Pregenerated sensors for LINC00092 (Homo sapiens)
Ensembl gene IDs: ENSG00000225194Ensembl transcript IDs: ENST00000412122.3, ENST00000580908.2, ENST00000583864.2, ENST00000648648.1, ENST00000649879.1, ENST00000650007.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGCTCGCAGCGCCGCCGCGGCGAACCCAGCTAGGGGGCACCGCCTaGGCCGGGCACAGGGAGGCCGTTCGGCTTTCCCCCTCGCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GLAAPPRRTQLGGTA*AGHREAVRLSPSRP Trigger: TGGGCGCGAGGGGGAAAGCCGAACGGCCTCCCTGTGCCCGGCGCAGGCGGTGCCCCCTAGCTGGGTTCGCCGCGGCGGCGCTGCGAGCCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CCA 90 bp | CGCGGGCCAAGTGTCGGGCTGCGTCCGGGCAGAGGCGGCTTCGCCTaGTGTCAGCGCGTTTCCGAAGGGCACCCGCGGCGGGGCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: RGPSVGLRPGRGGFA*CQRVSEGHPRRGPQ Trigger: TTGTGGGCCCCGCCGCGGGTGCCCTTCGGAAACGCGCTGACACCAGGCGAAGCCGCCTCTGCCCGGACGCAGCCCGACACTTGGCCCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CCA 90 bp | GGCCCAGGCACCTGGAGCCGGGAGGGTCCGCTCCCTTCCCCGCCCTaGATGGCGGCCTATGGGAAAGCAGTCTCCACTGGATCCCGCGCG | + |
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Preference number: 5 (lower is better) Translates to: GPGTWSREGPLPSPP*MAAYGKAVSTGSRA Trigger: CGCGCGGGATCCAGTGGAGACTGCTTTCCCATAGGCCGCCATCCAGGGCGGGGAAGGGAGCGGACCCTCCCGGCTCCAGGTGCCTGGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS GCA 90 bp | TTACTCTCAGGCGTCCCGGGGAACCCCGCGGGCCAAGTGTCGGGCTaGGTCCGGGCAGAGGCGGCTTCGCCTGGTGTCAGCGCGTTTCCG | + |
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Preference number: 5 (lower is better) Translates to: LLSGVPGNPAGQVSG*VRAEAASPGVSAFP Trigger: CGGAAACGCGCTGACACCAGGCGAAGCCGCCTCTGCCCGGACGCAGCCCGACACTTGGCCCGCGGGGTTCCCCGGGACGCCTGAGAGTAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CCA 90 bp | CCCTTCCCCGCCCTGGATGGCGGCCTATGGGAAAGCAGTCTCCACTaGATCCCGCGCGCGTCGCGCCGAGGTCGTGGGAAACCGAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PFPALDGGLWESSLH*IPRASRRGRGKPRA Trigger: CGCCCTCGGTTTCCCACGACCTCGGCGCGACGCGCGCGGGATCCAGTGGAGACTGCTTTCCCATAGGCCGCCATCCAGGGCGGGGAAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS CCA 90 bp | CAGGCACCTGGAGCCGGGAGGGTCCGCTCCCTTCCCCGCCCTGGATaGCGGCCTATGGGAAAGCAGTCTCCACTGGATCCCGCGCGCGTC | + |
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Preference number: 5 (lower is better) Translates to: QAPGAGRVRSLPRPG*RPMGKQSPLDPARV Trigger: GACGCGCGCGGGATCCAGTGGAGACTGCTTTCCCATAGGCCGCCATCCAGGGCGGGGAAGGGAGCGGACCCTCCCGGCTCCAGGTGCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS TCA 90 bp | CGCCGCCTTGCCGAGACCCTCCAAGCCGACTCCTCAGCCTTCTACTaGATCTCCTCCAGGCTAGCTCCCAGGGGCGCCTGTCCAGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: RRLAETLQADSSAFY*ISSRLAPRGACPGP Trigger: CGGGCCTGGACAGGCGCCCCTGGGAGCTAGCCTGGAGGAGATTCAGTAGAAGGCTGAGGAGTCGGCTTGGAGGGTCTCGGCAAGGCGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000580908.2 ENST00000583864.2 ENST00000648648.1 |
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| CDS CCA 90 bp | AGCGCGTTTCCGAAGGGCACCCGCGGCGGGGCCCACAACTCGAGCTaGGAGCCGCCCCAAGCAACCCGTTCCTCCGAATCAGGCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SAFPKGTRGGAHNSS*EPPQATRSSESGCF Trigger: AAAGCAGCCTGATTCGGAGGAACGGGTTGCTTGGGGCGGCTCCCAGCTCGAGTTGTGGGCCCCGCCGCGGGTGCCCTTCGGAAACGCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CCA 90 bp | CCAGTCCTCATGCAGAGCCCCGTCCCCGCACCGAGGCAGCAGAGCTaGGAGCGCGATGCAGTTCTCTGCGAGAGCCTAGGTCTGACTCTA | + |
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Preference number: 5 (lower is better) Translates to: PVLMQSPVPAPRQQS*ERDAVLCESLGLTL Trigger: TAGAGTCAGACCTAGGCTCTCGCAGAGAACTGCATCGCGCTCCCAGCTCTGCTGCCTCGGTGCGGGGACGGGGCTCTGCATGAGGACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580908.2 |
