Pregenerated sensors for LINC00163 (Homo sapiens)
Ensembl gene IDs: ENSG00000234880Ensembl transcript IDs: ENST00000434081.1, ENST00000439088.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCGCGTCACAGTGGCGTTCGCGGTGAGGATGGGGCGTTGCCGTTaGCCGGTGTCTCAGCGCACTGGCTGTCGGGCTGGTCCCCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: QRVTVAFAVRMGRCR*PVSQRTGCRAGPPG Trigger: CCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCGAACGCCACTGTGACGCGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | CGCGGTGAGGATGGGGCGTTGCCGTTGGCCGGTGTCTCAGCGCACTaGCTGTCGGGCTGGTCCCCCTGGGTTCGCTGCTGGCGTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: RGEDGALPLAGVSAH*LSGWSPWVRCWRAC Trigger: ACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 90 bp | TGTACGTCGGACGGTGGGGCCGGCCTGCGCCCCGCAAGCAGGAGCTaGGCCCTGGGCCTGCAGATTCTGTGGTGTGTCGGTGCAGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: CTSDGGAGLRPASRS*ALGLQILWCVGAVL Trigger: GAGCACTGCACCGACACACCACAGAATCTGCAGGCCCAGGGCTCAGCTCCTGCTTGCGGGGCGCAGGCCGGCCCCACCGTCCGACGTACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 90 bp | CGGAGGATCCGTCCCAGGAGGGTCAGGAGCAGTCCTGGGGCCGGATaGCCATGGCGTCCCCGGACCATTCTCTGGAGCTGGCAGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: RRIRPRRVRSSPGAG*PWRPRTILWSWQPG Trigger: CCCAGGCTGCCAGCTCCAGAGAATGGTCCGGGGACGCCATGGTCATCCGGCCCCAGGACTGCTCCTGACCCTCCTGGGACGGATCCTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | CACTGTCAGCGCGTCACAGTGGCGTTCGCGGTGAGGATGGGGCGTTaGCGTTGGCCGGTGTCTCAGCGCACTGGCTGTCGGGCTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: HCQRVTVAFAVRMGR*RWPVSQRTGCRAGP Trigger: GGGACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCGAACGCCACTGTGACGCGCTGACAGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | GGGGCGTTGCCGTTGGCCGGTGTCTCAGCGCACTGGCTGTCGGGCTaGTCCCCCTGGGTTCGCTGCTGGCGTGCTTGTTCTCCGAGCACT | + |
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Preference number: 5 (lower is better) Translates to: GALPLAGVSAHWLSG*SPWVRCWRACSPST Trigger: AGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | CGGACGGTGGGGCCGGCCTGCGCCCCGCAAGCAGGAGCTGAGCCCTaGGCCTGCAGATTCTGTGGTGTGTCGGTGCAGTGCTCAGCATCA | + |
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Preference number: 5 (lower is better) Translates to: RTVGPACAPQAGAEP*ACRFCGVSVQCSAS Trigger: TGATGCTGAGCACTGCACCGACACACCACAGAATCTGCAGGCCCAGGGCTCAGCTCCTGCTTGCGGGGCGCAGGCCGGCCCCACCGTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 90 bp | GGTCTCTGCTGCACTTTCCCGAAGGCTGAGGTCCCTGGGGACCACTaGGCCGCCCCATGGGCCTTCCACAGCACTGCCGGTGCCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GLCCTFPKAEVPGDH*AAPWAFHSTAGARG Trigger: CCCTCTGGCACCGGCAGTGCTGTGGAAGGCCCATGGGGCGGCTCAGTGGTCCCCAGGGACCTCAGCCTTCGGGAAAGTGCAGCAGAGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | CTAAGGTGCCCATGCTGGTCTGTACGTCGGACGGTGGGGCCGGCCTaGGCCCCGCAAGCAGGAGCTGAGCCCTGGGCCTGCAGATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LRCPCWSVRRTVGPA*APQAGAEPWACRFC Trigger: ACAGAATCTGCAGGCCCAGGGCTCAGCTCCTGCTTGCGGGGCGCAGGCCGGCCCCACCGTCCGACGTACAGACCAGCATGGGCACCTTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | CCGTTGGCCGGTGTCTCAGCGCACTGGCTGTCGGGCTGGTCCCCCTaGGTTCGCTGCTGGCGTGCTTGTTCTCCGAGCACTCGCCGTTCA | + |
