Pregenerated sensors for LINC00200 (Homo sapiens)
Ensembl gene IDs: ENSG00000229205Ensembl transcript IDs: ENST00000425630.2, ENST00000583117.1, ENST00000647993.1, ENST00000652683.1, ENST00000655745.1, ENST00000666348.1
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCAGCACTTGCTGGGGCACGTTCCCTGGGATGGCGCAGCCACACCTaGGGGGCTGGAGCCTACCTTTGCTGCTGGACGCTGCTCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: PALAGARSLGWRSHT*GAGAYLCCWTLLST Trigger: GGTGCTGAGCAGCGTCCAGCAGCAAAGGTAGGCTCCAGCCCCGCAGGTGTGGCTGCGCCATCCCAGGGAACGTGCCCCAGCAAGTGCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 90 bp | GCAGCCACACCTGCGGGGCTGGAGCCTACCTTTGCTGCTGGACGCTaGTCAGCACCCAGCCCTCCTGCTTTCCTTGGGAGGCTTCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AATPAGLEPTFAAGR*SAPSPPAFLGRLPG Trigger: GCCTGGAAGCCTCCCAAGGAAAGCAGGAGGGCTGGGTGCTGAGCAGCGTCCAGCAGCAAAGGTAGGCTCCAGCCCCGCAGGTGTGGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 90 bp | CTGGGATGGCGCAGCCACACCTGCGGGGCTGGAGCCTACCTTTGCTaGTGGACGCTGCTCAGCACCCAGCCCTCCTGCTTTCCTTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LGWRSHTCGAGAYLC*WTLLSTQPSCFPWE Trigger: CTCCCAAGGAAAGCAGGAGGGCTGGGTGCTGAGCAGCGTCCAGCAGCAAAGGTAGGCTCCAGCCCCGCAGGTGTGGCTGCGCCATCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 90 bp | AGAACCCGCGTGGACCCAGCAGCCAGACCGCACACCCACGTGATGTaGCCTGGAAAGTGCCTGCCGTGGGTCCAGAGGGCAAGAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: RTRVDPAARPHTHVM*PGKCLPWVQRARGE Trigger: CTCACCTCTTGCCCTCTGGACCCACGGCAGGCACTTTCCAGGGCACATCACGTGGGTGTGCGGTCTGGCTGCTGGGTCCACGCGGGTTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS CCA 90 bp | GTAGTGAGAGCAGCACCAGCACTTGCTGGGGCACGTTCCCTGGGATaGCGCAGCCACACCTGCGGGGCTGGAGCCTACCTTTGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VVRAAPALAGARSLG*RSHTCGAGAYLCCW Trigger: CCAGCAGCAAAGGTAGGCTCCAGCCCCGCAGGTGTGGCTGCGCCATCCCAGGGAACGTGCCCCAGCAAGTGCTGGTGCTGCTCTCACTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 90 bp | GACCCAGCAGCCAGACCGCACACCCACGTGATGTGCCCTGGAAAGTaGCTGCCGTGGGTCCAGAGGGCAAGAGGTGAGGAAGTGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: DPAARPHTHVMCPGK*LPWVQRARGEEVPP Trigger: AGGTGGCACTTCCTCACCTCTTGCCCTCTGGACCCACGGCAGGCACTTTCCAGGGCACATCACGTGGGTGTGCGGTCTGGCTGCTGGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 90 bp | CCCAGCCGTCTCCAGCATAGCAGCCCAGCTCGTCACCTCGGAAAGTaGCTTAGCTCTCTGCTGTCAGCCCACATTGCTGCAGCTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSRLQHSSPARHLGK*LSSLLSAHIAAAPR Trigger: CCTGGGAGCTGCAGCAATGTGGGCTGACAGCAGAGAGCTAAGGCACTTTCCGAGGTGACGAGCTGGGCTGCTATGCTGGAGACGGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | AGCCCTCCTGCTTTCCTTGGGAGGCTTCCAGGCCCTTGGATGACTTaGTGGGACCATTTCTTGCCACAGGAGCCAGAGGGTCCAGACGGC | + |
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Preference number: 5 (lower is better) Translates to: SPPAFLGRLPGPWMT*WDHFLPQEPEGPDG Trigger: GCCGTCTGGACCCTCTGGCTCCTGTGGCAAGAAATGGTCCCATCAAGTCATCCAAGGGCCTGGAAGCCTCCCAAGGAAAGCAGGAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | CACCCAGCCCTCCTGCTTTCCTTGGGAGGCTTCCAGGCCCTTGGATaGCTTGATGGGACCATTTCTTGCCACAGGAGCCAGAGGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: HPALLLSLGGFQALG*LDGTISCHRSQRVQ Trigger: CTGGACCCTCTGGCTCCTGTGGCAAGAAATGGTCCCATCAAGTCATCCAAGGGCCTGGAAGCCTCCCAAGGAAAGCAGGAGGGCTGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | GATGTGCCCTGGAAAGTGCCTGCCGTGGGTCCAGAGGGCAAGAGGTaGGGAAGTGCCACCTGTCCAGTGAAACCAACCCCACCTGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: DVPWKVPAVGPEGKR*GSATCPVKPTPPVV Trigger: CACTACAGGTGGGGTTGGTTTCACTGGACAGGTGGCACTTCCTCACCTCTTGCCCTCTGGACCCACGGCAGGCACTTTCCAGGGCACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS TCA 90 bp | AGTAGTCGGCATGGTGCTGAGCACCCTCCGGGAACCGTCCCTACCTaGAATATGGGTGTGATGTACGGAGCACACGCAGCCACCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SSRHGAEHPPGTVPT*NMGVMYGAHAATLQ Trigger: CTGCAGGGTGGCTGCGTGTGCTCCGTACATCACACCCATATTTCAGGTAGGGACGGTTCCCGGAGGGTGCTCAGCACCATGCCGACTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583117.1 |
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| CDS GCA 90 bp | CTGGAAAGTGCCTGCCGTGGGTCCAGAGGGCAAGAGGTGAGGAAGTaGCACCTGTCCAGTGAAACCAACCCCACCTGTAGTGAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LESACRGSRGQEVRK*HLSSETNPTCSESS Trigger: GCTGCTCTCACTACAGGTGGGGTTGGTTTCACTGGACAGGTGGCACTTCCTCACCTCTTGCCCTCTGGACCCACGGCAGGCACTTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS CCA 90 bp | GGACCACAGTACCCGGAGCCCTGGGCCCTGCACGGGGTCCTTTCCTaGGCCTTGTTTTCTGGCATCTCCAAATCTGAGAACGGGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: GPQYPEPWALHGVLS*ALFSGISKSENGHL Trigger: AAGATGCCCGTTCTCAGATTTGGAGATGCCAGAAAACAAGGCCCAGGAAAGGACCCCGTGCAGGGCCCAGGGCTCCGGGTACTGTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS TCA 90 bp | CACTGTGCCCTGACATGGTGGGTACATGTGGAGCACACCCACTTCTaGCAGCCGACTGGGGCCACAAGTGGGACCAAGAAAATGTGCGCC | + |
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Preference number: 5 (lower is better) Translates to: HCALTWWVHVEHTHF*QPTGATSGTKKMCA Trigger: GGCGCACATTTTCTTGGTCCCACTTGTGGCCCCAGTCGGCTGTCAGAAGTGGGTGTGCTCCACATGTACCCACCATGTCAGGGCACAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | GCGTCTCAGAGGCAGCACGCATTGTGGGGCCTCATGGAACTAGTGTaGCTTCCAGACCCACAACTTACTGCCTGTGTGCTGGGCAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: ASQRQHALWGLMELV*LPDPQLTACVLGKE Trigger: CTCCTTGCCCAGCACACAGGCAGTAAGTTGTGGGTCTGGAAGTCACACTAGTTCCATGAGGCCCCACAATGCGTGCTGCCTCTGAGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS GCA 90 bp | AGCATAGCAGCCCAGCTCGTCACCTCGGAAAGTGCCTTAGCTCTCTaGTGTCAGCCCACATTGCTGCAGCTCCCAGGCCCTGATATCCTA | + |