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| CDS GCA 90 bp | CTGTTTGGTGCGGAGGTTCCTGGTTTGGGTTGGCCAGGCGTAGAGTaGTTCCGACAATTCACCCACCCTCCAAGACGCGCGGGCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LFGAEVPGLGWPGVE*FRQFTHPPRRAGRG Trigger: TCCCCGGCCCGCGCGTCTTGGAGGGTGGGTGAATTGTCGGAAGCACTCTACGCCTGGCCAACCCAAACCAGGAACCTCCGCACCAAACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CCA 90 bp | AACCCCAGAGCAGCAGCAACGTGGGCTGTTTGGTGCGGAGGTTCCTaGTTTGGGTTGGCCAGGCGTAGAGTGCTTCCGACAATTCACCCA | + |
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Preference number: 5 (lower is better) Translates to: NPRAAATWAVWCGGS*FGLARRRVLPTIHP Trigger: TGGGTGAATTGTCGGAAGCACTCTACGCCTGGCCAACCCAAACCAGGAACCTCCGCACCAAACAGCCCACGTTGCTGCTGCTCTGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS GCA 90 bp | CTAAGGGACAAGGCCCACCGAGGAAGGCAGCTGCAGATGATGGAATaGCCTCCCAATGGCGGGAACAAGCAAGGCTTCCGCAGCTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LRDKAHRGRQLQMME*PPNGGNKQGFRSSK Trigger: TTTTGAGCTGCGGAAGCCTTGCTTGTTCCCGCCATTGGGAGGGCATTCCATCATCTGCAGCTGCCTTCCTCGGTGGGCCTTGTCCCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS GCA 90 bp | CTCTGTCACTCTGGTGGGCTTCATTCTCAGGCTGCATCATGGGAGTaGAGTAGCAGCAGAAGGTCCAGCTCGCCTGGTGCTTCCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: LCHSGGLHSQAASWE*SSSRRSSSPGASSV Trigger: GACACTGGAAGCACCAGGCGAGCTGGACCTTCTGCTGCTACTGCACTCCCATGATGCAGCCTGAGAATGAAGCCCACCAGAGTGACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS GCA 90 bp | AGGGACACCACCCACACCCTGTGTCACCAGCTCACCACTCAGGTCTaGTCTCTGTCACTCTGGTGGGCTTCATTCTCAGGCTGCATCATG | + |
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Preference number: 5 (lower is better) Translates to: RDTTHTLCHQLTTQV*SLSLWWASFSGCIM Trigger: CATGATGCAGCCTGAGAATGAAGCCCACCAGAGTGACAGAGAGCAGACCTGAGTGGTGAGCTGGTGACACAGGGTGTGGGTGGTGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CCA 90 bp | GGCCCACCGAGGAAGGCAGCTGCAGATGATGGAATGCCCTCCCAATaGCGGGAACAAGCAAGGCTTCCGCAGCTCAAAAGGAGAAACATG | + |
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Preference number: 5 (lower is better) Translates to: GPPRKAAADDGMPSQ*REQARLPQLKRRNM Trigger: CATGTTTCTCCTTTTGAGCTGCGGAAGCCTTGCTTGTTCCCGCCATTGGGAGGGCATTCCATCATCTGCAGCTGCCTTCCTCGGTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS CCA 90 bp | TGGGGTGGACAAGCAGGTCTCAAGAAGCTTAGAATGTCCCCTAGGTaGACGCTAAGGGACAAGGCCCACCGAGGAAGGCAGCTGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: WGGQAGLKKLRMSPR*TLRDKAHRGRQLQM Trigger: CATCTGCAGCTGCCTTCCTCGGTGGGCCTTGTCCCTTAGCGTCCACCTAGGGGACATTCTAAGCTTCTTGAGACCTGCTTGTCCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS CCA 90 bp | TCTGCTCTCTGTCACTCTGGTGGGCTTCATTCTCAGGCTGCATCATaGGAGTGCAGTAGCAGCAGAAGGTCCAGCTCGCCTGGTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SALCHSGGLHSQAAS*ECSSSRRSSSPGAS Trigger: GGAAGCACCAGGCGAGCTGGACCTTCTGCTGCTACTGCACTCCCATGATGCAGCCTGAGAATGAAGCCCACCAGAGTGACAGAGAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS TCA 90 bp | TCAGGGGGCCAGGCCTTCAGCAGGTGGATAAGATGGGAGGAGTTCTaGAATACACACCCGGGATGCTCCAGAGGCCAAATCATAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SGGQAFSRWIRWEEF*NTHPGCSRGQIIGQ Trigger: CTGCCCTATGATTTGGCCTCTGGAGCATCCCGGGTGTGTATTTCAGAACTCCTCCCATCTTATCCACCTGCTGAAGGCCTGGCCCCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS GCA 90 bp | TCTTTCTCAGCATTCTTCGCAGCTTCATCTCCATCCGCGCCGCCTTaGCGAGACCCTCCAAGCCGACTCCTCAGCCTTCTACTGAATCTC | + |
