Pregenerated sensors for LINC00189 (Homo sapiens)

Ensembl gene IDs: ENSG00000215533

Ensembl transcript IDs: ENST00000420364.1, ENST00000431661.1, ENST00000447125.5

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	GGGCGGATTGCTTCACCTCAAGAGTTCAAGACCAGCTaGGAACATGGTGAAACCCCAACTCTACTGCAAAGC	+
Preference number: 6 (lower is better) Translates to: GRIASPQEFKTS*EHGETPTLLQS Trigger: GCTTTGCAGTAGAGTTGGGGTTTCACCATGTTCCCAGCTGGTCTTGAACTCTTGAGGTGAAGCAATCCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447125.5
CDS CAA 90 bp	TCAGGCCAAAAGCTGGCAAAGGTTGCCATGCAGTCTTCAGGCTCATaGACCAAGAGCCCCTTCCTCCACCTGAAACATTCCCTGAAGATC	+
Preference number: 6 (lower is better) Translates to: SGQKLAKVAMQSSGS*TKSPFLHLKHSLKI Trigger: GATCTTCAGGGAATGTTTCAGGTGGAGGAAGGGGCTCTTGGTCAATGAGCCTGAAGACTGCATGGCAACCTTTGCCAGCTTTTGGCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420364.1 ENST00000447125.5
CDS TCA 72 bp	GGCGTCTGCAGCAACTTCAATTCTTGCCTCCTCAGATaGAAGAATTCGACTGAGGGGCATAAAGCAGAAAAA	+
Preference number: 6 (lower is better) Translates to: GVCSNFNSCLLR*KNSTEGHKAEK Trigger: TTTTTCTGCTTTATGCCCCTCAGTCGAATTCTTTCATCTGAGGAGGCAAGAATTGAAGTTGCTGCAGACGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420364.1 ENST00000447125.5
CDS CAA 72 bp	ATTGGGAACAGATATTTCATGCCATTTCATAGCCAGTaGTCCAACCTGGTGAGATTACTTAGAATTTTCATC	+
Preference number: 6 (lower is better) Translates to: IGNRYFMPFHSQ*SNLVRLLRIFI Trigger: GATGAAAATTCTAAGTAATCTCACCAGGTTGGACAACTGGCTATGAAATGGCATGAAATATCTGTTCCCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431661.1

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