Pregenerated sensors for LINC00158 (Homo sapiens)
Ensembl gene IDs: ENSG00000185433Ensembl transcript IDs: ENST00000332587.8, ENST00000439840.2, ENST00000440205.5, ENST00000441013.5, ENST00000652840.1, ENST00000653079.1, ENST00000655536.1, ENST00000657301.1, ENST00000659435.1, ENST00000659593.1, ENST00000659748.1, ENST00000662287.1, ENST00000662610.1, ENST00000662734.1, ENST00000662827.1, ENST00000664370.1, ENST00000665160.1, ENST00000665829.1, ENST00000667265.1, ENST00000668015.1, ENST00000668944.1, ENST00000669436.1, ENST00000670098.1, ENST00000671034.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCCAAGCAGGGTGCGAACCATCCAACTCCAAGCAAAGCCTGTGCTaGCGCAACTCTGCCTCACGGACTCAAAGACTGTCACTGGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: CQAGCEPSNSKQSLC*RNSASRTQRLSLVV Trigger: GACCACCAGTGACAGTCTTTGAGTCCGTGAGGCAGAGTTGCGGCAGCACAGGCTTTGCTTGGAGTTGGATGGTTCGCACCCTGCTTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000657301.1 ENST00000659593.1 ENST00000662287.1 ENST00000664370.1 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS GCA 90 bp | CCATGCCAAGCAGGGTGCGAACCATCCAACTCCAAGCAAAGCCTGTaGTGCCGCAACTCTGCCTCACGGACTCAAAGACTGTCACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PCQAGCEPSNSKQSL*CRNSASRTQRLSLV Trigger: CACCAGTGACAGTCTTTGAGTCCGTGAGGCAGAGTTGCGGCAGCACAGGCTTTGCTTGGAGTTGGATGGTTCGCACCCTGCTTGGCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000657301.1 ENST00000659593.1 ENST00000662287.1 ENST00000664370.1 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS CCA 90 bp | AGTCCAGAAATGAATCAGAGCAACTGTCCTTCATCCCTGAGGTGTTaGCAGGGAGGCTGGACTTCCAGCCTCACTCCTCAAGTCCCCACT | + |
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Preference number: 5 (lower is better) Translates to: SPEMNQSNCPSSLRC*QGGWTSSLTPQVPT Trigger: AGTGGGGACTTGAGGAGTGAGGCTGGAAGTCCAGCCTCCCTGCCAACACCTCAGGGATGAAGGACAGTTGCTCTGATTCATTTCTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668944.1 |
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| CDS TCA 90 bp | AGGCCTCATCTCATCTCTCAGTTCCAAAGAGCTAATCTTCATCCCTaGGGTGTTGGCAGGGAGGCTGGACTTCCAGCCTCACTCCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: RPHLISQFQRANLHP*GVGREAGLPASLLK Trigger: CTTGAGGAGTGAGGCTGGAAGTCCAGCCTCCCTGCCAACACCTCAGGGATGAAGATTAGCTCTTTGGAACTGAGAGATGAGATGAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657301.1 ENST00000659593.1 |
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| CDS GCA 90 bp | GTGCGAACCATCCAACTCCAAGCAAAGCCTGTGCTGCCGCAACTCTaGCTCACGGACTCAAAGACTGTCACTGGTGGTCACAGAATTAGT | + |
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Preference number: 5 (lower is better) Translates to: VRTIQLQAKPVLPQL*LTDSKTVTGGHRIS Trigger: ACTAATTCTGTGACCACCAGTGACAGTCTTTGAGTCCGTGAGGCAGAGTTGCGGCAGCACAGGCTTTGCTTGGAGTTGGATGGTTCGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000657301.1 ENST00000659593.1 ENST00000662287.1 ENST00000664370.1 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS CCA 90 bp | TCTCCTTGTTTTTCTCCTTCATCCCTGAGGTGTTGGCAGGGAGGCTaGACTTCCAGCCTCACTCCTCAAGTCCCCACTAGCTTATCAACA | + |
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Preference number: 5 (lower is better) Translates to: SPCFSPSSLRCWQGG*TSSLTPQVPTSLST Trigger: TGTTGATAAGCTAGTGGGGACTTGAGGAGTGAGGCTGGAAGTCCAGCCTCCCTGCCAACACCTCAGGGATGAAGGAGAAAAACAAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671034.1 |