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Preference number: 5 (lower is better) Translates to: PLAGVSAHWLSGWSP*VRCWRACSPSTRRS Trigger: TGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | TGGGGACCACTGAGCCGCCCCATGGGCCTTCCACAGCACTGCCGGTaGCAGAGGGCAGAACTCGGACCGACTCTTGCCTCATCTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: WGPLSRPMGLPQHCR*QRAELGPTLASSAL Trigger: GAGGGCAGATGAGGCAAGAGTCGGTCCGAGTTCTGCCCTCTGGCACCGGCAGTGCTGTGGAAGGCCCATGGGGCGGCTCAGTGGTCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | GGTCCCTGGGGACCACTGAGCCGCCCCATGGGCCTTCCACAGCACTaGCGGTGCCAGAGGGCAGAACTCGGACCGACTCTTGCCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: GPWGPLSRPMGLPQH*RCQRAELGPTLASS Trigger: AGATGAGGCAAGAGTCGGTCCGAGTTCTGCCCTCTGGCACCGGCAGTGCTGTGGAAGGCCCATGGGGCGGCTCAGTGGTCCCCAGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | AGCGCACTGGCTGTCGGGCTGGTCCCCCTGGGTTCGCTGCTGGCGTaGTTGTTCTCCGAGCACTCGCCGTTCACGTCCTCTCCGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: SALAVGLVPLGSLLA*LFSEHSPFTSSPFH Trigger: GTGGAACGGAGAGGACGTGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | GGTGTCTCAGCGCACTGGCTGTCGGGCTGGTCCCCCTGGGTTCGCTaGTGGCGTGCTTGTTCTCCGAGCACTCGCCGTTCACGTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: GVSAHWLSGWSPWVR*WRACSPSTRRSRPL Trigger: GAGAGGACGTGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGACACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | GTCTCAGCGCACTGGCTGTCGGGCTGGTCCCCCTGGGTTCGCTGCTaGCGTGCTTGTTCTCCGAGCACTCGCCGTTCACGTCCTCTCCGT | + |
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Preference number: 5 (lower is better) Translates to: VSAHWLSGWSPWVRC*RACSPSTRRSRPLR Trigger: ACGGAGAGGACGTGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 90 bp | CACGCATTCGCATCCACTGTCAGCGCGTCACAGTGGCGTTCGCGGTaGGGATGGGGCGTTGCCGTTGGCCGGTGTCTCAGCGCACTGGCT | + |
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Preference number: 5 (lower is better) Translates to: HAFASTVSASQWRSR*GWGVAVGRCLSALA Trigger: AGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCGAACGCCACTGTGACGCGCTGACAGTGGATGCGAATGCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | CACAGGGAGTCCAGCCGAGGTTCGGAGGGTGGTCAGGGGTCTGGCTaGCCCAAGGGGGTGCTTCTCAGAGCTTTGGGAAGACACCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: HRESSRGSEGGQGSG*PKGVLLRALGRHRS Trigger: GCTCCGGTGTCTTCCCAAAGCTCTGAGAAGCACCCCCTTGGGGCAGCCAGACCCCTGACCACCCTCCGAACCTCGGCTGGACTCCCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 90 bp | CAACTGTCCAGGGGCCTGGGGCATCCATGGGCCACACGGCAGCGCTaGAAACACAGGGCCCTTGCACCCAGGGCAGACCTCAGCACAGTT | + |
