Pregenerated sensors for LINC00051 (Homo sapiens)
Ensembl gene IDs: ENSG00000254008Ensembl transcript IDs: ENST00000517704.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCCAACGCACTCGCTCTTGGGAGAAGAGAACCTGGGCCTCAGAGTaGGGCAGCAGCCGGACAGGAGAGAGGCAGGGGCTTGCTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: TQRTRSWEKRTWASE*GSSRTGERQGLAAG Trigger: CCCAGCAGCAAGCCCCTGCCTCTCTCCTGTCCGGCTGCTGCCCCACTCTGAGGCCCAGGTTCTCTTCTCCCAAGAGCGAGTGCGTTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 90 bp | CCAACTCAGCCCCCAGGGCAGCAGAGCCATTCCTGTGACCCCTGGTaGAAACATTCCTGCACTGGGCATTATCTTGGGCAGTCCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PTQPPGQQSHSCDPW*KHSCTGHYLGQSLG Trigger: GCCCAGGGACTGCCCAAGATAATGCCCAGTGCAGGAATGTTTCCACCAGGGGTCACAGGAATGGCTCTGCTGCCCTGGGGGCTGAGTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 90 bp | TGGCCAACTCAGCCCCCAGGGCAGCAGAGCCATTCCTGTGACCCCTaGTGGAAACATTCCTGCACTGGGCATTATCTTGGGCAGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: WPTQPPGQQSHSCDP*WKHSCTGHYLGQSL Trigger: CAGGGACTGCCCAAGATAATGCCCAGTGCAGGAATGTTTCCACCAGGGGTCACAGGAATGGCTCTGCTGCCCTGGGGGCTGAGTTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 90 bp | GATTCCCCAGCCACTGCCTTCATGCTGCTTTGCTTGTTAACTTGGTaGCACCAGACAGGTGGCCAACTCAGCCCCCAGGGCAGCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: DSPATAFMLLCLLTW*HQTGGQLSPQGSRA Trigger: GGCTCTGCTGCCCTGGGGGCTGAGTTGGCCACCTGTCTGGTGCCACCAAGTTAACAAGCAAAGCAGCATGAAGGCAGTGGCTGGGGAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS TCA 90 bp | AGACAGGTGGCCAACTCAGCCCCCAGGGCAGCAGAGCCATTCCTGTaGCCCCTGGTGGAAACATTCCTGCACTGGGCATTATCTTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RQVANSAPRAAEPFL*PLVETFLHWALSWA Trigger: TGCCCAAGATAATGCCCAGTGCAGGAATGTTTCCACCAGGGGTCACAGGAATGGCTCTGCTGCCCTGGGGGCTGAGTTGGCCACCTGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 90 bp | TGCCTTCATGCTGCTTTGCTTGTTAACTTGGTGGCACCAGACAGGTaGCCAACTCAGCCCCCAGGGCAGCAGAGCCATTCCTGTGACCCC | + |
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Preference number: 5 (lower is better) Translates to: CLHAALLVNLVAPDR*PTQPPGQQSHSCDP Trigger: GGGGTCACAGGAATGGCTCTGCTGCCCTGGGGGCTGAGTTGGCCACCTGTCTGGTGCCACCAAGTTAACAAGCAAAGCAGCATGAAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS TCA 90 bp | GAGTCAAACCATCACTCTGAGGCTTTCAGGCTTGGAGGTCCCTCCTaGATGGGGTTGTGGTGTCTTCCACTGGACATCATGGTAACACAG | + |
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Preference number: 5 (lower is better) Translates to: ESNHHSEAFRLGGPS*MGLWCLPLDIMVTQ Trigger: CTGTGTTACCATGATGTCCAGTGGAAGACACCACAACCCCATTCAGGAGGGACCTCCAAGCCTGAAAGCCTCAGAGTGATGGTTTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS TCA 90 bp | TCCAAGGTCCAGGGACCGGCATCTTTCAAGAGCCTTCTTGCTCCATaGTCTTATGGCAGAAGGACAAGAGCACATGTGAGAAAGAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: SKVQGPASFKSLLAP*SYGRRTRAHVRKRE Trigger: TTCCCTCTTTCTCACATGTGCTCTTGTCCTTCTGCCATAAGATCATGGAGCAAGAAGGCTCTTGAAAGATGCCGGTCCCTGGACCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 90 bp | GGACATCATGGTAACACAGCTGTATCCAGGAGATCCTCTGGGTTGTaGGCACTCTCTTCATGTGGTTCTTCAGGCCTCCTATCCTTGATA | + |