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Preference number: 5 (lower is better) Translates to: SFSAFFAASSPSAPP*RDPPSRLLSLLLNL Trigger: GAGATTCAGTAGAAGGCTGAGGAGTCGGCTTGGAGGGTCTCGGCAAGGCGGCGCGGATGGAGATGAAGCTGCGAAGAATGCTGAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580908.2 ENST00000583864.2 ENST00000648648.1 |
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| CDS TCA 90 bp | ATCCATAGCAAACCACTCTCTTCTTGGATAGTTGGCTCCCAGACTTaGAGGCTGTGCTCCTTGCTGTCCTCGGACCTCTCCAGCGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: IHSKPLSSWIVGSQT*RLCSLLSSDLSSGL Trigger: GAGACCGCTGGAGAGGTCCGAGGACAGCAAGGAGCACAGCCTTCAAGTCTGGGAGCCAACTATCCAAGAAGAGAGTGGTTTGCTATGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS TCA 90 bp | GGTCGATATTGGAGGATTGAGTGGCAAGCCAAGATTCAGATATGGTaGCTGATAGAAGCAGTGAAGGTCTCTTCTCCCGGGGCGCCGACG | + |
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Preference number: 5 (lower is better) Translates to: GRYWRIEWQAKIQIW*LIEAVKVSSPGAPT Trigger: CGTCGGCGCCCCGGGAGAAGAGACCTTCACTGCTTCTATCAGTCACCATATCTGAATCTTGGCTTGCCACTCAATCCTCCAATATCGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580908.2 |
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| CDS CCA 90 bp | TGCCCTCAAAGACCCCTTAGGGCACAGCCATATGCTGAGACATGTTaGGGTGGACAAGCAGGTCTCAAGAAGCTTAGAATGTCCCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: CPQRPLRAQPYAETC*GGQAGLKKLRMSPR Trigger: CCTAGGGGACATTCTAAGCTTCTTGAGACCTGCTTGTCCACCCCAACATGTCTCAGCATATGGCTGTGCCCTAAGGGGTCTTTGAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS GCA 90 bp | AATGGCGGGAACAAGCAAGGCTTCCGCAGCTCAAAAGGAGAAACATaGTTTGCGCTGGAGTCCTCAGAAAAGGCCACTTCCAAACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: NGGNKQGFRSSKGET*FALESSEKATSKLW Trigger: CCACAGTTTGGAAGTGGCCTTTTCTGAGGACTCCAGCGCAAAGCATGTTTCTCCTTTTGAGCTGCGGAAGCCTTGCTTGTTCCCGCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS GCA 90 bp | AGAAATCAGTGCTATTTCCGAATGGAGCCCGGAGTTTCTCAGCACTaGGCTCCTCCAGTGCCAGAAGCACCCTACTTCTCTTCCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RNQCYFRMEPGVSQH*APPVPEAPYFSSSV Trigger: AACTGAGGAAGAGAAGTAGGGTGCTTCTGGCACTGGAGGAGCGCAGTGCTGAGAAACTCCGGGCTCCATTCGGAAATAGCACTGATTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS GCA 90 bp | ACTCTTCCACTATTCAACCCAGGGGCAAGCACTGTCATCCCTCACTaGTACCAGCTTCTGGTCAGTCTTTCTGGCCACACGTATGTAGAC | + |
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Preference number: 5 (lower is better) Translates to: TLPLFNPGASTVIPH*YQLLVSLSGHTYVD Trigger: GTCTACATACGTGTGGCCAGAAAGACTGACCAGAAGCTGGTAGCAGTGAGGGATGACAGTGCTTGCCCCTGGGTTGAATAGTGGAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS TCA 90 bp | TGGTCTGAGTTTCTGGAGATGACTAGGAGTAGCAGGAAGGGACACTaGGCTACACAACACATCCAAAGCCCACCACACATCAGACCCAAG | + |
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Preference number: 5 (lower is better) Translates to: WSEFLEMTRSSRKGH*ATQHIQSPPHIRPK Trigger: CTTGGGTCTGATGTGTGGTGGGCTTTGGATGTGTTGTGTAGCTCAGTGTCCCTTCCTGCTACTCCTAGTCATCTCCAGAAACTCAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CCA 90 bp | CCAGAAGCACCCTACTTCTCTTCCTCAGTTGCTTCATCAATCACATaGGGCTGGGGCAGTGAGGAGGATGTATTTGCCTCACATAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: PEAPYFSSSVASSIT*GWGSEEDVFASHRD Trigger: GTCTCTATGTGAGGCAAATACATCCTCCTCACTGCCCCAGCCCCATGTGATTGATGAAGCAACTGAGGAAGAGAAGTAGGGTGCTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CCA 90 bp | TCAATCCCAATGTATTCAAGAGAGACCTCAACTTGCTTTCCTAGATaGGACGTGGTGGCCCACGGCATCCATAGCAAACCACTCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SIPMYSRETSTCFPR*DVVAHGIHSKPLSS Trigger: AGAAGAGAGTGGTTTGCTATGGATGCCGTGGGCCACCACGTCCCATCTAGGAAAGCAAGTTGAGGTCTCTCTTGAATACATTGGGATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS TCA 90 bp | TCTTCAACTTGCAAGGAACTGTGCGCGGTGTTAAGACCATGCCTCTaGGATCACTGGAGAGACAGATGGAGAAGTGGAGGATTTGTATTT | + |