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Preference number: 5 (lower is better) Translates to: SIAAQLVTSESALAL*CQPTLLQLPGPDIL Trigger: TAGGATATCAGGGCCTGGGAGCTGCAGCAATGTGGGCTGACAGCAGAGAGCTAAGGCACTTTCCGAGGTGACGAGCTGGGCTGCTATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | TGGGGCCTCTGGTCAACATCAAGGCACCTGCTGAGGTGTGAAATGTaGGCACTGTGCCCTGACATGGTGGGTACATGTGGAGCACACCCA | + |
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Preference number: 5 (lower is better) Translates to: WGLWSTSRHLLRCEM*ALCPDMVGTCGAHP Trigger: TGGGTGTGCTCCACATGTACCCACCATGTCAGGGCACAGTGCTCACATTTCACACCTCAGCAGGTGCCTTGATGTTGACCAGAGGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | GCACGGGGTCCTTTCCTGGGCCTTGTTTTCTGGCATCTCCAAATCTaGGAACGGGCATCTTACGTCCCGAGGAGGGCCACACTGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: ARGPFLGLVFWHLQI*ERASYVPRRATLLN Trigger: ATTCAGCAGTGTGGCCCTCCTCGGGACGTAAGATGCCCGTTCTCAGATTTGGAGATGCCAGAAAACAAGGCCCAGGAAAGGACCCCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS GCA 90 bp | CCAATTCATCTAAGAGGCAGCATTTGCCATGGCAGGCCTCCTACCTaGAGGCTCATCTCATCTGAGGGTGGGAGCTGTGACCAAGGCATC | + |
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Preference number: 5 (lower is better) Translates to: PIHLRGSICHGRPPT*RLISSEGGSCDQGI Trigger: GATGCCTTGGTCACAGCTCCCACCCTCAGATGAGATGAGCCTGCAGGTAGGAGGCCTGCCATGGCAAATGCTGCCTCTTAGATGAATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 90 bp | GAGGGCCACACTGCTGAATTTCCTCCCAGCCTTTGGTCTGTCCTCTaGTCTCAGAGTCAAGGGAAGAAGCCAAATCCCTCAACCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: EGHTAEFPPSLWSVL*SQSQGKKPNPSTAP Trigger: AGGAGCGGTTGAGGGATTTGGCTTCTTCCCTTGACTCTGAGACCAGAGGACAGACCAAAGGCTGGGAGGAAATTCAGCAGTGTGGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CCA 90 bp | TTACGTCCCGAGGAGGGCCACACTGCTGAATTTCCTCCCAGCCTTTaGTCTGTCCTCTGGTCTCAGAGTCAAGGGAAGAAGCCAAATCCC | + |
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Preference number: 5 (lower is better) Translates to: LRPEEGHTAEFPPSL*SVLWSQSQGKKPNP Trigger: GGGATTTGGCTTCTTCCCTTGACTCTGAGACCAGAGGACAGACCAAAGGCTGGGAGGAAATTCAGCAGTGTGGCCCTCCTCGGGACGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS TCA 90 bp | CTTAGCTCTCTGCTGTCAGCCCACATTGCTGCAGCTCCCAGGCCCTaGTATCCTAACAGCACGTTCCCTTTGGTAATTGGCCAGCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: LSSLLSAHIAAAPRP*YPNSTFPLVIGQQL Trigger: AAGCTGCTGGCCAATTACCAAAGGGAACGTGCTGTTAGGATATCAGGGCCTGGGAGCTGCAGCAATGTGGGCTGACAGCAGAGAGCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | CGGCCCCTCCCCAATGACACAGTGAGAAGGGAGGTGGCATGTGAATaGACCCTGACCTCTGAGATGCTCACTCCTGAAACTGTGACTCTT | + |
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Preference number: 5 (lower is better) Translates to: RPLPNDTVRREVACE*TLTSEMLTPETVTL Trigger: AAGAGTCACAGTTTCAGGAGTGAGCATCTCAGAGGTCAGGGTTCATTCACATGCCACCTCCCTTCTCACTGTGTCATTGGGGAGGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | AGAACGCATCGTCTTCACAAGATGGTCATCTTGGAGAGGCAGAGCTaGGAAAGACTCCACTCCTCGGAAGCGTGGCTGGTGAAAGTCCGC | + |
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Preference number: 5 (lower is better) Translates to: RTHRLHKMVILERQS*ERLHSSEAWLVKVR Trigger: GCGGACTTTCACCAGCCACGCTTCCGAGGAGTGGAGTCTTTCTCAGCTCTGCCTCTCCAAGATGACCATCTTGTGAAGACGATGCGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 90 bp | AAATCTGAGAACGGGCATCTTACGTCCCGAGGAGGGCCACACTGCTaGATTTCCTCCCAGCCTTTGGTCTGTCCTCTGGTCTCAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: KSENGHLTSRGGPHC*ISSQPLVCPLVSES Trigger: TGACTCTGAGACCAGAGGACAGACCAAAGGCTGGGAGGAAATTCAGCAGTGTGGCCCTCCTCGGGACGTAAGATGCCCGTTCTCAGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CCA 90 bp | ACATGTGGAGCACACCCACTTCTGACAGCCGACTGGGGCCACAAGTaGGACCAAGAAAATGTGCGCCTATCTCAACTTTGGTCCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: TCGAHPLLTADWGHK*DQENVRLSQLWSCV Trigger: CACACAGGACCAAAGTTGAGATAGGCGCACATTTTCTTGGTCCCACTTGTGGCCCCAGTCGGCTGTCAGAAGTGGGTGTGCTCCACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | GACATGGTGGGTACATGTGGAGCACACCCACTTCTGACAGCCGACTaGGGCCACAAGTGGGACCAAGAAAATGTGCGCCTATCTCAACTT | + |
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Preference number: 5 (lower is better) Translates to: DMVGTCGAHPLLTAD*GHKWDQENVRLSQL Trigger: AAGTTGAGATAGGCGCACATTTTCTTGGTCCCACTTGTGGCCCCAGTCGGCTGTCAGAAGTGGGTGTGCTCCACATGTACCCACCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | TCAGAGTGCCTCGGCATCCTCTGTCAGAAACCCCTATTCAGGGAGTaGGGAAAGGGCTTAAGACCCACAGAAGTACCCCGTGGTCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: SECLGILCQKPLFRE*GKGLRPTEVPRGLD Trigger: ATCAAGACCACGGGGTACTTCTGTGGGTCTTAAGCCCTTTCCCCACTCCCTGAATAGGGGTTTCTGACAGAGGATGCCGAGGCACTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS TCA 90 bp | GAAAGGAAGGTCTGGGTTAGGATAAGGGGTGTGGAGACCAGGGTTTaGCCATGCAGATCTCTGGGTAGCAGGCTTTGGAGGGAACAGATG | + |
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Preference number: 5 (lower is better) Translates to: ERKVWVRIRGVETRV*PCRSLGSRLWREQM Trigger: CATCTGTTCCCTCCAAAGCCTGCTACCCAGAGATCTGCATGGTCAAACCCTGGTCTCCACACCCCTTATCCTAACCCAGACCTTCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS GCA 90 bp | TTTGGGGGTCATTCTCCTACCCCAATTCATCTAAGAGGCAGCATTTaGCATGGCAGGCCTCCTACCTGCAGGCTCATCTCATCTGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: FGGHSPTPIHLRGSI*HGRPPTCRLISSEG Trigger: ACCCTCAGATGAGATGAGCCTGCAGGTAGGAGGCCTGCCATGGCAAATGCTGCCTCTTAGATGAATTGGGGTAGGAGAATGACCCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS TCA 90 bp | AGCCACTCACATACGTTCCGGAAGTTTTGTTCAAAGCCCGTGCTCTaGCGGCCTCTAACACGGAGGCGTCTCTTCCAGGAATCCCAATTT | + |