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Preference number: 5 (lower is better) Translates to: GHHGNTAVSRRSSGL*ALSSCGSSGLLSLI Trigger: TATCAAGGATAGGAGGCCTGAAGAACCACATGAAGAGAGTGCCCACAACCCAGAGGATCTCCTGGATACAGCTGTGTTACCATGATGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 90 bp | CCAGGGACCGGCATCTTTCAAGAGCCTTCTTGCTCCATGATCTTATaGCAGAAGGACAAGAGCACATGTGAGAAAGAGGGAAAGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: PGTGIFQEPSCSMIL*QKDKSTCEKEGKAV Trigger: TACAGCCTTTCCCTCTTTCTCACATGTGCTCTTGTCCTTCTGCCATAAGATCATGGAGCAAGAAGGCTCTTGAAAGATGCCGGTCCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS TCA 90 bp | GCCTTCTTGCTCCATGATCTTATGGCAGAAGGACAAGAGCACATGTaGGAAAGAGGGAAAGGCTGTACCCATTCTCTCATCAGGAACCCA | + |
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Preference number: 5 (lower is better) Translates to: AFLLHDLMAEGQEHM*ERGKGCTHSLIRNP Trigger: TGGGTTCCTGATGAGAGAATGGGTACAGCCTTTCCCTCTTTCTCACATGTGCTCTTGTCCTTCTGCCATAAGATCATGGAGCAAGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CAA 72 bp | TCCAGATGGGGTGACCTTGACCCAACGCACTCGCTCTaGGGAGAAGAGAACCTGGGCCTCAGAGTGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SRWGDLDPTHSL*GEENLGLRVGQ Trigger: CTGCCCCACTCTGAGGCCCAGGTTCTCTTCTCCCAAGAGCGAGTGCGTTGGGTCAAGGTCACCCCATCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 72 bp | CAGCCCCCAGGGCAGCAGAGCCATTCCTGTGACCCCTaGTGGAAACATTCCTGCACTGGGCATTATCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: QPPGQQSHSCDP*WKHSCTGHYLG Trigger: CCCAAGATAATGCCCAGTGCAGGAATGTTTCCACCAGGGGTCACAGGAATGGCTCTGCTGCCCTGGGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 72 bp | GCTGCTTTGCTTGTTAACTTGGTGGCACCAGACAGGTaGCCAACTCAGCCCCCAGGGCAGCAGAGCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: AALLVNLVAPDR*PTQPPGQQSHS Trigger: GGAATGGCTCTGCTGCCCTGGGGGCTGAGTTGGCCACCTGTCTGGTGCCACCAAGTTAACAAGCAAAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 72 bp | GCCACTGCCTTCATGCTGCTTTGCTTGTTAACTTGGTaGCACCAGACAGGTGGCCAACTCAGCCCCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ATAFMLLCLLTW*HQTGGQLSPQG Trigger: GCCCTGGGGGCTGAGTTGGCCACCTGTCTGGTGCCACCAAGTTAACAAGCAAAGCAGCATGAAGGCAGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 72 bp | CCAGCCACTGCCTTCATGCTGCTTTGCTTGTTAACTTaGTGGCACCAGACAGGTGGCCAACTCAGCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PATAFMLLCLLT*WHQTGGQLSPQ Trigger: CTGGGGGCTGAGTTGGCCACCTGTCTGGTGCCACCAAGTTAACAAGCAAAGCAGCATGAAGGCAGTGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CAA 72 bp | CCCAGCCACTGCCTTCATGCTGCTTTGCTTGTTAACTaGGTGGCACCAGACAGGTGGCCAACTCAGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSHCLHAALLVN*VAPDRWPTQPP Trigger: TGGGGGCTGAGTTGGCCACCTGTCTGGTGCCACCAAGTTAACAAGCAAAGCAGCATGAAGGCAGTGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS GCA 72 