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Preference number: 5 (lower is better) Translates to: SSTCKELCAVLRPCL*DHWRDRWRSGGFVF Trigger: AAATACAAATCCTCCACTTCTCCATCTGTCTCTCCAGTGATCTCAGAGGCATGGTCTTAACACCGCGCACAGTTCCTTGCAAGTTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580908.2 ENST00000649879.1 |
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| CDS TCA 90 bp | GGTCGATATTGGAGGATTGAGTGGCAAGCCAAGATTCAGATATGGTaGCTGATAGAAGCAGTGAAGGTCTATTCCCAGTCCTCATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GRYWRIEWQAKIQIW*LIEAVKVYSQSSCR Trigger: TCTGCATGAGGACTGGGAATAGACCTTCACTGCTTCTATCAGTCACCATATCTGAATCTTGGCTTGCCACTCAATCCTCCAATATCGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649879.1 |
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| CDS TCA 90 bp | CCTCAGATAGAGAGAATCTCCTGTTGTTGGTCGATATTGGAGGATTaGGTGGCAAGCCAAGATTCAGATATGGTGACTGATAGAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: PQIERISCCWSILED*VASQDSDMVTDRSS Trigger: ACTGCTTCTATCAGTCACCATATCTGAATCTTGGCTTGCCACTCAATCCTCCAATATCGACCAACAACAGGAGATTCTCTCTATCTGAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580908.2 ENST00000649879.1 |
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| CDS TCA 90 bp | TCTATTTTTCTTAAACACGAATCACTTTCCAGAAGGGAACCGAAATaGCCACCTCTAAAAGTTGCTACTAACTATTGCTCCAGAAACCAA | + |
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Preference number: 5 (lower is better) Translates to: SIFLKHESLSRREPK*PPLKVATNYCSRNQ Trigger: TTGGTTTCTGGAGCAATAGTTAGTAGCAACTTTTAGAGGTGGTCATTTCGGTTCCCTTCTGGAAAGTGATTCGTGTTTAAGAAAAATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS GCA 72 bp | GGCGTCCCGGGGAACCCCGCGGGCCAAGTGTCGGGCTaGGTCCGGGCAGAGGCGGCTTCGCCTGGTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: GVPGNPAGQVSG*VRAEAASPGVS Trigger: GCTGACACCAGGCGAAGCCGCCTCTGCCCGGACGCAGCCCGACACTTGGCCCGCGGGGTTCCCCGGGACGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CCA 72 bp | TCTCCACTGGATCCCGCGCGCGTCGCGCCGAGGTCGTaGGAAACCGAGGGCGGGAGGGCGGGAGGGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPLDPARVAPRS*ETEGGRAGGRR Trigger: CCTCCGCCCTCCCGCCCTCCCGCCCTCGGTTTCCCACGACCTCGGCGCGACGCGCGCGGGATCCAGTGGAGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS CCA 72 bp | AGTGTCGGGCTGCGTCCGGGCAGAGGCGGCTTCGCCTaGTGTCAGCGCGTTTCCGAAGGGCACCCGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SVGLRPGRGGFA*CQRVSEGHPRR Trigger: CCGCCGCGGGTGCCCTTCGGAAACGCGCTGACACCAGGCGAAGCCGCCTCTGCCCGGACGCAGCCCGACACT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS GCA 72 bp | GAAGGTCTCTTCTCCCGGGGCGCCGACGGCCTCGGCTaGCCCCGCAGCGTTTCCCTAGCTTCCCTCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: EGLFSRGADGLG*PRSVSLASLQG Trigger: GCCTTGGAGGGAAGCTAGGGAAACGCTGCGGGGGCAGCCGAGGCCGTCGGCGCCCCGGGAGAAGAGACCTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580908.2 |
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| CDS CCA 72 bp | CCGAAGGGCACCCGCGGCGGGGCCCACAACTCGAGCTaGGAGCCGCCCCAAGCAACCCGTTCCTCCGAATCA | + |