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Preference number: 5 (lower is better) Translates to: SHSHTFRKFCSKPVL*RPLTRRRLFQESQF Trigger: AAATTGGGATTCCTGGAAGAGACGCCTCCGTGTTAGAGGCCGTCAGAGCACGGGCTTTGAACAAAACTTCCGGAACGTATGTGAGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CCA 90 bp | ACCTGTGACACAGCCTCAGGAGGTCCTGACGCCATGTGCCCAGTGTaGTCGGAGCACAGCTTGGTTTTATACATTTTAGAGAGAATTGAG | + |
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Preference number: 5 (lower is better) Translates to: TCDTASGGPDAMCPV*SEHSLVLYILERIE Trigger: CTCAATTCTCTCTAAAATGTATAAAACCAAGCTGTGCTCCGACCACACTGGGCACATGGCGTCAGGACCTCCTGAGGCTGTGTCACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 90 bp | GAACTTGTGTATAAAGAACGCATCGTCTTCACAAGATGGTCATCTTaGAGAGGCAGAGCTGAGAAAGACTCCACTCCTCGGAAGCGTGGC | + |
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Preference number: 5 (lower is better) Translates to: ELVYKERIVFTRWSS*RGRAEKDSTPRKRG Trigger: GCCACGCTTCCGAGGAGTGGAGTCTTTCTCAGCTCTGCCTCTCCAAGATGACCATCTTGTGAAGACGATGCGTTCTTTATACACAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | TGGGGCCACAAGTGGGACCAAGAAAATGTGCGCCTATCTCAACTTTaGTCCTGTGTGTGGAACACACACACACACACACAGAACTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: WGHKWDQENVRLSQL*SCVWNTHTHTQNLC Trigger: ACACAAGTTCTGTGTGTGTGTGTGTGTGTTCCACACACAGGACCAAAGTTGAGATAGGCGCACATTTTCTTGGTCCCACTTGTGGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | ACACACACAGAACTTGTGTATAAAGAACGCATCGTCTTCACAAGATaGTCATCTTGGAGAGGCAGAGCTGAGAAAGACTCCACTCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: THTELVYKERIVFTR*SSWRGRAEKDSTPR Trigger: CCGAGGAGTGGAGTCTTTCTCAGCTCTGCCTCTCCAAGATGACCATCTTGTGAAGACGATGCGTTCTTTATACACAAGTTCTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | TTTGACCATGCAGATCTCTGGGTAGCAGGCTTTGGAGGGAACAGATaGTCACTGTTTCTCATCGGACTCAGGTCTTTGTTGATGTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: FDHADLWVAGFGGNR*SLFLIGLRSLLMLR Trigger: CCTTAACATCAACAAAGACCTGAGTCCGATGAGAAACAGTGACCATCTGTTCCCTCCAAAGCCTGCTACCCAGAGATCTGCATGGTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS TCA 90 bp | TTCCCAGTTCCTGGGAATCTAAGATCTAGAAGTCATAGAAAGAGATaGTTTTGGGGCCTCTGGTCAACATCAAGGCACCTGCTGAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: FPVPGNLRSRSHRKR*FWGLWSTSRHLLRC Trigger: ACACCTCAGCAGGTGCCTTGATGTTGACCAGAGGCCCCAAAATCATCTCTTTCTATGACTTCTAGATCTTAGATTCCCAGGAACTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | GGTGAGAATCTATGGTTCTCCCACAAGGGCTCTGACAAAGTTTCTTaGACCCAAAAGATACTGACTGCATTTCCCAGTTCCTGGGAATCT | + |
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Preference number: 5 (lower is better) Translates to: GENLWFSHKGSDKVS*TQKILTAFPSSWES Trigger: AGATTCCCAGGAACTGGGAAATGCAGTCAGTATCTTTTGGGTCCAAGAAACTTTGTCAGAGCCCTTGTGGGAGAACCATAGATTCTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS GCA 90 bp | TTAGGTAGGAACCAGATAGAGAAGTTATTTGTCTTCCGACGGTCCTaGAGCATCACAGCCACTCACATACGTTCCGGAAGTTTTGTTCAA | + |
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Preference number: 5 (lower is better) Translates to: LGRNQIEKLFVFRRS*SITATHIRSGSFVQ Trigger: TTGAACAAAACTTCCGGAACGTATGTGAGTGGCTGTGATGCTGCAGGACCGTCGGAAGACAAATAACTTCTCTATCTGGTTCCTACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CCA 90 bp | TGGGACCAAGAAAATGTGCGCCTATCTCAACTTTGGTCCTGTGTGTaGAACACACACACACACACACAGAACTTGTGTATAAAGAACGCA | + |
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Preference number: 5 (lower is better) Translates to: WDQENVRLSQLWSCV*NTHTHTQNLCIKNA Trigger: TGCGTTCTTTATACACAAGTTCTGTGTGTGTGTGTGTGTGTTCCACACACAGGACCAAAGTTGAGATAGGCGCACATTTTCTTGGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | ATTGAGGCATCATTCAATACGTGTAGGATTGACATTGGTTCAGTCTaGAAAGACGGGACAACTCAAAGCAGCGGCTTCCAGGTCATAACA | + |
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Preference number: 5 (lower is better) Translates to: IEASFNTCRIDIGSV*KDGTTQSSGFQVIT Trigger: TGTTATGACCTGGAAGCCGCTGCTTTGAGTTGTCCCGTCTTTCCAGACTGAACCAATGTCAATCCTACACGTATTGAATGATGCCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 90 bp | GGTTTCTCTAACACGAAGCTCTTCTGTTTATCTGGTGAGAATCTATaGTTCTCCCACAAGGGCTCTGACAAAGTTTCTTGGACCCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: GFSNTKLFCLSGENL*FSHKGSDKVSWTQK Trigger: CTTTTGGGTCCAAGAAACTTTGTCAGAGCCCTTGTGGGAGAACCATAGATTCTCACCAGATAAACAGAAGAGCTTCGTGTTAGAGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | ACGGAGGCGTCTCTTCCAGGAATCCCAATTTTACTTTTTAACTCGTaGCTTATTTCACGAAGGTGCTTTGTTACAGATGGCGGAAATGTA | + |
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Preference number: 5 (lower is better) Translates to: TEASLPGIPILLFNS*LISRRCFVTDGGNV Trigger: TACATTTCCGCCATCTGTAACAAAGCACCTTCGTGAAATAAGCCACGAGTTAAAAAGTAAAATTGGGATTCCTGGAAGAGACGCCTCCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS TCA 90 bp | AAAATCTCCTTTCCCAGGATTTGTTGCCATTCTCTGACTTATCGGTaGACATCAAGGAAAAGATTGACTCTGAAGAGCCACCATCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: KISFPRICCHSLTYR*TSRKRLTLKSHHPR Trigger: TCTTGGATGGTGGCTCTTCAGAGTCAATCTTTTCCTTGATGTTCACCGATAAGTCAGAGAATGGCAACAAATCCTGGGAAAGGAGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS GCA 90 bp | TTTTCATGCACCTGGTACTCTTATTCTGTCATTCATGGCACCCAATaGAGTGCTCTGTGCATAGATGGTTTACCACATGTAGTAAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: FSCTWYSYSVIHGTQ*SALCIDGLPHVVRV Trigger: TACTCTTACTACATGTGGTAAACCATCTATGCACAGAGCACTGCATTGGGTGCCATGAATGACAGAATAAGAGTACCAGGTGCATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | TCTTTTAAGCTTTTCATGCACCTGGTACTCTTATTCTGTCATTCATaGCACCCAATGCAGTGCTCTGTGCATAGATGGTTTACCACATGT | + |