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Preference number: 5 (lower is better) Translates to: QLSRGLGHPWATRQR*KHRALAPRADLSTV Trigger: AACTGTGCTGAGGTCTGCCCTGGGTGCAAGGGCCCTGTGTTTTCAGCGCTGCCGTGTGGCCCATGGATGCCCCAGGCCCCTGGACAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | CTGCCGGTGCCAGAGGGCAGAACTCGGACCGACTCTTGCCTCATCTaGCCTCTGTTCCGAGGAGAACCCTTCCGGACTGGGCCACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LPVPEGRTRTDSCLI*PLFRGEPFRTGPQG Trigger: TCCCTGTGGCCCAGTCCGGAAGGGTTCTCCTCGGAACAGAGGGCAGATGAGGCAAGAGTCGGTCCGAGTTCTGCCCTCTGGCACCGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | CTCTTGCCTCATCTGCCCTCTGTTCCGAGGAGAACCCTTCCGGACTaGGCCACAGGGAGTCCAGCCGAGGTTCGGAGGGTGGTCAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LLPHLPSVPRRTLPD*ATGSPAEVRRVVRG Trigger: ACCCCTGACCACCCTCCGAACCTCGGCTGGACTCCCTGTGGCCCAGTCCGGAAGGGTTCTCCTCGGAACAGAGGGCAGATGAGGCAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | GACATCACTCCTGCCCTCCTTGCGCTCGGCCCGAGAGCTAGAGCTTaGTCAGCTCAGCCCCAGGAGGAAGCAGAACCGCAGCCTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: DITPALLALGPRARA*SAQPQEEAEPQPPE Trigger: TTCTGGAGGCTGCGGTTCTGCTTCCTCCTGGGGCTGAGCTGAGCAAGCTCTAGCTCTCGGGCCGAGCGCAAGGAGGGCAGGAGTGATGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | GGGGCATCCATGGGCCACACGGCAGCGCTGAAAACACAGGGCCCTTaGACCCAGGGCAGACCTCAGCACAGTTGGAGACATCACTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GASMGHTAALKTQGP*TQGRPQHSWRHHSC Trigger: GCAGGAGTGATGTCTCCAACTGTGCTGAGGTCTGCCCTGGGTGCAAGGGCCCTGTGTTTTCAGCGCTGCCGTGTGGCCCATGGATGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | TCCACAGCACTGCCGGTGCCAGAGGGCAGAACTCGGACCGACTCTTaGCTCATCTGCCCTCTGTTCCGAGGAGAACCCTTCCGGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: STALPVPEGRTRTDS*LICPLFRGEPFRTG Trigger: CCCAGTCCGGAAGGGTTCTCCTCGGAACAGAGGGCAGATGAGGCAAGAGTCGGTCCGAGTTCTGCCCTCTGGCACCGGCAGTGCTGTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | GGGGTGCTTCTCAGAGCTTTGGGAAGACACCGGAGCCCAAGGGTCTaGATGGCCGTGGCTGAGCTGGGTCTGAGAGGCCAAGACCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GVLLRALGRHRSPRV*MAVAELGLRGQDQE Trigger: CTCCTGGTCTTGGCCTCTCAGACCCAGCTCAGCCACGGCCATCCAGACCCTTGGGCTCCGGTGTCTTCCCAAAGCTCTGAGAAGCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | GTCCCCGGACCATTCTCTGGAGCTGGCAGCCTGGGGCAAGGCACGTaGCCTCTCTGTGCAGCACCTGGCTCTTGTGTAACACGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: VPGPFSGAGSLGQGT*PLCAAPGSCVTRMV Trigger: CACCATCCGTGTTACACAAGAGCCAGGTGCTGCACAGAGAGGCCACGTGCCTTGCCCCAGGCTGCCAGCTCCAGAGAATGGTCCGGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 90 bp | AGCTTTGGGAAGACACCGGAGCCCAAGGGTCTGGATGGCCGTGGCTaGGCTGGGTCTGAGAGGCCAAGACCAGGAGGGCATCACATGCAC | + |
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Preference number: 5 (lower is better) Translates to: SFGKTPEPKGLDGRG*AGSERPRPGGHHMH Trigger: GTGCATGTGATGCCCTCCTGGTCTTGGCCTCTCAGACCCAGCTCAGCCACGGCCATCCAGACCCTTGGGCTCCGGTGTCTTCCCAAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | GGAGCTGAGCCCTGGGCCTGCAGATTCTGTGGTGTGTCGGTGCAGTaGTCAGCATCAGCCGTGACGGTCACACTGGCACTCGCTGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GAEPWACRFCGVSVQ*SASAVTVTLALAVC Trigger: ACAGACAGCGAGTGCCAGTGTGACCGTCACGGCTGATGCTGAGCACTGCACCGACACACCACAGAATCTGCAGGCCCAGGGCTCAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | TTTGCTATTTTCTCCACGCGGGTCTTATGGATGCTGTCCGAGCTGTaGAGCATCTGCCCTCCTGGCCCTCCTGCAGCTCGGGCTGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: FAIFSTRVLWMLSEL*SICPPGPPAARAVL Trigger: GAGCACAGCCCGAGCTGCAGGAGGGCCAGGAGGGCAGATGCTCCACAGCTCGGACAGCATCCATAAGACCCGCGTGGAGAAAATAGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 90 bp | CCTGCAGATTCTGTGGTGTGTCGGTGCAGTGCTCAGCATCAGCCGTaGCGGTCACACTGGCACTCGCTGTCTGTGTCACGCATTCGCATC | + |
