Pregenerated sensors for LINC00174 (Homo sapiens)
Ensembl gene IDs: ENSG00000179406Ensembl transcript IDs: ENST00000412091.1, ENST00000416572.1, ENST00000421767.1, ENST00000442578.5, ENST00000450353.3, ENST00000638517.1, ENST00000638592.1, ENST00000639086.1, ENST00000640964.1, ENST00000654214.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGGCAAGAGCCCGGCCCCCATGGGCCACTGTGCGGGAGAAGCTATaGTTGTTCGGGCATCCAACACACGTGCTGTTCCTGGCGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: EARARPPWATVREKL*LFGHPTHVLFLARL Trigger: AAGCCTCGCCAGGAACAGCACGTGTGTTGGATGCCCGAACAACCATAGCTTCTCCCGCACAGTGGCCCATGGGGGCCGGGCTCTTGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS TCA 90 bp | TCCAGGGCCAGGAAACGGATTCTCCCGCAGAGCCTGGAAAGGCACTaGCCCTGCTCCCACCTTGACTCAGTGGGACTGACTTTAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: SRARKRILPQSLERH*PCSHLDSVGLTLEF Trigger: GAATTCTAAAGTCAGTCCCACTGAGTCAAGGTGGGAGCAGGGTCAGTGCCTTTCCAGGCTCTGCGGGAGAATCCGTTTCCTGGCCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000450353.3 ENST00000638517.1 ENST00000638592.1 ENST00000640964.1 |
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| CDS CCA 90 bp | ACAGATGAAGCTTCCCTCATTCAACACCATTCACCTCCGGCTGTGTaGCTCCTTACAGTTCCATGGCTCTGGCGTTGGGGACCCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: TDEASLIQHHSPPAV*LLTVPWLWRWGPCP Trigger: TGGGCAGGGTCCCCAACGCCAGAGCCATGGAACTGTAAGGAGCCACACAGCCGGAGGTGAATGGTGTTGAATGAGGGAAGCTTCATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS GCA 90 bp | CCTCCGTCTCGCAGGATGGAGTGCTGTGATGGGATCATAGCTCATTaGAGCCTTGAACCTTGGGGTTCAAGTATCTGGGAAGCTGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PPSRRMECCDGIIAH*SLEPWGSSIWEAEV Trigger: CACCTCAGCTTCCCAGATACTTGAACCCCAAGGTTCAAGGCTGCAATGAGCTATGATCCCATCACAGCACTCCATCCTGCGAGACGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412091.1 ENST00000450353.3 ENST00000654214.1 |
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| CDS TCA 90 bp | GCAAGTGTCAGGCCAGATCGTCGCTTGGAGAGTCTGAGAAAGGCATaGGATGGACCTAAACAGACCATTGCGATTCAGCACCTGGGCCTA | + |
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Preference number: 5 (lower is better) Translates to: ASVRPDRRLESLRKA*DGPKQTIAIQHLGL Trigger: TAGGCCCAGGTGCTGAATCGCAATGGTCTGTTTAGGTCCATCTCATGCCTTTCTCAGACTCTCCAAGCGACGATCTGGCCTGACACTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS GCA 90 bp | TCTCCGTCTCGCAGGATGGAGTGCTGTGATGGGATCATAGCTCATTaGAGCCTTGAACCTTGGGGTTCAAGTATCTGGGAAGCTGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SPSRRMECCDGIIAH*SLEPWGSSIWEAEV Trigger: CACCTCAGCTTCCCAGATACTTGAACCCCAAGGTTCAAGGCTGCAATGAGCTATGATCCCATCACAGCACTCCATCCTGCGAGACGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638592.1 |