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| CDS TCA 90 bp | CACTCACACCACCATCTCCCACCATCAAAATTATTCGTACCAGTGTaGCTAGAGGCCTGCTGGATTCTCCCCTCATCCACTCAGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: HSHHHLPPSKLFVPV*LEACWILPSSTQRM Trigger: CATCCTCTGAGTGGATGAGGGGAGAATCCAGCAGGCCTCTAGTCACACTGGTACGAATAATTTTGATGGTGGGAGATGGTGGTGTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440205.5 |
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| CDS GCA 90 bp | AGTAGATGTGGGGAACCTTGTCCCTTAGGGTATGGCATGAGTTTGTaGATGTGTTCTGCTCAGGGTTCCCTTTTATCGTGGAGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SRCGEPCPLGYGMSL*MCSAQGSLLSWSCW Trigger: CCAGCAGCTCCACGATAAAAGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGACAAGGTTCCCCACATCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000440205.5 ENST00000659435.1 ENST00000659748.1 ENST00000662734.1 ENST00000665160.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS GCA 90 bp | AGGGGCCGAGAGGAAGAGATGCAAAGTACCAAAAGCATCTGCCACTaGTCAGCGTTGAAAGTGGCCATACAAGTTCACATGGTGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RGREEEMQSTKSICH*SALKVAIQVHMVSL Trigger: CAAGGACACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGTACTTTGCATCTCTTCCTCTCGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS GCA 90 bp | TCAGTAAGGGGCCGAGAGGAAGAGATGCAAAGTACCAAAAGCATCTaGCACTGCTCAGCGTTGAAAGTGGCCATACAAGTTCACATGGTG | + |
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Preference number: 5 (lower is better) Translates to: SVRGREEEMQSTKSI*HCSALKVAIQVHMV Trigger: CACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGTACTTTGCATCTCTTCCTCTCGGCCCCTTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS GCA 90 bp | GTTTGTGCATGTGTTCTGCTCAGGGTTCCCAAAAGCATCTGCCACTaGTCAGCGTTGAAAGTGGCCATACAAGTTCACATGGTGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VCACVLLRVPKSICH*SALKVAIQVHMVSL Trigger: CAAGGACACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGGAACCCTGAGCAGAACACATGCACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS TCA 90 bp | AAATTACAGCAAGTGGCATCTGTCCTGTTAACATCCCTCTCCCCATaGGTCATTCAGGTGTTCATCACACCCACAGACCCTCCACTCACA | + |
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Preference number: 5 (lower is better) Translates to: KLQQVASVLLTSLSP*VIQVFITPTDPPLT Trigger: TGTGAGTGGAGGGTCTGTGGGTGTGATGAACACCTGAATGACTCATGGGGAGAGGGATGTTAACAGGACAGATGCCACTTGCTGTAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440205.5 |
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| CDS TCA 90 bp | GTGTTCTGCTCAGGGTTCCCAAAAGCATCTGCCACTGCTCAGCGTTaGAAGTGGCCATACAAGTTCACATGGTGTCCTTGTTTTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: VFCSGFPKASATAQR*KWPYKFTWCPCFQF Trigger: GAACTGAAAACAAGGACACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGGAACCCTGAGCAGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS GCA 90 bp | GGAACCTTGTCCCTTAGGGTATGGCATGAGTTTGTGCATGTGTTCTaGTCAGGGTTCCCTTTTATCGTGGAGCTGCTGGAGAAAAACAGT | + |
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Preference number: 5 (lower is better) Translates to: GTLSLRVWHEFVHVF*SGFPFIVELLEKNS Trigger: ACTGTTTTTCTCCAGCAGCTCCACGATAAAAGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGACAAGGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000440205.5 ENST00000659435.1 ENST00000659748.1 ENST00000662734.1 ENST00000665160.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS TCA 90 bp | AATCCCAGGAAAACAGGAGATAGCTGCCAGCAAGAGATGAGTCTCTaGACTCTGAGAGATTGTCCACTGACACAGTGGCTGAAATCAGTA | + |