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Preference number: 6 (lower is better) Translates to: PKGTRGGAHNSS*EPPQATRSSES Trigger: TGATTCGGAGGAACGGGTTGCTTGGGGCGGCTCCCAGCTCGAGTTGTGGGCCCCGCCGCGGGTGCCCTTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CCA 72 bp | GGAGCCGGGAGGGTCCGCTCCCTTCCCCGCCCTGGATaGCGGCCTATGGGAAAGCAGTCTCCACTGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: GAGRVRSLPRPG*RPMGKQSPLDP Trigger: GGGATCCAGTGGAGACTGCTTTCCCATAGGCCGCCATCCAGGGCGGGGAAGGGAGCGGACCCTCCCGGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS CCA 72 bp | GCCCTGGATGGCGGCCTATGGGAAAGCAGTCTCCACTaGATCCCGCGCGCGTCGCGCCGAGGTCGTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: ALDGGLWESSLH*IPRASRRGRGK Trigger: TTTCCCACGACCTCGGCGCGACGCGCGCGGGATCCAGTGGAGACTGCTTTCCCATAGGCCGCCATCCAGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS GCA 72 bp | CCTGTCCAGGCCCGGGACTTACATTCCCAGTCCTCATaGAGAGCCCCGTCCCCGCACCGAGGCAGCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PVQARDLHSQSS*RAPSPHRGSRA Trigger: AGCTCTGCTGCCTCGGTGCGGGGACGGGGCTCTGCATGAGGACTGGGAATGTAAGTCCCGGGCCTGGACAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000580908.2 ENST00000583864.2 ENST00000648648.1 |
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| CDS CCA 72 bp | ATGCAGAGCCCCGTCCCCGCACCGAGGCAGCAGAGCTaGGAGCGCGATGCAGTTCTCTGCGAGAGCCTAGGT | + |
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Preference number: 6 (lower is better) Translates to: MQSPVPAPRQQS*ERDAVLCESLG Trigger: ACCTAGGCTCTCGCAGAGAACTGCATCGCGCTCCCAGCTCTGCTGCCTCGGTGCGGGGACGGGGCTCTGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000580908.2 ENST00000583864.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS GCA 72 bp | CCGAGGCAGCAGAGCTGGGAGCGCGATGCAGTTCTCTaGGAGAGCCTAGGTCTGACTCTAACTCTGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PRQQSWERDAVL*ESLGLTLTLPW Trigger: CCAGGGCAGAGTTAGAGTCAGACCTAGGCTCTCGCAGAGAACTGCATCGCGCTCCCAGCTCTGCTGCCTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580908.2 |
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| CDS GCA 72 bp | GCATTCTTCGCAGCTTCATCTCCATCCGCGCCGCCTTaGCGAGACCCTCCAAGCCGACTCCTCAGCCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: AFFAASSPSAPP*RDPPSRLLSLL Trigger: TAGAAGGCTGAGGAGTCGGCTTGGAGGGTCTCGGCAAGGCGGCGCGGATGGAGATGAAGCTGCGAAGAATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580908.2 ENST00000583864.2 ENST00000648648.1 |
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| CDS CCA 72 bp | GCAGCAGCAACGTGGGCTGTTTGGTGCGGAGGTTCCTaGTTTGGGTTGGCCAGGCGTAGAGTGCTTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: AAATWAVWCGGS*FGLARRRVLPT Trigger: TGTCGGAAGCACTCTACGCCTGGCCAACCCAAACCAGGAACCTCCGCACCAAACAGCCCACGTTGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CAA 72 bp | CCGTTAAAACCCCAGAGCAGCAGCAACGTGGGCTGTTaGGTGCGGAGGTTCCTGGTTTGGGTTGGCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: PLKPQSSSNVGC*VRRFLVWVGQA Trigger: CGCCTGGCCAACCCAAACCAGGAACCTCCGCACCAAACAGCCCACGTTGCTGCTGCTCTGGGGTTTTAACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CAA 72 bp | AGCATTCTTCGCAGCTTCATCTCCATCCGCGCCGCCTaGCCGAGACCCTCCAAGCCGACTCCTCAGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SILRSFISIRAA*PRPSKPTPQPS Trigger: AGAAGGCTGAGGAGTCGGCTTGGAGGGTCTCGGCAAGGCGGCGCGGATGGAGATGAAGCTGCGAAGAATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580908.2 ENST00000583864.2 ENST00000648648.1 |
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| CDS CAA 72 bp | TCCTCGGACCTCTCCAGCGGTCTCTTTCTAGTTTCCTaGGTGGGCTCCGCCTCCTCCTCCTCACCTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSDLSSGLFLVS*VGSASSSSPCP Trigger: GGGACAAGGTGAGGAGGAGGAGGCGGAGCCCACCAAGGAAACTAGAAAGAGACCGCTGGAGAGGTCCGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS GCA 72 bp | CTGATAGAAGCAGTGAAGGTCTATTCCCAGTCCTCATaGAGAGCCCCGTCCCCGCACCGAGGCAGCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LIEAVKVYSQSS*RAPSPHRGSRA Trigger: AGCTCTGCTGCCTCGGTGCGGGGACGGGGCTCTGCATGAGGACTGGGAATAGACCTTCACTGCTTCTATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649879.1 |