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| CDS TCA 90 bp | TGGAGAGGCTGGAAGACGTATGAGCTTGTCCTAAACTGTCCAGTGTaGAGGAAGAGTTTGGTCTGTCAAGGCCGTCGGGTAACAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: WRGWKTYELVLNCPV*RKSLVCQGRRVTGC Trigger: ACAGCCTGTTACCCGACGGCCTTGACAGACCAAACTCTTCCTTCACACTGGACAGTTTAGGACAAGCTCATACGTCTTCCAGCCTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS TCA 90 bp | GTAGATCCCTCACATGCATGGTTCACAATGGGGTGCATGCTCCTATaGGAATCTAATGCTGCTGCTGATCTGAGAGAAGGCAGAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: VDPSHAWFTMGCMLL*ESNAAADLREGRAQ Trigger: CTGAGCTCTGCCTTCTCTCAGATCAGCAGCAGCATTAGATTCTCATAGGAGCATGCACCCCATTGTGAACCATGCATGTGAGGGATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS GCA 90 bp | GGTGAAACCCCGTCTCTACAAAAATTAGACAGGTGTGGTGGCGCATaGCTGCAATCTCAGCTACTCAGGAAGCTGAAACATGGGAATCAC | + |
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Preference number: 5 (lower is better) Translates to: GETPSLQKLDRCGGA*LQSQLLRKLKHGNH Trigger: GTGATTCCCATGTTTCAGCTTCCTGAGTAGCTGAGATTGCAGGCATGCGCCACCACACCTGTCTAATTTTTGTAGAGACGGGGTTTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638517.1 |
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| CDS CCA 90 bp | TGGAACCCATGTATAGGAAAAGTCCAAATTATTAGTTGGGCATTGTaGCAAGCACGTACAGTCTCAGCCACCTGGGAGGCTGAGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: WNPCIGKVQIISWAL*QARTVSATWEAEVG Trigger: TCCCACCTCAGCCTCCCAGGTGGCTGAGACTGTACGTGCTTGCCACAATGCCCAACTAATAATTTGGACTTTTCCTATACATGGGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416572.1 ENST00000421767.1 |
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| CDS TCA 90 bp | GTTCATCAGGCATTAGATTCTCCTCTATGTTTGCAGATCAGGCAGTaGAGGGTGAATATGGAACTGATGGGCAGTCATTGGATGGATAGC | + |
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Preference number: 5 (lower is better) Translates to: VHQALDSPLCLQIRQ*RVNMELMGSHWMDS Trigger: GCTATCCATCCAATGACTGCCCATCAGTTCCATATTCACCCTTCACTGCCTGATCTGCAAACATAGAGGAGAATCTAATGCCTGATGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638517.1 |
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| CDS CCA 72 bp | TTTGGGCCACTTTGGGCCACATCGAGGAAGGCAGCTTaGGGCCGGGAGGCGCCGTCAGGCTGGGTGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FGPLWATSRKAA*GREAPSGWVGA Trigger: AGCTCCCACCCAGCCTGACGGCGCCTCCCGGCCCCAAGCTGCCTTCCTCGATGTGGCCCAAAGTGGCCCAAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS CCA 72 bp | GGTCGCGCCATGTTGCCCAGGCAGCTCTTTAACTCCTaGCCTGAACGGATCCTTCCGCCTCGGCCGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GRAMLPRQLFNS*PERILPPRPSL Trigger: CAGGCTCGGCCGAGGCGGAAGGATCCGTTCAGGCCAGGAGTTAAAGAGCTGCCTGGGCAACATGGCGCGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412091.1 ENST00000450353.3 ENST00000654214.1 |
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| CDS CCA 72 bp | GCCCGGCCCCCATGGGCCACTGTGCGGGAGAAGCTATaGTTGTTCGGGCATCCAACACACGTGCTGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ARPPWATVREKL*LFGHPTHVLFL Trigger: CAGGAACAGCACGTGTGTTGGATGCCCGAACAACCATAGCTTCTCCCGCACAGTGGCCCATGGGGGCCGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS CCA 72 bp | CATTCACCTCCGGCTGTGTGGCTCCTTACAGTTCCATaGCTCTGGCGTTGGGGACCCTGCCCAAGTACATCC | + |
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Preference number: 6 (lower is better) Translates to: HSPPAVWLLTVP*LWRWGPCPSTS Trigger: GGATGTACTTGGGCAGGGTCCCCAACGCCAGAGCCATGGAACTGTAAGGAGCCACACAGCCGGAGGTGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS TCA 72 bp | AGGAAACGGATTCTCCCGCAGAGCCTGGAAAGGCACTaGCCCTGCTCCCACCTTGACTCAGTGGGACTGACT | + |