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Preference number: 5 (lower is better) Translates to: NPRKTGDSCQQEMSL*TLRDCPLTQWLKSV Trigger: TACTGATTTCAGCCACTGTGTCAGTGGACAATCTCTCAGAGTTCAGAGACTCATCTCTTGCTGGCAGCTATCTCCTGTTTTCCTGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS GCA 90 bp | GGAACCTTGTCCCTTAGGGTATGGCATGAGTTTGTGCATGTGTTCTaGTCAGGGTTCCCTTTGAGGGTGTTTTCTTCTTTATTCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: GTLSLRVWHEFVHVF*SGFPLRVFSSLFIS Trigger: GGAGATGAATAAAGAAGAAAACACCCTCAAAGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGACAAGGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441013.5 ENST00000653079.1 ENST00000662610.1 |
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| CDS TCA 90 bp | GAAAACTCTGGTGTCCCTGCCTCCAGTCTTGGTCACTTCCAAATCTaGTCTGCACATGGCCTCCAAAGTGATATTTATTTGTTACCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ENSGVPASSLGHFQI*SAHGLQSDIYLLPV Trigger: CACTGGTAACAAATAAATATCACTTTGGAGGCCATGTGCAGATCAGATTTGGAAGTGACCAAGACTGGAGGCAGGGACACCAGAGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000439840.2 ENST00000652840.1 ENST00000653079.1 ENST00000655536.1 ENST00000659435.1 ENST00000659748.1 ENST00000662610.1 ENST00000662734.1 ENST00000662827.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS TCA 90 bp | TTTTCCAGGCCTCATCTCATCTCTCAGTTCCAAAGAGCTAATCATTaGGCATCCCAAAGATTTCCAAGTAGATGTGGGGAACCTTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: FSRPHLISQFQRANH*ASQRFPSRCGEPCP Trigger: GGGACAAGGTTCCCCACATCTACTTGGAAATCTTTGGGATGCTCAATGATTAGCTCTTTGGAACTGAGAGATGAGATGAGGCCTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS TCA 90 bp | CGATCTATCTTTCCTCCATGCAGGGGGCTTTCCAAACACATCATATaGAAATTACAGCAAGTGGCATCTGTCCTGTTAACATCCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RSIFPPCRGLSKHII*KLQQVASVLLTSLS Trigger: GGAGAGGGATGTTAACAGGACAGATGCCACTTGCTGTAATTTTCATATGATGTGTTTGGAAAGCCCCCTGCATGGAGGAAAGATAGATCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000440205.5 |
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| CDS TCA 90 bp | AGGAAGAGATGCAAAGTACCAAAAGCATCTGCCACTGCTCAGCGTTaGAAGTGGCCATACAAGTTCACATGGTGTCCTTGTTTTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: RKRCKVPKASATAQR*KWPYKFTWCPCFQF Trigger: GAACTGAAAACAAGGACACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGTACTTTGCATCTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS TCA 90 bp | CTGCCAAAGACTAACAATATCCTAAATAAGGGCTGCTTCTTCCACTaGAGTCCAGAAATGAATCAGAGCAACTGTCCATTGAGCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: LPKTNNILNKGCFFH*SPEMNQSNCPLSIP Trigger: TGGGATGCTCAATGGACAGTTGCTCTGATTCATTTCTGGACTTCAGTGGAAGAAGCAGCCCTTATTTAGGATATTGTTAGTCTTTGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652840.1 ENST00000653079.1 ENST00000659748.1 ENST00000662734.1 |
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| CDS GCA 90 bp | CTACATCCAACAGAAGCTTTCGGAGCCATCACATCACCCTTCCATTaGTTTGTATTCCCTCTGCCAAAGACTAACAATATCCTAAATAAG | + |
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Preference number: 5 (lower is better) Translates to: LHPTEAFGAITSPFH*FVFPLPKTNNILNK Trigger: CTTATTTAGGATATTGTTAGTCTTTGGCAGAGGGAATACAAAGCAATGGAAGGGTGATGTGATGGCTCCGAAAGCTTCTGTTGGATGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439840.2 ENST00000652840.1 ENST00000653079.1 ENST00000659593.1 ENST00000659748.1 ENST00000662287.1 ENST00000662734.1 ENST00000662827.1 ENST00000667265.1 ENST00000668944.1 ENST00000670098.1 |