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| CDS CAA 90 bp | TCCTTGCTGTCCTCGGACCTCTCCAGCGGTCTCTTTCTAGTTTCCTaGGTGGGCTCCGCCTCCTCCTCCTCACCTTGTCCCTTGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: SLLSSDLSSGLFLVS*VGSASSSSPCPLDF Trigger: GAAATCCAAGGGACAAGGTGAGGAGGAGGAGGCGGAGCCCACCAAGGAAACTAGAAAGAGACCGCTGGAGAGGTCCGAGGACAGCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS GCA 72 bp | TCTGGTGGGCTTCATTCTCAGGCTGCATCATGGGAGTaGAGTAGCAGCAGAAGGTCCAGCTCGCCTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SGGLHSQAASWE*SSSRRSSSPGA Trigger: AGCACCAGGCGAGCTGGACCTTCTGCTGCTACTGCACTCCCATGATGCAGCCTGAGAATGAAGCCCACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CCA 72 bp | TGGTGGGCTCCGCCTCCTCCTCCTCACCTTGTCCCTTaGATTTCCCAGGGAGCTATCCCCAATCTAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: WWAPPPPPHLVP*ISQGAIPNLGL Trigger: TAACCCTAGATTGGGGATAGCTCCCTGGGAAATCCAAGGGACAAGGTGAGGAGGAGGAGGCGGAGCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CAA 72 bp | ACGTGGGCTGTTTGGTGCGGAGGTTCCTGGTTTGGGTaGGCCAGGCGTAGAGTGCTTCCGACAATTCACCCA | + |
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Preference number: 6 (lower is better) Translates to: TWAVWCGGSWFG*ARRRVLPTIHP Trigger: TGGGTGAATTGTCGGAAGCACTCTACGCCTGGCCAACCCAAACCAGGAACCTCCGCACCAAACAGCCCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CAA 72 bp | CAGCAACGTGGGCTGTTTGGTGCGGAGGTTCCTGGTTaGGGTTGGCCAGGCGTAGAGTGCTTCCGACAATTC | + |
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Preference number: 6 (lower is better) Translates to: QQRGLFGAEVPG*GWPGVECFRQF Trigger: GAATTGTCGGAAGCACTCTACGCCTGGCCAACCCAAACCAGGAACCTCCGCACCAAACAGCCCACGTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412122.3 ENST00000583864.2 |
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| CDS CAA 90 bp | CTCTTTCTCAGCATTCTTCGCAGCTTCATCTCCATCCGCGCCGCCTaGCCGAGACCCTCCAAGCCGACTCCTCAGCCTTCTACTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: LFLSILRSFISIRAA*PRPSKPTPQPSTES Trigger: AGATTCAGTAGAAGGCTGAGGAGTCGGCTTGGAGGGTCTCGGCAAGGCGGCGCGGATGGAGATGAAGCTGCGAAGAATGCTGAGAAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580908.2 ENST00000583864.2 ENST00000648648.1 |
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| CDS TCA 72 bp | GAACCGAGGATTGCAGTAACCAGGGGCTCAGAAAGCTaGGATATCCCTCCAGTGAAAGGGGACCCGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: EPRIAVTRGSES*DIPPVKGDPGA Trigger: TGCTCCCGGGTCCCCTTTCACTGGAGGGATATCTCAGCTTTCTGAGCCCCTGGTTACTGCAATCCTCGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CCA 72 bp | CAAGCAGGTCTCAAGAAGCTTAGAATGTCCCCTAGGTaGACGCTAAGGGACAAGGCCCACCGAGGAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QAGLKKLRMSPR*TLRDKAHRGRQ Trigger: CTGCCTTCCTCGGTGGGCCTTGTCCCTTAGCGTCCACCTAGGGGACATTCTAAGCTTCTTGAGACCTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS CAA 90 bp | CTAGTTTCCTTGGTGGGCTCCGCCTCCTCCTCCTCACCTTGTCCCTaGGATTTCCCAGGGAGCTATCCCCAATCTAGGGTTAGTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: LVSLVGSASSSSPCP*DFPGSYPQSRVSLM Trigger: CATGAGACTAACCCTAGATTGGGGATAGCTCCCTGGGAAATCCAAGGGACAAGGTGAGGAGGAGGAGGCGGAGCCCACCAAGGAAACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS GCA 72 bp | CTATTCAACCCAGGGGCAAGCACTGTCATCCCTCACTaGTACCAGCTTCTGGTCAGTCTTTCTGGCCACACG | + |