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Preference number: 5 (lower is better) Translates to: SFKLFMHLVLLFCHS*HPMQCSVHRWFTTC Trigger: ACATGTGGTAAACCATCTATGCACAGAGCACTGCATTGGGTGCCATGAATGACAGAATAAGAGTACCAGGTGCATGAAAAGCTTAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 90 bp | AGAAAGCCACACATTAATTCCATGCTACCCATTAGTACAAGTGTATaGATTCGTGTATTAAGTCCACAGGAGACTCCATGGAAGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKPHINSMLPISTSV*IRVLSPQETPWKER Trigger: TCTCTCCTTCCATGGAGTCTCCTGTGGACTTAATACACGAATCCATACACTTGTACTAATGGGTAGCATGGAATTAATGTGTGGCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652683.1 |
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| CDS TCA 90 bp | ACACATAATGATCCACCCTTGAGGAAATGGGCACACACACTACCCTaGTTGGATCATTACACAACACAGATATGCATGGAAACAACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: THNDPPLRKWAHTLP*LDHYTTQICMETTN Trigger: ATTTGTTGTTTCCATGCATATCTGTGTTGTGTAATGATCCAATCAGGGTAGTGTGTGTGCCCATTTCCTCAAGGGTGGATCATTATGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS GCA 90 bp | TGGTACTCTTATTCTGTCATTCATGGCACCCAATGCAGTGCTCTGTaGATAGATGGTTTACCACATGTAGTAAGAGTAAATGAAAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: WYSYSVIHGTQCSAL*IDGLPHVVRVNENK Trigger: TTTATTTTCATTTACTCTTACTACATGTGGTAAACCATCTATGCACAGAGCACTGCATTGGGTGCCATGAATGACAGAATAAGAGTACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS GCA 72 bp | GCTGGGGCACGTTCCCTGGGATGGCGCAGCCACACCTaGGGGGCTGGAGCCTACCTTTGCTGCTGGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGARSLGWRSHT*GAGAYLCCWTL Trigger: CAGCGTCCAGCAGCAAAGGTAGGCTCCAGCCCCGCAGGTGTGGCTGCGCCATCCCAGGGAACGTGCCCCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS CCA 72 bp | GCAGCACCAGCACTTGCTGGGGCACGTTCCCTGGGATaGCGCAGCCACACCTGCGGGGCTGGAGCCTACCTT | + |
|
Preference number: 6 (lower is better) Translates to: AAPALAGARSLG*RSHTCGAGAYL Trigger: AAGGTAGGCTCCAGCCCCGCAGGTGTGGCTGCGCCATCCCAGGGAACGTGCCCCAGCAAGTGCTGGTGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS TCA 72 bp | CCCGCGTGGACCCAGCAGCCAGACCGCACACCCACGTaGTGTGCCCTGGAAAGTGCCTTTGCTGCTGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: PAWTQQPDRTPT*CALESAFAAGR Trigger: GCGTCCAGCAGCAAAGGCACTTTCCAGGGCACATCACGTGGGTGTGCGGTCTGGCTGCTGGGTCCACGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647993.1 |
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| CDS GCA 72 bp | CCTGCGGGGCTGGAGCCTACCTTTGCTGCTGGACGCTaGTCAGCACCCAGCCCTCCTGCTTTCCTTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PAGLEPTFAAGR*SAPSPPAFLGR Trigger: CCTCCCAAGGAAAGCAGGAGGGCTGGGTGCTGAGCAGCGTCCAGCAGCAAAGGTAGGCTCCAGCCCCGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 72 bp | GCCCACTGGGACCACAGTACCCGGAGCCCTGGGCCCTaGACGGGGTCCTTTCCTGGGCCTTGTTTTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AHWDHSTRSPGP*TGSFPGPCFLA Trigger: TGCCAGAAAACAAGGCCCAGGAAAGGACCCCGTGCAGGGCCCAGGGCTCCGGGTACTGTGGTCCCAGTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CCA 72 bp | ACGTTCCCTGGGATGGCGCAGCCACACCTGCGGGGCTaGAGCCTACCTTTGCTGCTGGACGCTGCTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TFPGMAQPHLRG*SLPLLLDAAQH Trigger: GTGCTGAGCAGCGTCCAGCAGCAAAGGTAGGCTCCAGCCCCGCAGGTGTGGCTGCGCCATCCCAGGGAACGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS CAA 90 bp | TTCCCTGGGATGGCGCAGCCACACCTGCGGGGCTGGAGCCTACCTTaGCTGCTGGACGCTGCTCAGCACCCAGCCCTCCTGCTTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FPGMAQPHLRGWSLP*LLDAAQHPALLLSL Trigger: CAAGGAAAGCAGGAGGGCTGGGTGCTGAGCAGCGTCCAGCAGCAAAGGTAGGCTCCAGCCCCGCAGGTGTGGCTGCGCCATCCCAGGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 72 bp | ACCAACCCCACCTGTAGTGAGAGCAGCACCAGCACTTaGTGGGGCACGTTCCCTGGGATGGCGCAGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: TNPTCSESSTST*WGTFPGMAQPH Trigger: GTGTGGCTGCGCCATCCCAGGGAACGTGCCCCAGCAAGTGCTGGTGCTGCTCTCACTACAGGTGGGGTTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 72 bp | GCCAGACCGCACACCCACGTGATGTGCCCTGGAAAGTaGCTGCCGTGGGTCCAGAGGGCAAGAGGTGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ARPHTHVMCPGK*LPWVQRARGEE Trigger: TTCCTCACCTCTTGCCCTCTGGACCCACGGCAGGCACTTTCCAGGGCACATCACGTGGGTGTGCGGTCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 72 bp | GTGGACCCAGCAGCCAGACCGCACACCCACGTGATGTaGCCTGGAAAGTGCCTTTGCTGCTGGACGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VDPAARPHTHVM*PGKCLCCWTLL Trigger: GAGCAGCGTCCAGCAGCAAAGGCACTTTCCAGGGCACATCACGTGGGTGTGCGGTCTGGCTGCTGGGTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647993.1 |
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| CDS CCA 72 bp | TTAACAGGCCCACTGGGACCACAGTACCCGGAGCCCTaGGCCCTGCACGGGGTCCTTTCCTGGGCCTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTGPLGPQYPEP*ALHGVLSWALF Trigger: AAACAAGGCCCAGGAAAGGACCCCGTGCAGGGCCCAGGGCTCCGGGTACTGTGGTCCCAGTGGGCCTGTTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS GCA 72 bp | GCCCAGCTCGTCACCTCGGAAAGTGCCTTAGCTCTCTaGTGTCAGCCCACATTGCTGCAGCTCCCAGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AQLVTSESALAL*CQPTLLQLPGP Trigger: AGGGCCTGGGAGCTGCAGCAATGTGGGCTGACAGCAGAGAGCTAAGGCACTTTCCGAGGTGACGAGCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | CACACCCACGTGATGTGCCCTGGAAAGTGCCTGCCGTaGGTCCAGAGGGCAAGAGGTGAGGAAGTGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: HTHVMCPGKCLP*VQRARGEEVPP Trigger: AGGTGGCACTTCCTCACCTCTTGCCCTCTGGACCCACGGCAGGCACTTTCCAGGGCACATCACGTGGGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS GCA 72 bp | GCCTGCCGTGGGTCCAGAGGGCAAGAGGTGAGGAAGTaGCACCTGTCCAGTGAAACCAACCCCACCTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ACRGSRGQEVRK*HLSSETNPTCS Trigger: ACTACAGGTGGGGTTGGTTTCACTGGACAGGTGGCACTTCCTCACCTCTTGCCCTCTGGACCCACGGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS CAA 90 bp | CAGCCCTCCTGCTTTCCTTGGGAGGCTTCCAGGCCCTTGGATGACTaGATGGGACCATTTCTTGCCACAGGAGCCAGAGGGTCCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: QPSCFPWEASRPLDD*MGPFLATGARGSRR Trigger: CCGTCTGGACCCTCTGGCTCCTGTGGCAAGAAATGGTCCCATCAAGTCATCCAAGGGCCTGGAAGCCTCCCAAGGAAAGCAGGAGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 90 bp | CTCAGCACCCAGCCCTCCTGCTTTCCTTGGGAGGCTTCCAGGCCCTaGGATGACTTGATGGGACCATTTCTTGCCACAGGAGCCAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSTQPSCFPWEASRP*DDLMGPFLATGARG Trigger: CCCTCTGGCTCCTGTGGCAAGAAATGGTCCCATCAAGTCATCCAAGGGCCTGGAAGCCTCCCAAGGAAAGCAGGAGGGCTGGGTGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 90 bp | CAGTACCCGGAGCCCTGGGCCCTGCACGGGGTCCTTTCCTGGGCCTaGTTTTCTGGCATCTCCAAATCTGAGAACGGGCATCTTACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QYPEPWALHGVLSWA*FSGISKSENGHLTS Trigger: GGACGTAAGATGCCCGTTCTCAGATTTGGAGATGCCAGAAAACAAGGCCCAGGAAAGGACCCCGTGCAGGGCCCAGGGCTCCGGGTACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS TCA 72 bp | TGGAAAGTGCCTGCCGTGGGTCCAGAGGGCAAGAGGTaGGGAAGTGCCACCTGTCCAGTGAAACCAACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WKVPAVGPEGKR*GSATCPVKPTP Trigger: TGGGGTTGGTTTCACTGGACAGGTGGCACTTCCTCACCTCTTGCCCTCTGGACCCACGGCAGGCACTTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425630.2 |
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| CDS TCA 72 bp | ACCCTCCGGGAACCGTCCCTACCTGAAATATGGGTGTaGTGTACGGAGCACACGCAGCCACCCTGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: TLREPSLPEIWV*CTEHTQPPCSM Trigger: CATGCTGCAGGGTGGCTGCGTGTGCTCCGTACATCACACCCATATTTCAGGTAGGGACGGTTCCCGGAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583117.1 |
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| CDS TCA 72 bp | CATGGTGCTGAGCACCCTCCGGGAACCGTCCCTACCTaGAATATGGGTGTGATGTACGGAGCACACGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HGAEHPPGTVPT*NMGVMYGAHAA Trigger: GGCTGCGTGTGCTCCGTACATCACACCCATATTTCAGGTAGGGACGGTTCCCGGAGGGTGCTCAGCACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583117.1 |
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| CDS TCA 72 bp | CCAACTGTGGAAAGAGCTTGCAAGCCAGGTCATGATTaGGAACCCGCGTGGACCCAGCAGCCAGACCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PTVERACKPGHD*EPAWTQQPDRT Trigger: TGTGCGGTCTGGCTGCTGGGTCCACGCGGGTTCTCAATCATGACCTGGCTTGCAAGCTCTTTCCACAGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 72 bp | AACGGGCATCTTACGTCCCGAGGAGGGCCACACTGCTaGATTTCCTCCCAGCCTTTGGTCTGTCCTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NGHLTSRGGPHC*ISSQPLVCPLV Trigger: GACCAGAGGACAGACCAAAGGCTGGGAGGAAATTCAGCAGTGTGGCCCTCCTCGGGACGTAAGATGCCCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS GCA 72 bp | CTCCAGCATAGCAGCCCAGCTCGTCACCTCGGAAAGTaGCTTAGCTCTCTGCTGTCAGCCCACATTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQHSSPARHLGK*LSSLLSAHIAA Trigger: TGCAGCAATGTGGGCTGACAGCAGAGAGCTAAGGCACTTTCCGAGGTGACGAGCTGGGCTGCTATGCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 90 bp | AAGGCCGATAGCGACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTaGAGGTGCCGGAGCCTTTCCGTGGAGGGATCTGTCAGAGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KADSDRRVSNAARVR*RCRSLSVEGSVRGD Trigger: ATCCCCTCTGACAGATCCCTCCACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCGCTATCGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652683.1 |
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| CDS CAA 90 bp | GACGGTCCTGCAGCATCACAGCCACTCACATACGTTCCGGAAGTTTaGTTCAAAGCCCGTGCTCTGACGGCCTCTAACACGGAGGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DGPAASQPLTYVPEV*FKARALTASNTEAS Trigger: AGACGCCTCCGTGTTAGAGGCCGTCAGAGCACGGGCTTTGAACAAAACTTCCGGAACGTATGTGAGTGGCTGTGATGCTGCAGGACCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS TCA 72 bp | GCTTTCCTTGGGAGGCTTCCAGGCCCTTGGATGACTTaGTGGGACCATTTCTTGCCACAGGAGCCAGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AFLGRLPGPWMT*WDHFLPQEPEG Trigger: ACCCTCTGGCTCCTGTGGCAAGAAATGGTCCCATCAAGTCATCCAAGGGCCTGGAAGCCTCCCAAGGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 72 bp | CTCCTGCTTTCCTTGGGAGGCTTCCAGGCCCTTGGATaGCTTGATGGGACCATTTCTTGCCACAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLSLGGFQALG*LDGTISCHRSQ Trigger: CTGGCTCCTGTGGCAAGAAATGGTCCCATCAAGTCATCCAAGGGCCTGGAAGCCTCCCAAGGAAAGCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 72 bp | CTGACATGGTGGGTACATGTGGAGCACACCCACTTCTaGCAGCCGACTGGGGCCACAAGTGGGACCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LTWWVHVEHTHF*QPTGATSGTKK Trigger: TTTCTTGGTCCCACTTGTGGCCCCAGTCGGCTGTCAGAAGTGGGTGTGCTCCACATGTACCCACCATGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 72 bp | AAAGGGCTTAAGACCCACAGAAGTACCCCGTGGTCTTaGTGCAGGTGGCTGCCTGCCTGCTCCAGGAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KGLKTHRSTPWS*CRWLPACSRSL Trigger: CAAACTCCTGGAGCAGGCAGGCAGCCACCTGCATCAAGACCACGGGGTACTTCTGTGGGTCTTAAGCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 72 bp | GGTACATGTGGAGCACACCCACTTCTGACAGCCGACTaGGGCCACAAGTGGGACCAAGAAAATGTGCGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GTCGAHPLLTAD*GHKWDQENVRL Trigger: TAGGCGCACATTTTCTTGGTCCCACTTGTGGCCCCAGTCGGCTGTCAGAAGTGGGTGTGCTCCACATGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | GGGGTGTGGAGACCAGGGTTTGACCATGCAGATCTCTaGGTAGCAGGCTTTGGAGGGAACAGATGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: GVWRPGFDHADL*VAGFGGNRWSL Trigger: CAGTGACCATCTGTTCCCTCCAAAGCCTGCTACCCAGAGATCTGCATGGTCAAACCCTGGTCTCCACACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CAA 72 bp | TGCTTTCCTTGGGAGGCTTCCAGGCCCTTGGATGACTaGATGGGACCATTTCTTGCCACAGGAGCCAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CFPWEASRPLDD*MGPFLATGARG Trigger: CCCTCTGGCTCCTGTGGCAAGAAATGGTCCCATCAAGTCATCCAAGGGCCTGGAAGCCTCCCAAGGAAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 72 bp | CAGCCCTCCTGCTTTCCTTGGGAGGCTTCCAGGCCCTaGGATGACTTGATGGGACCATTTCTTGCCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QPSCFPWEASRP*DDLMGPFLATG Trigger: TCCTGTGGCAAGAAATGGTCCCATCAAGTCATCCAAGGGCCTGGAAGCCTCCCAAGGAAAGCAGGAGGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 72 bp | AGCGACAGAAGAGTTTCCAATGCAGCCAGAGTGAGGTaGAGGTGCCGGAGCCTTTCCGTGGAGGGATCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SDRRVSNAARVR*RCRSLSVEGSV Trigger: GACAGATCCCTCCACGGAAAGGCTCCGGCACCTCAACCTCACTCTGGCTGCATTGGAAACTCTTCTGTCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652683.1 |
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| CDS TCA 72 bp | TGTACGGAGCACACGCAGCCACCCTGCAGCATGAGATaGCTGTTGAGTACAGGACACGCAGAACGAAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CTEHTQPPCSMR*LLSTGHAERSL Trigger: CAAGCTTCGTTCTGCGTGTCCTGTACTCAACAGTCATCTCATGCTGCAGGGTGGCTGCGTGTGCTCCGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000425630.2 ENST00000583117.1 ENST00000647993.1 ENST00000652683.1 ENST00000655745.1 ENST00000666348.1 |
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| CDS TCA 72 bp | CCTTTCCTGGGCCTTGTTTTCTGGCATCTCCAAATCTaGGAACGGGCATCTTACGTCCCGAGGAGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PFLGLVFWHLQI*ERASYVPRRAT Trigger: TGTGGCCCTCCTCGGGACGTAAGATGCCCGTTCTCAGATTTGGAGATGCCAGAAAACAAGGCCCAGGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CCA 72 bp | GCACACCCACTTCTGACAGCCGACTGGGGCCACAAGTaGGACCAAGAAAATGTGCGCCTATCTCAACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AHPLLTADWGHK*DQENVRLSQLW Trigger: CCAAAGTTGAGATAGGCGCACATTTTCTTGGTCCCACTTGTGGCCCCAGTCGGCTGTCAGAAGTGGGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | CTTGATGCAGGTGGCTGCCTGCCTGCTCCAGGAGTTTaGGGGTCATTCTCCTACCCCAATTCATCTAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LDAGGCLPAPGV*GSFSYPNSSKR Trigger: CCTCTTAGATGAATTGGGGTAGGAGAATGACCCCCAAACTCCTGGAGCAGGCAGGCAGCCACCTGCATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 72 bp | CTCGGCATCCTCTGTCAGAAACCCCTATTCAGGGAGTaGGGAAAGGGCTTAAGACCCACAGAAGTACCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LGILCQKPLFRE*GKGLRPTEVPR Trigger: ACGGGGTACTTCTGTGGGTCTTAAGCCCTTTCCCCACTCCCTGAATAGGGGTTTCTGACAGAGGATGCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 72 bp | GAGGAGGGCCACACTGCTGAATTTCCTCCCAGCCTTTaGTCTGTCCTCTGGTCTCAGAGTCAAGGGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EEGHTAEFPPSL*SVLWSQSQGKK Trigger: CTTCTTCCCTTGACTCTGAGACCAGAGGACAGACCAAAGGCTGGGAGGAAATTCAGCAGTGTGGCCCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS TCA 72 bp | GATTTTGGGGCCTCTGGTCAACATCAAGGCACCTGCTaGGGTGTGAAATGTGAGCACTGTGCCCTGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: DFGASGQHQGTC*GVKCEHCALTW Trigger: CCATGTCAGGGCACAGTGCTCACATTTCACACCTCAGCAGGTGCCTTGATGTTGACCAGAGGCCCCAAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 72 bp | TCCTCAGCCTTGGCTTGTTCATCTGAAATATGGGTGTaGTGTACGGAGCACACGCAGCCACCCTGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SSALACSSEIWV*CTEHTQPPCSM Trigger: CATGCTGCAGGGTGGCTGCGTGTGCTCCGTACATCACACCCATATTTCAGATGAACAAGCCAAGGCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS TCA 72 bp | CATACGTTCCGGAAGTTTTGTTCAAAGCCCGTGCTCTaGCGGCCTCTAACACGGAGGCGTCTCTTCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HTFRKFCSKPVL*RPLTRRRLFQE Trigger: TTCCTGGAAGAGACGCCTCCGTGTTAGAGGCCGTCAGAGCACGGGCTTTGAACAAAACTTCCGGAACGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS GCA 72 bp | ACACCAGCGTTTAGACAACCGCGTCACATGTCAGAGTaGCTCGGCATCCTCTGTCAGAAACCCCTATTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPAFRQPRHMSE*LGILCQKPLFR Trigger: CCTGAATAGGGGTTTCTGACAGAGGATGCCGAGGCACTCTGACATGTGACGCGGTTGTCTAAACGCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CAA 72 bp | GCAGCATCACAGCCACTCACATACGTTCCGGAAGTTTaGTTCAAAGCCCGTGCTCTGACGGCCTCTAACACG | + |
|
Preference number: 6 (lower is better) Translates to: AASQPLTYVPEV*FKARALTASNT Trigger: CGTGTTAGAGGCCGTCAGAGCACGGGCTTTGAACAAAACTTCCGGAACGTATGTGAGTGGCTGTGATGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS TCA 72 bp | TGGTCAACATCAAGGCACCTGCTGAGGTGTGAAATGTaGGCACTGTGCCCTGACATGGTGGGTACATGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WSTSRHLLRCEM*ALCPDMVGTCG Trigger: TCCACATGTACCCACCATGTCAGGGCACAGTGCTCACATTTCACACCTCAGCAGGTGCCTTGATGTTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS GCA 72 bp | CATTCTCCTACCCCAATTCATCTAAGAGGCAGCATTTaGCATGGCAGGCCTCCTACCTGCAGGCTCATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSPTPIHLRGSI*HGRPPTCRLIS Trigger: TGAGATGAGCCTGCAGGTAGGAGGCCTGCCATGGCAAATGCTGCCTCTTAGATGAATTGGGGTAGGAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 72 bp | ACAGCCTCAGGAGGTCCTGACGCCATGTGCCCAGTGTaGTCGGAGCACAGCTTGGTTTTATACATTTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: TASGGPDAMCPV*SEHSLVLYILE Trigger: CTCTAAAATGTATAAAACCAAGCTGTGCTCCGACCACACTGGGCACATGGCGTCAGGACCTCCTGAGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CAA 90 bp | CTGGGGCCACAAGTGGGACCAAGAAAATGTGCGCCTATCTCAACTTaGGTCCTGTGTGTGGAACACACACACACACACACAGAACTTGTG | + |