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| CDS GCA 72 bp | GCAGGGTGCGAACCATCCAACTCCAAGCAAAGCCTGTaGTGCCGCAACTCTGCCTCACGGACTCAAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: AGCEPSNSKQSL*CRNSASRTQRL Trigger: CAGTCTTTGAGTCCGTGAGGCAGAGTTGCGGCAGCACAGGCTTTGCTTGGAGTTGGATGGTTCGCACCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000657301.1 ENST00000659593.1 ENST00000662287.1 ENST00000664370.1 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS GCA 72 bp | GGGTGCGAACCATCCAACTCCAAGCAAAGCCTGTGCTaGCGCAACTCTGCCTCACGGACTCAAAGACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GCEPSNSKQSLC*RNSASRTQRLS Trigger: TGACAGTCTTTGAGTCCGTGAGGCAGAGTTGCGGCAGCACAGGCTTTGCTTGGAGTTGGATGGTTCGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000657301.1 ENST00000659593.1 ENST00000662287.1 ENST00000664370.1 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS GCA 72 bp | ATCCAACTCCAAGCAAAGCCTGTGCTGCCGCAACTCTaGCTCACGGACTCAAAGACTGTCACTGGTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: IQLQAKPVLPQL*LTDSKTVTGGH Trigger: GTGACCACCAGTGACAGTCTTTGAGTCCGTGAGGCAGAGTTGCGGCAGCACAGGCTTTGCTTGGAGTTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000657301.1 ENST00000659593.1 ENST00000662287.1 ENST00000664370.1 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS CCA 72 bp | AGGGAATTCTTCAGCCAGAGTCTCTTTAGCCAGGTGTaGCGCGTGGCTGAGCTCTGGTCAATGGAATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: REFFSQSLFSQV*RVAELWSMECG Trigger: GCCACATTCCATTGACCAGAGCTCAGCCACGCGCCACACCTGGCTAAAGAGACTCTGGCTGAAGAATTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000441013.5 ENST00000652840.1 ENST00000653079.1 ENST00000657301.1 ENST00000659435.1 ENST00000659593.1 ENST00000659748.1 ENST00000662287.1 ENST00000662610.1 ENST00000662734.1 ENST00000662827.1 ENST00000664370.1 ENST00000665160.1 ENST00000665829.1 ENST00000667265.1 ENST00000668944.1 ENST00000669436.1 ENST00000670098.1 ENST00000671034.1 |
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| CDS CCA 72 bp | ATGAATCAGAGCAACTGTCCTTCATCCCTGAGGTGTTaGCAGGGAGGCTGGACTTCCAGCCTCACTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: MNQSNCPSSLRC*QGGWTSSLTPQ Trigger: TTGAGGAGTGAGGCTGGAAGTCCAGCCTCCCTGCCAACACCTCAGGGATGAAGGACAGTTGCTCTGATTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668944.1 |
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| CDS TCA 72 bp | CTCATCTCTCAGTTCCAAAGAGCTAATCTTCATCCCTaGGGTGTTGGCAGGGAGGCTGGACTTCCAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LISQFQRANLHP*GVGREAGLPAS Trigger: TGAGGCTGGAAGTCCAGCCTCCCTGCCAACACCTCAGGGATGAAGATTAGCTCTTTGGAACTGAGAGATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657301.1 ENST00000659593.1 |