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Preference number: 5 (lower is better) Translates to: PADSVVCRCSAQHQP*RSHWHSLSVSRIRI Trigger: GATGCGAATGCGTGACACAGACAGCGAGTGCCAGTGTGACCGTCACGGCTGATGCTGAGCACTGCACCGACACACCACAGAATCTGCAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | GTTCCACACTGGCCTTTGCTATTTTCTCCACGCGGGTCTTATGGATaGTGTCCGAGCTGTGGAGCATCTGCCCTCCTGGCCCTCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: VPHWPLLFSPRGSYG*CPSCGASALLALLQ Trigger: CTGCAGGAGGGCCAGGAGGGCAGATGCTCCACAGCTCGGACAGCATCCATAAGACCCGCGTGGAGAAAATAGCAAAGGCCAGTGTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | CTCCGTTCCACACTGGCCTTTGCTATTTTCTCCACGCGGGTCTTATaGATGCTGTCCGAGCTGTGGAGCATCTGCCCTCCTGGCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LRSTLAFAIFSTRVL*MLSELWSICPPGPP Trigger: AGGAGGGCCAGGAGGGCAGATGCTCCACAGCTCGGACAGCATCCATAAGACCCGCGTGGAGAAAATAGCAAAGGCCAGTGTGGAACGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | GCTGAGGAAGCAGACCGTTGTGCGAGGGGAGATGAAAGCCAGGCTTaGCTTGGCAGACGGAAAACAGCCGCTGTGATAAACCCAAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: AEEADRCARGDESQA*LGRRKTAAVINPRP Trigger: CGGCCTTGGGTTTATCACAGCGGCTGTTTTCCGTCTGCCAAGCCAAGCCTGGCTTTCATCTCCCCTCGCACAACGGTCTGCTTCCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 90 bp | TCCGAGCACTCGCCGTTCACGTCCTCTCCGTTCCACACTGGCCTTTaGTATTTTCTCCACGCGGGTCTTATGGATGCTGTCCGAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SEHSPFTSSPFHTGL*YFLHAGLMDAVRAV Trigger: CACAGCTCGGACAGCATCCATAAGACCCGCGTGGAGAAAATAGCAAAGGCCAGTGTGGAACGGAGAGGACGTGAACGGCGAGTGCTCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 90 bp | CTTGTTCTCCGAGCACTCGCCGTTCACGTCCTCTCCGTTCCACACTaGCCTTTGCTATTTTCTCCACGCGGGTCTTATGGATGCTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: LVLRALAVHVLSVPH*PLLFSPRGSYGCCP Trigger: CGGACAGCATCCATAAGACCCGCGTGGAGAAAATAGCAAAGGCCAGTGTGGAACGGAGAGGACGTGAACGGCGAGTGCTCGGAGAACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | CCATGCTGGTCTGTACGTCGGACGGTGGGGCCGGCCTaGGCCCCGCAAGCAGGAGCTGAGCCCTGGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PCWSVRRTVGPA*APQAGAEPWAC Trigger: GCAGGCCCAGGGCTCAGCTCCTGCTTGCGGGGCGCAGGCCGGCCCCACCGTCCGACGTACAGACCAGCATGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | GGGCATCACATGCACCCGTGTCAGGGCCAGCTGGGATaGGAGACTGAGGCCGGGGCGGGTGTCCGGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GHHMHPCQGQLG*ETEAGAGVRVP Trigger: GGGCACCCGGACACCCGCCCCGGCCTCAGTCTCCCATCCCAGCTGGCCCTGACACGGGTGCATGTGATGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | GATGGGGCGTTGCCGTTGGCCGGTGTCTCAGCGCACTaGCTGTCGGGCTGGTCCCCCTGGGTTCGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: DGALPLAGVSAH*LSGWSPWVRCW Trigger: CCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | GGGCCGGCCTGCGCCCCGCAAGCAGGAGCTGAGCCCTaGGCCTGCAGATTCTGTGGTGTGTCGGTGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: GPACAPQAGAEP*ACRFCGVSVQC Trigger: GCACTGCACCGACACACCACAGAATCTGCAGGCCCAGGGCTCAGCTCCTGCTTGCGGGGCGCAGGCCGGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 90 bp | CCACTGTCAGCGCGTCACAGTGGCGTTCGCGGTGAGGATGGGGCGTaGCCGTTGGCCGGTGTCTCAGCGCACTGGCTGTCGGGCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PLSARHSGVRGEDGA*PLAGVSAHWLSGWS Trigger: GGACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCGAACGCCACTGTGACGCGCTGACAGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | CGCGTCACAGTGGCGTTCGCGGTGAGGATGGGGCGTTaGCGTTGGCCGGTGTCTCAGCGCACTGGCTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RVTVAFAVRMGR*RWPVSQRTGCR Trigger: CCGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCGAACGCCACTGTGACGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 72 bp | GCGCGTCACAGTGGCGTTCGCGGTGAGGATGGGGCGTaGCCGTTGGCCGGTGTCTCAGCGCACTGGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: ARHSGVRGEDGA*PLAGVSAHWLS Trigger: CGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCGAACGCCACTGTGACGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 72 bp | AGGGGCCTGGGGCATCCATGGGCCACACGGCAGCGCTaGAAACACAGGGCCCTTGCACCCAGGGCAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: RGLGHPWATRQR*KHRALAPRADL Trigger: GAGGTCTGCCCTGGGTGCAAGGGCCCTGTGTTTTCAGCGCTGCCGTGTGGCCCATGGATGCCCCAGGCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | GCGCACTGGCTGTCGGGCTGGTCCCCCTGGGTTCGCTaGTGGCGTGCTTGTTCTCCGAGCACTCGCCGTTCA | + |
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Preference number: 6 (lower is better) Translates to: AHWLSGWSPWVR*WRACSPSTRRS Trigger: TGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | CCGTTGGCCGGTGTCTCAGCGCACTGGCTGTCGGGCTaGTCCCCCTGGGTTCGCTGCTGGCGTGCTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PLAGVSAHWLSG*SPWVRCWRACS Trigger: AGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | ACAGTGGCGTTCGCGGTGAGGATGGGGCGTTGCCGTTaGCCGGTGTCTCAGCGCACTGGCTGTCGGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TVAFAVRMGRCR*PVSQRTGCRAG Trigger: ACCAGCCCGACAGCCAGTGCGCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCGAACGCCACTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 72 bp | GTCGGGCTGGTCCCCCTGGGTTCGCTGCTGGCGTGCTaGTTCTCCGAGCACTCGCCGTTCACGTCCTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: VGLVPLGSLLAC*FSEHSPFTSSP Trigger: CGGAGAGGACGTGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 72 bp | TGCACTTTCCCGAAGGCTGAGGTCCCTGGGGACCACTaGGCCGCCCCATGGGCCTTCCACAGCACTGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: CTFPKAEVPGDH*AAPWAFHSTAG Trigger: ACCGGCAGTGCTGTGGAAGGCCCATGGGGCGGCTCAGTGGTCCCCAGGGACCTCAGCCTTCGGGAAAGTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 72 bp | GCATCCACTGTCAGCGCGTCACAGTGGCGTTCGCGGTaGGGATGGGGCGTTGCCGTTGGCCGGTGTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASTVSASQWRSR*GWGVAVGRCLS Trigger: GCTGAGACACCGGCCAACGGCAACGCCCCATCCTCACCGCGAACGCCACTGTGACGCGCTGACAGTGGATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | CCTGCCCTCCTTGCGCTCGGCCCGAGAGCTAGAGCTTaGTCAGCTCAGCCCCAGGAGGAAGCAGAACCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PALLALGPRARA*SAQPQEEAEPQ Trigger: CTGCGGTTCTGCTTCCTCCTGGGGCTGAGCTGAGCAAGCTCTAGCTCTCGGGCCGAGCGCAAGGAGGGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | GGACCACTGAGCCGCCCCATGGGCCTTCCACAGCACTaGCGGTGCCAGAGGGCAGAACTCGGACCGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: GPLSRPMGLPQH*RCQRAELGPTL Trigger: AAGAGTCGGTCCGAGTTCTGCCCTCTGGCACCGGCAGTGCTGTGGAAGGCCCATGGGGCGGCTCAGTGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | GCTGTCGGGCTGGTCCCCCTGGGTTCGCTGCTGGCGTaGTTGTTCTCCGAGCACTCGCCGTTCACGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: AVGLVPLGSLLA*LFSEHSPFTSS Trigger: AGAGGACGTGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | CACTGGCTGTCGGGCTGGTCCCCCTGGGTTCGCTGCTaGCGTGCTTGTTCTCCGAGCACTCGCCGTTCACGT | + |
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Preference number: 6 (lower is better) Translates to: HWLSGWSPWVRC*RACSPSTRRSR Trigger: ACGTGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | GGTGTCTCAGCGCACTGGCTGTCGGGCTGGTCCCCCTaGGTTCGCTGCTGGCGTGCTTGTTCTCCGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: GVSAHWLSGWSP*VRCWRACSPST Trigger: AGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGCGCTGAGACACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | ATGGCGTCCCCGGACCATTCTCTGGAGCTGGCAGCCTaGGGCAAGGCACGTGGCCTCTCTGTGCAGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: MASPDHSLELAA*GKARGLSVQHL Trigger: CAGGTGCTGCACAGAGAGGCCACGTGCCTTGCCCCAGGCTGCCAGCTCCAGAGAATGGTCCGGGGACGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 90 bp | GCACTGGCTGTCGGGCTGGTCCCCCTGGGTTCGCTGCTGGCGTGCTaGTTCTCCGAGCACTCGCCGTTCACGTCCTCTCCGTTCCACACT | + |
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Preference number: 6 (lower is better) Translates to: ALAVGLVPLGSLLAC*FSEHSPFTSSPFHT Trigger: AGTGTGGAACGGAGAGGACGTGAACGGCGAGTGCTCGGAGAACAAGCACGCCAGCAGCGAACCCAGGGGGACCAGCCCGACAGCCAGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | CGGGTCTTATGGATGCTGTCCGAGCTGTGGAGCATCTaGCCTCCTGGCCCTCCTGCAGCTCGGGCTGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RVLWMLSELWSI*PPGPPAARAVL Trigger: GAGCACAGCCCGAGCTGCAGGAGGGCCAGGAGGGCAGATGCTCCACAGCTCGGACAGCATCCATAAGACCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | GGTCTGGCTGCCCCAAGGGGGTGCTTCTCAGAGCTTTaGGAAGACACCGGAGCCCAAGGGTCTGGATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GLAAPRGCFSEL*EDTGAQGSGWP Trigger: CGGCCATCCAGACCCTTGGGCTCCGGTGTCTTCCCAAAGCTCTGAGAAGCACCCCCTTGGGGCAGCCAGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | CATCTGCCCTCTGTTCCGAGGAGAACCCTTCCGGACTaGGCCACAGGGAGTCCAGCCGAGGTTCGGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: HLPSVPRRTLPD*ATGSPAEVRRV Trigger: CACCCTCCGAACCTCGGCTGGACTCCCTGTGGCCCAGTCCGGAAGGGTTCTCCTCGGAACAGAGGGCAGATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 72 bp | GGGTCTGGCTGCCCCAAGGGGGTGCTTCTCAGAGCTTaGGGAAGACACCGGAGCCCAAGGGTCTGGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSGCPKGVLLRA*GRHRSPRVWMA Trigger: GGCCATCCAGACCCTTGGGCTCCGGTGTCTTCCCAAAGCTCTGAGAAGCACCCCCTTGGGGCAGCCAGACCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 90 bp | CCAGGGCAGACCTCAGCACAGTTGGAGACATCACTCCTGCCCTCCTaGCGCTCGGCCCGAGAGCTAGAGCTTGCTCAGCTCAGCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PGQTSAQLETSLLPS*RSARELELAQLSPR