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Preference number: 6 (lower is better) Translates to: RKRILPQSLERH*PCSHLDSVGLT Trigger: AGTCAGTCCCACTGAGTCAAGGTGGGAGCAGGGTCAGTGCCTTTCCAGGCTCTGCGGGAGAATCCGTTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000450353.3 ENST00000638517.1 ENST00000638592.1 ENST00000640964.1 |
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| CDS GCA 72 bp | GGCTGCTCCGCAGGTCCTCCGTCTCGCAGGATGGAGTaGTGTGATGGGATCATAGCTCATTGCAGCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GCSAGPPSRRME*CDGIIAHCSLE Trigger: TTCAAGGCTGCAATGAGCTATGATCCCATCACAGCACTCCATCCTGCGAGACGGAGGACCTGCGGAGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412091.1 ENST00000450353.3 |
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| CDS GCA 72 bp | CCGCTGGAGTCATCTCCTCCTTCTCTTGAGCCACAGTaGCCAGCAATCGTGTGCTTTGTCTGCAGCTATGGC | + |
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Preference number: 6 (lower is better) Translates to: PLESSPPSLEPQ*PAIVCFVCSYG Trigger: GCCATAGCTGCAGACAAAGCACACGATTGCTGGGCACTGTGGCTCAAGAGAAGGAGGAGATGACTCCAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640964.1 |
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| CDS CCA 72 bp | GCTTCCCTCATTCAACACCATTCACCTCCGGCTGTGTaGCTCCTTACAGTTCCATGGCTCTGGCGTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: ASLIQHHSPPAV*LLTVPWLWRWG Trigger: TCCCCAACGCCAGAGCCATGGAACTGTAAGGAGCCACACAGCCGGAGGTGAATGGTGTTGAATGAGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS TCA 72 bp | CTTCTTCCTCCCGCTGGAGTCATCTCCTCCTTCTCTTaGGCCACAGTGCCCAGCAATCGTGTGCTTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLPPAGVISSFS*ATVPSNRVLCL Trigger: CAGACAAAGCACACGATTGCTGGGCACTGTGGCTCAAGAGAAGGAGGAGATGACTCCAGCGGGAGGAAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640964.1 |
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| CDS GCA 72 bp | GGGAGAAGCTATGGTTGTTCGGGCATCCAACACACGTaGTGTTCCTGGCGAGGCTTATTTCAGGACGATTTG | + |
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Preference number: 6 (lower is better) Translates to: GRSYGCSGIQHT*CSWRGLFQDDL Trigger: CAAATCGTCCTGAAATAAGCCTCGCCAGGAACAGCACGTGTGTTGGATGCCCGAACAACCATAGCTTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS CAA 72 bp | CTTCTCTTGAGCCACAGTGCCCAGCAATCGTGTGCTTaGTCTGCAGCTATGGCTGAAATGAGAGTGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LLLSHSAQQSCA*SAAMAEMRVQE Trigger: CTCCTGCACTCTCATTTCAGCCATAGCTGCAGACAAAGCACACGATTGCTGGGCACTGTGGCTCAAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640964.1 |
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| CDS TCA 72 bp | AGTCTGAGGCAGAAGGATAGCTTGAGCCTGAGAGGTTaGGACTGCAGTGAGCCAAGATCAAACCACTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SLRQKDSLSLRG*DCSEPRSNHCA Trigger: AGCACAGTGGTTTGATCTTGGCTCACTGCAGTCTCAACCTCTCAGGCTCAAGCTATCCTTCTGCCTCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421767.1 ENST00000638517.1 ENST00000640964.1 |