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| CDS CAA 90 bp | CCAAGTAGATGTGGGGAACCTTGTCCCTTAGGGTATGGCATGAGTTaGTGCATGTGTTCTGCTCAGGGTTCCCTTTTATCGTGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSRCGEPCPLGYGMS*CMCSAQGSLLSWSC Trigger: GCAGCTCCACGATAAAAGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGACAAGGTTCCCCACATCTACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000440205.5 ENST00000659435.1 ENST00000659748.1 ENST00000662734.1 ENST00000665160.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS CAA 90 bp | CCAAGTAGATGTGGGGAACCTTGTCCCTTAGGGTATGGCATGAGTTaGTGCATGTGTTCTGCTCAGGGTTCCCAAAAGCATCTGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: PSRCGEPCPLGYGMS*CMCSAQGSQKHLPL Trigger: CAGTGGCAGATGCTTTTGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGACAAGGTTCCCCACATCTACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS GCA 72 bp | TCCCTTAGGGTATGGCATGAGTTTGTGCATGTGTTCTaGTCAGGGTTCCCTTTTATCGTGGAGCTGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SLRVWHEFVHVF*SGFPFIVELLE Trigger: CTCCAGCAGCTCCACGATAAAAGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000440205.5 ENST00000659435.1 ENST00000659748.1 ENST00000662734.1 ENST00000665160.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS GCA 72 bp | GGGGAACCTTGTCCCTTAGGGTATGGCATGAGTTTGTaGATGTGTTCTGCTCAGGGTTCCCAAAAGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: GEPCPLGYGMSL*MCSAQGSQKHL Trigger: CAGATGCTTTTGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGACAAGGTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS CCA 72 bp | TTAGCCAGGTGTGGCGCGTGGCTGAGCTCTGGTCAATaGAATGTGGCCTTGGTCTTTATTGACTGTGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: LARCGAWLSSGQ*NVALVFIDCGY Trigger: ATAACCACAGTCAATAAAGACCAAGGCCACATTCCATTGACCAGAGCTCAGCCACGCGCCACACCTGGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000441013.5 ENST00000652840.1 ENST00000653079.1 ENST00000657301.1 ENST00000659435.1 ENST00000659593.1 ENST00000659748.1 ENST00000662287.1 ENST00000662610.1 ENST00000662734.1 ENST00000662827.1 ENST00000664370.1 ENST00000665160.1 ENST00000665829.1 ENST00000667265.1 ENST00000668944.1 ENST00000669436.1 ENST00000670098.1 ENST00000671034.1 |
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| CDS CAA 72 bp | CTCAGGGTTCCCAAAAGCATCTGCCACTGCTCAGCGTaGAAAGTGGCCATACAAGTTCACATGGTGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRVPKSICHCSA*KVAIQVHMVSL Trigger: CAAGGACACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGGAACCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS TCA 72 bp | CACCATCTCCCACCATCAAAATTATTCGTACCAGTGTaGCTAGAGGCCTGCTGGATTCTCCCCTCATCCACT | + |
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Preference number: 6 (lower is better) Translates to: HHLPPSKLFVPV*LEACWILPSST Trigger: AGTGGATGAGGGGAGAATCCAGCAGGCCTCTAGTCACACTGGTACGAATAATTTTGATGGTGGGAGATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440205.5 |
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| CDS TCA 72 bp | GCAGTATTCGGAATAGAGGAGCGGCCTCCAGTACAATaGCTAGTTAGAGGTTCTTTCGGGGATTCTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: AVFGIEERPPVQ*LVRGSFGDSQG Trigger: ACCCTGAGAATCCCCGAAAGAACCTCTAACTAGTCATTGTACTGGAGGCCGCTCCTCTATTCCGAATACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668015.1 |
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| CDS TCA 72 bp | TCAGGGTTCCCAAAAGCATCTGCCACTGCTCAGCGTTaGAAGTGGCCATACAAGTTCACATGGTGTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SGFPKASATAQR*KWPYKFTWCPC Trigger: ACAAGGACACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGGAACCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS GCA 72 bp | GGCCGAGAGGAAGAGATGCAAAGTACCAAAAGCATCTaGCACTGCTCAGCGTTGAAAGTGGCCATACAAGTT | + |