Trigger: CCTGGGGCTGAGCTGAGCAAGCTCTAGCTCTCGGGCCGAGCGCAAGGAGGGCAGGAGTGATGTCTCCAACTGTGCTGAGGTCTGCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | TCCAGCCGAGGTTCGGAGGGTGGTCAGGGGTCTGGCTaGCCCAAGGGGGTGCTTCTCAGAGCTTTGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSRGSEGGQGSG*PKGVLLRALGR Trigger: TCTTCCCAAAGCTCTGAGAAGCACCCCCTTGGGGCAGCCAGACCCCTGACCACCCTCCGAACCTCGGCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | AGCTGGCAGCCTGGGGCAAGGCACGTGGCCTCTCTGTaGAGCACCTGGCTCTTGTGTAACACGGATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SWQPGARHVASL*STWLLCNTDGG Trigger: GCCACCATCCGTGTTACACAAGAGCCAGGTGCTGCACAGAGAGGCCACGTGCCTTGCCCCAGGCTGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | TTCTCCACGCGGGTCTTATGGATGCTGTCCGAGCTGTaGAGCATCTGCCCTCCTGGCCCTCCTGCAGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: FSTRVLWMLSEL*SICPPGPPAAR Trigger: CCGAGCTGCAGGAGGGCCAGGAGGGCAGATGCTCCACAGCTCGGACAGCATCCATAAGACCCGCGTGGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | CCTGGGGCAAGGCACGTGGCCTCTCTGTGCAGCACCTaGCTCTTGTGTAACACGGATGGTGGCAGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PGARHVASLCST*LLCNTDGGRLW Trigger: CCAGAGCCTGCCACCATCCGTGTTACACAAGAGCCAGGTGCTGCACAGAGAGGCCACGTGCCTTGCCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 90 bp | TGGGGCATCCATGGGCCACACGGCAGCGCTGAAAACACAGGGCCCTaGCACCCAGGGCAGACCTCAGCACAGTTGGAGACATCACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: WGIHGPHGSAENTGP*HPGQTSAQLETSLL Trigger: CAGGAGTGATGTCTCCAACTGTGCTGAGGTCTGCCCTGGGTGCAAGGGCCCTGTGTTTTCAGCGCTGCCGTGTGGCCCATGGATGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 90 bp | TTCCACAGCACTGCCGGTGCCAGAGGGCAGAACTCGGACCGACTCTaGCCTCATCTGCCCTCTGTTCCGAGGAGAACCCTTCCGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: FHSTAGARGQNSDRL*PHLPSVPRRTLPDW Trigger: CCAGTCCGGAAGGGTTCTCCTCGGAACAGAGGGCAGATGAGGCAAGAGTCGGTCCGAGTTCTGCCCTCTGGCACCGGCAGTGCTGTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | CCAGAGGGCAGAACTCGGACCGACTCTTGCCTCATCTaGCCTCTGTTCCGAGGAGAACCCTTCCGGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: PEGRTRTDSCLI*PLFRGEPFRTG Trigger: CCCAGTCCGGAAGGGTTCTCCTCGGAACAGAGGGCAGATGAGGCAAGAGTCGGTCCGAGTTCTGCCCTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | CCCTGGGCCTGCAGATTCTGTGGTGTGTCGGTGCAGTaGTCAGCATCAGCCGTGACGGTCACACTGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: PWACRFCGVSVQ*SASAVTVTLAL Trigger: GAGTGCCAGTGTGACCGTCACGGCTGATGCTGAGCACTGCACCGACACACCACAGAATCTGCAGGCCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | CTCAGAGCTTTGGGAAGACACCGGAGCCCAAGGGTCTaGATGGCCGTGGCTGAGCTGGGTCTGAGAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LRALGRHRSPRV*MAVAELGLRGQ Trigger: TTGGCCTCTCAGACCCAGCTCAGCCACGGCCATCCAGACCCTTGGGCTCCGGTGTCTTCCCAAAGCTCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 72 bp | GCAAGGCACGTGGCCTCTCTGTGCAGCACCTGGCTCTaGTGTAACACGGATGGTGGCAGGCTCTGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ARHVASLCSTWL*CNTDGGRLWAE Trigger: CTCTGCCCAGAGCCTGCCACCATCCGTGTTACACAAGAGCCAGGTGCTGCACAGAGAGGCCACGTGCCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 72 bp | TCTGTGGTGTGTCGGTGCAGTGCTCAGCATCAGCCGTaGCGGTCACACTGGCACTCGCTGTCTGTGTCACGC | + |