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Preference number: 6 (lower is better) Translates to: LFNPGASTVIPH*YQLLVSLSGHT Trigger: CGTGTGGCCAGAAAGACTGACCAGAAGCTGGTAGCAGTGAGGGATGACAGTGCTTGCCCCTGGGTTGAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS TCA 72 bp | CAGGCCTTCAGCAGGTGGATAAGATGGGAGGAGTTCTaGAATACACACCCGGGATGCTCCAGAGGCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: QAFSRWIRWEEF*NTHPGCSRGQI Trigger: GATTTGGCCTCTGGAGCATCCCGGGTGTGTATTTCAGAACTCCTCCCATCTTATCCACCTGCTGAAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS TCA 72 bp | ACTGTCACGAGAGCAGCGTTCAGGAAACCACCTCCATaGTTCAATTACCTCCACCTGGTCCCGCCCATGACA | + |
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Preference number: 6 (lower is better) Translates to: TVTRAAFRKPPP*FNYLHLVPPMT Trigger: TGTCATGGGCGGGACCAGGTGGAGGTAATTGAATCATGGAGGTGGTTTCCTGAACGCTGCTCTCGTGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS TCA 72 bp | GCCTCAGGAAGCTTACAATCATGGAGGCAGTTCACGTaGAGGGGGAAGAAAGGCACCTTTCTCACAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASGSLQSWRQFT*RGKKGTFLTGW Trigger: CCACCCTGTGAGAAAGGTGCCTTTCTTCCCCCTTCACGTGAACTGCCTCCATGATTGTAAGCTTCCTGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS TCA 72 bp | AAACCACTCTCTTCTTGGATAGTTGGCTCCCAGACTTaGAGGCTGTGCTCCTTGCTGTCCTCGGACCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KPLSSWIVGSQT*RLCSLLSSDLS Trigger: GGAGAGGTCCGAGGACAGCAAGGAGCACAGCCTTCAAGTCTGGGAGCCAACTATCCAAGAAGAGAGTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CAA 72 bp | CAAACCACTCTCTTCTTGGATAGTTGGCTCCCAGACTaGAAGGCTGTGCTCCTTGCTGTCCTCGGACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: QTTLFLDSWLPD*KAVLLAVLGPL Trigger: GAGAGGTCCGAGGACAGCAAGGAGCACAGCCTTCAAGTCTGGGAGCCAACTATCCAAGAAGAGAGTGGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CCA 72 bp | GCTTCCGCAGCTCAAAAGGAGAAACATGCTTTGCGCTaGAGTCCTCAGAAAAGGCCACTTCCAAACTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ASAAQKEKHALR*SPQKRPLPNCG Trigger: CCCACAGTTTGGAAGTGGCCTTTTCTGAGGACTCCAGCGCAAAGCATGTTTCTCCTTTTGAGCTGCGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS CCA 72 bp | GAGAGACCTCAACTTGCTTTCCTAGATGGGACGTGGTaGCCCACGGCATCCATAGCAAACCACTCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ERPQLAFLDGTW*PTASIANHSLL Trigger: AAGAAGAGAGTGGTTTGCTATGGATGCCGTGGGCCACCACGTCCCATCTAGGAAAGCAAGTTGAGGTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CCA 72 bp | CAAGAGAGACCTCAACTTGCTTTCCTAGATGGGACGTaGTGGCCCACGGCATCCATAGCAAACCACTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: QERPQLAFLDGT*WPTASIANHSL Trigger: AAGAGAGTGGTTTGCTATGGATGCCGTGGGCCACCACGTCCCATCTAGGAAAGCAAGTTGAGGTCTCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CAA 72 bp | CCCAATCACCCTTCTGAGTTTCAGGTGCACACCCTGTaGCTTTGGTGTGACTGCTTCCCGTTGGGTTATCCT | + |
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Preference number: 6 (lower is better) Translates to: PNHPSEFQVHTL*LWCDCFPLGYP Trigger: AGGATAACCCAACGGGAAGCAGTCACACCAAAGCAACAGGGTGTGCACCTGAAACTCAGAAGGGTGATTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS GCA 72 bp | GCAAGGCTTCCGCAGCTCAAAAGGAGAAACATGCTTTaGGCTGGAGTCCTCAGAAAAGGCCACTTCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: ARLPQLKRRNML*AGVLRKGHFQT Trigger: AGTTTGGAAGTGGCCTTTTCTGAGGACTCCAGCGCAAAGCATGTTTCTCCTTTTGAGCTGCGGAAGCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS GCA 72 bp | AACAAGCAAGGCTTCCGCAGCTCAAAAGGAGAAACATaGTTTGCGCTGGAGTCCTCAGAAAAGGCCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: NKQGFRSSKGET*FALESSEKATS Trigger: GGAAGTGGCCTTTTCTGAGGACTCCAGCGCAAAGCATGTTTCTCCTTTTGAGCTGCGGAAGCCTTGCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS CCA 72 bp | CCCTACTTCTCTTCCTCAGTTGCTTCATCAATCACATaGGGCTGGGGCAGTGAGGAGGATGTATTTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PYFSSSVASSIT*GWGSEEDVFAS Trigger: TGAGGCAAATACATCCTCCTCACTGCCCCAGCCCCATGTGATTGATGAAGCAACTGAGGAAGAGAAGTAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS TCA 72 bp | TGGAGGATTGAGTGGCAAGCCAAGATTCAGATATGGTaGCTGATAGAAGCAGTGAAGGTCTCTTCTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: WRIEWQAKIQIW*LIEAVKVSSPG Trigger: CCCGGGAGAAGAGACCTTCACTGCTTCTATCAGTCACCATATCTGAATCTTGGCTTGCCACTCAATCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580908.2 |