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Preference number: 6 (lower is better) Translates to: GREEEMQSTKSI*HCSALKVAIQV Trigger: AACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGTACTTTGCATCTCTTCCTCTCGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS GCA 72 bp | TGTGTTCTGCTCAGGGTTCCCAAAAGCATCTGCCACTaGTCAGCGTTGAAAGTGGCCATACAAGTTCACATG | + |
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Preference number: 6 (lower is better) Translates to: CVLLRVPKSICH*SALKVAIQVHM Trigger: CATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGGAACCCTGAGCAGAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS GCA 72 bp | TGTGCATGTGTTCTGCTCAGGGTTCCCAAAAGCATCTaGCACTGCTCAGCGTTGAAAGTGGCCATACAAGTT | + |
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Preference number: 6 (lower is better) Translates to: CACVLLRVPKSI*HCSALKVAIQV Trigger: AACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGGAACCCTGAGCAGAACACATGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS CAA 72 bp | TGTGGGGAACCTTGTCCCTTAGGGTATGGCATGAGTTaGTGCATGTGTTCTGCTCAGGGTTCCCTTTTATCG | + |
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Preference number: 6 (lower is better) Translates to: CGEPCPLGYGMS*CMCSAQGSLLS Trigger: CGATAAAAGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGACAAGGTTCCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000440205.5 ENST00000659435.1 ENST00000659748.1 ENST00000662734.1 ENST00000665160.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS CAA 72 bp | GGCGCGTGGCTGAGCTCTGGTCAATGGAATGTGGCCTaGGTCTTTATTGACTGTGGTTATCGTGTTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: GAWLSSGQWNVA*VFIDCGYRVSI Trigger: AATGGAAACACGATAACCACAGTCAATAAAGACCAAGGCCACATTCCATTGACCAGAGCTCAGCCACGCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000441013.5 ENST00000652840.1 ENST00000653079.1 ENST00000657301.1 ENST00000659435.1 ENST00000659593.1 ENST00000659748.1 ENST00000662287.1 ENST00000662610.1 ENST00000662734.1 ENST00000662827.1 ENST00000664370.1 ENST00000665160.1 ENST00000665829.1 ENST00000667265.1 ENST00000668944.1 ENST00000669436.1 ENST00000670098.1 ENST00000671034.1 |
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| CDS CAA 72 bp | TGTGGGGAACCTTGTCCCTTAGGGTATGGCATGAGTTaGTGCATGTGTTCTGCTCAGGGTTCCCAAAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: CGEPCPLGYGMS*CMCSAQGSQKH Trigger: ATGCTTTTGGGAACCCTGAGCAGAACACATGCACAAACTCATGCCATACCCTAAGGGACAAGGTTCCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS TCA 72 bp | AAAACAGGAGATAGCTGCCAGCAAGAGATGAGTCTCTaGACTCTGAGAGATTGTCCACTGACACAGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KTGDSCQQEMSL*TLRDCPLTQWL Trigger: CAGCCACTGTGTCAGTGGACAATCTCTCAGAGTTCAGAGACTCATCTCTTGCTGGCAGCTATCTCCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS TCA 72 bp | TTCCACCTCTCCCACTTCTGGCCAAAGACAAGAGGCTaGAAATTTTCTCCAACAGCTTCCCATTGTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: FHLSHFWPKTRG*KFSPTASHCPW Trigger: CCAAGGACAATGGGAAGCTGTTGGAGAAAATTTTCAGCCTCTTGTCTTTGGCCAGAAGTGGGAGAGGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS CAA 72 bp | CTGTCACTGGTGGTCACAGAATTAGTCAACAGGAACTaGACTGTACTGGGGGAAGTTTTCCAGGCCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LSLVVTELVNRN*TVLGEVFQASS Trigger: AGATGAGGCCTGGAAAACTTCCCCCAGTACAGTCAAGTTCCTGTTGACTAATTCTGTGACCACCAGTGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000657301.1 ENST00000659593.1 ENST00000662287.1 ENST00000664370.1 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS CAA 90 bp | TGTGTTCTGCTCAGGGTTCCCAAAAGCATCTGCCACTGCTCAGCGTaGAAAGTGGCCATACAAGTTCACATGGTGTCCTTGTTTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: CVLLRVPKSICHCSA*KVAIQVHMVSLFSV Trigger: AACTGAAAACAAGGACACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGGAACCCTGAGCAGAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670098.1 |
