRFCLALG*GSAGASPVSVW Trigger: CCACACTGATACAGGTGAGGCTCCAGCACTGCCGCAGCCCAGGGCCAGGCAAAACCGCCTTCCTATCCCCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 72 bp | GGCTGCGGCAGTGCTGGAGCCTCACCTGTATCAGTGTaGCCGCTCCACTCTGCTGGCTGTTCACTCATCGCC | + |
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Preference number: 6 (lower is better) Translates to: GCGSAGASPVSV*PLHSAGCSLIA Trigger: GGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGCCACACTGATACAGGTGAGGCTCCAGCACTGCCGCAGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 72 bp | AGGGCTGAAGGTCTTCCCCGGTGCCCTGTGCAAACATaGGGGCAGGTGGGTGGTGCATGGCAGACCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RAEGLPRCPVQT*GQVGGAWQTWC Trigger: ACACCAGGTCTGCCATGCACCACCCACCTGCCCCCATGTTTGCACAGGGCACCGGGGAAGACCTTCAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666755.1 |
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| CDS TCA 72 bp | GTTTTCACGGCCAGGGACCCTGCTCTGAGGTCCGTGTaGTTTGCCTGCACTGTGCGACCTCCCAGCGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: VFTARDPALRSV*FACTVRPPSAD Trigger: ATCGGCGCTGGGAGGTCGCACAGTGCAGGCAAATCACACGGACCTCAGAGCAGGGTCCCTGGCCGTGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657777.1 ENST00000666755.1 |
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| CDS TCA 72 bp | TCTCAGCTCGACGCCTCCTTCTGTGTCATGCTGTACTaGCCCCCACGCCTTACCAGCCCATCATGCACGGTG | + |
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Preference number: 6 (lower is better) Translates to: SQLDASFCVMLY*PPRLTSPSCTV Trigger: CACCGTGCATGATGGGCTGGTAAGGCGTGGGGGTCAGTACAGCATGACACAGAAGGAGGCGTCGAGCTGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460077.1 |
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| CDS GCA 72 bp | TGGAGCCTCACCTGTATCAGTGTGGCCGCTCCACTCTaGTGGCTGTTCACTCATCGCCACTGCTGTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: WSLTCISVAAPL*WLFTHRHCCGS Trigger: GGAACCACAGCAGTGGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGCCACACTGATACAGGTGAGGCTCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 72 bp | TCACGTCTCAGAGCAGAACTGACTCCCGCTGGGAGGTaGGGCTGCATCCTCTTTGTGAAGCAGTCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SRLRAELTPAGR*GCILFVKQSSL Trigger: CAGGCTGGACTGCTTCACAAAGAGGATGCAGCCCCACCTCCCAGCGGGAGTCAGTTCTGCTCTGAGACGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000334566.9 ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 72 bp | AGCCTCACCTGTATCAGTGTGGCCGCTCCACTCTGCTaGCTGTTCACTCATCGCCACTGCTGTGGTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLTCISVAAPLC*LFTHRHCCGSS Trigger: GCTGGAACCACAGCAGTGGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGCCACACTGATACAGGTGAGGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 72 bp | GCCGCTCCACTCTGCTGGCTGTTCACTCATCGCCACTaGTGTGGTTCCAGCCGGGAGCAACAGCATCATTAT | + |
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Preference number: 6 (lower is better) Translates to: AAPLCWLFTHRH*CGSSREQQHHY Trigger: ATAATGATGCTGTTGCTCCCGGCTGGAACCACAGCAGTGGCGATGAGTGAACAGCCAGCAGAGTGGAGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 72 bp | CTGTGGCAAAAGTTCCATGGCATGAGGTGCGAAGAGTaGTCACCTAGGCCGGCACATCATGGGCTCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LWQKFHGMRCEE*SPRPAHHGLSG Trigger: CCCAGAGAGCCCATGATGTGCCGGCCTAGGTGAGCACTCTTCGCACCTCATGCCATGGAACTTTTGCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666755.1 |
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| CDS GCA 72 bp | TGGGTAGGGCTGTGGCAAAAGTTCCATGGCATGAGGTaGGAAGAGTGCTCACCTAGGCCGGCACATCATGGG | + |
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Preference number: 6 (lower is better) Translates to: WVGLWQKFHGMR*EECSPRPAHHG Trigger: CCCATGATGTGCCGGCCTAGGTGAGCACTCTTCGCACCTCATGCCATGGAACTTTTGCCACAGCCCTACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666755.1 |
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| CDS TCA 72 bp | GTGTCTTTTGAGTTTTCACGGCCAGGGACCCTGCTCTaGGGTCCGTGTGATTTGCCTGCACTGTGCGACCTC | + |
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Preference number: 6 (lower is better) Translates to: VSFEFSRPGTLL*GPCDLPALCDL Trigger: GAGGTCGCACAGTGCAGGCAAATCACACGGACCTCAGAGCAGGGTCCCTGGCCGTGAAAACTCAAAAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657777.1 ENST00000666755.1 |