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| CDS CCA 72 bp | ATGTATTCAAGAGAGACCTCAACTTGCTTTCCTAGATaGGACGTGGTGGCCCACGGCATCCATAGCAAACCA | + |
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Preference number: 6 (lower is better) Translates to: MYSRETSTCFPR*DVVAHGIHSKP Trigger: TGGTTTGCTATGGATGCCGTGGGCCACCACGTCCCATCTAGGAAAGCAAGTTGAGGTCTCTCTTGAATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CAA 72 bp | CTTCCCGTTGGGTTATCCTTGGGCACCTCACACTCATaGTGTCCAAAGCAGAATTCTTCATCCTCAACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LPVGLSLGTSHS*CPKQNSSSSTL Trigger: CAGAGTTGAGGATGAAGAATTCTGCTTTGGACACAATGAGTGTGAGGTGCCCAAGGATAACCCAACGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS TCA 72 bp | TGGAGGATTGAGTGGCAAGCCAAGATTCAGATATGGTaGCTGATAGAAGCAGTGAAGGTCTATTCCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: WRIEWQAKIQIW*LIEAVKVYSQS Trigger: GGACTGGGAATAGACCTTCACTGCTTCTATCAGTCACCATATCTGAATCTTGGCTTGCCACTCAATCCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649879.1 |
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| CDS CAA 72 bp | GAGATCACTGGAGAGACAGATGGAGAAGTGGAGGATTaGTATTTAGAGTCTAGTCAGGGAAACACACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: EITGETDGEVED*YLESSQGNTPP Trigger: GGGAGGTGTGTTTCCCTGACTAGACTCTAAATACAAATCCTCCACTTCTCCATCTGTCTCTCCAGTGATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580908.2 ENST00000649879.1 |
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| CDS CCA 72 bp | ATAAAGCAGTTTAATTGGCTCACAGTTCCTTATAGCTaGGGAGGCCTCAGGAAGCTTACAATCATGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IKQFNWLTVPYS*GGLRKLTIMEA Trigger: TGCCTCCATGATTGTAAGCTTCCTGAGGCCTCCCCAGCTATAAGGAACTGTGAGCCAATTAAACTGCTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412122.3 |
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| CDS TCA 72 bp | GAGAGAATCTCCTGTTGTTGGTCGATATTGGAGGATTaGGTGGCAAGCCAAGATTCAGATATGGTGACTGAT | + |
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Preference number: 6 (lower is better) Translates to: ERISCCWSILED*VASQDSDMVTD Trigger: ATCAGTCACCATATCTGAATCTTGGCTTGCCACTCAATCCTCCAATATCGACCAACAACAGGAGATTCTCTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580908.2 ENST00000649879.1 |
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| CDS TCA 72 bp | ACTCACTCTCATGCTTTTAATGAATTCATTTATGGGTaGTCAGGAATCTTCACCATAGCCCAATCACCCTTC | + |
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Preference number: 6 (lower is better) Translates to: THSHAFNEFIYG*SGIFTIAQSPF Trigger: GAAGGGTGATTGGGCTATGGTGAAGATTCCTGATCACCCATAAATGAATTCATTAAAAGCATGAGAGTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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| CDS CAA 72 bp | GAATTCTTCATCCTCAACTCTGCACTCATCCTATATTaGAGACTCCTAACTCAGTTAATCGCATTGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: EFFILNSALILY*RLLTQLIALLQ Trigger: CTGAAGCAATGCGATTAACTGAGTTAGGAGTCTCAAATATAGGATGAGTGCAGAGTTGAGGATGAAGAATTC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580908.2 ENST00000648648.1 ENST00000649879.1 ENST00000650007.1 |
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