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| CDS CAA 90 bp | ACTCAAAGACTGTCACTGGTGGTCACAGAATTAGTCAACAGGAACTaGACTGTACTGGGGGAAGTTTTCCAGGCCTCATCTCATCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TQRLSLVVTELVNRN*TVLGEVFQASSHLS Trigger: TGAGAGATGAGATGAGGCCTGGAAAACTTCCCCCAGTACAGTCAAGTTCCTGTTGACTAATTCTGTGACCACCAGTGACAGTCTTTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000439840.2 ENST00000440205.5 ENST00000657301.1 ENST00000659593.1 ENST00000662287.1 ENST00000664370.1 ENST00000668015.1 ENST00000669436.1 ENST00000670098.1 |
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| CDS TCA 72 bp | GGTGTCCCTGCCTCCAGTCTTGGTCACTTCCAAATCTaGTCTGCACATGGCCTCCAAAGTGATATTTATTTG | + |
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Preference number: 6 (lower is better) Translates to: GVPASSLGHFQI*SAHGLQSDIYL Trigger: CAAATAAATATCACTTTGGAGGCCATGTGCAGATCAGATTTGGAAGTGACCAAGACTGGAGGCAGGGACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000439840.2 ENST00000652840.1 ENST00000653079.1 ENST00000655536.1 ENST00000659435.1 ENST00000659748.1 ENST00000662610.1 ENST00000662734.1 ENST00000662827.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS GCA 72 bp | CATGGACCAGTTTTTAACAGAAAACTCTGGTGTCCCTaGCTCCAGTCTTGGTCACTTCCAAATCTGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: HGPVFNRKLWCP*LQSWSLPNLIC Trigger: GCAGATCAGATTTGGAAGTGACCAAGACTGGAGGCAGGGACACCAGAGTTTTCTGTTAAAAACTGGTCCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000441013.5 ENST00000652840.1 ENST00000653079.1 ENST00000655536.1 ENST00000659435.1 ENST00000659748.1 ENST00000662610.1 ENST00000662734.1 ENST00000662827.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS GCA 72 bp | GAGGAAGAGATGCAAAGTACCAAAAGCATCTGCCACTaGTCAGCGTTGAAAGTGGCCATACAAGTTCACATG | + |
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Preference number: 6 (lower is better) Translates to: EEEMQSTKSICH*SALKVAIQVHM Trigger: CATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGTACTTTGCATCTCTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS CAA 90 bp | GAGGAAGAGATGCAAAGTACCAAAAGCATCTGCCACTGCTCAGCGTaGAAAGTGGCCATACAAGTTCACATGGTGTCCTTGTTTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: EEEMQSTKSICHCSA*KVAIQVHMVSLFSV Trigger: AACTGAAAACAAGGACACCATGTGAACTTGTATGGCCACTTTCAACGCTGAGCAGTGGCAGATGCTTTTGGTACTTTGCATCTCTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655536.1 |
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| CDS CCA 72 bp | TTGTGCATGTGTTCTGCTCAGGGTTCCCTTTTATCGTaGAGCTGCTGGAGAAAAACAGTAGAATTCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LCMCSAQGSLLS*SCWRKTVEFSC Trigger: ACAGGAGAATTCTACTGTTTTTCTCCAGCAGCTCCACGATAAAAGGGAACCCTGAGCAGAACACATGCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000332587.8 ENST00000439840.2 ENST00000440205.5 ENST00000659435.1 ENST00000659748.1 ENST00000662734.1 ENST00000665160.1 ENST00000665829.1 ENST00000668015.1 ENST00000669436.1 |