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| CDS TCA 72 bp | AGGCCAGATCGTCGCTTGGAGAGTCTGAGAAAGGCATaGGATGGACCTAAACAGACCATTGCGATTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RPDRRLESLRKA*DGPKQTIAIQH Trigger: GTGCTGAATCGCAATGGTCTGTTTAGGTCCATCTCATGCCTTTCTCAGACTCTCCAAGCGACGATCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS TCA 72 bp | AGCAATCGTGTGCTTTGTCTGCAGCTATGGCTGAAATaGGAGTGCAGGAGCCAAACTCTGAGGCAGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: SNRVLCLQLWLK*ECRSQTLRQEN Trigger: GTTCTCCTGCCTCAGAGTTTGGCTCCTGCACTCTCATTTCAGCCATAGCTGCAGACAAAGCACACGATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640964.1 |
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| CDS CAA 72 bp | GAAACTTGGTGTGGGAAGGCCGGCATAAAGCAAGAGTaGGGTCCATCAAGGATGCCACAATGCAGGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ETWCGKAGIKQE*GPSRMPQCRQK Trigger: TTTCTGCCTGCATTGTGGCATCCTTGATGGACCCAACTCTTGCTTTATGCCGGCCTTCCCACACCAAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS TCA 72 bp | TGGAAGACGTATGAGCTTGTCCTAAACTGTCCAGTGTaGAGGAAGAGTTTGGTCTGTCAAGGCCGTCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: WKTYELVLNCPV*RKSLVCQGRRV Trigger: TACCCGACGGCCTTGACAGACCAAACTCTTCCTTCACACTGGACAGTTTAGGACAAGCTCATACGTCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS CAA 90 bp | CTTTGGAACCCATGTATAGGAAAAGTCCAAATTATTAGTTGGGCATaGTGGCAAGCACGTACAGTCTCAGCCACCTGGGAGGCTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LWNPCIGKVQIISWA*WQARTVSATWEAEV Trigger: CACCTCAGCCTCCCAGGTGGCTGAGACTGTACGTGCTTGCCACAATGCCCAACTAATAATTTGGACTTTTCCTATACATGGGTTCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416572.1 ENST00000421767.1 |
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| CDS TCA 72 bp | TCACATGCATGGTTCACAATGGGGTGCATGCTCCTATaGGAATCTAATGCTGCTGCTGATCTGAGAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SHAWFTMGCMLL*ESNAAADLREG Trigger: GCCTTCTCTCAGATCAGCAGCAGCATTAGATTCTCATAGGAGCATGCACCCCATTGTGAACCATGCATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS GCA 72 bp | TTTAGACAAGGTTTACCTCCGTCTCGCAGGATGGAGTaGTGTGATGGGATCATAGCTCATTGCAGCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: FRQGLPPSRRME*CDGIIAHCSLE Trigger: TTCAAGGCTGCAATGAGCTATGATCCCATCACAGCACTCCATCCTGCGAGACGGAGGTAAACCTTGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654214.1 |
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| CDS CAA 90 bp | CGGGAGACAGGAATTGGGCCAGGAGTGGCTCACTTGAAGATAATATaGGAGAAAGTGACAGAGCATCAGGCATTAGATTCTCATAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: RETGIGPGVAHLKII*EKVTEHQALDSHRD Trigger: GTCCCTATGAGAATCTAATGCCTGATGCTCTGTCACTTTCTCCAATATTATCTTCAAGTGAGCCACTCCTGGCCCAATTCCTGTCTCCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS CAA 90 bp | TCTATAGGCCAACGGGAGACAGGAATTGGGCCAGGAGTGGCTCACTaGAAGATAATATTGGAGAAAGTGACAGAGCATCAGGCATTAGAT | + |
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Preference number: 6 (lower is better) Translates to: SIGQRETGIGPGVAH*KIILEKVTEHQALD Trigger: ATCTAATGCCTGATGCTCTGTCACTTTCTCCAATATTATCTTCAAGTGAGCCACTCCTGGCCCAATTCCTGTCTCCCGTTGGCCTATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS TCA 72 bp | ATGAGGTCACTTCCTCTATGTTTGCAGATCAGGCAGTaGAGGGTGAATATGGAACTGATGGGCAGTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: MRSLPLCLQIRQ*RVNMELMGSHW Trigger: CCAATGACTGCCCATCAGTTCCATATTCACCCTTCACTGCCTGATCTGCAAACATAGAGGAAGTGACCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640964.1 |