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| CDS TCA 72 bp | TGCATCCTCTTTGTGAAGCAGTCCAGCCTGCTCTGCTaGCAGGACGTCCCTCCAGATGTCCAGAGGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: CILFVKQSSLLC*QDVPPDVQRKF Trigger: GAACTTCCTCTGGACATCTGGAGGGACGTCCTGTCAGCAGAGCAGGCTGGACTGCTTCACAAAGAGGATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000334566.9 ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 72 bp | CATGTCACACGCCTCCCTCAAGGTAGAGGACATTTCTaGCAGCTGGAAAATCTCTCACCAGGTCACCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: HVTRLPQGRGHF*QLENLSPGHPP Trigger: GGGAGGGTGACCTGGTGAGAGATTTTCCAGCTGGCAGAAATGTCCTCTACCTTGAGGGAGGCGTGTGACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334566.9 ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 |
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| CDS GCA 72 bp | CCCTCCAGATGTCCAGAGGAAGTTCCAGAGGAAGTCTaGCAGCTTCATCTCCCGAGCCTCCATTTCCTCATC | + |
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Preference number: 6 (lower is better) Translates to: PSRCPEEVPEEV*QLHLPSLHFLI Trigger: GATGAGGAAATGGAGGCTCGGGAGATGAAGCTGGCAGACTTCCTCTGGAACTTCCTCTGGACATCTGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000334566.9 ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS GCA 72 bp | AGACTGTGTCTTTTGAGTTTTCACGGCCAGGGACCCTaGTCTGAGGTCCGTGTGATTTGCCTGCACTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: RLCLLSFHGQGP*SEVRVICLHCA Trigger: CGCACAGTGCAGGCAAATCACACGGACCTCAGAGCAGGGTCCCTGGCCGTGAAAACTCAAAAGACACAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 72 bp | TGGGTAGGGCAGCCCATCATGCACGGTGTTCCCCTCTaGTTCAGTGATTGGATCCCAAGCAGGATGTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: WVGQPIMHGVPL*FSDWIPSRMCN Trigger: GTTACACATCCTGCTTGGGATCCAATCACTGAACCAGAGGGGAACACCGTGCATGATGGGCTGCCCTACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334566.9 ENST00000605505.1 |
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| CDS GCA 72 bp | TTCCTCATCCGTAAAGTGGGTAGGGCTTCTGTGTCATaGTGTACTGACCCCCACGCCTTACCAGCCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: FLIRKVGRASVS*CTDPHALPAHH Trigger: ATGATGGGCTGGTAAGGCGTGGGGGTCAGTACAGCATGACACAGAAGCCCTACCCACTTTACGGATGAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603530.5 |
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| CDS CCA 72 bp | CACGCCTCCCTCAAGGTAGAGGACATTTCTGCCAGCTaGAAAATCTCTCACCAGGTCACCCTCCCATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: HASLKVEDISAS*KISHQVTLPSD Trigger: ATCAGATGGGAGGGTGACCTGGTGAGAGATTTTCCAGCTGGCAGAAATGTCCTCTACCTTGAGGGAGGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334566.9 ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 |
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| CDS CCA 72 bp | ACGCCTTACCAGCCCATCATGCACGGTGTTCCCCTCTaGTTCAGTGATTGGATCCCAAGCAGGATGTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: TPYQPIMHGVPL*FSDWIPSRMCN Trigger: GTTACACATCCTGCTTGGGATCCAATCACTGAACCAGAGGGGAACACCGTGCATGATGGGCTGGTAAGGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460077.1 ENST00000603530.5 |
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| CDS GCA 72 bp | TTCCAGCCGGGAGCAACAGCATCATTATCTTCAAGATaGAGCAGCAGGAGTCTTCATCTGATTCTGAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FQPGATASLSSR*SSRSLHLILSL Trigger: GAGGCTCAGAATCAGATGAAGACTCCTGCTGCTGCATCTTGAAGATAATGATGCTGTTGCTCCCGGCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000334566.9 ENST00000603530.5 ENST00000605505.1 ENST00000657777.1 ENST00000666755.1 |
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| CDS CCA 72 bp | TCCTCTTTAAACAGAACATTTTGGAGACTGGAAACCTaGTGGATGAGCCGTAACCCACTAGGTGAGCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSLNRTFWRLET*WMSRNPLGELE Trigger: CTCAAGCTCACCTAGTGGGTTACGGCTCATCCACCAGGTTTCCAGTCTCCAAAATGTTCTGTTTAAAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460077.1 |
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| CDS CCA 72 bp | TCTTTAAACAGAACATTTTGGAGACTGGAAACCTGGTaGATGAGCCGTAACCCACTAGGTGAGCTTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLNRTFWRLETW*MSRNPLGELEK Trigger: CTTCTCAAGCTCACCTAGTGGGTTACGGCTCATCCACCAGGTTTCCAGTCTCCAAAATGTTCTGTTTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460077.1 |
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