bp | CAGAGCCATTCCTGTGACCCCTGGTGGAAACATTCCTaGACTGGGCATTATCTTGGGCAGTCCCTGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QSHSCDPWWKHS*TGHYLGQSLGS Trigger: TGAGCCCAGGGACTGCCCAAGATAATGCCCAGTGCAGGAATGTTTCCACCAGGGGTCACAGGAATGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CAA 72 bp | GGTGTGAGTCAAACCATCACTCTGAGGCTTTCAGGCTaGGAGGTCCCTCCTGAATGGGGTTGTGGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GVSQTITLRLSG*EVPPEWGCGVF Trigger: GAAGACACCACAACCCCATTCAGGAGGGACCTCCAAGCCTGAAAGCCTCAGAGTGATGGTTTGACTCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS TCA 72 bp | CAGGAACCCACTCCCTCAACAATGACAATCCATTCATaGGGGCAGAGCCATCAGCACCTAATCACCCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: QEPTPSTMTIHS*GQSHQHLITLA Trigger: CGCAAGGGTGATTAGGTGCTGATGGCTCTGCCCTCATGAATGGATTGTCATTGTTGAGGGAGTGGGTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CAA 90 bp | TTTACTGGTGGTGTGAGTCAAACCATCACTCTGAGGCTTTCAGGCTaGGAGGTCCCTCCTGAATGGGGTTGTGGTGTCTTCCACTGGACA | + |
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Preference number: 6 (lower is better) Translates to: FTGGVSQTITLRLSG*EVPPEWGCGVFHWT Trigger: TGTCCAGTGGAAGACACCACAACCCCATTCAGGAGGGACCTCCAAGCCTGAAAGCCTCAGAGTGATGGTTTGACTCACACCACCAGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS TCA 72 bp | ACCCATTCTCTCATCAGGAACCCACTCCCTCAACAATaGCAATCCATTCATGAGGGCAGAGCCATCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: THSLIRNPLPQQ*QSIHEGRAIST Trigger: GGTGCTGATGGCTCTGCCCTCATGAATGGATTGTCATTGTTGAGGGAGTGGGTTCCTGATGAGAGAATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CCA 72 bp | CAGGAGATCCTCTGGGTTGTGGGCACTCTCTTCATGTaGTTCTTCAGGCCTCCTATCCTTGATAATCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: QEILWVVGTLFM*FFRPPILDNQG Trigger: ACCCTGATTATCAAGGATAGGAGGCCTGAAGAACCACATGAAGAGAGTGCCCACAACCCAGAGGATCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS TCA 72 bp | CAGGGACCGGCATCTTTCAAGAGCCTTCTTGCTCCATaGTCTTATGGCAGAAGGACAAGAGCACATGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QGPASFKSLLAP*SYGRRTRAHVR Trigger: TCTCACATGTGCTCTTGTCCTTCTGCCATAAGATCATGGAGCAAGAAGGCTCTTGAAAGATGCCGGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS GCA 72 bp | TTCATGAGGGCAGAGCCATCAGCACCTAATCACCCTTaGGATAGTGTTGAAAGGTCCCACCATTCAACACTA | + |
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Preference number: 6 (lower is better) Translates to: FMRAEPSAPNHP*DSVERSHHSTL Trigger: TAGTGTTGAATGGTGGGACCTTTCAACACTATCGCAAGGGTGATTAGGTGCTGATGGCTCTGCCCTCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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| CDS CAA 72 bp | CAGAGCCATCAGCACCTAATCACCCTTGCGATAGTGTaGAAAGGTCCCACCATTCAACACTATTGCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: QSHQHLITLAIV*KGPTIQHYCIC Trigger: ACAAATGCAATAGTGTTGAATGGTGGGACCTTTCAACACTATCGCAAGGGTGATTAGGTGCTGATGGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517704.1 |
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