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| CDS CCA 72 bp | TGTATAGGAAAAGTCCAAATTATTAGTTGGGCATTGTaGCAAGCACGTACAGTCTCAGCCACCTGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: CIGKVQIISWAL*QARTVSATWEA Trigger: AGCCTCCCAGGTGGCTGAGACTGTACGTGCTTGCCACAATGCCCAACTAATAATTTGGACTTTTCCTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416572.1 ENST00000421767.1 |
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| CDS CAA 72 bp | CCATGTATAGGAAAAGTCCAAATTATTAGTTGGGCATaGTGGCAAGCACGTACAGTCTCAGCCACCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PCIGKVQIISWA*WQARTVSATWE Trigger: CTCCCAGGTGGCTGAGACTGTACGTGCTTGCCACAATGCCCAACTAATAATTTGGACTTTTCCTATACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416572.1 ENST00000421767.1 |
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| CDS TCA 72 bp | GCATTAGATTCTCCTCTATGTTTGCAGATCAGGCAGTaGAGGGTGAATATGGAACTGATGGGCAGTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: ALDSPLCLQIRQ*RVNMELMGSHW Trigger: CCAATGACTGCCCATCAGTTCCATATTCACCCTTCACTGCCTGATCTGCAAACATAGAGGAGAATCTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638517.1 |
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| CDS CCA 72 bp | TGGAACCCATGTATAGGAAAAGTCCAAATTATTAGTTaGGCATTGTGGCAAGCACGTACAGTCTCAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: WNPCIGKVQIIS*ALWQARTVSAT Trigger: GGTGGCTGAGACTGTACGTGCTTGCCACAATGCCCAACTAATAATTTGGACTTTTCCTATACATGGGTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416572.1 ENST00000421767.1 |
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| CDS CAA 72 bp | GGAATTGGGCCAGGAGTGGCTCACTTGAAGATAATATaGGAGAAAGTGACAGAGCATCAGGCATTAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: GIGPGVAHLKII*EKVTEHQALDS Trigger: AGAATCTAATGCCTGATGCTCTGTCACTTTCTCCAATATTATCTTCAAGTGAGCCACTCCTGGCCCAATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421767.1 |
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| CDS CCA 72 bp | ATGACTGTATATCTGGAAGGCTTTATTGCAGTGATGTaGAACCAAACCCGTAACATCTCCAAAGTATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: MTVYLEGFIAVM*NQTRNISKVCL Trigger: CAGGCATACTTTGGAGATGTTACGGGTTTGGTTCCACATCACTGCAATAAAGCCTTCCAGATATACAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000442578.5 ENST00000638517.1 ENST00000639086.1 ENST00000640964.1 |
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| CDS GCA 72 bp | ATGGAGTCTAGTTCTGTAGTAACTGGAATTAGTAACTaGACACCACCGCACTCGGTTAATTTATTTACTGAG | + |
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Preference number: 6 (lower is better) Translates to: MESSSVVTGISN*TPPHSVNLFTE Trigger: CTCAGTAAATAAATTAACCGAGTGCGGTGGTGTGCAGTTACTAATTCCAGTTACTACAGAACTAGACTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638517.1 |
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