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| CDS CAA 72 bp | AAACTTAGAACAAGCTCAGTGGTAAAAAGGACATCCTaGTCTCATAGTGACAGTGGAGCCACTCCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: KLRTSSVVKRTS*SHSDSGATPAS Trigger: AGAGGCAGGAGTGGCTCCACTGTCACTATGAGACAAGGATGTCCTTTTTACCACTGAGCTTGTTCTAAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671034.1 |
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| CDS TCA 72 bp | GTCGTCATTATTAGCCTCATGTTACAGCAGAAGCTGTaGGTTGCTGCCAAAGTTGCTTACTATCAACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VVIISLMLQQKL*VAAKVAYYQPL Trigger: CAGAGGTTGATAGTAAGCAACTTTGGCAGCAACTCACAGCTTCTGCTGTAACATGAGGCTAATAATGACGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653079.1 ENST00000664370.1 |
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| CDS GCA 72 bp | ACAGAAGCTTTCGGAGCCATCACATCACCCTTCCATTaGTTTGTATTCCCTCTGCCAAAGACTAACAATATC | + |
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Preference number: 6 (lower is better) Translates to: TEAFGAITSPFH*FVFPLPKTNNI Trigger: GATATTGTTAGTCTTTGGCAGAGGGAATACAAAGCAATGGAAGGGTGATGTGATGGCTCCGAAAGCTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000439840.2 ENST00000652840.1 ENST00000653079.1 ENST00000659593.1 ENST00000659748.1 ENST00000662287.1 ENST00000662734.1 ENST00000662827.1 ENST00000667265.1 ENST00000668944.1 ENST00000670098.1 |
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| CDS GCA 72 bp | CATGTTACAGCAGAAGCTGTGAGTTGCTGCCAAAGTTaGTTACTATCAACCTCTGAAGAGATGAAACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HVTAEAVSCCQS*LLSTSEEMKQR Trigger: TCTCTGTTTCATCTCTTCAGAGGTTGATAGTAAGCAACTTTGGCAGCAACTCACAGCTTCTGCTGTAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653079.1 ENST00000664370.1 |
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| CDS CCA 72 bp | CACCACCCTCAAGAAGTGTGTAATTCACTTTTATCGTaGAGCTGCTGGAGAAAAACAGTAGAATTCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HHPQEVCNSLLS*SCWRKTVEFSC Trigger: ACAGGAGAATTCTACTGTTTTTCTCCAGCAGCTCCACGATAAAAGTGAATTACACACTTCTTGAGGGTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655536.1 ENST00000670098.1 |
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| CDS TCA 72 bp | TCCTTGGTAAAGTTCCAAAATGGCTCTGGATCCTACTaGCATCTGTTACTAAGGATAATGCATGAAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SLVKFQNGSGSY*HLLLRIMHEGD Trigger: ATCTCCTTCATGCATTATCCTTAGTAACAGATGTCAGTAGGATCCAGAGCCATTTTGGAACTTTACCAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332587.8 ENST00000441013.5 |
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| CDS TCA 72 bp | GCTGCCAAAGTTGCTTACTATCAACCTCTGAAGAGATaGAACAGAGAGTCATACAAGATCTGTTTAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: AAKVAYYQPLKR*NRESYKICLNP Trigger: TGGATTTAAACAGATCTTGTATGACTCTCTGTTTCATCTCTTCAGAGGTTGATAGTAAGCAACTTTGGCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653079.1 ENST00000664370.1 |
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| CDS CCA 72 bp | TCATCCTTAATCCTTGGTAAAGTTCCAAAATGGCTCTaGATCCTACTGACATCTGTTACTAAGGATAATGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLILGKVPKWL*ILLTSVTKDNA Trigger: TGCATTATCCTTAGTAACAGATGTCAGTAGGATCCAGAGCCATTTTGGAACTTTACCAAGGATTAAGGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332587.8 ENST00000441013.5 |
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