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Preference number: 6 (lower is better) Translates to: LGPQVGPRKCAPIST*VLCVEHTHTHTELV Trigger: CACAAGTTCTGTGTGTGTGTGTGTGTGTTCCACACACAGGACCAAAGTTGAGATAGGCGCACATTTTCTTGGTCCCACTTGTGGCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | TGTGACTTCCAGACCCACAACTTACTGCCTGTGTGCTaGGCAAGGAGTTTTCTTTTCCTCAGCCTTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: CDFQTHNLLPVC*ARSFLFLSLGL Trigger: CAAGCCAAGGCTGAGGAAAAGAAAACTCCTTGCCCAGCACACAGGCAGTAAGTTGTGGGTCTGGAAGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 72 bp | CTGAACCAGTTTTTCAGGTTAACTCTGGAATGCCCTTaGCTGAGAAGAGGGGTCCATTTGGATGGTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LNQFFRLTLECP*LRRGVHLDGWG Trigger: CCCCCAACCATCCAAATGGACCCCTCTTCTCAGCCAAGGGCATTCCAGAGTTAACCTGAAAAACTGGTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 72 bp | GCAGATCTCTGGGTAGCAGGCTTTGGAGGGAACAGATaGTCACTGTTTCTCATCGGACTCAGGTCTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ADLWVAGFGGNR*SLFLIGLRSLL Trigger: CAACAAAGACCTGAGTCCGATGAGAAACAGTGACCATCTGTTCCCTCCAAAGCCTGCTACCCAGAGATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 72 bp | ACTGCTGAATTTCCTCCCAGCCTTTGGTCTGTCCTCTaGTCTCAGAGTCAAGGGAAGAAGCCAAATCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: TAEFPPSLWSVL*SQSQGKKPNPS Trigger: TGAGGGATTTGGCTTCTTCCCTTGACTCTGAGACCAGAGGACAGACCAAAGGCTGGGAGGAAATTCAGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CAA 72 bp | GAACGAAGCTTGGAAAGCTGCAGAGCTGACTTCAGGTaGTGCCAATTCCTGTGCTGCCTCATCCCTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: ERSLESCRADFR*CQFLCCLIPHV Trigger: TACATGAGGGATGAGGCAGCACAGGAATTGGCACAACCTGAAGTCAGCTCTGCAGCTTTCCAAGCTTCGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000425630.2 ENST00000583117.1 ENST00000647993.1 ENST00000652683.1 ENST00000655745.1 ENST00000666348.1 |
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| CDS GCA 72 bp | CATGGAACTAGTGTGACTTCCAGACCCACAACTTACTaGCTGTGTGCTGGGCAAGGAGTTTTCTTTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: HGTSVTSRPTTY*LCAGQGVFFSS Trigger: TGAGGAAAAGAAAACTCCTTGCCCAGCACACAGGCAGTAAGTTGTGGGTCTGGAAGTCACACTAGTTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS GCA 72 bp | AACCAGATAGAGAAGTTATTTGTCTTCCGACGGTCCTaGAGCATCACAGCCACTCACATACGTTCCGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: NQIEKLFVFRRS*SITATHIRSGS Trigger: ACTTCCGGAACGTATGTGAGTGGCTGTGATGCTGCAGGACCGTCGGAAGACAAATAACTTCTCTATCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CCA 72 bp | GCGGATACTTCCCCAACGGCTTCATTTATCCAACTGTaGAAAGAGCTTGCAAGCCAGGTCATGATTGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: ADTSPTASFIQL*KELASQVMIEN Trigger: GTTCTCAATCATGACCTGGCTTGCAAGCTCTTTCCACAGTTGGATAAATGAAGCCGTTGGGGAAGTATCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | TATAAAGAACGCATCGTCTTCACAAGATGGTCATCTTaGAGAGGCAGAGCTGAGAAAGACTCCACTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: YKERIVFTRWSS*RGRAEKDSTPR Trigger: CCGAGGAGTGGAGTCTTTCTCAGCTCTGCCTCTCCAAGATGACCATCTTGTGAAGACGATGCGTTCTTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | AAGTGGGACCAAGAAAATGTGCGCCTATCTCAACTTTaGTCCTGTGTGTGGAACACACACACACACACACAG | + |
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Preference number: 6 (lower is better) Translates to: KWDQENVRLSQL*SCVWNTHTHTQ Trigger: CTGTGTGTGTGTGTGTGTGTTCCACACACAGGACCAAAGTTGAGATAGGCGCACATTTTCTTGGTCCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 72 bp | CTTAAGCAACTTGCCCGATACATCAAAGCTACACGGTaGGAGCTCTTAATCTCCACCCAGATGGCTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LKQLARYIKATR*ELLISTQMAFS Trigger: GCTGAAAGCCATCTGGGTGGAGATTAAGAGCTCCAACCGTGTAGCTTTGATGTATCGGGCAAGTTGCTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 72 bp | CCTGACGCCATGTGCCCAGTGTGGTCGGAGCACAGCTaGGTTTTATACATTTTAGAGAGAATTGAGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: PDAMCPVWSEHS*VLYILERIEAS Trigger: TGATGCCTCAATTCTCTCTAAAATGTATAAAACCAAGCTGTGCTCCGACCACACTGGGCACATGGCGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CAA 90 bp | TCAGGAGGTCCTGACGCCATGTGCCCAGTGTGGTCGGAGCACAGCTaGGTTTTATACATTTTAGAGAGAATTGAGGCATCATTCAATACG | + |
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Preference number: 6 (lower is better) Translates to: SGGPDAMCPVWSEHS*VLYILERIEASFNT Trigger: CGTATTGAATGATGCCTCAATTCTCTCTAAAATGTATAAAACCAAGCTGTGCTCCGACCACACTGGGCACATGGCGTCAGGACCTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CAA 90 bp | AGAAGGGCCACGCGTGTGTCATTATCACATACTCACTGTAAGAGTTaGCGGATACTTCCCCAACGGCTTCATTTATCCAACTGTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RRATRVSLSHTHCKS*RILPQRLHLSNCGK Trigger: CTTTCCACAGTTGGATAAATGAAGCCGTTGGGGAAGTATCCGCAAACTCTTACAGTGAGTATGTGATAATGACACACGCGTGGCCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 90 bp | ATTAAAGAGCTTAAGCAACTTGCCCGATACATCAAAGCTACACGGTaGGAGCTCTTAATCTCCACCCAGATGGCTTTCAGCTGCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: IKELKQLARYIKATR*ELLISTQMAFSCSP Trigger: TGGAGAGCAGCTGAAAGCCATCTGGGTGGAGATTAAGAGCTCCAACCGTGTAGCTTTGATGTATCGGGCAAGTTGCTTAAGCTCTTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS GCA 72 bp | TCATGTCTGAACCAGTTTTTCAGGTTAACTCTGGAATaGCCTTGGCTGAGAAGAGGGGTCCATTTGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: SCLNQFFRLTLE*PWLRRGVHLDG Trigger: ACCATCCAAATGGACCCCTCTTCTCAGCCAAGGGCATTCCAGAGTTAACCTGAAAAACTGGTTCAGACATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS TCA 72 bp | GATCCACCCTTGAGGAAATGGGCACACACACTACCCTaGTTGGATCATTACACAACACAGATATGCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: DPPLRKWAHTLP*LDHYTTQICME Trigger: TTCCATGCATATCTGTGTTGTGTAATGATCCAATCAGGGTAGTGTGTGTGCCCATTTCCTCAAGGGTGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | GTATGGATTCGTGTATTAAGTCCACAGGAGACTCCATaGAAGGAGAGATTAAAGCTCTTCAGAGAAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: VWIRVLSPQETP*KERLKLFREGR Trigger: TCGGCCTTCTCTGAAGAGCTTTAATCTCTCCTTCCATGGAGTCTCCTGTGGACTTAATACACGAATCCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652683.1 |