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Preference number: 6 (lower is better) Translates to: SVVCRCSAQHQP*RSHWHSLSVSR Trigger: GCGTGACACAGACAGCGAGTGCCAGTGTGACCGTCACGGCTGATGCTGAGCACTGCACCGACACACCACAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 72 bp | CCGGGAGCCAAAACTCAGCAGCTGTGCTGGTTCTGGTaGGCCTGTCAGGTGACACACCCTGGCTGTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PGAKTQQLCWFW*ACQVTHPGCLL Trigger: GAGGAGACAGCCAGGGTGTGTCACCTGACAGGCTCACCAGAACCAGCACAGCTGCTGAGTTTTGGCTCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439088.1 |
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| CDS CCA 72 bp | CCATTCTCTGGAGCTGGCAGCCTGGGGCAAGGCACGTaGCCTCTCTGTGCAGCACCTGGCTCTTGTGTAACA | + |
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Preference number: 6 (lower is better) Translates to: PFSGAGSLGQGT*PLCAAPGSCVT Trigger: TGTTACACAAGAGCCAGGTGCTGCACAGAGAGGCCACGTGCCTTGCCCCAGGCTGCCAGCTCCAGAGAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CAA 72 bp | ACCTCAGCACAGTTGGAGACATCACTCCTGCCCTCCTaGCGCTCGGCCCGAGAGCTAGAGCTTGCTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: TSAQLETSLLPS*RSARELELAQL Trigger: GAGCTGAGCAAGCTCTAGCTCTCGGGCCGAGCGCAAGGAGGGCAGGAGTGATGTCTCCAACTGTGCTGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS TCA 72 bp | GGAGCCAAAACTCAGCAGCTGCTGTGCTGGTTCTGGTaGGCCTGTCAGGTGACACACCCTGGCTGTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GAKTQQLLCWFW*ACQVTHPGCLL Trigger: GAGGAGACAGCCAGGGTGTGTCACCTGACAGGCTCACCAGAACCAGCACAGCAGCTGCTGAGTTTTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434081.1 |
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| CDS CAA 90 bp | CTCCGAGCACTCGCCGTTCACGTCCTCTCCGTTCCACACTGGCCTTaGCTATTTTCTCCACGCGGGTCTTATGGATGCTGTCCGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LRALAVHVLSVPHWP*LFSPRGSYGCCPSC Trigger: ACAGCTCGGACAGCATCCATAAGACCCGCGTGGAGAAAATAGCAAAGGCCAGTGTGGAACGGAGAGGACGTGAACGGCGAGTGCTCGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS GCA 72 bp | TGGCCTTTGCTATTTTCTCCACGCGGGTCTTATGGATaGTGTCCGAGCTGTGGAGCATCTGCCCTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WPLLFSPRGSYG*CPSCGASALLA Trigger: GGCCAGGAGGGCAGATGCTCCACAGCTCGGACAGCATCCATAAGACCCGCGTGGAGAAAATAGCAAAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | GCAGACCGTTGTGCGAGGGGAGATGAAAGCCAGGCTTaGCTTGGCAGACGGAAAACAGCCGCTGTGATAAAC | + |
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Preference number: 6 (lower is better) Translates to: ADRCARGDESQA*LGRRKTAAVIN Trigger: GTTTATCACAGCGGCTGTTTTCCGTCTGCCAAGCCAAGCCTGGCTTTCATCTCCCCTCGCACAACGGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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| CDS CCA 72 bp | ACACTGGCCTTTGCTATTTTCTCCACGCGGGTCTTATaGATGCTGTCCGAGCTGTGGAGCATCTGCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TLAFAIFSTRVL*MLSELWSICPP Trigger: AGGAGGGCAGATGCTCCACAGCTCGGACAGCATCCATAAGACCCGCGTGGAGAAAATAGCAAAGGCCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434081.1 ENST00000439088.1 |
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