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| CDS CAA 90 bp | CAACTTTGGTCCTGTGTGTGGAACACACACACACACACACAGAACTaGTGTATAAAGAACGCATCGTCTTCACAAGATGGTCATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QLWSCVWNTHTHTQN*CIKNASSSQDGHLG Trigger: TCCAAGATGACCATCTTGTGAAGACGATGCGTTCTTTATACACAAGTTCTGTGTGTGTGTGTGTGTGTTCCACACACAGGACCAAAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | GAAAATGTGCGCCTATCTCAACTTTGGTCCTGTGTGTaGAACACACACACACACACACAGAACTTGTGTATA | + |
|
Preference number: 6 (lower is better) Translates to: ENVRLSQLWSCV*NTHTHTQNLCI Trigger: TATACACAAGTTCTGTGTGTGTGTGTGTGTGTTCCACACACAGGACCAAAGTTGAGATAGGCGCACATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | AACACGAAGCTCTTCTGTTTATCTGGTGAGAATCTATaGTTCTCCCACAAGGGCTCTGACAAAGTTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: NTKLFCLSGENL*FSHKGSDKVSW Trigger: CCAAGAAACTTTGTCAGAGCCCTTGTGGGAGAACCATAGATTCTCACCAGATAAACAGAAGAGCTTCGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | CTTTTCATGCACCTGGTACTCTTATTCTGTCATTCATaGCACCCAATGCAGTGCTCTGTGCATAGATGGTTT | + |
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Preference number: 6 (lower is better) Translates to: LFMHLVLLFCHS*HPMQCSVHRWF Trigger: AAACCATCTATGCACAGAGCACTGCATTGGGTGCCATGAATGACAGAATAAGAGTACCAGGTGCATGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 72 bp | ACGCGTGTGTCATTATCACATACTCACTGTAAGAGTTaGCGGATACTTCCCCAACGGCTTCATTTATCCAAC | + |
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Preference number: 6 (lower is better) Translates to: TRVSLSHTHCKS*RILPQRLHLSN Trigger: GTTGGATAAATGAAGCCGTTGGGGAAGTATCCGCAAACTCTTACAGTGAGTATGTGATAATGACACACGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CAA 72 bp | TCCTGTGTGTGGAACACACACACACACACACAGAACTaGTGTATAAAGAACGCATCGTCTTCACAAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: SCVWNTHTHTQN*CIKNASSSQDG Trigger: ACCATCTTGTGAAGACGATGCGTTCTTTATACACAAGTTCTGTGTGTGTGTGTGTGTGTTCCACACACAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 72 bp | TTTCCCAGGATTTGTTGCCATTCTCTGACTTATCGGTaGACATCAAGGAAAAGATTGACTCTGAAGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: FPRICCHSLTYR*TSRKRLTLKSH Trigger: GTGGCTCTTCAGAGTCAATCTTTTCCTTGATGTTCACCGATAAGTCAGAGAATGGCAACAAATCCTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS GCA 72 bp | GTACTCTTATTCTGTCATTCATGGCACCCAATGCAGTaGTCTGTGCATAGATGGTTTACCACATGTAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: VLLFCHSWHPMQ*SVHRWFTTCSK Trigger: CTTACTACATGTGGTAAACCATCTATGCACAGAGCACTGCATTGGGTGCCATGAATGACAGAATAAGAGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | CTCGTGGCTTATTTCACGAAGGTGCTTTGTTACAGATaGCGGAAATGTACCTTTCCCTGCTTTATAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: LVAYFTKVLCYR*RKCTFPCFIRH Trigger: ATGTCTTATAAAGCAGGGAAAGGTACATTTCCGCCATCTGTAACAAAGCACCTTCGTGAAATAAGCCACGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CAA 72 bp | GAATTGAGGCATCATTCAATACGTGTAGGATTGACATaGGTTCAGTCTGGAAAGACGGGACAACTCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: ELRHHSIRVGLT*VQSGKTGQLKA Trigger: TGCTTTGAGTTGTCCCGTCTTTCCAGACTGAACCAATGTCAATCCTACACGTATTGAATGATGCCTCAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655745.1 |
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| CDS CCA 72 bp | CTCTGTCTCATTTGTCTTTTAAGCTTTTCATGCACCTaGTACTCTTATTCTGTCATTCATGGCACCCAATGC | + |
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Preference number: 6 (lower is better) Translates to: LCLICLLSFSCT*YSYSVIHGTQC Trigger: GCATTGGGTGCCATGAATGACAGAATAAGAGTACCAGGTGCATGAAAAGCTTAAAAGACAAATGAGACAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | CACATTAATTCCATGCTACCCATTAGTACAAGTGTATaGATTCGTGTATTAAGTCCACAGGAGACTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: HINSMLPISTSV*IRVLSPQETPW Trigger: CCATGGAGTCTCCTGTGGACTTAATACACGAATCCATACACTTGTACTAATGGGTAGCATGGAATTAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652683.1 |
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| CDS CAA 72 bp | ATAAATGAGGAAACAGCATTAAAGAGCTTAAGCAACTaGCCCGATACATCAAAGCTACACGGTTGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: INEETALKSLSN*PDTSKLHGWSS Trigger: AGAGCTCCAACCGTGTAGCTTTGATGTATCGGGCAAGTTGCTTAAGCTCTTTAATGCTGTTTCCTCATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS CCA 72 bp | TCTCTTCCAGGAATCCCAATTTTACTTTTTAACTCGTaGCTTATTTCACGAAGGTGCTTTGTTACAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLPGIPILLFNS*LISRRCFVTDG Trigger: GCCATCTGTAACAAAGCACCTTCGTGAAATAAGCCACGAGTTAAAAAGTAAAATTGGGATTCCTGGAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666348.1 |
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| CDS CAA 90 bp | TCATGCTTTCTTGCTACTTACCTTACACTAAAAAGTATCAGGTACTaGACTGTGTACTCGGCACTTGCCACTCACTTTTCATTACTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SCFLATYLTLKSIRY*TVYSALATHFSLLF Trigger: AAACAGTAATGAAAAGTGAGTGGCAAGTGCCGAGTACACAGTCAAGTACCTGATACTTTTTAGTGTAAGGTAAGTAGCAAGAAAGCATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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| CDS TCA 72 bp | TTTAAGGAATGGGTATTTTTGGCCTCACACAATAAATaGGGAAACAGCATTAAAGAGCTTAAGCAACTTGCC | + |
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Preference number: 6 (lower is better) Translates to: FKEWVFLASHNK*GNSIKELKQLA Trigger: GGCAAGTTGCTTAAGCTCTTTAATGCTGTTTCCTCATTTATTGTGTGAGGCCAAAAATACCCATTCCTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000425630.2 ENST00000647993.1 |
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